BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Forsythia21_contig00011904
         (1856 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_011096256.1| PREDICTED: RNA polymerase-associated protein...   814   0.0  
ref|XP_012849060.1| PREDICTED: protein RTF1 homolog [Erythranthe...   761   0.0  
gb|EYU27933.1| hypothetical protein MIMGU_mgv1a003121mg [Erythra...   716   0.0  
ref|XP_009623037.1| PREDICTED: RNA polymerase-associated protein...   688   0.0  
ref|XP_006347073.1| PREDICTED: RNA polymerase-associated protein...   687   0.0  
ref|XP_009799534.1| PREDICTED: RNA polymerase-associated protein...   686   0.0  
ref|XP_004232840.1| PREDICTED: RNA polymerase-associated protein...   686   0.0  
ref|XP_002519028.1| RNA polymerase-associated protein RTF1, puta...   677   0.0  
ref|XP_010646904.1| PREDICTED: RNA polymerase-associated protein...   674   0.0  
emb|CDO99584.1| unnamed protein product [Coffea canephora]            673   0.0  
ref|XP_012091565.1| PREDICTED: RNA polymerase-associated protein...   663   0.0  
ref|XP_007025691.1| PAF1 complex component isoform 1 [Theobroma ...   657   0.0  
ref|XP_012455370.1| PREDICTED: RNA polymerase-associated protein...   655   0.0  
ref|XP_003529309.1| PREDICTED: RNA polymerase-associated protein...   653   0.0  
ref|XP_008453742.1| PREDICTED: RNA polymerase-associated protein...   652   0.0  
ref|XP_004149150.1| PREDICTED: RNA polymerase-associated protein...   647   0.0  
ref|XP_003542767.1| PREDICTED: RNA polymerase-associated protein...   647   0.0  
ref|XP_007159299.1| hypothetical protein PHAVU_002G226300g [Phas...   645   0.0  
ref|XP_008228301.1| PREDICTED: LOW QUALITY PROTEIN: RNA polymera...   644   0.0  
gb|EPS59875.1| hypothetical protein M569_14929 [Genlisea aurea]       643   0.0  

>ref|XP_011096256.1| PREDICTED: RNA polymerase-associated protein RTF1 homolog [Sesamum
            indicum]
          Length = 627

 Score =  814 bits (2102), Expect = 0.0
 Identities = 431/574 (75%), Positives = 460/574 (80%)
 Frame = -3

Query: 1854 RKPSGSQVPLKKRLDPVERDNDGXXXXXXXXXXXXXXXXXXXXSVGSDLYKDEDDREKLS 1675
            RKPSGSQVPLKKRLDP +RD+D                     SVGSDLYKDEDDREKLS
Sbjct: 57   RKPSGSQVPLKKRLDPADRDDDRSSQEGDEDDDYDHERDSDNDSVGSDLYKDEDDREKLS 116

Query: 1674 KLTELEREMILEARATKRSDRDLTEKLKKRKGQDRKGSHPTPPTRSMRSKAERAGALDEL 1495
            KLTELEREMILEARATKRSDRDLTEKLKKRKGQDRKGS P   TR+MRSKAERAGALDEL
Sbjct: 117  KLTELEREMILEARATKRSDRDLTEKLKKRKGQDRKGSPPKAHTRNMRSKAERAGALDEL 176

Query: 1494 VKXXXXXXXXXXXXRYSPVKRRSFATTTFNXXXXXXXXXXXXXXXXXXXXGMADSDDEKT 1315
            VK            RYSPVKRRSF   T +                     MADSDD+KT
Sbjct: 177  VKRRRDAAKGGSGSRYSPVKRRSFTAATLSSPSRSESGSHSDGESTGDGG-MADSDDDKT 235

Query: 1314 SESKTPTFEDIKEITIRRSKLAKWFMEPFFDELIVGCFVRVGIGKSRSGPIYRLCMVRNV 1135
            SESK PT+EDI+EITIRRSKLAKWFMEPFFDELIVGCFVRVGIGKSRSGPIYRLC+VRNV
Sbjct: 236  SESKVPTYEDIREITIRRSKLAKWFMEPFFDELIVGCFVRVGIGKSRSGPIYRLCVVRNV 295

Query: 1134 DATEPDRQYKLDNKTTYKYLNVVWGNESSAARWQMAMISDSSPLKEEFEQWVREVERSDG 955
            DAT+PD+QYKLDNKTTYKYLNVVWGNE+SAARWQMAMISDS P KEEF+QWVREVERS G
Sbjct: 296  DATDPDKQYKLDNKTTYKYLNVVWGNETSAARWQMAMISDSPPTKEEFDQWVREVERSGG 355

Query: 954  HMLSKQEVLEKRDAIQKTNTFVYSAATVKQMLQEKKSATWRPLNVAAEKDRLRRELEVAK 775
            HM +KQEVLEK++AIQKTN+FVYSAATVKQMLQEKKSATWRPLNVAAEKDRLRR LEVAK
Sbjct: 356  HMPTKQEVLEKKEAIQKTNSFVYSAATVKQMLQEKKSATWRPLNVAAEKDRLRRALEVAK 415

Query: 774  MRDDEVEVERIKARLQELEESRQTQGNDSKAIRLAEMNKRNRVENFKNASEKRPVNTSLK 595
              +DE EVER+KARLQELE SRQ Q  DSKA++LAEMN+RNRVENF+NASE +PVNTSLK
Sbjct: 416  ENEDEAEVERLKARLQELEASRQPQEKDSKAVKLAEMNRRNRVENFRNASELKPVNTSLK 475

Query: 594  AGEAGYDPFSRRWTRSRNYYLSNSGGDEAAVETNGDASAVLEVANINVGVEXXXXXXXXX 415
            AGEAGYDPFSRRWTRSRNYY++NS G EAA ETNGDASA L     N G           
Sbjct: 476  AGEAGYDPFSRRWTRSRNYYVANSNGGEAAGETNGDASAAL--PGSNGGGRVSAEAGVAA 533

Query: 414  XXXXXXXXXXXGKLVDTRAPVDQGTESNLLHNFELPISLAVLQKFGGAQGSQAGFMARKQ 235
                       GKLVDT APVDQGTESN+LHNFELPISLA LQKFGG QG+QAGFMARKQ
Sbjct: 534  TAAALEAAAGAGKLVDTSAPVDQGTESNMLHNFELPISLAALQKFGGPQGAQAGFMARKQ 593

Query: 234  RMEATVGCTVPENDGRRHALTLTVSDYKRRRGLL 133
            R+EAT+G  VPENDGRRHALTLTVSDYKRRRGLL
Sbjct: 594  RIEATLGVKVPENDGRRHALTLTVSDYKRRRGLL 627


>ref|XP_012849060.1| PREDICTED: protein RTF1 homolog [Erythranthe guttatus]
          Length = 623

 Score =  761 bits (1965), Expect = 0.0
 Identities = 415/583 (71%), Positives = 449/583 (77%), Gaps = 9/583 (1%)
 Frame = -3

Query: 1854 RKPSGSQVPLKKRLDPVERDNDGXXXXXXXXXXXXXXXXXXXXSVGSDLYKDEDDREKLS 1675
            RKPSGSQVPLKKRLD  +RD D                     SVGSDLYKDEDDREKLS
Sbjct: 57   RKPSGSQVPLKKRLDATDRDED-RSSQEGDEDEYDHDRDSDNDSVGSDLYKDEDDREKLS 115

Query: 1674 KLTELEREMILEARATKRSDRDLTEKLKKRKGQDRKGSHPTPP-TRSMRSKAERAGALDE 1498
            KLTELEREMILEARATKRSDRDLTEKLKKRKGQDRKGS P    TR+MRSKA+RAGALDE
Sbjct: 116  KLTELEREMILEARATKRSDRDLTEKLKKRKGQDRKGSSPPKTHTRNMRSKAQRAGALDE 175

Query: 1497 LVKXXXXXXXXXXXXRYSPVKRRSFA-----TTTFNXXXXXXXXXXXXXXXXXXXXGMAD 1333
            LVK            RYSPVKRRSFA     TT  +                    G+ D
Sbjct: 176  LVKRRRDAAKGGSGGRYSPVKRRSFAAAAATTTALSSPSRSDSGSHSDDGDSTGDGGLGD 235

Query: 1332 SDDEKTSESKTPTFEDIKEITIRRSKLAKWFMEPFFDELIVGCFVRVGIGKSRSGPIYRL 1153
            SDD+K S SK PTFEDIKEITIRRSKL+KWFMEPFFDELIVGCFVRVGIGKSRSG IYRL
Sbjct: 236  SDDDKVS-SKVPTFEDIKEITIRRSKLSKWFMEPFFDELIVGCFVRVGIGKSRSGSIYRL 294

Query: 1152 CMVRNVDATEPDRQYKLDNKTTYKYLNVVWGNESSAARWQMAMISDSSPLKEEFEQWVRE 973
            C+VRNVDAT+PDR+YKLDNKTT K+LNVVWG+ESSAARWQMAM+SDS+P +EEF+QWV+E
Sbjct: 295  CVVRNVDATDPDRKYKLDNKTTSKWLNVVWGSESSAARWQMAMVSDSAPQREEFDQWVKE 354

Query: 972  VERSDGHMLSKQEVLEKRDAIQKTNTFVYSAATVKQMLQEKKSATWRPLNVAAEKDRLRR 793
            VER+ GHM +KQEV+EKRDAIQ+TNTFVYSAATVKQMLQEKKSATWRPLNVAAEKDRLRR
Sbjct: 355  VERNGGHMPTKQEVMEKRDAIQRTNTFVYSAATVKQMLQEKKSATWRPLNVAAEKDRLRR 414

Query: 792  ELEVAKMRDDEVEVERIKARLQELEESRQTQGNDSKAIRLAEMNKRNRVENFKNASEKRP 613
             LEVAK  +D+ EVERIKARLQELE SRQ    +SKA++LAEMN++NRVENFKNASE +P
Sbjct: 415  SLEVAKENEDDAEVERIKARLQELESSRQALEKNSKAVKLAEMNRKNRVENFKNASEMKP 474

Query: 612  VNTSLKAGEAGYDPFSRRWTRSRNYYLSNSGGD---EAAVETNGDASAVLEVANINVGVE 442
            V   LKAGEAGYDPFSRRWTRSRNYY+ NSGG    E AVETNG   A L          
Sbjct: 475  VTIGLKAGEAGYDPFSRRWTRSRNYYVGNSGGGVEAEVAVETNGGGGAALP--------- 525

Query: 441  XXXXXXXXXXXXXXXXXXXXGKLVDTRAPVDQGTESNLLHNFELPISLAVLQKFGGAQGS 262
                                GKLVDT APVDQGTESNLLHNFELPISLAVLQKFGG QG+
Sbjct: 526  -----GLAATEAALVAAAGAGKLVDTMAPVDQGTESNLLHNFELPISLAVLQKFGGPQGT 580

Query: 261  QAGFMARKQRMEATVGCTVPENDGRRHALTLTVSDYKRRRGLL 133
            QAGFMARKQR+EAT+G  VPENDGRRHALTL+VSDYKRRRGLL
Sbjct: 581  QAGFMARKQRIEATLGVKVPENDGRRHALTLSVSDYKRRRGLL 623


>gb|EYU27933.1| hypothetical protein MIMGU_mgv1a003121mg [Erythranthe guttata]
          Length = 606

 Score =  716 bits (1849), Expect = 0.0
 Identities = 398/583 (68%), Positives = 432/583 (74%), Gaps = 9/583 (1%)
 Frame = -3

Query: 1854 RKPSGSQVPLKKRLDPVERDNDGXXXXXXXXXXXXXXXXXXXXSVGSDLYKDEDDREKLS 1675
            RKPSGSQVPLKKRLD  +RD D                     SVGSDLYKDEDDREKLS
Sbjct: 57   RKPSGSQVPLKKRLDATDRDED-RSSQEGDEDEYDHDRDSDNDSVGSDLYKDEDDREKLS 115

