BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Forsythia21_contig00011615
         (3953 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_011085923.1| PREDICTED: DNA-directed RNA polymerase III s...  2118   0.0  
ref|XP_009604369.1| PREDICTED: DNA-directed RNA polymerase III s...  1976   0.0  
ref|XP_010659064.1| PREDICTED: DNA-directed RNA polymerase III s...  1974   0.0  
ref|XP_009758465.1| PREDICTED: DNA-directed RNA polymerase III s...  1972   0.0  
ref|XP_006362214.1| PREDICTED: DNA-directed RNA polymerase III s...  1966   0.0  
ref|XP_010312066.1| PREDICTED: DNA-directed RNA polymerase III s...  1956   0.0  
ref|XP_012849950.1| PREDICTED: DNA-directed RNA polymerase III s...  1952   0.0  
ref|XP_007010799.1| DNA-directed RNA polymerase isoform 1 [Theob...  1926   0.0  
ref|XP_007010801.1| DNA-directed RNA polymerase isoform 3 [Theob...  1912   0.0  
ref|XP_006494572.1| PREDICTED: DNA-directed RNA polymerase III s...  1902   0.0  
ref|XP_006432385.1| hypothetical protein CICLE_v10000078mg [Citr...  1901   0.0  
ref|XP_010242622.1| PREDICTED: DNA-directed RNA polymerase III s...  1879   0.0  
ref|XP_010242621.1| PREDICTED: DNA-directed RNA polymerase III s...  1874   0.0  
ref|XP_012459628.1| PREDICTED: DNA-directed RNA polymerase III s...  1873   0.0  
gb|KJB75029.1| hypothetical protein B456_012G019600 [Gossypium r...  1867   0.0  
ref|XP_011003287.1| PREDICTED: DNA-directed RNA polymerase III s...  1855   0.0  
ref|XP_010043725.1| PREDICTED: DNA-directed RNA polymerase III s...  1855   0.0  
ref|XP_004141655.2| PREDICTED: DNA-directed RNA polymerase III s...  1852   0.0  
ref|XP_011003286.1| PREDICTED: DNA-directed RNA polymerase III s...  1850   0.0  
ref|XP_008462447.1| PREDICTED: DNA-directed RNA polymerase III s...  1848   0.0  

>ref|XP_011085923.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc2 [Sesamum
            indicum]
          Length = 1152

 Score = 2118 bits (5488), Expect = 0.0
 Identities = 1051/1154 (91%), Positives = 1100/1154 (95%)
 Frame = -2

Query: 3721 MGVKEEDSALLNDLQEQGLKIDKQSLAAPVKSAVDKFQLLPEFLKVRGLVKQHLDSFNYF 3542
            M V+E D AL +DL+E+ L IDKQ+LAAPVK+AVDKFQLLPEFLKVRGLVKQHLDSFNYF
Sbjct: 1    MVVRENDPAL-SDLEEKSLGIDKQALAAPVKNAVDKFQLLPEFLKVRGLVKQHLDSFNYF 59

Query: 3541 LRTQIKKIVRANDLITSRVDPSIYLRYKDVRIGEPSIIIDGVTEKLTPHKCRLADLTYAA 3362
            +RTQIKKIV+ANDLITS++DPSIYLRYKDVRIGEPS+IIDGVTEKLTPHKCRL+D+TYAA
Sbjct: 60   VRTQIKKIVQANDLITSKIDPSIYLRYKDVRIGEPSVIIDGVTEKLTPHKCRLSDITYAA 119

Query: 3361 PIYVNIEYITGSHGSKTTQMKRDVIIGRMPIMLRSCCCVLYGKDEEELARCGECPLDPGG 3182
            PIYVNIEYITGSHGSKTTQMKRDVIIGRMPIMLRSCCC+LYGKDEEELAR GECPLDPGG
Sbjct: 120  PIYVNIEYITGSHGSKTTQMKRDVIIGRMPIMLRSCCCILYGKDEEELARYGECPLDPGG 179

Query: 3181 YFVIKGTEKVILIQEQLSKNRIIIDTDKKNCVQASVTSSTEATKSKTVIKMEKEKIYLYL 3002
            YFVIKGTEKVILIQEQLSKNRIIIDTDKK CVQASVTSSTE TKSKTVI+MEKEKIYLYL
Sbjct: 180  YFVIKGTEKVILIQEQLSKNRIIIDTDKKGCVQASVTSSTEMTKSKTVIRMEKEKIYLYL 239

