BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Forsythia21_contig00011867
         (622 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CDX83624.1| BnaC07g23640D [Brassica napus]                         40   9e-08
ref|XP_009624486.1| PREDICTED: probable pre-mRNA-splicing factor...    58   4e-06
ref|XP_010272472.1| PREDICTED: probable pre-mRNA-splicing factor...    57   7e-06

>emb|CDX83624.1| BnaC07g23640D [Brassica napus]
          Length = 1115

 Score = 39.7 bits (91), Expect(3) = 9e-08
 Identities = 18/30 (60%), Positives = 23/30 (76%)
 Frame = -1

Query: 94  GYYKPELYKVYKGRVSRVMDT*WFIQLYEF 5
           G  +PELY+VYKGRV+RVMD+  F+Q   F
Sbjct: 153 GANEPELYQVYKGRVTRVMDSGCFVQFDRF 182



 Score = 36.2 bits (82), Expect(3) = 9e-08
 Identities = 32/112 (28%), Positives = 44/112 (39%)
 Frame = -2

Query: 438 GRNCKTMDEFDAKLKDYGAEIMDCFVECCRQELXXXXXXXXXXXRKNPHSQH*MRIIRRE 259
           GRN +T DE D KLK  GAE+ D FV      +                        R E
Sbjct: 41  GRNSETSDELDKKLKKDGAELPDYFVRSLLTVIHGIYPPQPKFKGLAIRDTKDKERQREE 100

Query: 258 *RNWRGRLKRTERIEGKRRKMKFKKSIGMEMATEERGEGRQERDMGKGIDME 103
            RN RG  +  +R +  RR     ++ G E   + R    + RD  +G+  E
Sbjct: 101 DRNRRGSGRDRDRDD--RRDRHRDRNRGDEDGDDRRSGRHRGRDRDRGVQDE 150



 Score = 26.6 bits (57), Expect(3) = 9e-08
 Identities = 11/18 (61%), Positives = 12/18 (66%)
 Frame = -3

Query: 521 LVSKVCTELENHLGFGDK 468
           LVS +C ELE HLG   K
Sbjct: 14  LVSNICNELETHLGQAPK 31


>ref|XP_009624486.1| PREDICTED: probable pre-mRNA-splicing factor ATP-dependent RNA
           helicase [Nicotiana tomentosiformis]
          Length = 1217

 Score = 57.8 bits (138), Expect = 4e-06
 Identities = 46/151 (30%), Positives = 72/151 (47%), Gaps = 3/151 (1%)
 Frame = -2

Query: 570 MGAEIKDYGLRKLEYLSGFQSMYGARKSFRVWR*KFWRSL*QIWGRNCKTMDEFDAKLKD 391
           MGAE+++ GL+KLEYLS    +    ++   +  K         GR C T+DEFD KLK+
Sbjct: 1   MGAEVEEDGLKKLEYLSLVSKVCSELETHLGFGDKVLAEFITELGRKCDTVDEFDGKLKE 60

Query: 390 YGAEIMDCFVECCRQELXXXXXXXXXXXRKNPHSQH*MRIIRRE*RNWRGRLKRTER--- 220
            GAE+ D FV      +            +N  S+        + R+ R R+K  E+   
Sbjct: 61  NGAEMPDYFVRTLLTIIHAILPPKVKSKSENELSKDDSEFSALKIRDDRDRVKELEKEIE 120

Query: 219 IEGKRRKMKFKKSIGMEMATEERGEGRQERD 127
           +E K ++ K ++    E   + R + R+ERD
Sbjct: 121 LEAKSKRGKDEE----EDFDKNRRDRRRERD 147


>ref|XP_010272472.1| PREDICTED: probable pre-mRNA-splicing factor ATP-dependent RNA
           helicase [Nelumbo nucifera]
          Length = 1215

 Score = 57.0 bits (136), Expect = 7e-06
 Identities = 32/70 (45%), Positives = 42/70 (60%)
 Frame = -2

Query: 570 MGAEIKDYGLRKLEYLSGFQSMYGARKSFRVWR*KFWRSL*QIWGRNCKTMDEFDAKLKD 391
           M  E++D GL+KLEYLS    +    +S   +  K         GRNC+T+DEFDAKLK+
Sbjct: 1   MAVEVQDEGLKKLEYLSLVSKVCTELESHLGFGDKVLAEFITDMGRNCQTVDEFDAKLKE 60

Query: 390 YGAEIMDCFV 361
            GAE+ D FV
Sbjct: 61  NGAEMPDYFV 70