Query: 1674 KLTELEREMILEARATKRSDRDLTEKLKKRKGQDRKGSHPTPP-TRSMRSKAERAGALDE 1498
            KLTELEREMILEARATKRSDRDLTEKLKKRKGQDRKGS P    TR+MRSKA+RAGALDE
Sbjct: 116  KLTELEREMILEARATKRSDRDLTEKLKKRKGQDRKGSSPPKTHTRNMRSKAQRAGALDE 175

Query: 1497 LVKXXXXXXXXXXXXRYSPVKRRSFA-----TTTFNXXXXXXXXXXXXXXXXXXXXGMAD 1333
            LVK            RYSPVKRRSFA     TT  +                    G+ D
Sbjct: 176  LVKRRRDAAKGGSGGRYSPVKRRSFAAAAATTTALSSPSRSDSGSHSDDGDSTGDGGLGD 235

Query: 1332 SDDEKTSESKTPTFEDIKEITIRRSKLAKWFMEPFFDELIVGCFVRVGIGKSRSGPIYRL 1153
            SDD+K S SK PTFEDIKEITIRRSKL+KWFMEPFFDELIVGCFVRVGIGKSRSG IYRL
Sbjct: 236  SDDDKVS-SKVPTFEDIKEITIRRSKLSKWFMEPFFDELIVGCFVRVGIGKSRSGSIYRL 294

Query: 1152 CMVRNVDATEPDRQYKLDNKTTYKYLNVVWGNESSAARWQMAMISDSSPLKEEFEQWVRE 973
            C+VRNVDAT+PDR+YKLDNKTT K+LNVVWG+ESSAARWQMAM+SDS+P +EEF+QWV+E
Sbjct: 295  CVVRNVDATDPDRKYKLDNKTTSKWLNVVWGSESSAARWQMAMVSDSAPQREEFDQWVKE 354

Query: 972  VERSDGHMLSKQEVLEKRDAIQKTNTFVYSAATVKQMLQEKKSATWRPLNVAAEKDRLRR 793
            VER+ GHM +KQEV+EKRDAIQ+TNTFVYSAATVKQMLQEKK                 R
Sbjct: 355  VERNGGHMPTKQEVMEKRDAIQRTNTFVYSAATVKQMLQEKK-----------------R 397

Query: 792  ELEVAKMRDDEVEVERIKARLQELEESRQTQGNDSKAIRLAEMNKRNRVENFKNASEKRP 613
             LEVAK  +D+ EVERIKARLQELE SRQ    +SKA++LAEMN++NRVENFKNASE +P
Sbjct: 398  SLEVAKENEDDAEVERIKARLQELESSRQALEKNSKAVKLAEMNRKNRVENFKNASEMKP 457

Query: 612  VNTSLKAGEAGYDPFSRRWTRSRNYYLSNSGGD---EAAVETNGDASAVLEVANINVGVE 442
            V   LKAGEAGYDPFSRRWTRSRNYY+ NSGG    E AVETNG   A L          
Sbjct: 458  VTIGLKAGEAGYDPFSRRWTRSRNYYVGNSGGGVEAEVAVETNGGGGAALP--------- 508

Query: 441  XXXXXXXXXXXXXXXXXXXXGKLVDTRAPVDQGTESNLLHNFELPISLAVLQKFGGAQGS 262
                                GKLVDT APVDQGTESNLLHNFELPISLAVLQKFGG QG+
Sbjct: 509  -----GLAATEAALVAAAGAGKLVDTMAPVDQGTESNLLHNFELPISLAVLQKFGGPQGT 563

Query: 261  QAGFMARKQRMEATVGCTVPENDGRRHALTLTVSDYKRRRGLL 133
            QAGFMARKQR+EAT+G  VPENDGRRHALTL+VSDYKRRRGLL
Sbjct: 564  QAGFMARKQRIEATLGVKVPENDGRRHALTLSVSDYKRRRGLL 606


>ref|XP_009623037.1| PREDICTED: RNA polymerase-associated protein RTF1 homolog [Nicotiana
            tomentosiformis]
          Length = 654

 Score =  688 bits (1775), Expect = 0.0
 Identities = 379/600 (63%), Positives = 436/600 (72%), Gaps = 26/600 (4%)
 Frame = -3

Query: 1854 RKPSGSQVPLKKRLDPVERDND--GXXXXXXXXXXXXXXXXXXXXSVGSDLYKDEDDREK 1681
            RK SGSQVPLKKRLDP ERD+D                       S+GSDLYKDE+DR+K
Sbjct: 57   RKLSGSQVPLKKRLDPPERDDDRSSHGEGDDDGDGYGDERDSDDDSIGSDLYKDEEDRQK 116

Query: 1680 LSKLTELEREMILEARATKRSDRDLTEKLK---KRKGQDRKGSHPTPPTRSMRSK----- 1525
            L+++TEL+REMIL  RA+K+SDR L EK+    K + Q RK S P   +R MRS      
Sbjct: 117  LAQMTELDREMILTDRASKKSDRSLQEKISGKIKNRSQPRKPSSPPSHSRGMRSSTRALD 176

Query: 1524 --AERAGALDELV-------------KXXXXXXXXXXXXRYSPVKRRSFATTTF-NXXXX 1393
              A+R  AL+E+              K             YSPVKRRSF      +    
Sbjct: 177  RAADRDDALNEIRAKRARQQDPEGNWKLRDAGRKGSGGRGYSPVKRRSFTAAALGSSPTR 236

Query: 1392 XXXXXXXXXXXXXXXXGMADSDDEKTSESKTPTFEDIKEITIRRSKLAKWFMEPFFDELI 1213
                            GM DSDD+K+ ES+ PTFEDIKEITIRRSKLAKWFMEPFFDELI
Sbjct: 237  GESDSRSNEGDSSGDDGMDDSDDDKSPESQLPTFEDIKEITIRRSKLAKWFMEPFFDELI 296

Query: 1212 VGCFVRVGIGKSRSGPIYRLCMVRNVDATEPDRQYKLDNKTTYKYLNVVWGNESSAARWQ 1033
            VGCFVRVGIG+SRSGPIYRLC+VRNVDAT+P+RQYKL+NKTT+K+LN+VWGN+SSAARWQ
Sbjct: 297  VGCFVRVGIGRSRSGPIYRLCIVRNVDATDPNRQYKLENKTTFKFLNLVWGNDSSAARWQ 356

Query: 1032 MAMISDSSPLKEEFEQWVREVERSDGHMLSKQEVLEKRDAIQKTNTFVYSAATVKQMLQE 853
            MAM+SDS PL++EF+QWV+EVERS G M SKQ+VLEK++AIQK+NTFVYSA TVKQMLQ+
Sbjct: 357  MAMVSDSPPLRDEFDQWVKEVERSGGRMPSKQDVLEKKEAIQKSNTFVYSADTVKQMLQQ 416

Query: 852  KKSATWRPLNVAAEKDRLRRELEVAKMRDDEVEVERIKARLQELEESRQTQGNDSKAIRL 673
            KKSATWRPLNVAAEKDRLRRE+EVAKM++DE EVE+IKARLQELE SR+ Q  D KA RL
Sbjct: 417  KKSATWRPLNVAAEKDRLRREMEVAKMKNDEAEVEKIKARLQELEASRKAQEKDDKARRL 476

Query: 672  AEMNKRNRVENFKNASEKRPVNTSLKAGEAGYDPFSRRWTRSRNYYLSNSGGDEAAVETN 493
            AEMN++NRVENFKNASE RPVN  LKAGEAGYDPFSRRWTRS NY+ + S  + A   +N
Sbjct: 477  AEMNRKNRVENFKNASELRPVNQLLKAGEAGYDPFSRRWTRSTNYF-AKSANEAAEGASN 535

Query: 492  GDASAVLEVANINVGVEXXXXXXXXXXXXXXXXXXXXGKLVDTRAPVDQGTESNLLHNFE 313
            G+A+A L V + N G                      GKLVDT APVD GTESN LH+F+
Sbjct: 536  GEAAAALAVVD-NNGAGGIADGGMEATAAALQAAAGAGKLVDTIAPVDLGTESNTLHDFD 594

Query: 312  LPISLAVLQKFGGAQGSQAGFMARKQRMEATVGCTVPENDGRRHALTLTVSDYKRRRGLL 133
            LPISLAVLQKFGG QGSQAGFMARKQR+EATVGC VPENDGRRHALTL+VSDYKRRRGLL
Sbjct: 595  LPISLAVLQKFGGPQGSQAGFMARKQRIEATVGCRVPENDGRRHALTLSVSDYKRRRGLL 654


>ref|XP_006347073.1| PREDICTED: RNA polymerase-associated protein RTF1 homolog [Solanum
            tuberosum]
          Length = 652

 Score =  687 bits (1772), Expect = 0.0
 Identities = 376/598 (62%), Positives = 437/598 (73%), Gaps = 24/598 (4%)
 Frame = -3

Query: 1854 RKPSGSQVPLKKRLDPVERDNDGXXXXXXXXXXXXXXXXXXXXSVGSDLYKDEDDREKLS 1675
            RK SGSQVPLKKRLDP ERD+D                     S+GSDLYKD+DDR+KL+
Sbjct: 57   RKLSGSQVPLKKRLDPQERDDD-HSSHGEGNDGDGYGNESDDDSIGSDLYKDDDDRQKLA 115

Query: 1674 KLTELEREMILEARATKRSDRDLTEKLKKRKGQDRKGSHPTPPTRSMRSK-------AER 1516
            ++TELEREMIL  RA K+SDR L +K+ K + Q RK S P   +R MRS        A+R
Sbjct: 116  QMTELEREMILTDRAAKKSDRSLHDKMIKDRAQPRKQSSPPSHSRGMRSSTRALDRAADR 175

Query: 1515 AGALDEL--------------VKXXXXXXXXXXXXRYSPVKRRSFATTTF-NXXXXXXXX 1381
              AL+E+               K             YSP+KRRSF   T  +        
Sbjct: 176  DDALNEIRAKRARQQQDPEGQFKLRDAARKGSGGRGYSPIKRRSFTAATLGSSPTRGESD 235

Query: 1380 XXXXXXXXXXXXGMADSDDEKTS-ESKTPTFEDIKEITIRRSKLAKWFMEPFFDELIVGC 1204
                        GM DSDD+K+S ES+ PTFEDIKEI+IRRSKLAKWFMEPFFDELIVGC
Sbjct: 236  SHSNEGDSSADDGMDDSDDDKSSPESQLPTFEDIKEISIRRSKLAKWFMEPFFDELIVGC 295

Query: 1203 FVRVGIGKSRSGPIYRLCMVRNVDATEPDRQYKLDNKTTYKYLNVVWGNESSAARWQMAM 1024
            FVRVGIG+SRSGPIYRLC+VRNVD+++P+RQYKL+NKTT K+LNVVWGNE+SAARWQMAM
Sbjct: 296  FVRVGIGRSRSGPIYRLCVVRNVDSSDPNRQYKLENKTTSKFLNVVWGNENSAARWQMAM 355

Query: 1023 ISDSSPLKEEFEQWVREVERSDGHMLSKQEVLEKRDAIQKTNTFVYSAATVKQMLQEKKS 844
            +SDS PL++EF+QWVREVERS G M SKQ+VLEK++AIQK+NTFVYSA TVKQMLQ+KKS
Sbjct: 356  VSDSPPLRDEFDQWVREVERSGGRMPSKQDVLEKKEAIQKSNTFVYSADTVKQMLQQKKS 415

Query: 843  ATWRPLNVAAEKDRLRRELEVAKMRDDEVEVERIKARLQELEESRQTQGNDSKAIRLAEM 664
            ATWRPLNVAAEKDRLRR++EVAKM++DE EVERIKARLQEL++SR+ Q  D KA RLAEM
Sbjct: 416  ATWRPLNVAAEKDRLRRDMEVAKMKNDEAEVERIKARLQELDDSRKVQEKDDKARRLAEM 475

Query: 663  NKRNRVENFKNASEKRPVNTSLKAGEAGYDPFSRRWTRSRNYYLSNSGGDEAAVETNGD- 487
            N++NRVENFKNASE RPVN  LKAG+AGYDPFSRRWTRS NY+ +    +EA   +NG+ 
Sbjct: 476  NRKNRVENFKNASELRPVNQLLKAGQAGYDPFSRRWTRSTNYF-AKGANEEAEGASNGEV 534