Query: 3001 NQFTSKVPIMMVMKAMGMESDQEVVQMIGRDPRYSELLLPSIEDCAKEAVYTQYQALEYL 2822
            NQFTSKVPIM+V+KAMGMESDQEVVQMIGRDPRYSELLLPSIEDC KEAV+TQ+QALE+L
Sbjct: 240  NQFTSKVPIMVVLKAMGMESDQEVVQMIGRDPRYSELLLPSIEDCVKEAVHTQHQALEFL 299

Query: 2821 EQKVKKLPYSNALIEKEGRALGILRDIFLANIPVQQDNFRPKCIYVAVMLRRMMEAILNK 2642
            EQKVKKLPYS    +KEGRALGILRDIFLANIPV+Q+NFRPKCIYVAVM+RR++EAILNK
Sbjct: 300  EQKVKKLPYSTPA-DKEGRALGILRDIFLANIPVRQNNFRPKCIYVAVMVRRILEAILNK 358

Query: 2641 DAMDDKDYAGNKRXXXXXXXXXXXXXXXFKTMNDEARKTIDTILAKPSRSSRFDISQFIV 2462
            DAMDDKDY GNKR               FKTMNDEARKTIDTILAKPSRSSRFDISQFIV
Sbjct: 359  DAMDDKDYVGNKRLELSGQLLSLLFEDLFKTMNDEARKTIDTILAKPSRSSRFDISQFIV 418

Query: 2461 KDSITVGLERTLSTGNWDVKRFRMHRKGMTQVVARLSYIGTLGHMTKVSPQFEKSRKVSG 2282
            KDSITVGLERTLSTGNWDVKRFRMHRKGMTQVVARLSYIGTLGHMTK+SPQFEKSRKVSG
Sbjct: 419  KDSITVGLERTLSTGNWDVKRFRMHRKGMTQVVARLSYIGTLGHMTKISPQFEKSRKVSG 478

Query: 2281 PRALQPSQWGMLCPCDTPEGEACGLVKNLALMTHVTTDEDEAPLVSLCYSLGVEDLELLS 2102
            PRALQPSQWGMLCPCDTPEGEACGLVKNLALMTHVTTD+DE PL+SLCYSLGVEDLELLS
Sbjct: 479  PRALQPSQWGMLCPCDTPEGEACGLVKNLALMTHVTTDDDEGPLISLCYSLGVEDLELLS 538

Query: 2101 GEELHMPNSYLIILNGLILGKHRRPQWFANAMRKLRRAAKIGEFVSIFVNEKQRCVYIAS 1922
            GEELHMPNSYLIILNGLILGKHRRPQ FA AMRKLRR+ KIGEFVSIFVNEKQ  VYIAS
Sbjct: 539  GEELHMPNSYLIILNGLILGKHRRPQRFAKAMRKLRRSGKIGEFVSIFVNEKQHSVYIAS 598

Query: 1921 DGGRVCRPLVIADKGVPRIKEHHMKELRDGVRTFNSFLKDGLIEYLDVNEENNALIALYE 1742
            DGGRVCRPLVIADKGV RIKEHHMKEL+DGVR F+SFLK+GLIEYLDVNEENNALIALYE
Sbjct: 599  DGGRVCRPLVIADKGVSRIKEHHMKELKDGVRNFDSFLKEGLIEYLDVNEENNALIALYE 658

Query: 1741 ENAKEGTTHIEIEPFTILGVCAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNELTRMDT 1562
            ENA E TTHIEIEPFTILG+ AGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYN+L RMDT
Sbjct: 659  ENANERTTHIEIEPFTILGIIAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNQLRRMDT 718

Query: 1561 LIYLLVYPQRPLLTTRTIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFG 1382
            LIYLLVYPQRPLLTTRTIELV +DKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFG
Sbjct: 719  LIYLLVYPQRPLLTTRTIELVRFDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFG 778

Query: 1381 RCIVMKKMAAISQKYENGTSDRIIRPQREGYEAERMQILDDDGLAAPGEIIRPHDIYINK 1202
            RCIV+KKM A+SQKYENGTSDRI+RP REGYEAERMQILDDDGLAAPGEIIRPHDIYINK
Sbjct: 779  RCIVIKKMTAVSQKYENGTSDRILRPPREGYEAERMQILDDDGLAAPGEIIRPHDIYINK 838

Query: 1201 ESPTITRGPVTSPMGLPDSAYKPSRQTYKGPEGETAVVDRVSLCSDKNSNLCIKFMIRHT 1022
            ESP +TRGPVTSPMGLPDSAYKPSRQTYKGP+GET VVDRV+LCSD+N+NLCIKFMIRHT
Sbjct: 839  ESPIVTRGPVTSPMGLPDSAYKPSRQTYKGPDGETPVVDRVALCSDRNNNLCIKFMIRHT 898

Query: 1021 RRPEVGDKFSSRHGQKGVCGTIVQQEDLPFSERGICPDLIMNPHGFPSRMTVGKMIELLG 842
            RRPE+GDKFSSRHGQKGVCG IVQQED PFSERGICPDLIMNPHGFPSRMTVGKMIELLG
Sbjct: 899  RRPELGDKFSSRHGQKGVCGNIVQQEDFPFSERGICPDLIMNPHGFPSRMTVGKMIELLG 958

Query: 841  SKAGVSSGRFHYGSAFGEPSGHADRVEAISETLVKHGFSYSGKDFIYSGITGEPLQAYIF 662
             KAGVS GRFHYGSAFGEPSGHAD+VEAISETLVKHGFSY+GKDFIYSGITGEPLQAYIF
Sbjct: 959  GKAGVSCGRFHYGSAFGEPSGHADKVEAISETLVKHGFSYNGKDFIYSGITGEPLQAYIF 1018

Query: 661  MGPIYYQKLKHMVLDKMHARGSGPRVMITRQPTEGRSRNGGLRVGEMERDCLIAYGASML 482
            MGPIYYQKLKHMVLDKMHARGSGPRVMITRQPTEGRSRNGGLRVGEMERDCLIAYGASML
Sbjct: 1019 MGPIYYQKLKHMVLDKMHARGSGPRVMITRQPTEGRSRNGGLRVGEMERDCLIAYGASML 1078

Query: 481  IYERLMISSDPFEVQVCRKCGLLGYYNFKLKTANCSTCKNGDNISTMKLPYACKLLFQEL 302
            IYERLMISSDPFEVQVCRKCGLLGYYNFKLKT  CSTCKNG+NISTMKLPYACKLL QEL
Sbjct: 1079 IYERLMISSDPFEVQVCRKCGLLGYYNFKLKTGICSTCKNGENISTMKLPYACKLLIQEL 1138

Query: 301  QAMNIVPRLKLTEA 260
            QAMNI+PRLKLTEA
Sbjct: 1139 QAMNIIPRLKLTEA 1152


>ref|XP_009604369.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC2 [Nicotiana
            tomentosiformis]
          Length = 1155

 Score = 1976 bits (5119), Expect = 0.0
 Identities = 979/1151 (85%), Positives = 1046/1151 (90%), Gaps = 2/1151 (0%)
 Frame = -2

Query: 3706 EDSALLNDLQEQGLKIDKQSLAAPVKSAVDKFQLLPEFLKVRGLVKQHLDSFNYFLRTQI 3527
            +DS + N   +    IDKQ LA+P+K+ VDK+QL+PEFLKVRGLVKQHLDSFNYF++T+I
Sbjct: 5    DDSTMSNPTNDLSHGIDKQYLASPIKNLVDKYQLVPEFLKVRGLVKQHLDSFNYFVKTEI 64

Query: 3526 KKIVRANDLITSRVDPSIYLRYKDVRIGEPSIIIDGVTEKLTPHKCRLADLTYAAPIYVN 3347
            KKIV+AN  I S +DP+IYL+Y DV IGEPSI++DGVTEKL P KCRL DLTYAAPIYV+
Sbjct: 65   KKIVQANKEIRSILDPNIYLKYNDVHIGEPSIMVDGVTEKLNPQKCRLCDLTYAAPIYVD 124

Query: 3346 IEYITGSHGSKTTQMKRDVIIGRMPIMLRSCCCVLYGKDEEELARCGECPLDPGGYFVIK 3167
            IEY TGSHG  + Q K++V IGRMP+MLRSCCCVLYGKDEEELA+ GECPLDPGGYFVIK
Sbjct: 125  IEYTTGSHGQISVQTKKNVTIGRMPVMLRSCCCVLYGKDEEELAKLGECPLDPGGYFVIK 184