Query: 486  ASAVLEVANINVGVEXXXXXXXXXXXXXXXXXXXXGKLVDTRAPVDQGTESNLLHNFELP 307
            A+A    A  N G                      GKLVDT APVDQGTESN LH+F+LP
Sbjct: 535  AAAAALAAEDNNGASGTADGGMAATAAALQAAAGAGKLVDTNAPVDQGTESNTLHDFDLP 594

Query: 306  ISLAVLQKFGGAQGSQAGFMARKQRMEATVGCTVPENDGRRHALTLTVSDYKRRRGLL 133
            ISLAVLQKFGG+QG QAGFMARKQR+EATVGC+VPENDGRRHALTL+VSDYKRRRGLL
Sbjct: 595  ISLAVLQKFGGSQGGQAGFMARKQRIEATVGCSVPENDGRRHALTLSVSDYKRRRGLL 652


>ref|XP_009799534.1| PREDICTED: RNA polymerase-associated protein RTF1 homolog [Nicotiana
            sylvestris]
          Length = 654

 Score =  686 bits (1770), Expect = 0.0
 Identities = 377/600 (62%), Positives = 436/600 (72%), Gaps = 26/600 (4%)
 Frame = -3

Query: 1854 RKPSGSQVPLKKRLDPVERDND--GXXXXXXXXXXXXXXXXXXXXSVGSDLYKDEDDREK 1681
            RK SGSQVPLKKRLDP ERD+D                       S+GSDLYKDE+DR+K
Sbjct: 57   RKLSGSQVPLKKRLDPPERDDDRSSHGEGDDDGDGYGDERDSDDDSIGSDLYKDEEDRQK 116

Query: 1680 LSKLTELEREMILEARATKRSDRDLTEKLK---KRKGQDRKGSHPTPPTRSMRSK----- 1525
            L++++EL+REMIL  RA+K+SDR L EK+    K + Q RK S P   +R MRS      
Sbjct: 117  LAQMSELDREMILTDRASKKSDRSLQEKISGKIKNRSQPRKPSSPPSHSRGMRSSTRALD 176

Query: 1524 --AERAGALDELV-------------KXXXXXXXXXXXXRYSPVKRRSFATTTF-NXXXX 1393
              A+R  AL+E+              K             YSPVKRRSF      +    
Sbjct: 177  RAADRDDALNEIRAKRARQQDPEGNWKLRDAGRKGSGGRGYSPVKRRSFTAAALGSSPTR 236

Query: 1392 XXXXXXXXXXXXXXXXGMADSDDEKTSESKTPTFEDIKEITIRRSKLAKWFMEPFFDELI 1213
                            GM DSDD+K+ ES+ PTFEDIKEITIRRSKLAKWFMEPFFDELI
Sbjct: 237  GESDSRSNEGDSSGDDGMDDSDDDKSPESQLPTFEDIKEITIRRSKLAKWFMEPFFDELI 296

Query: 1212 VGCFVRVGIGKSRSGPIYRLCMVRNVDATEPDRQYKLDNKTTYKYLNVVWGNESSAARWQ 1033
            VGCFVRVGIG+SRSGPIYRLC+VRNVDAT+P+RQYKL+NKTT+K+LN++WGN+SSAARWQ
Sbjct: 297  VGCFVRVGIGRSRSGPIYRLCIVRNVDATDPNRQYKLENKTTFKFLNLIWGNDSSAARWQ 356

Query: 1032 MAMISDSSPLKEEFEQWVREVERSDGHMLSKQEVLEKRDAIQKTNTFVYSAATVKQMLQE 853
            MAM+SDS PL++EF+QWV+EVERS G M SKQ+VLEK++AIQK+NTFVYSA TVKQMLQ+
Sbjct: 357  MAMVSDSPPLRDEFDQWVKEVERSGGRMPSKQDVLEKKEAIQKSNTFVYSADTVKQMLQQ 416

Query: 852  KKSATWRPLNVAAEKDRLRRELEVAKMRDDEVEVERIKARLQELEESRQTQGNDSKAIRL 673
            KKSATWRPLNVAAEKDRLRRE+EVAKM++DE EVERIKARLQELE SR+ Q  D KA RL
Sbjct: 417  KKSATWRPLNVAAEKDRLRREMEVAKMKNDEAEVERIKARLQELEASRKAQEKDDKARRL 476

Query: 672  AEMNKRNRVENFKNASEKRPVNTSLKAGEAGYDPFSRRWTRSRNYYLSNSGGDEAAVETN 493
            AEMN++NRVENFKNASE RPVN  LKAGEAGYDPFSRRWTRS NY+ + S  + A   +N
Sbjct: 477  AEMNRKNRVENFKNASELRPVNQLLKAGEAGYDPFSRRWTRSTNYF-AKSANEAAVGASN 535

Query: 492  GDASAVLEVANINVGVEXXXXXXXXXXXXXXXXXXXXGKLVDTRAPVDQGTESNLLHNFE 313
            G+A+A L V + N G                      GKLVDT APVD GTESN LH+F+
Sbjct: 536  GEAAAALAVVD-NNGAGGIADGGMAATAAALQAAAGAGKLVDTIAPVDLGTESNTLHDFD 594

Query: 312  LPISLAVLQKFGGAQGSQAGFMARKQRMEATVGCTVPENDGRRHALTLTVSDYKRRRGLL 133
            LPISLAVLQKFGG QGSQAGF+ARKQR+EATVGC VPENDGRRHALTL+VSDYKRRRGLL
Sbjct: 595  LPISLAVLQKFGGPQGSQAGFIARKQRIEATVGCRVPENDGRRHALTLSVSDYKRRRGLL 654


>ref|XP_004232840.1| PREDICTED: RNA polymerase-associated protein RTF1 homolog [Solanum
            lycopersicum]
          Length = 645

 Score =  686 bits (1769), Expect = 0.0
 Identities = 379/597 (63%), Positives = 434/597 (72%), Gaps = 23/597 (3%)
 Frame = -3

Query: 1854 RKPSGSQVPLKKRLDPVERDNDGXXXXXXXXXXXXXXXXXXXXSVGSDLYKDEDDREKLS 1675
            RK SGSQVPLKKRLDP ERD+D                     S+GSDLYKD+DDR+KL+
Sbjct: 57   RKLSGSQVPLKKRLDPQERDDD-HSSHGEGNDGDGYGNESDDDSIGSDLYKDDDDRQKLA 115

Query: 1674 KLTELEREMILEARATKRSDRDLTEKLKKRKGQDRKGSHPTPPTRSMRSK-------AER 1516
            ++TELEREMIL  RA K+SDR L +K+ K + Q RK S P   +R MRS        A+R
Sbjct: 116  QMTELEREMILTDRAAKKSDRSLHDKMIKDRAQPRKQSSPPSHSRGMRSSTRALDRAADR 175

Query: 1515 AGALDEL--------------VKXXXXXXXXXXXXRYSPVKRRSFATTTF-NXXXXXXXX 1381
              AL+E+               K             YSP+KRRSF   +  +        
Sbjct: 176  DDALNEIRAKRARQQQDPEGQFKLRDAARKGSGSRGYSPIKRRSFTAASLGSSPTRGESD 235

Query: 1380 XXXXXXXXXXXXGMADSDDEKTS-ESKTPTFEDIKEITIRRSKLAKWFMEPFFDELIVGC 1204
                        GM DSDD+K+S ES+ PTFEDIKEI+IRRSKLAKWFMEPFFDELIVGC
Sbjct: 236  SHSNEGDSSADDGMDDSDDDKSSPESQLPTFEDIKEISIRRSKLAKWFMEPFFDELIVGC 295

Query: 1203 FVRVGIGKSRSGPIYRLCMVRNVDATEPDRQYKLDNKTTYKYLNVVWGNESSAARWQMAM 1024
            FVRVGIG+SRSGPIYRLC+VRNVDA++P+RQYKL+NKTT K+LNVVWGNE+SAARWQMAM
Sbjct: 296  FVRVGIGRSRSGPIYRLCVVRNVDASDPNRQYKLENKTTSKFLNVVWGNENSAARWQMAM 355

Query: 1023 ISDSSPLKEEFEQWVREVERSDGHMLSKQEVLEKRDAIQKTNTFVYSAATVKQMLQEKKS 844
            ISDS PL++EF+QWVREVERS G M SKQ+VLEK++AIQK+NTFVYSA TVKQMLQ+KKS
Sbjct: 356  ISDSPPLRDEFDQWVREVERSGGRMPSKQDVLEKKEAIQKSNTFVYSADTVKQMLQQKKS 415

Query: 843  ATWRPLNVAAEKDRLRRELEVAKMRDDEVEVERIKARLQELEESRQTQGNDSKAIRLAEM 664
            ATWRPLNVAAEKDRLRR++EVAKM++DE EVERIKARLQELE+SR+ Q  D KA RLAEM
Sbjct: 416  ATWRPLNVAAEKDRLRRDMEVAKMKNDEAEVERIKARLQELEDSRKVQEKDDKARRLAEM 475

Query: 663  NKRNRVENFKNASEKRPVNTSLKAGEAGYDPFSRRWTRSRNYYLSNSGGDEAAVETNGDA 484
            N++NRVENFKNASE RPVN  LKAGEAGYDPFSRRWTRS NY+   +   EAA      A
Sbjct: 476  NRKNRVENFKNASELRPVNQLLKAGEAGYDPFSRRWTRSTNYFAKGASNGEAA------A 529

Query: 483  SAVLEVANINVGVEXXXXXXXXXXXXXXXXXXXXGKLVDTRAPVDQGTESNLLHNFELPI 304
            +A L  A  N G                      GKLVDT APVDQGTESN LH+F+LPI
Sbjct: 530  AAAL-AAEDNNGAGGTADGGMAATAAALQAAAGAGKLVDTNAPVDQGTESNTLHDFDLPI 588

Query: 303  SLAVLQKFGGAQGSQAGFMARKQRMEATVGCTVPENDGRRHALTLTVSDYKRRRGLL 133
            SLAVLQKFGG+QG QAGFMARKQR+EATVGC+VPENDGRRHALTL+VSDYKRRRGLL
Sbjct: 589  SLAVLQKFGGSQGGQAGFMARKQRIEATVGCSVPENDGRRHALTLSVSDYKRRRGLL 645


>ref|XP_002519028.1| RNA polymerase-associated protein RTF1, putative [Ricinus communis]
            gi|223541691|gb|EEF43239.1| RNA polymerase-associated
            protein RTF1, putative [Ricinus communis]
          Length = 660

 Score =  677 bits (1746), Expect = 0.0
 Identities = 362/604 (59%), Positives = 433/604 (71%), Gaps = 30/604 (4%)
 Frame = -3

Query: 1854 RKPSGSQVPLKKRLDPVERDNDGXXXXXXXXXXXXXXXXXXXXS---VGSDLYKDEDDRE 1684
            RKPSGSQVPLKKRLDP ERD+D                         VG DLYK+EDDR 
Sbjct: 57   RKPSGSQVPLKKRLDPTERDDDQGSQDEGDYDDGNSDREGDSSDGSDVGEDLYKNEDDRR 116

Query: 1683 KLSKLTELEREMILEARATKRSDRDLTEKLKKRKGQDR-----KGSHPTPPTRSMRSKA- 1522
            KL++++ELEREMIL  RA K+ D++LTE+++ ++  +R     K + P P +R +R+ A 
Sbjct: 117  KLAQMSELEREMILSERADKKGDKNLTERIRSKRESERTTRSRKETPPLPSSRGVRTSAR 176

Query: 1521 --ERAGALDELV-----------------KXXXXXXXXXXXXRYSPVKRRSFATTTFNXX 1399
              +RA A D+ +                 K             +SP+KR+ F + + +  
Sbjct: 177  SADRAAAKDDALNELKARRLKQQDPEAHRKLRDASRRGSGSRGFSPIKRKRFTSASLSSS 236

Query: 1398 XXXXXXXXXXXXXXXXXXG-MADSDDEKTSESKTPTFEDIKEITIRRSKLAKWFMEPFFD 1222
                              G MADSDD+    S+ PTF+DI+EITIRRSKLAKWFMEP+F+
Sbjct: 237  SSESESRSHSEDEGSTGDGGMADSDDDGEPGSQGPTFDDIREITIRRSKLAKWFMEPWFE 296