Query: 3166 GTEKVILIQEQLSKNRIIIDTDKKNCVQASVTSSTEATKSKTVIKMEKEKIYLYLNQFTS 2987
            GTEKVILIQEQLSKNRIIIDTDKK CVQASVTSSTE TKSKT++KMEKEK+YL LN F +
Sbjct: 185  GTEKVILIQEQLSKNRIIIDTDKKGCVQASVTSSTEKTKSKTIVKMEKEKVYLELNMFKT 244

Query: 2986 KVPIMMVMKAMGMESDQEVVQMIGRDPRYSELLLPSIEDCAKEAVYTQYQALEYLE--QK 2813
            KVPIM+VMKAMGMESDQEVVQMIGRDPR+S LLLPSIE+CA   VYTQ+QALE+LE  + 
Sbjct: 245  KVPIMIVMKAMGMESDQEVVQMIGRDPRFSALLLPSIEECADLKVYTQHQALEFLESDKM 304

Query: 2812 VKKLPYSNALIEKEGRALGILRDIFLANIPVQQDNFRPKCIYVAVMLRRMMEAILNKDAM 2633
            +K   YS   +EK  RAL ILRDIFLAN+PV Q NFR KCIYVAVM+RRMMEAILNKDAM
Sbjct: 305  LKMSSYSAGPVEKGARALSILRDIFLANVPVHQHNFRKKCIYVAVMMRRMMEAILNKDAM 364

Query: 2632 DDKDYAGNKRXXXXXXXXXXXXXXXFKTMNDEARKTIDTILAKPSRSSRFDISQFIVKDS 2453
            DDKDY GNKR               FKTMNDEARKT+D +LA+PSRSSR DIS FI KDS
Sbjct: 365  DDKDYVGNKRLELSGQLLSLLFEDLFKTMNDEARKTVDALLARPSRSSRLDISPFIAKDS 424

Query: 2452 ITVGLERTLSTGNWDVKRFRMHRKGMTQVVARLSYIGTLGHMTKVSPQFEKSRKVSGPRA 2273
            ITVG+ERTLSTGNWDVKRFRMHRKGMTQVVARLSYIG+LGHMTK+SPQFEKSRKVSGPRA
Sbjct: 425  ITVGMERTLSTGNWDVKRFRMHRKGMTQVVARLSYIGSLGHMTKISPQFEKSRKVSGPRA 484

Query: 2272 LQPSQWGMLCPCDTPEGEACGLVKNLALMTHVTTDEDEAPLVSLCYSLGVEDLELLSGEE 2093
            LQPSQWGMLCPCDTPEGEACGLVKNLALMTHVTTDEDE P++SLCY LGVEDLE LS EE
Sbjct: 485  LQPSQWGMLCPCDTPEGEACGLVKNLALMTHVTTDEDEHPIISLCYCLGVEDLEQLSAEE 544

Query: 2092 LHMPNSYLIILNGLILGKHRRPQWFANAMRKLRRAAKIGEFVSIFVNEKQRCVYIASDGG 1913
            LHMP+SYLIILNGLILGKHR PQ FANAMRKLRRA KIGEF+SIFVNEKQR VYIASDGG
Sbjct: 545  LHMPSSYLIILNGLILGKHRSPQRFANAMRKLRRAGKIGEFISIFVNEKQRSVYIASDGG 604

Query: 1912 RVCRPLVIADKGVPRIKEHHMKELRDGVRTFNSFLKDGLIEYLDVNEENNALIALYEENA 1733
            RVCRPLVIADKGV RIKE HMKELRDGVR F+SFLKDGLIEYLDVNEENN+LIALYE+ A
Sbjct: 605  RVCRPLVIADKGVSRIKEQHMKELRDGVRNFDSFLKDGLIEYLDVNEENNSLIALYEKEA 664

Query: 1732 KEGTTHIEIEPFTILGVCAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNELTRMDTLIY 1553
               TTHIEIEPFTILGVCAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYN+L+RMDTLIY
Sbjct: 665  TPETTHIEIEPFTILGVCAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNQLSRMDTLIY 724

Query: 1552 LLVYPQRPLLTTRTIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCI 1373
            LLVYPQRPLLTTRTIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCI
Sbjct: 725  LLVYPQRPLLTTRTIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCI 784

Query: 1372 VMKKMAAISQKYENGTSDRIIRPQREGYEAERMQILDDDGLAAPGEIIRPHDIYINKESP 1193
            VMKK +A   KYEN TSDRII+PQR+GYEAERMQILD+DGLA+PGEIIRPHDIYINKESP
Sbjct: 785  VMKKYSATCLKYENNTSDRIIKPQRQGYEAERMQILDEDGLASPGEIIRPHDIYINKESP 844

Query: 1192 TITRGPVTSPMGLPDSAYKPSRQTYKGPEGETAVVDRVSLCSDKNSNLCIKFMIRHTRRP 1013
            T+TR PV+SPM LPDSAYKPSRQTYKGPEGET VVDRV+L SDKN+NLCIKFMIRHTRRP
Sbjct: 845  TVTRTPVSSPMSLPDSAYKPSRQTYKGPEGETPVVDRVALHSDKNNNLCIKFMIRHTRRP 904

Query: 1012 EVGDKFSSRHGQKGVCGTIVQQEDLPFSERGICPDLIMNPHGFPSRMTVGKMIELLGSKA 833
            E+GDKFSSRHGQKGVCGTIVQQED PFSERGICPDLIMNPHGFPSRMTVGKMIELLGSKA
Sbjct: 905  EIGDKFSSRHGQKGVCGTIVQQEDFPFSERGICPDLIMNPHGFPSRMTVGKMIELLGSKA 964

Query: 832  GVSSGRFHYGSAFGEPSGHADRVEAISETLVKHGFSYSGKDFIYSGITGEPLQAYIFMGP 653
            GVS GRFHYGSAFGEPSGHAD V+ ISETLVKHGFSY+GKDFIYSGITG PLQAYIFMGP
Sbjct: 965  GVSCGRFHYGSAFGEPSGHADTVDTISETLVKHGFSYNGKDFIYSGITGMPLQAYIFMGP 1024

Query: 652  IYYQKLKHMVLDKMHARGSGPRVMITRQPTEGRSRNGGLRVGEMERDCLIAYGASMLIYE 473
            IYYQKLKHMVLDKMHARGSGPRVMITRQPTEGRSRNGGLRVGEMERDCLIAYGASMLIYE
Sbjct: 1025 IYYQKLKHMVLDKMHARGSGPRVMITRQPTEGRSRNGGLRVGEMERDCLIAYGASMLIYE 1084

Query: 472  RLMISSDPFEVQVCRKCGLLGYYNFKLKTANCSTCKNGDNISTMKLPYACKLLFQELQAM 293
            RLMISSDPFEVQVCRKCGLLGYYN+KLKT  CS CKNG+NISTMKLPYACKLL QELQ+M
Sbjct: 1085 RLMISSDPFEVQVCRKCGLLGYYNYKLKTGICSMCKNGENISTMKLPYACKLLIQELQSM 1144

Query: 292  NIVPRLKLTEA 260
            NIVPRLKL EA
Sbjct: 1145 NIVPRLKLAEA 1155


>ref|XP_010659064.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC2 [Vitis
            vinifera] gi|731414225|ref|XP_010659065.1| PREDICTED:
            DNA-directed RNA polymerase III subunit RPC2 [Vitis
            vinifera]
          Length = 1157

 Score = 1974 bits (5115), Expect = 0.0
 Identities = 967/1140 (84%), Positives = 1046/1140 (91%)
 Frame = -2

Query: 3679 QEQGLKIDKQSLAAPVKSAVDKFQLLPEFLKVRGLVKQHLDSFNYFLRTQIKKIVRANDL 3500
            +++ + I K   A PVK AVDKF LLPEFLKVRGLVKQHLDSFNYF++T IKKIVRAND 
Sbjct: 18   KQEEMSIHKHFPADPVKQAVDKFPLLPEFLKVRGLVKQHLDSFNYFVKTDIKKIVRANDR 77

Query: 3499 ITSRVDPSIYLRYKDVRIGEPSIIIDGVTEKLTPHKCRLADLTYAAPIYVNIEYITGSHG 3320
            I S VDPSIYLR+KDVRIGEPSI +DG++EKL PH CRL+D+TYAAPI VNIEYITGSH 
Sbjct: 78   IVSSVDPSIYLRFKDVRIGEPSITVDGISEKLNPHTCRLSDMTYAAPILVNIEYITGSHV 137