Query: 1221 ELIVGCFVRVGIGKSRSGPIYRLCMVRNVDATEPDRQYKLDNKTTYKYLNVVWGNESSAA 1042
            ELIVGCFVRVGIG+S+SGPIYRLC+VRNVDA +PDR YKL+NKTTYKYLNV+WGNESSAA
Sbjct: 297  ELIVGCFVRVGIGRSKSGPIYRLCLVRNVDAADPDRPYKLENKTTYKYLNVIWGNESSAA 356

Query: 1041 RWQMAMISDSSPLKEEFEQWVREVERSDGHMLSKQEVLEKRDAIQKTNTFVYSAATVKQM 862
            RWQMAMISDS+P ++E++QWVREVERS G M +KQ++LEK++AI+K+NTFVYSAATVKQM
Sbjct: 357  RWQMAMISDSAPTEDEYKQWVREVERSGGRMPTKQDILEKKEAIRKSNTFVYSAATVKQM 416

Query: 861  LQEKKSATWRPLNVAAEKDRLRRELEVAKMRDDEVEVERIKARLQELEESRQTQGNDSKA 682
            LQEKKSA+ RPLNVAAEKDRLRRELEVA+ + D+ EVERI+AR+QELE SRQTQG D+KA
Sbjct: 417  LQEKKSASSRPLNVAAEKDRLRRELEVAQSKQDDAEVERIRARIQELEASRQTQGKDAKA 476

Query: 681  IRLAEMNKRNRVENFKNASEKRPVNTSLKAGEAGYDPFSRRWTRSRNYYLSNSGGDEAAV 502
            IRLAEMN++NR ENF+NASE +PVNTSLKAGEAGYDPFSRRWTRSRNYY+S   G +AA 
Sbjct: 477  IRLAEMNRKNRAENFRNASELKPVNTSLKAGEAGYDPFSRRWTRSRNYYVSKPAGGDAAA 536

Query: 501  ETNGDASAVLEVAN-INVGVEXXXXXXXXXXXXXXXXXXXXGKLVDTRAPVDQGTESNLL 325
             TN +AS  + VAN                           GKLVDT APVDQGTESN L
Sbjct: 537  ATNNEASGTVAVANKTESAAGVSAEAGMAATAAALEAAADAGKLVDTAAPVDQGTESNTL 596

Query: 324  HNFELPISLAVLQKFGGAQGSQAGFMARKQRMEATVGCTVPENDGRRHALTLTVSDYKRR 145
            HNFELPISL  LQKFGGAQG+QAGFMARKQR+EAT+GC V END +RH LTLTVSDYKRR
Sbjct: 597  HNFELPISLTALQKFGGAQGAQAGFMARKQRIEATIGCRVSENDEKRHVLTLTVSDYKRR 656

Query: 144  RGLL 133
            RGLL
Sbjct: 657  RGLL 660


>ref|XP_010646904.1| PREDICTED: RNA polymerase-associated protein RTF1 homolog [Vitis
            vinifera]
          Length = 658

 Score =  674 bits (1740), Expect = 0.0
 Identities = 370/602 (61%), Positives = 425/602 (70%), Gaps = 28/602 (4%)
 Frame = -3

Query: 1854 RKPSGSQVPLKKRLDPVERDND-GXXXXXXXXXXXXXXXXXXXXSVGSDLYKDEDDREKL 1678
            RKPSGSQVPLKKRLDP ERD+D G                     VGSDLYK+EDDR++L
Sbjct: 57   RKPSGSQVPLKKRLDPTERDDDHGSPEEGDDDGSDHEGDSSDDSDVGSDLYKNEDDRQQL 116

Query: 1677 SKLTELEREMILEARATKRSDRDLTEKLKKRKG----QDRKGSHPTPPTRSMRSKA---E 1519
            ++LTELEREMIL  RATK++D+ L EKL+ ++G    Q RK S P   +R +RS A   +
Sbjct: 117  AQLTELEREMILTDRATKKTDKKLHEKLRSKRGKEKTQSRKESPPLQLSRGVRSSARSAD 176

Query: 1518 RAGALDELV-----------------KXXXXXXXXXXXXRYSPVKRRSF--ATTTFNXXX 1396
            RA A D+ +                 K             +SPVKRR+F  A+ + +   
Sbjct: 177  RAAAKDDALNELRAKRLKHQDPEAHRKLRDASRGGSSNRGFSPVKRRAFTAASLSSSSQS 236

Query: 1395 XXXXXXXXXXXXXXXXXGMADSDDEKTSESKTPTFEDIKEITIRRSKLAKWFMEPFFDEL 1216
                              M DSDD++   S  PTFEDIK ITIRRSKLAKWFMEPFF+EL
Sbjct: 237  ESDGGSRSEDEGSTGDGAMVDSDDDRGIGSDVPTFEDIKSITIRRSKLAKWFMEPFFEEL 296

Query: 1215 IVGCFVRVGIGKSRSGPIYRLCMVRNVDATEPDRQYKLDNKTTYKYLNVVWGNESSAARW 1036
            IVGCFVRVGIGKSRSGPIYRLCMVRNVDA++PDR Y+L+NKTTYKYLN VWGNE+S+ARW
Sbjct: 297  IVGCFVRVGIGKSRSGPIYRLCMVRNVDASDPDRHYQLENKTTYKYLNCVWGNENSSARW 356

Query: 1035 QMAMISDSSPLKEEFEQWVREVERSDGHMLSKQEVLEKRDAIQKTNTFVYSAATVKQMLQ 856
            QMAM+SDS PL EEF QWV+EVERS   ML+KQ++LEKR+AIQKTN FVYSAAT KQMLQ
Sbjct: 357  QMAMVSDSGPLMEEFNQWVKEVERSGSRMLTKQDILEKREAIQKTNMFVYSAATGKQMLQ 416

Query: 855  EKKSATWRPLNVAAEKDRLRRELEVAKMRDDEVEVERIKARLQELEESRQTQGNDSKAIR 676
            EKKS + RPLN+ AEKDRLRRE+EVA  + D+ EVERI  RLQ+LE SR+++  D+KAIR
Sbjct: 417  EKKSVSSRPLNIVAEKDRLRREMEVALSKHDQAEVERINTRLQQLEASRRSKEKDAKAIR 476

Query: 675  LAEMNKRNRVENFKNASEKRPVNTSLKAGEAGYDPFSRRWTRSRNYYLSN-SGGDEAAVE 499
            LAEMN++NR ENFKNASE + VNTSLKAGEAGYDPFSRRWTRSRNYY+S   GGDEAA  
Sbjct: 477  LAEMNRKNRAENFKNASESKRVNTSLKAGEAGYDPFSRRWTRSRNYYVSKPGGGDEAAAV 536

Query: 498  TNGDASAVLEVANINVGVEXXXXXXXXXXXXXXXXXXXXGKLVDTRAPVDQGTESNLLHN 319
             NG+A A    A  N                        GKLVDT APVDQGTESN LH+
Sbjct: 537  ANGEAPAAFVGAGSNGTGGKGAEVGVAATAAALEAAADAGKLVDTSAPVDQGTESNTLHD 596

Query: 318  FELPISLAVLQKFGGAQGSQAGFMARKQRMEATVGCTVPENDGRRHALTLTVSDYKRRRG 139
            FELPISLA LQKFGG QG+ AGFMARKQR+EATVGC VPENDGRRHALTLTV DYKRRRG
Sbjct: 597  FELPISLAGLQKFGGPQGALAGFMARKQRIEATVGCRVPENDGRRHALTLTVGDYKRRRG 656

Query: 138  LL 133
            LL
Sbjct: 657  LL 658


>emb|CDO99584.1| unnamed protein product [Coffea canephora]
          Length = 631

 Score =  673 bits (1736), Expect = 0.0
 Identities = 373/595 (62%), Positives = 423/595 (71%), Gaps = 21/595 (3%)
 Frame = -3

Query: 1854 RKPSGSQVPLKKRLDPVERDNDGXXXXXXXXXXXXXXXXXXXXSVGSDLYKDEDDREKLS 1675
            RKPSGSQVPLKKRLDP+ERD D                      VGSDLYKDEDDR+KL+
Sbjct: 51   RKPSGSQVPLKKRLDPLERDEDDSNHEEDGYHEGDSDDDS----VGSDLYKDEDDRKKLA 106

Query: 1674 KLTELEREMILEARATKRSDRDLTEKLKKRKGQDRKGSHPTPPTRSMRSK---AERAGAL 1504
            +++EL+REMIL  RA+ RSDR++ EK  K+    RKGS     +R++RS    A+R  A 
Sbjct: 107  QMSELQREMILADRASTRSDREMHEKFAKK----RKGSPTQTHSRAVRSSTRFADRTAAK 162

Query: 1503 DELV-----------------KXXXXXXXXXXXXRYSPVKRRSFATTTFNXXXXXXXXXX 1375
            D+ +                 K             YSPVKRR F   T            
Sbjct: 163  DDALNEIRAKRMRQQDPEAHRKLRDATRDGSGSRGYSPVKRRPFTAATIGSPTRSGSASH 222

Query: 1374 XXXXXXXXXXGMADSDDEKTS-ESKTPTFEDIKEITIRRSKLAKWFMEPFFDELIVGCFV 1198
                      GMADSD++KTS ESK PT+EDIKEITIRRSKLAKWFMEPFF++LIVGCFV
Sbjct: 223  SDEEESTGDGGMADSDEDKTSAESKWPTYEDIKEITIRRSKLAKWFMEPFFEDLIVGCFV 282

Query: 1197 RVGIGKSRSGPIYRLCMVRNVDATEPDRQYKLDNKTTYKYLNVVWGNESSAARWQMAMIS 1018
            RVGIGK+R GPIYRLC+VRNVD ++PDR YKLDNKTTYKYLNVVWGNE+SAARWQMAMIS
Sbjct: 283  RVGIGKNRYGPIYRLCVVRNVDGSDPDRLYKLDNKTTYKYLNVVWGNENSAARWQMAMIS 342

Query: 1017 DSSPLKEEFEQWVREVERSDGHMLSKQEVLEKRDAIQKTNTFVYSAATVKQMLQEKKSAT 838
            DS P KEE++QWVREVERS G M SK EVLEK++AIQKTN+FVYSA TVKQMLQEKKSAT
Sbjct: 343  DSPPAKEEYDQWVREVERSGGRMPSKLEVLEKKEAIQKTNSFVYSAETVKQMLQEKKSAT 402

Query: 837  WRPLNVAAEKDRLRRELEVAKMRDDEVEVERIKARLQELEESRQTQGNDSKAIRLAEMNK 658
            WRPLNVAAEKDRLR E+EVAK+ +DE+EVERIKARLQELE SRQ    D KAIRLAEMN+
Sbjct: 403  WRPLNVAAEKDRLRTEMEVAKINNDELEVERIKARLQELEASRQAHEMDKKAIRLAEMNR 462

Query: 657  RNRVENFKNASEKRPVNTSLKAGEAGYDPFSRRWTRSRNYYLSNSGGDEAAVETNGDASA 478
            +NRVENFKNAS  +PVN SLKAGEAGYDPFSRRWTRSRNYY+ N    EA    +G+A+A
Sbjct: 463  KNRVENFKNASGLKPVNASLKAGEAGYDPFSRRWTRSRNYYVKNPIDGEATA-ADGEATA 521

Query: 477  VLEVANINVGVEXXXXXXXXXXXXXXXXXXXXGKLVDTRAPVDQGTESNLLHNFELPISL 298
               V N N                        GKLVDT APVDQG ESN+LH F+L I+L
Sbjct: 522  ASAVNNRN-----GTAVVSTEMGKAATATADDGKLVDTSAPVDQGRESNMLHGFKLEINL 576

Query: 297  AVLQKFGGAQGSQAGFMARKQRMEATVGCTVPENDGRRHALTLTVSDYKRRRGLL 133
              L+ FGGA+G+QAGFMARKQR+EATVGC VPENDGRRHALTLTVSDYKRR GLL
Sbjct: 577  DPLENFGGAKGAQAGFMARKQRIEATVGCRVPENDGRRHALTLTVSDYKRRMGLL 631