Query: 3319 SKTTQMKRDVIIGRMPIMLRSCCCVLYGKDEEELARCGECPLDPGGYFVIKGTEKVILIQ 3140
             KT   K DV+IGRMPIMLRSCCCVLY KDE ELAR GECPLDPGGYFV+KGTEKVILIQ
Sbjct: 138  QKTRVEKNDVVIGRMPIMLRSCCCVLYKKDEAELARLGECPLDPGGYFVVKGTEKVILIQ 197

Query: 3139 EQLSKNRIIIDTDKKNCVQASVTSSTEATKSKTVIKMEKEKIYLYLNQFTSKVPIMMVMK 2960
            EQLSKNRIIIDTDKK  + ASVTSSTE+TKSKTVI MEKEKI+L LNQFTSK+PIM+VMK
Sbjct: 198  EQLSKNRIIIDTDKKGNINASVTSSTESTKSKTVIVMEKEKIWLQLNQFTSKIPIMIVMK 257

Query: 2959 AMGMESDQEVVQMIGRDPRYSELLLPSIEDCAKEAVYTQYQALEYLEQKVKKLPYSNALI 2780
            AMGMESDQEVVQM+GR+PRYS LLLPS+E+CA   +YTQ QALE+LE+KVKKLP+ N  +
Sbjct: 258  AMGMESDQEVVQMVGRNPRYSALLLPSMEECASHGIYTQQQALEFLERKVKKLPFYNPSL 317

Query: 2779 EKEGRALGILRDIFLANIPVQQDNFRPKCIYVAVMLRRMMEAILNKDAMDDKDYAGNKRX 2600
            EKEGR + ILRD F+AN+PV+Q+NFRPKC+YVAVMLRRMM+AILNKDAMDDKDY GNKR 
Sbjct: 318  EKEGRGMAILRDTFIANVPVRQNNFRPKCLYVAVMLRRMMDAILNKDAMDDKDYVGNKRL 377

Query: 2599 XXXXXXXXXXXXXXFKTMNDEARKTIDTILAKPSRSSRFDISQFIVKDSITVGLERTLST 2420
                          FKTM  E +KTID ILAKPSRSSRFD SQFIV+DSITVGLERTLST
Sbjct: 378  ELSGQLISLLFEDLFKTMISEVKKTIDAILAKPSRSSRFDFSQFIVRDSITVGLERTLST 437

Query: 2419 GNWDVKRFRMHRKGMTQVVARLSYIGTLGHMTKVSPQFEKSRKVSGPRALQPSQWGMLCP 2240
            GNWDVKRFRMHRKGM+QVVARLSYIG+LGHMTK+SPQFEKSRKVSGPRALQPSQWGMLCP
Sbjct: 438  GNWDVKRFRMHRKGMSQVVARLSYIGSLGHMTKISPQFEKSRKVSGPRALQPSQWGMLCP 497

Query: 2239 CDTPEGEACGLVKNLALMTHVTTDEDEAPLVSLCYSLGVEDLELLSGEELHMPNSYLIIL 2060
            CDTPEGEACGLVKNLALMTHVTTDE+E+PL+SLCYSLGVEDLELLSGEELH PNS+LII 
Sbjct: 498  CDTPEGEACGLVKNLALMTHVTTDEEESPLISLCYSLGVEDLELLSGEELHTPNSFLIIF 557

Query: 2059 NGLILGKHRRPQWFANAMRKLRRAAKIGEFVSIFVNEKQRCVYIASDGGRVCRPLVIADK 1880
            NGLILGKHRRPQ FANA+RKLRRA KIGEFVS+FVNEKQ CVYIASDGGRVCRP+VIADK
Sbjct: 558  NGLILGKHRRPQRFANALRKLRRAGKIGEFVSVFVNEKQHCVYIASDGGRVCRPVVIADK 617

Query: 1879 GVPRIKEHHMKELRDGVRTFNSFLKDGLIEYLDVNEENNALIALYEENAKEGTTHIEIEP 1700
            G  RIKEHHMKEL DGVRTF+ FL+DGLIEYLDVNEENNALIALYE +AK  TTHIEIEP
Sbjct: 618  GKSRIKEHHMKELIDGVRTFDDFLRDGLIEYLDVNEENNALIALYEADAKPETTHIEIEP 677

Query: 1699 FTILGVCAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNELTRMDTLIYLLVYPQRPLLT 1520
            FTILGVCAGLIP+PHHNQSPRNTYQCAMGKQAMGNIAYN+L RMD+L+YLLVYPQRPLLT
Sbjct: 678  FTILGVCAGLIPFPHHNQSPRNTYQCAMGKQAMGNIAYNQLCRMDSLLYLLVYPQRPLLT 737

Query: 1519 TRTIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCIVMKKMAAISQK 1340
            TRTIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCIVMKK +A++Q+
Sbjct: 738  TRTIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCIVMKKFSAVNQR 797

Query: 1339 YENGTSDRIIRPQREGYEAERMQILDDDGLAAPGEIIRPHDIYINKESPTITRGPVTSPM 1160
            YEN  SDRI+RP + G++AERMQILDDDGLAAPGEII+P+DIYINKESP IT+GP+ SP+
Sbjct: 798  YENNASDRIVRPLKVGHDAERMQILDDDGLAAPGEIIKPNDIYINKESPIITKGPLISPV 857

Query: 1159 GLPDSAYKPSRQTYKGPEGETAVVDRVSLCSDKNSNLCIKFMIRHTRRPEVGDKFSSRHG 980
            GLPDSAYKPSRQT+KGPEGE +VVDRV+LCSDKNSNLCIKF+IRHTRRPEVGDKFSSRHG
Sbjct: 858  GLPDSAYKPSRQTFKGPEGEASVVDRVALCSDKNSNLCIKFLIRHTRRPEVGDKFSSRHG 917

Query: 979  QKGVCGTIVQQEDLPFSERGICPDLIMNPHGFPSRMTVGKMIELLGSKAGVSSGRFHYGS 800
            QKGVCGTI+QQED PFSERGICPDLIMNPHGFPSRMTVGKMIELLG KAGVS GRFHYGS
Sbjct: 918  QKGVCGTIIQQEDFPFSERGICPDLIMNPHGFPSRMTVGKMIELLGGKAGVSCGRFHYGS 977

Query: 799  AFGEPSGHADRVEAISETLVKHGFSYSGKDFIYSGITGEPLQAYIFMGPIYYQKLKHMVL 620
            AFGEPSGHAD+VE IS+TLVKHGFSYSGKDFIYSGITG PLQAYIFMGPIYYQKLKHMVL
Sbjct: 978  AFGEPSGHADKVETISKTLVKHGFSYSGKDFIYSGITGCPLQAYIFMGPIYYQKLKHMVL 1037

Query: 619  DKMHARGSGPRVMITRQPTEGRSRNGGLRVGEMERDCLIAYGASMLIYERLMISSDPFEV 440
            DKMHARGSGPRVM+TRQPTEGR+RNGGLRVGEMERDCLIAYGASMLI+ERLM+SSDPFEV
Sbjct: 1038 DKMHARGSGPRVMLTRQPTEGRARNGGLRVGEMERDCLIAYGASMLIFERLMVSSDPFEV 1097

Query: 439  QVCRKCGLLGYYNFKLKTANCSTCKNGDNISTMKLPYACKLLFQELQAMNIVPRLKLTEA 260
            QVCR CGLLGYYN KLK   CSTCKNGDNISTMKLPYACKLLFQELQAMN+VPRLKLTEA
Sbjct: 1098 QVCRVCGLLGYYNHKLKIGICSTCKNGDNISTMKLPYACKLLFQELQAMNVVPRLKLTEA 1157


>ref|XP_009758465.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC2 [Nicotiana
            sylvestris] gi|698523320|ref|XP_009758466.1| PREDICTED:
            DNA-directed RNA polymerase III subunit RPC2 [Nicotiana
            sylvestris]
          Length = 1155

 Score = 1972 bits (5108), Expect = 0.0
 Identities = 975/1151 (84%), Positives = 1046/1151 (90%), Gaps = 2/1151 (0%)
 Frame = -2

Query: 3706 EDSALLNDLQEQGLKIDKQSLAAPVKSAVDKFQLLPEFLKVRGLVKQHLDSFNYFLRTQI 3527
            +DS + N   +    IDKQ LA+P+K+ VDK+QL+PEFLKVRGLVKQHLDSFNYF++T+I
Sbjct: 5    DDSTMSNPTNDLSHGIDKQYLASPIKNLVDKYQLVPEFLKVRGLVKQHLDSFNYFVKTEI 64