>ref|XP_012091565.1| PREDICTED: RNA polymerase-associated protein RTF1 homolog [Jatropha
            curcas] gi|643703874|gb|KDP20938.1| hypothetical protein
            JCGZ_21409 [Jatropha curcas]
          Length = 658

 Score =  663 bits (1711), Expect = 0.0
 Identities = 352/603 (58%), Positives = 432/603 (71%), Gaps = 29/603 (4%)
 Frame = -3

Query: 1854 RKPSGSQVPLKKRLDPVERDNDGXXXXXXXXXXXXXXXXXXXXS---VGSDLYKDEDDRE 1684
            RKPSGSQVPLKKRLDP ERD+D                         VG DLYKDEDDR 
Sbjct: 57   RKPSGSQVPLKKRLDPAERDDDQGSQEEGGYDDGASDREGDSSDESDVGDDLYKDEDDRR 116

Query: 1683 KLSKLTELEREMILEARATKRSDRDLTEKLKKRKGQDR-----KGSHPTPPTRSMRSKA- 1522
            KL++++ELEREMIL  RA K+ D++LTE+++ ++  +R     K + P P +R +R+ A 
Sbjct: 117  KLAQMSELEREMILSERADKKGDKNLTERIRSKRDSERATRSRKETPPLPSSRGVRTSAR 176

Query: 1521 --ERAGALDELV-----------------KXXXXXXXXXXXXRYSPVKRRSFATTTFNXX 1399
              +RA A D+ +                 K              SPV+R+ F + + +  
Sbjct: 177  SADRAAAKDDALNELRAKRLKQQDPEAHRKLRDVSRGTSGSRGVSPVRRKRFTSASLSSS 236

Query: 1398 XXXXXXXXXXXXXXXXXXG-MADSDDEKTSESKTPTFEDIKEITIRRSKLAKWFMEPFFD 1222
                              G MADSD+++   S+  T++DI+E+TIRRSKLAKW MEP+F+
Sbjct: 237  SSESDSRSHSEDEASTGDGGMADSDEDREPGSEGLTYDDIREVTIRRSKLAKWLMEPWFE 296

Query: 1221 ELIVGCFVRVGIGKSRSGPIYRLCMVRNVDATEPDRQYKLDNKTTYKYLNVVWGNESSAA 1042
            ELIVGCFVRVGIG+S+SGPIYRLC+VRNVDA +PDR YKL+NKTTYKYLNV+WGNESSAA
Sbjct: 297  ELIVGCFVRVGIGRSKSGPIYRLCLVRNVDAADPDRPYKLENKTTYKYLNVIWGNESSAA 356

Query: 1041 RWQMAMISDSSPLKEEFEQWVREVERSDGHMLSKQEVLEKRDAIQKTNTFVYSAATVKQM 862
            RWQMAM+SDS+P ++E++QWVREVERS G M +KQ++LEK++AI+K+NTFVYSAATVKQM
Sbjct: 357  RWQMAMVSDSAPTEDEYKQWVREVERSGGRMPTKQDILEKKEAIKKSNTFVYSAATVKQM 416

Query: 861  LQEKKSATWRPLNVAAEKDRLRRELEVAKMRDDEVEVERIKARLQELEESRQTQGNDSKA 682
            LQEKKSA+ RPLNVAAEKDRLRRELEVA+M+ D+ EVERI+AR+QELE SRQ Q  D+KA
Sbjct: 417  LQEKKSASTRPLNVAAEKDRLRRELEVAQMKQDDAEVERIRARIQELEASRQAQEKDAKA 476

Query: 681  IRLAEMNKRNRVENFKNASEKRPVNTSLKAGEAGYDPFSRRWTRSRNYYLSNSGGDEAAV 502
            IRLAEMN++NR ENF+NASE +PVNTSLKAGEAGYDPFSRRWTRSRNYY+S  GG + A 
Sbjct: 477  IRLAEMNRKNRAENFRNASELKPVNTSLKAGEAGYDPFSRRWTRSRNYYVSKPGGADVAA 536

Query: 501  ETNGDASAVLEVANINVGVEXXXXXXXXXXXXXXXXXXXXGKLVDTRAPVDQGTESNLLH 322
            E N + +A +  +N                          GKLVDT APVDQGTESN LH
Sbjct: 537  EANNNGTAAVAHSN-GAATGTLAEAGMAATAAALEAAADAGKLVDTAAPVDQGTESNTLH 595

Query: 321  NFELPISLAVLQKFGGAQGSQAGFMARKQRMEATVGCTVPENDGRRHALTLTVSDYKRRR 142
            +F+LPISL  L+KFGGA+G++AGFMARKQ++EATVGC VPENDGRRHALTLTVSDYKRRR
Sbjct: 596  DFDLPISLTALEKFGGAKGAKAGFMARKQQIEATVGCRVPENDGRRHALTLTVSDYKRRR 655

Query: 141  GLL 133
            GLL
Sbjct: 656  GLL 658


>ref|XP_007025691.1| PAF1 complex component isoform 1 [Theobroma cacao]
            gi|590624750|ref|XP_007025692.1| PAF1 complex component
            isoform 1 [Theobroma cacao] gi|508781057|gb|EOY28313.1|
            PAF1 complex component isoform 1 [Theobroma cacao]
            gi|508781058|gb|EOY28314.1| PAF1 complex component
            isoform 1 [Theobroma cacao]
          Length = 660

 Score =  657 bits (1696), Expect = 0.0
 Identities = 358/605 (59%), Positives = 419/605 (69%), Gaps = 31/605 (5%)
 Frame = -3

Query: 1854 RKPSGSQVPLKKRLDPVERDNDGXXXXXXXXXXXXXXXXXXXXS---VGSDLYKDEDDRE 1684
            RKPSGSQVPLKKRLDP ERD+D                         VG DLYK+EDDR 
Sbjct: 57   RKPSGSQVPLKKRLDPAERDDDQGSQEEGDYDDGVSVHEGDSSDESDVGDDLYKNEDDRR 116

Query: 1683 KLSKLTELEREMILEARATKRSDRDLTEKLKKRKGQDR-----KGSHPTPPTRSMRSKA- 1522
            KL+++TELERE+IL  RA KR D+  TEK++ ++  DR     K + P P +R +RS A 
Sbjct: 117  KLAQMTELERELILSERADKRGDKKFTEKIRSKRENDRPSRSRKETPPLPSSRGVRSSAR 176

Query: 1521 --ERAGALDELV-----------------KXXXXXXXXXXXXRYSPVKRRSFATTTFNXX 1399
              +RA A D+ +                 K              SPVKR+ F  ++ +  
Sbjct: 177  SADRAAAKDDALNELRAKRLKQQDPEAHRKLRDASRGSSGSRGLSPVKRKPFTASSLSSS 236

Query: 1398 XXXXXXXXXXXXXXXXXXG--MADSDDEKTSESKT-PTFEDIKEITIRRSKLAKWFMEPF 1228
                                 M DSDD++  +    PTF+DIKEITIRRSKLAKWFMEPF
Sbjct: 237  SQSDSESRSNSEDEGSTGDGGMVDSDDDRGMQGPDGPTFDDIKEITIRRSKLAKWFMEPF 296

Query: 1227 FDELIVGCFVRVGIGKSRSGPIYRLCMVRNVDATEPDRQYKLDNKTTYKYLNVVWGNESS 1048
            F+ELIVGC+VRVGIG+S+SGPIYRLCMVRNVDATEP+R YKL+NKTTYKYLNVVWGNESS
Sbjct: 297  FEELIVGCYVRVGIGRSKSGPIYRLCMVRNVDATEPERTYKLENKTTYKYLNVVWGNESS 356

Query: 1047 AARWQMAMISDSSPLKEEFEQWVREVERSDGHMLSKQEVLEKRDAIQKTNTFVYSAATVK 868
            AARWQMAMISDS P +EEF Q +RE+ERS G M SKQ+VLEK++A+QK  TFVYSAATVK
Sbjct: 357  AARWQMAMISDSPPQEEEFRQLIRELERSGGRMPSKQDVLEKKEALQKAKTFVYSAATVK 416

Query: 867  QMLQEKKSATWRPLNVAAEKDRLRRELEVAKMRDDEVEVERIKARLQELEESRQTQGNDS 688
            QMLQEKKS + RPLN+AAEKDRLRR+LE+A+ + DE EVERIK RLQ+LE SRQ Q  D+
Sbjct: 417  QMLQEKKSTSSRPLNIAAEKDRLRRDLEIAQSKHDEAEVERIKMRLQQLEASRQAQEKDA 476

Query: 687  KAIRLAEMNKRNRVENFKNASEKRPVNTSLKAGEAGYDPFSRRWTRSRNYYLSNSGGDEA 508
            KA+RLAEMN++NR ENFKNASE +PVNT LKAGEAGYDPFSRRWTRSRNYY++   G +A
Sbjct: 477  KAVRLAEMNRKNRAENFKNASELKPVNTGLKAGEAGYDPFSRRWTRSRNYYVAKPPGADA 536

Query: 507  AVETNGDASAVLEVANINVGVEXXXXXXXXXXXXXXXXXXXXGKLVDTRAPVDQGTESNL 328
            A   NGD   V+   N N                        GKLVDT APVD+GTESN+
Sbjct: 537  AAVANGDRIGVIASGNGN-DARAAAEAGRAATVAALQEAAGAGKLVDTSAPVDEGTESNM 595

Query: 327  LHNFELPISLAVLQKFGGAQGSQAGFMARKQRMEATVGCTVPENDGRRHALTLTVSDYKR 148
            LH+FE+PISL  LQ+FGG QG+ AGFMARKQR+EATVGC VPENDGRRHALTLTVSDYKR
Sbjct: 596  LHDFEIPISLNALQRFGGPQGAVAGFMARKQRIEATVGCQVPENDGRRHALTLTVSDYKR 655

Query: 147  RRGLL 133
            RRGLL
Sbjct: 656  RRGLL 660


>ref|XP_012455370.1| PREDICTED: RNA polymerase-associated protein RTF1 homolog [Gossypium
            raimondii] gi|763802543|gb|KJB69481.1| hypothetical
            protein B456_011G025800 [Gossypium raimondii]
            gi|763802544|gb|KJB69482.1| hypothetical protein
            B456_011G025800 [Gossypium raimondii]
            gi|763802545|gb|KJB69483.1| hypothetical protein
            B456_011G025800 [Gossypium raimondii]
          Length = 660

 Score =  655 bits (1690), Expect = 0.0
 Identities = 359/604 (59%), Positives = 418/604 (69%), Gaps = 30/604 (4%)
 Frame = -3

Query: 1854 RKPSGSQVPLKKRLDPVERDNDGXXXXXXXXXXXXXXXXXXXXS---VGSDLYKDEDDRE 1684
            RKPSGSQVPLKKRLDP ERD+D                         VG DLYK+E+DR 
Sbjct: 57   RKPSGSQVPLKKRLDPAERDDDQGSQEEGDYNDAGSGRERDSSDESDVGDDLYKNEEDRR 116

Query: 1683 KLSKLTELEREMILEARATKRSDRDLTEKLKKRKGQDR--KGSHPTPP-----TRSMRSK 1525
            +L++LTELEREMIL  RA KR D+  TEK++ ++  DR  +    TPP      RS    
Sbjct: 117  QLAQLTELEREMILSERADKRGDKKFTEKIRSKRENDRPSRSQRETPPLPSRGVRSSARS 176

Query: 1524 AERAGALDELV-----------------KXXXXXXXXXXXXRYSPVKRRSFATTTFNXXX 1396
            A+RA A D+ +                 K              SPVKR+ F  ++ +   
Sbjct: 177  ADRAAAKDDALNELRAKRLKQQDPEAHRKLRDASRGSSGNRGLSPVKRKPFTASSLSSSS 236

Query: 1395 XXXXXXXXXXXXXXXXXG--MADSDDEK-TSESKTPTFEDIKEITIRRSKLAKWFMEPFF 1225
                                M DS+DE+ T     PTF DIKEITIRRSKLAKW MEPFF
Sbjct: 237  QSESESRSNSEDEGSTGDGGMVDSEDERGTWGPNGPTFNDIKEITIRRSKLAKWLMEPFF 296

Query: 1224 DELIVGCFVRVGIGKSRSGPIYRLCMVRNVDATEPDRQYKLDNKTTYKYLNVVWGNESSA 1045
            +ELIVGCFVRVGIG+S++G IYRLCMVRNVDAT+PDR YKL+NKTTYKYLNVVWGNESSA
Sbjct: 297  EELIVGCFVRVGIGRSKTGAIYRLCMVRNVDATDPDRTYKLENKTTYKYLNVVWGNESSA 356

Query: 1044 ARWQMAMISDSSPLKEEFEQWVREVERSDGHMLSKQEVLEKRDAIQKTNTFVYSAATVKQ 865
            ARWQMAMISDS PL+EEF Q +REVERS G M SKQ+VLEK++A+QK  TFVYSAATVKQ
Sbjct: 357  ARWQMAMISDSPPLEEEFRQLIREVERSGGRMPSKQDVLEKKEALQKAKTFVYSAATVKQ 416

Query: 864  MLQEKKSATWRPLNVAAEKDRLRRELEVAKMRDDEVEVERIKARLQELEESRQTQGNDSK 685
            MLQEKKS++ RPLNVAAEKDRLRR+LE+A+ + D+VEVERIK RLQ+LE SRQ+Q  D+K
Sbjct: 417  MLQEKKSSSSRPLNVAAEKDRLRRDLEIAQSKHDDVEVERIKKRLQQLEASRQSQEKDAK 476

Query: 684  AIRLAEMNKRNRVENFKNASEKRPVNTSLKAGEAGYDPFSRRWTRSRNYYLSNSGGDEAA 505
            A+RLAEMN++NRVENFKNAS  +PVNT LKAGEAGYDPFSRRWTRSRNYY + + G +AA
Sbjct: 477  AVRLAEMNRKNRVENFKNASGLKPVNTGLKAGEAGYDPFSRRWTRSRNYYNAKAPGGDAA 536

Query: 504  VETNGDASAVLEVANINVGVEXXXXXXXXXXXXXXXXXXXXGKLVDTRAPVDQGTESNLL 325
               NGD +  +   N N                        GKLVDT APVD+GTESN+L
Sbjct: 537  AVANGDTNGAIGSGNGNDAGAAAAEAGRAATAAALQEAAGAGKLVDTNAPVDEGTESNML 596

Query: 324  HNFELPISLAVLQKFGGAQGSQAGFMARKQRMEATVGCTVPENDGRRHALTLTVSDYKRR 145
            H+FELPISL VL+KFGG +G+ AGFMARKQR+EATVGC VPENDGRRHALTLTVSDYKRR
Sbjct: 597  HDFELPISLDVLRKFGGHEGAVAGFMARKQRIEATVGCRVPENDGRRHALTLTVSDYKRR 656

Query: 144  RGLL 133
            RGLL
Sbjct: 657  RGLL 660


>ref|XP_003529309.1| PREDICTED: RNA polymerase-associated protein RTF1 homolog isoform X1
            [Glycine max] gi|571466984|ref|XP_006583809.1| PREDICTED:
            RNA polymerase-associated protein RTF1 homolog isoform X2
            [Glycine max]
          Length = 656

 Score =  653 bits (1684), Expect = 0.0
 Identities = 358/601 (59%), Positives = 423/601 (70%), Gaps = 27/601 (4%)
 Frame = -3

Query: 1854 RKPSGSQVPLKKRLDPVERDND--GXXXXXXXXXXXXXXXXXXXXSVGSDLYKDEDDREK 1681
            RKPSGSQVPLKKRLDP ERD+D                       ++G DLYKDEDDR K
Sbjct: 57   RKPSGSQVPLKKRLDPTERDDDLGSQEEADDDGRSDCDGDSSDESNIGDDLYKDEDDRRK 116

Query: 1680 LSKLTELEREMILEARATKRSDRDLTEKL--KKRKGQDRKGSHPTPPTRSMRSKAE---- 1519
            LS++TEL+REMIL  RATK+ D++L  K+  K+ KG+       +PP  S R +A     
Sbjct: 117  LSEMTELQREMILSDRATKKDDKNLLGKIASKREKGKVAVPRKQSPPMSSSRMRASARSA 176

Query: 1518 ----RAGALDELV------------KXXXXXXXXXXXXRYSPVKRRSFATTTFNXXXXXX 1387
                +  AL+EL             +             +SP KR+ F +T+ +      
Sbjct: 177  DRSAKNDALNELRAKRLKQQDPEAHRRLREASRNAGSRHFSPPKRKPFTSTSLSSSSHSE 236

Query: 1386 XXXXXXXXXXXXXXG--MADSDDEKT-SESKTPTFEDIKEITIRRSKLAKWFMEPFFDEL 1216
                             + DSDD++  + S+ P+F+D+KEITIRRSKLAKWFMEPFF+EL
Sbjct: 237  SESRSHSDDEGSTGDGGIVDSDDDRALAGSEGPSFQDVKEITIRRSKLAKWFMEPFFEEL 296

Query: 1215 IVGCFVRVGIGKSRSGPIYRLCMVRNVDATEPDRQYKLDNKTTYKYLNVVWGNESSAARW 1036
            IVGCFVRVGIG+S++GPIYRLCMV+NVDA+EPDRQYKL+NKTTYKYLNVVWGNESSAARW
Sbjct: 297  IVGCFVRVGIGRSKTGPIYRLCMVKNVDASEPDRQYKLENKTTYKYLNVVWGNESSAARW 356

Query: 1035 QMAMISDSSPLKEEFEQWVREVERSDGHMLSKQEVLEKRDAIQKTNTFVYSAATVKQMLQ 856
            QMAM+SDS+PL+EEF+QWV+EV+RS G M SKQ+VLEK+ AIQK  TFVYSAATVKQMLQ
Sbjct: 357  QMAMVSDSAPLEEEFKQWVKEVDRSGGRMPSKQDVLEKKQAIQKAITFVYSAATVKQMLQ 416

Query: 855  EKKSATWRPLNVAAEKDRLRRELEVAKMRDDEVEVERIKARLQELEESRQTQGNDSKAIR 676
            EKKSA+ RPLNVAAEKDRLRRELE+A+ + DE EVERIK RL ELE SRQ +  D+KA++
Sbjct: 417  EKKSASTRPLNVAAEKDRLRRELEIAQSKYDEAEVERIKTRLLELEASRQAKQKDAKALK 476

Query: 675  LAEMNKRNRVENFKNASEKRPVNTSLKAGEAGYDPFSRRWTRSRNYYLSNSGGDEAAVET 496
            LAEMN++NR ENFKNASE +PVNT LKAGEAGYDPFSRRWTRSRNYY +   G++AA   
Sbjct: 477  LAEMNRKNRFENFKNASEMKPVNTGLKAGEAGYDPFSRRWTRSRNYYAAKP-GEKAAAGN 535

Query: 495  NGDASAVLEVANINVGVEXXXXXXXXXXXXXXXXXXXXGKLVDTRAPVDQGTESNLLHNF 316
            N     V    +   G                      GKLVDT APVDQGTESN+LHNF
Sbjct: 536  NSVNGNVAGAGSNGTGAPVTAEAGMVATAAALEAAAGAGKLVDTSAPVDQGTESNMLHNF 595

Query: 315  ELPISLAVLQKFGGAQGSQAGFMARKQRMEATVGCTVPENDGRRHALTLTVSDYKRRRGL 136
            ELPISLA+LQKFGGAQG+QAGFMARKQ++EATVG  V ENDGRRHALTLTVSDYKRRRGL
Sbjct: 596  ELPISLALLQKFGGAQGAQAGFMARKQKIEATVGFRVSENDGRRHALTLTVSDYKRRRGL 655

Query: 135  L 133
            L
Sbjct: 656  L 656


>ref|XP_008453742.1| PREDICTED: RNA polymerase-associated protein RTF1 homolog [Cucumis
            melo] gi|659107574|ref|XP_008453743.1| PREDICTED: RNA
            polymerase-associated protein RTF1 homolog [Cucumis melo]
          Length = 660

 Score =  652 bits (1681), Expect = 0.0
 Identities = 360/605 (59%), Positives = 423/605 (69%), Gaps = 31/605 (5%)
 Frame = -3

Query: 1854 RKPSGSQVPLKKRLDPVERDNDGXXXXXXXXXXXXXXXXXXXXS---VGSDLYKDEDDRE 1684
            RKPSGSQVPLKKRLDP ERD+DG                        VG DLYKD+DDR 
Sbjct: 57   RKPSGSQVPLKKRLDPTERDDDGGSPEEGEDEDVGSEHEGDSSDESDVGDDLYKDDDDRR 116

Query: 1683 KLSKLTELEREMILEARATKRSDRDLTEKLKKR--KGQDRKGSHPTPPTRSMRSK----- 1525
            KL+ ++EL+REMIL  RA+K++D+ L E L+ +  KG+       TPP  S R +     
Sbjct: 117  KLAGMSELQREMILSDRASKKNDKHLYESLRAKMDKGKTAPSRKETPPLPSSRIRSSARS 176

Query: 1524 AERAGALDELV-----------------KXXXXXXXXXXXXRYSPVKRRSFATTTFNXXX 1396
            A+RA A D+ +                 K            R+SP KR+ F   + +   
Sbjct: 177  ADRAAAKDDALNELRAKRLKQQDPEAHRKLRDASRGNSNNRRFSPTKRKPFTAPSLSSSS 236

Query: 1395 XXXXXXXXXXXXXXXXXG--MADSDDEKTSE-SKTPTFEDIKEITIRRSKLAKWFMEPFF 1225
                                M DSDDE++   S  PTFEDIKEITIRRSKLAKW MEPFF
Sbjct: 237  QSESESRFQSDDEGSTGDGGMIDSDDERSMPGSDGPTFEDIKEITIRRSKLAKWLMEPFF 296

Query: 1224 DELIVGCFVRVGIGKSRSGPIYRLCMVRNVDATEPDRQYKLDNKTTYKYLNVVWGNESSA 1045
            +ELIVGCFVRVGIG+SRSGPIYRLC+VRNVDATEPDRQYKL+NK T+KYLNV+WGNE+SA
Sbjct: 297  EELIVGCFVRVGIGRSRSGPIYRLCLVRNVDATEPDRQYKLENKITHKYLNVIWGNENSA 356

Query: 1044 ARWQMAMISDSSPLKEEFEQWVREVERSDGHMLSKQEVLEKRDAIQKTNTFVYSAATVKQ 865
            ARWQMAM+SDS+PL++E++QWV+EVER+ G MLSKQ+VLEK+DAIQK N FVYSAATVKQ
Sbjct: 357  ARWQMAMVSDSAPLEDEYKQWVKEVERTGGRMLSKQDVLEKKDAIQKVNNFVYSAATVKQ 416

Query: 864  MLQEKKSATWRPLNVAAEKDRLRRELEVAKMRDDEVEVERIKARLQELEESRQTQGNDSK 685
            MLQ+KKSA+ RPLN+AAEKDRLRRE++VA  ++DE EVERIK RLQ+LE SR+ Q  D+K
Sbjct: 417  MLQDKKSASARPLNIAAEKDRLRREMDVAVSKNDEAEVERIKGRLQQLEASRRLQMKDAK 476

Query: 684  AIRLAEMNKRNRVENFKNASEKRPVNTSLKAGEAGYDPFSRRWTRSRNYYLSNSGGDEAA 505
            AIRLAEMN++NRVENFKNASE RP+   LKAGEAGYDPFSRRWTRSRNYY+SN+G    A
Sbjct: 477  AIRLAEMNRKNRVENFKNASELRPLK-DLKAGEAGYDPFSRRWTRSRNYYVSNAGEANGA 535

Query: 504  VETNGDASAVL-EVANINVGVEXXXXXXXXXXXXXXXXXXXXGKLVDTRAPVDQGTESNL 328
             E  G++  V   + +   G                      GKLVDT APVD GTESN 
Sbjct: 536  AEAAGNSDTVTPALESTRTGAGGTSDAGMAATAAALEAAAGAGKLVDTNAPVDGGTESNS 595

Query: 327  LHNFELPISLAVLQKFGGAQGSQAGFMARKQRMEATVGCTVPENDGRRHALTLTVSDYKR 148
            LHNFELPISLA+LQKFGGA G+QAGF+ARKQR+EATVG  VPENDGRRHALTLTVSDYKR
Sbjct: 596  LHNFELPISLAMLQKFGGALGAQAGFLARKQRIEATVGRQVPENDGRRHALTLTVSDYKR 655

Query: 147  RRGLL 133
            RRGLL
Sbjct: 656  RRGLL 660


>ref|XP_004149150.1| PREDICTED: RNA polymerase-associated protein RTF1 homolog [Cucumis
            sativus] gi|778690563|ref|XP_011653135.1| PREDICTED: RNA
            polymerase-associated protein RTF1 homolog [Cucumis
            sativus] gi|700198089|gb|KGN53247.1| hypothetical protein
            Csa_4G038650 [Cucumis sativus]
          Length = 660

 Score =  647 bits (1670), Expect = 0.0
 Identities = 357/605 (59%), Positives = 422/605 (69%), Gaps = 31/605 (5%)
 Frame = -3

Query: 1854 RKPSGSQVPLKKRLDPVERDNDGXXXXXXXXXXXXXXXXXXXXS---VGSDLYKDEDDRE 1684
            RKPSGSQVPLKKRLDP ERD+DG                        VG DLYKD+DDR 
Sbjct: 57   RKPSGSQVPLKKRLDPTERDDDGGSQEEGEDEDVGSEREGDSSDESDVGDDLYKDDDDRR 116

Query: 1683 KLSKLTELEREMILEARATKRSDRDLTEKLKKR--KGQDRKGSHPTPPTRSMRSK----- 1525
            KL+ ++EL+REMIL  RA+K++D+ L E L+ +  KG+       TPP  S R +     
Sbjct: 117  KLAGMSELQREMILSDRASKKNDKHLYESLRAKMDKGKSAPSRKETPPLPSSRIRSSARS 176

Query: 1524 AERAGALDELV-----------------KXXXXXXXXXXXXRYSPVKRRSFATTTFNXXX 1396
            A+RA A D+ +                 K            R+SP KR+ F   + +   
Sbjct: 177  ADRAAAKDDALNELRAKRLKQQDPEAHRKLRDASRGNANSRRFSPTKRKPFTAPSLSSSS 236

Query: 1395 XXXXXXXXXXXXXXXXXG--MADSDDEKTSE-SKTPTFEDIKEITIRRSKLAKWFMEPFF 1225
                                M DSDDE++   S  PTFEDIKE+TIRRSKLAKW MEPFF
Sbjct: 237  QSESESRFQSDDEGSTGDGGMIDSDDERSIPGSDGPTFEDIKEVTIRRSKLAKWLMEPFF 296

Query: 1224 DELIVGCFVRVGIGKSRSGPIYRLCMVRNVDATEPDRQYKLDNKTTYKYLNVVWGNESSA 1045
            +ELIVGCFVRVGIG+SRSGPIYRLC+VRNVDATEPDRQYKL+NK T+KYLNV+WGNE+SA
Sbjct: 297  EELIVGCFVRVGIGRSRSGPIYRLCLVRNVDATEPDRQYKLENKITHKYLNVIWGNEASA 356

Query: 1044 ARWQMAMISDSSPLKEEFEQWVREVERSDGHMLSKQEVLEKRDAIQKTNTFVYSAATVKQ 865
            ARWQMAM+SDS+PL++E++QWV+EVER+ G MLSKQ++LEK++AIQK N FVYSAATVKQ
Sbjct: 357  ARWQMAMVSDSAPLEDEYKQWVKEVERTGGRMLSKQDILEKKEAIQKVNNFVYSAATVKQ 416

Query: 864  MLQEKKSATWRPLNVAAEKDRLRRELEVAKMRDDEVEVERIKARLQELEESRQTQGNDSK 685
            MLQ+KKSA+ RPLN+AAEKDRLRRE++VA  ++DE EVERIK RLQ+LE SR+ Q  D+K
Sbjct: 417  MLQDKKSASARPLNIAAEKDRLRREMDVAVSKNDEAEVERIKTRLQQLEASRRLQMKDAK 476

Query: 684  AIRLAEMNKRNRVENFKNASEKRPVNTSLKAGEAGYDPFSRRWTRSRNYYLSNSGGDEAA 505
            AIRLAEMN++NRVENFKNASE RP+   LKAGEAGYDPFSRRWTRSRNYY+SN+G    A
Sbjct: 477  AIRLAEMNRKNRVENFKNASELRPLK-DLKAGEAGYDPFSRRWTRSRNYYVSNAGEANGA 535

Query: 504  VETNGDASAVL-EVANINVGVEXXXXXXXXXXXXXXXXXXXXGKLVDTRAPVDQGTESNL 328
             E  G++  V   + N                          GKLVDT APVD GTESN 
Sbjct: 536  AEAAGNSDNVTPALENTRTEAGGTSDAGMAATAAALEAAAGAGKLVDTNAPVDGGTESNS 595

Query: 327  LHNFELPISLAVLQKFGGAQGSQAGFMARKQRMEATVGCTVPENDGRRHALTLTVSDYKR 148
            LHNFELPISLA+LQKFGGA G+QAGF+ARKQR+EATVG  VPENDGRRHALTLTVSDYKR
Sbjct: 596  LHNFELPISLAMLQKFGGALGAQAGFLARKQRIEATVGRQVPENDGRRHALTLTVSDYKR 655

Query: 147  RRGLL 133
            RRGLL
Sbjct: 656  RRGLL 660


>ref|XP_003542767.1| PREDICTED: RNA polymerase-associated protein RTF1 homolog [Glycine
            max]
          Length = 656

 Score =  647 bits (1670), Expect = 0.0
 Identities = 356/601 (59%), Positives = 423/601 (70%), Gaps = 27/601 (4%)
 Frame = -3

Query: 1854 RKPSGSQVPLKKRLDPVERDND--GXXXXXXXXXXXXXXXXXXXXSVGSDLYKDEDDREK 1681
            RKPSGSQVPLKKRLDP ERD+D                       ++G DLYKDEDDR K
Sbjct: 57   RKPSGSQVPLKKRLDPTERDDDLGSQEEADDDGRSDHDGDSSDESNIGDDLYKDEDDRRK 116

Query: 1680 LSKLTELEREMILEARATKRSDRDLTEKL--KKRKGQDRKGSHPTPPTRSMRSKAE---- 1519
            LS++TEL+REMIL  RATK+ D++L  K+  K+ KG+       +PP  S R +A     
Sbjct: 117  LSEMTELQREMILSDRATKKDDKNLLGKIASKREKGKAAAPRKQSPPMSSSRMRASARSA 176

Query: 1518 ----RAGALDELV------------KXXXXXXXXXXXXRYSPVKRRSFATTTFNXXXXXX 1387
                +  AL+EL             +             +SP KR++F +T+ +      
Sbjct: 177  DRSAKNDALNELRAKRLKQQDPEAHRRLREASRNAGPRHFSPPKRKTFTSTSLSSSSHSE 236

Query: 1386 XXXXXXXXXXXXXXG--MADSDDEKT-SESKTPTFEDIKEITIRRSKLAKWFMEPFFDEL 1216
                             +ADSDD++  + S+ P+F+DIKEITIRRSKLAKWFMEPFF+EL
Sbjct: 237  SESRSHSDDEGSTGDGGIADSDDDRALAGSEGPSFQDIKEITIRRSKLAKWFMEPFFEEL 296

Query: 1215 IVGCFVRVGIGKSRSGPIYRLCMVRNVDATEPDRQYKLDNKTTYKYLNVVWGNESSAARW 1036
            IVGCFVRVGIG+S++GPIYRLCMV+NVDA+EPDRQYKL+NKTTYKYLNVVWGNESSAARW
Sbjct: 297  IVGCFVRVGIGRSKTGPIYRLCMVKNVDASEPDRQYKLENKTTYKYLNVVWGNESSAARW 356

Query: 1035 QMAMISDSSPLKEEFEQWVREVERSDGHMLSKQEVLEKRDAIQKTNTFVYSAATVKQMLQ 856
            QMAM+SDS+P++EEF+QWV+EV+ S G M SKQ+VLEK+ AIQK  TFVYSAATVKQMLQ
Sbjct: 357  QMAMVSDSAPMEEEFKQWVKEVDCSGGRMPSKQDVLEKKQAIQKAITFVYSAATVKQMLQ 416

Query: 855  EKKSATWRPLNVAAEKDRLRRELEVAKMRDDEVEVERIKARLQELEESRQTQGNDSKAIR 676
            EKKSA+ RPLNVAAEKDRLRRELE+A+ + DE EVERIK RLQELE SRQ +  D+KA++
Sbjct: 417  EKKSASTRPLNVAAEKDRLRRELEIAQSKHDEAEVERIKTRLQELEASRQAKQKDAKALK 476

Query: 675  LAEMNKRNRVENFKNASEKRPVNTSLKAGEAGYDPFSRRWTRSRNYYLSNSGGDEAAVET 496
            LAEMN++NR ENFKNASE +PVN  LKAGEAGYDPFSRRWTRSRNYY +   G++AA   
Sbjct: 477  LAEMNRKNRFENFKNASELKPVNIGLKAGEAGYDPFSRRWTRSRNYYAAKP-GEKAAAGN 535

Query: 495  NGDASAVLEVANINVGVEXXXXXXXXXXXXXXXXXXXXGKLVDTRAPVDQGTESNLLHNF 316
            N     V    +   G                      GKLVDT APVDQGTESN+LHNF
Sbjct: 536  NIVNGNVAGAGSNATGAPVTAEAGMVATAAALEAAAGAGKLVDTSAPVDQGTESNMLHNF 595

Query: 315  ELPISLAVLQKFGGAQGSQAGFMARKQRMEATVGCTVPENDGRRHALTLTVSDYKRRRGL 136
            ELPISLA+LQK+GGA G+QAGFMARKQR+E+TVG  V ENDGRRHALTLTVSDYKRRRGL
Sbjct: 596  ELPISLALLQKYGGAPGAQAGFMARKQRIESTVGFRVSENDGRRHALTLTVSDYKRRRGL 655

Query: 135  L 133
            L
Sbjct: 656  L 656


>ref|XP_007159299.1| hypothetical protein PHAVU_002G226300g [Phaseolus vulgaris]
            gi|561032714|gb|ESW31293.1| hypothetical protein
            PHAVU_002G226300g [Phaseolus vulgaris]
          Length = 654

 Score =  645 bits (1665), Expect = 0.0
 Identities = 355/602 (58%), Positives = 423/602 (70%), Gaps = 28/602 (4%)
 Frame = -3

Query: 1854 RKPSGSQVPLKKRLDPVERDND---GXXXXXXXXXXXXXXXXXXXXSVGSDLYKDEDDRE 1684
            RKPSGSQVPLKKRLDP ERD+D                        ++G DLYKDEDDR 
Sbjct: 57   RKPSGSQVPLKKRLDPSERDDDLGSQEEADDDDGHSDHDGDSSDESNIGDDLYKDEDDRR 116

Query: 1683 KLSKLTELEREMILEARATKRSDRDLTEKL--KKRKGQDRKGSHPTPPTRSMRSKAE--- 1519
            KLS++TEL+REMIL  RATK+ D++L  K+  K+ KG+       +PP  S R +A    
Sbjct: 117  KLSEMTELQREMILSDRATKKDDKNLLGKIASKREKGKVSVPRKQSPPMSSSRMRASARS 176

Query: 1518 -----RAGALDELV------------KXXXXXXXXXXXXRYSPVKRRSFATTTFNXXXXX 1390
                 +  AL+EL             +             +SP KR+ F +T+ +     
Sbjct: 177  ADRSAKNDALNELRAKRLKQQDPEAHRKLREASRNAGPRHFSPPKRKPFTSTSLSSSSHS 236

Query: 1389 XXXXXXXXXXXXXXXG--MADSDDEKT-SESKTPTFEDIKEITIRRSKLAKWFMEPFFDE 1219
                              + DSDD++  + S+ P+F+DIKEITIRRSKLAKWFMEPFF+E
Sbjct: 237  ESESRSHSDDEGSTGDGGIGDSDDDRALTGSEGPSFQDIKEITIRRSKLAKWFMEPFFEE 296

Query: 1218 LIVGCFVRVGIGKSRSGPIYRLCMVRNVDATEPDRQYKLDNKTTYKYLNVVWGNESSAAR 1039
            LIVGCFVRVGIG+S++GPIYRLCMV+NVDA+EPDRQYKL+NKTTYKYLNVVWGNESSAAR
Sbjct: 297  LIVGCFVRVGIGRSKTGPIYRLCMVKNVDASEPDRQYKLENKTTYKYLNVVWGNESSAAR 356

Query: 1038 WQMAMISDSSPLKEEFEQWVREVERSDGHMLSKQEVLEKRDAIQKTNTFVYSAATVKQML 859
            WQMAM+SDS+PL+EEF+QWV+EV+RS G M +KQ+VLEK+ AIQK  TFVYSAATVKQML
Sbjct: 357  WQMAMVSDSAPLEEEFKQWVKEVDRSGGRMPTKQDVLEKKQAIQKAITFVYSAATVKQML 416

Query: 858  QEKKSATWRPLNVAAEKDRLRRELEVAKMRDDEVEVERIKARLQELEESRQTQGNDSKAI 679
            QEKKSA+ RPLNVAAEKDRLRRELE+A+ + DE EV+RIKARLQELE SR  +  D+KA+
Sbjct: 417  QEKKSASTRPLNVAAEKDRLRRELEIAQSKHDEAEVDRIKARLQELEASRHAKQKDAKAL 476

Query: 678  RLAEMNKRNRVENFKNASEKRPVNTSLKAGEAGYDPFSRRWTRSRNYYLSNSGGDEAAVE 499
            +LAEMN++NR ENFKNASE +PVNT LKAGEAGYDPFSRRWTRSRNYY     G++AA  
Sbjct: 477  KLAEMNRKNRFENFKNASELKPVNTGLKAGEAGYDPFSRRWTRSRNYYT----GEKAAAG 532

Query: 498  TNGDASAVLEVANINVGVEXXXXXXXXXXXXXXXXXXXXGKLVDTRAPVDQGTESNLLHN 319
             N     V      + G                      GKLVDT APVDQGTESN+LHN
Sbjct: 533  NNSVNGIVAGPGTNSTGAPVTAEAGLVATAAALEAAADAGKLVDTSAPVDQGTESNMLHN 592

Query: 318  FELPISLAVLQKFGGAQGSQAGFMARKQRMEATVGCTVPENDGRRHALTLTVSDYKRRRG 139
            FELPISLA+LQK+GGAQG+QAGFMARKQR+E+TVG  V ENDGRRH+LTL+VSDYKRRRG
Sbjct: 593  FELPISLALLQKYGGAQGAQAGFMARKQRIESTVGFRVLENDGRRHSLTLSVSDYKRRRG 652

Query: 138  LL 133
            LL
Sbjct: 653  LL 654


>ref|XP_008228301.1| PREDICTED: LOW QUALITY PROTEIN: RNA polymerase-associated protein
            RTF1 homolog [Prunus mume]
          Length = 648

 Score =  644 bits (1662), Expect = 0.0
 Identities = 351/603 (58%), Positives = 419/603 (69%), Gaps = 29/603 (4%)
 Frame = -3

Query: 1854 RKPSGSQVPLKKRLDPVERDND--GXXXXXXXXXXXXXXXXXXXXSVGSDLYKDEDDREK 1681
            RKPSG+QVPLKKRLDP E D++                        VGSDLYKDEDDR K
Sbjct: 49   RKPSGTQVPLKKRLDPTEMDDEQGSQEEGDYNDSGSDRGGDSNESDVGSDLYKDEDDRRK 108

Query: 1680 LSKLTELEREMILEARATKRSDRDLTEKLKKR--KGQDRKGSHPTPP-----TRSMRSKA 1522
            L++++EL+RE+IL  RA K+ D+ L EK + +  KG+       TPP      RS    A
Sbjct: 109  LAEMSELQRELILSDRAQKKDDKSLKEKFRPKWDKGKTTHSRKETPPLPSSRVRSSARSA 168

Query: 1521 ERAGALDELV-----------------KXXXXXXXXXXXXRYSPVKRRSFATT--TFNXX 1399
            +RA A D+ +                 K             +S + R+SF     + +  
Sbjct: 169  DRAAAKDDALNELRAKRLKQQDPEAHRKLRDASRGSSGSRSFSHMTRKSFTAVGRSSSSQ 228

Query: 1398 XXXXXXXXXXXXXXXXXXGMADSDDEKTSESKTPTFEDIKEITIRRSKLAKWFMEPFFDE 1219
                               M DSDDE+   S+  TF+DIKEITIRRSKLAKW MEPFF+E
Sbjct: 229  SDSDSRSHSEDEGSTGEDAMMDSDDER---SEGLTFDDIKEITIRRSKLAKWLMEPFFEE 285

Query: 1218 LIVGCFVRVGIGKSRSGPIYRLCMVRNVDATEPDRQYKLDNKTTYKYLNVVWGNESSAAR 1039
            LIVGCFVRVGIG+S+SGPIYRLCMVRNVDA++PDR+YKL+NKTT+KYLNVVWGNE+SAAR
Sbjct: 286  LIVGCFVRVGIGRSKSGPIYRLCMVRNVDASDPDRKYKLENKTTHKYLNVVWGNENSAAR 345

Query: 1038 WQMAMISDSSPLKEEFEQWVREVERSDGHMLSKQEVLEKRDAIQKTNTFVYSAATVKQML 859
            WQMAMISDS+P++EEF+QWVREVERS G + SKQ+VLEK++AI+K NTFVYSAATVKQM+
Sbjct: 346  WQMAMISDSAPVEEEFKQWVREVERSGGRLPSKQDVLEKKEAIKKINTFVYSAATVKQMI 405

Query: 858  QEKKSATWRPLNVAAEKDRLRRELEVAKMRDDEVEVERIKARLQELEESRQTQGNDSKAI 679
            +EKKSA+ RPLN+A EKDRLRRELEVA+ + D+ EV+RIK RLQ+LE  RQ+QG DSKA+
Sbjct: 406  EEKKSASSRPLNIALEKDRLRRELEVAQSKHDDAEVDRIKTRLQQLEARRQSQGKDSKAV 465

Query: 678  RLAEMNKRNRVENFKNASEKRPVNTSLKAGEAGYDPFSRRWTRSRNYYLSNSGGDEAAVE 499
            RLAEMN++NRVENFKNASE +PV T LKAGEAGYDPFSRRWTRSRNYY+S  G  +   E
Sbjct: 466  RLAEMNRKNRVENFKNASELKPVKTGLKAGEAGYDPFSRRWTRSRNYYVSKPGEQKGEAE 525

Query: 498  TNGDA-SAVLEVANINVGVEXXXXXXXXXXXXXXXXXXXXGKLVDTRAPVDQGTESNLLH 322
               DA  A+ ++ +    V                     GKL+DT APVD GTESNL+H
Sbjct: 526  AIVDADGALADIESNGTAVVGAVRAGMAATAAALEAAAGAGKLIDTSAPVDFGTESNLMH 585

Query: 321  NFELPISLAVLQKFGGAQGSQAGFMARKQRMEATVGCTVPENDGRRHALTLTVSDYKRRR 142
            NFELPISLA LQKFGG QG+Q GF+ARKQR+EATVGC VPENDGRRHALTLTVSDYKRRR
Sbjct: 586  NFELPISLATLQKFGGPQGAQEGFLARKQRIEATVGCRVPENDGRRHALTLTVSDYKRRR 645

Query: 141  GLL 133
            GLL
Sbjct: 646  GLL 648


>gb|EPS59875.1| hypothetical protein M569_14929 [Genlisea aurea]
          Length = 643

 Score =  643 bits (1658), Expect = 0.0
 Identities = 355/594 (59%), Positives = 417/594 (70%), Gaps = 3/594 (0%)
 Frame = -3

Query: 1854 RKPSGSQVPLKKRLDPVERDNDGXXXXXXXXXXXXXXXXXXXXSVGSDLYKDEDDREKLS 1675
            RKPS SQVPLKKR DP +RD+                       +GSDLYKDE+DREKLS
Sbjct: 54   RKPSSSQVPLKKRFDPTDRDDRSSQDGDEINSNHERDSDNDT--IGSDLYKDEEDREKLS 111

Query: 1674 KLTELEREMILEARATKRSDRDLTEKLKKRKGQDRKGSHPTPPTRSM-RSKAERAGALDE 1498
            KLTELEREMILE RATK SDRDLTEKLKKRKG D+K S     TRS  RSKAERAGALDE
Sbjct: 112  KLTELEREMILEGRATKISDRDLTEKLKKRKGHDKKLSPAKAHTRSSTRSKAERAGALDE 171

Query: 1497 LVKXXXXXXXXXXXXR-YSPVKRRSFATTTFNXXXXXXXXXXXXXXXXXXXXGMADSDDE 1321
            LVK              YSPVKRRSF   T +                    G+ DSD++
Sbjct: 172  LVKRRRDAVKGGTTRSRYSPVKRRSFTAATLSSPSHSDSRSQSGEGESTGDGGIGDSDED 231

Query: 1320 KT-SESKTPTFEDIKEITIRRSKLAKWFMEPFFDELIVGCFVRVGIGKSRSGPIYRLCMV 1144
            KT S+S  PTF+DIKEIT++RSKL KWFMEPFFDELI+GCFV+VGIGKSRSG +YRLC+V
Sbjct: 232  KTQSQSNVPTFDDIKEITVQRSKLLKWFMEPFFDELIIGCFVKVGIGKSRSGNVYRLCVV 291

Query: 1143 RNVDATEPDRQYKLDNKTTYKYLNVVWGNESSAARWQMAMISDSSPLKEEFEQWVREVER 964
            RNVD+++P R Y  +N+ T+KYL++VWG+ESSAARWQM MIS+ +P +EEF+ W +EVER
Sbjct: 292  RNVDSSDPSRAYDFENRKTHKYLSLVWGSESSAARWQMKMISNEAPKREEFDLWFKEVER 351

Query: 963  SDGHMLSKQEVLEKRDAIQKTNTFVYSAATVKQMLQEKKSATWRPLNVAAEKDRLRRELE 784
            + G+M ++QEV EKR+A+Q+ N FVYSAATVKQM+QEKKSAT +P+NVA EKDRLRR +E
Sbjct: 352  TGGNMPTRQEVSEKREALQRINRFVYSAATVKQMVQEKKSATHKPINVALEKDRLRRAME 411

Query: 783  VAKMRDDEVEVERIKARLQELEESRQTQGNDSKAIRLAEMNKRNRVENFKNASEKRPVNT 604
            VA+  DD  E++ I+ +L ELE SR+    DSKA +LAEMN +NR  NFKNASE +PVNT
Sbjct: 412  VARENDDHDEMKEIQRKLSELESSRKVPEKDSKAAKLAEMNSKNRKANFKNASEMKPVNT 471

Query: 603  SLKAGEAGYDPFSRRWTRSRNYYLSNSGGDEAAVETNGDASAVLEVANINVGVEXXXXXX 424
            SLKAGE GYDPFSRRWTRSRNYY+SN+       E NG A+ V  VA     +E      
Sbjct: 472  SLKAGEVGYDPFSRRWTRSRNYYVSNAA--TGIGEANGSAN-VASVAATAAALE------ 522

Query: 423  XXXXXXXXXXXXXXGKLVDTRAPVDQGTESNLLHNFELPISLAVLQKFGGAQGSQAGFMA 244
                          GKLVDT APVDQGTESNLLH+FELPISLA LQ+ GG QG+QAG MA
Sbjct: 523  ---------AAAGAGKLVDTNAPVDQGTESNLLHDFELPISLAALQRLGGPQGAQAGLMA 573

Query: 243  RKQRMEATVGCTVPENDGRRHALTLTVSDYKRRRGLL*NLVLASHLFYLLECFL 82
            RKQ +EA  G  VPENDGRRHALTLTVSDYKRRR  L    +   L  +  C+L
Sbjct: 574  RKQWIEANYGVKVPENDGRRHALTLTVSDYKRRRDPLTMCPIPLALRAIESCYL 627