Query: 3526 KKIVRANDLITSRVDPSIYLRYKDVRIGEPSIIIDGVTEKLTPHKCRLADLTYAAPIYVN 3347
            KKIV+AN  I S +DP+IYL+Y DV IGEPSI++DGVTEKL P KCRL D+TYAAPIYV+
Sbjct: 65   KKIVQANKEIRSILDPNIYLKYNDVHIGEPSIMVDGVTEKLNPQKCRLCDITYAAPIYVD 124

Query: 3346 IEYITGSHGSKTTQMKRDVIIGRMPIMLRSCCCVLYGKDEEELARCGECPLDPGGYFVIK 3167
            IEY TGSHG  + Q K++V IGRMP+MLRSCCCVLYGKDEEELA+ GECPLDPGGYFVIK
Sbjct: 125  IEYTTGSHGQISVQTKKNVTIGRMPVMLRSCCCVLYGKDEEELAKLGECPLDPGGYFVIK 184

Query: 3166 GTEKVILIQEQLSKNRIIIDTDKKNCVQASVTSSTEATKSKTVIKMEKEKIYLYLNQFTS 2987
            GTEKVILIQEQLSKNRIIIDTDKK CVQASVTSSTE TKSKT++KMEKEK+YL LN F +
Sbjct: 185  GTEKVILIQEQLSKNRIIIDTDKKGCVQASVTSSTEKTKSKTIVKMEKEKVYLELNMFKT 244

Query: 2986 KVPIMMVMKAMGMESDQEVVQMIGRDPRYSELLLPSIEDCAKEAVYTQYQALEYLE--QK 2813
            KVPIM+VMKAMGMESDQEVVQMIGRDPR+S LLLPSIE+CA   VYTQ QALE+LE  + 
Sbjct: 245  KVPIMIVMKAMGMESDQEVVQMIGRDPRFSALLLPSIEECADLKVYTQQQALEFLESDKM 304

Query: 2812 VKKLPYSNALIEKEGRALGILRDIFLANIPVQQDNFRPKCIYVAVMLRRMMEAILNKDAM 2633
            +K   YS   +EK  RAL ILRDIFLAN+PV + NFR KCIYVAVM+RRMMEAILNKDAM
Sbjct: 305  LKMFSYSAGPVEKGARALSILRDIFLANVPVHKHNFRKKCIYVAVMMRRMMEAILNKDAM 364

Query: 2632 DDKDYAGNKRXXXXXXXXXXXXXXXFKTMNDEARKTIDTILAKPSRSSRFDISQFIVKDS 2453
            DDKDY GNKR               FKTMNDEARKT+D +LA+PSRSSR DIS +I KDS
Sbjct: 365  DDKDYVGNKRLELSGQLLSLLFEDLFKTMNDEARKTVDALLARPSRSSRLDISPYIAKDS 424

Query: 2452 ITVGLERTLSTGNWDVKRFRMHRKGMTQVVARLSYIGTLGHMTKVSPQFEKSRKVSGPRA 2273
            ITVG+ERTLSTGNWDVKRFRMHRKGMTQVVARLSYIG+LGHMTK+SPQFEKSRKVSGPRA
Sbjct: 425  ITVGMERTLSTGNWDVKRFRMHRKGMTQVVARLSYIGSLGHMTKISPQFEKSRKVSGPRA 484

Query: 2272 LQPSQWGMLCPCDTPEGEACGLVKNLALMTHVTTDEDEAPLVSLCYSLGVEDLELLSGEE 2093
            LQPSQWGMLCPCDTPEGEACGLVKNLALMTHVTTDEDE P++SLCY LGVEDLE LS EE
Sbjct: 485  LQPSQWGMLCPCDTPEGEACGLVKNLALMTHVTTDEDEQPIISLCYCLGVEDLEQLSAEE 544

Query: 2092 LHMPNSYLIILNGLILGKHRRPQWFANAMRKLRRAAKIGEFVSIFVNEKQRCVYIASDGG 1913
            LHMP+SYLIILNGLILGKHR PQ FANAMRKLRRA KIGEF+SIFVNEKQR VYIASDGG
Sbjct: 545  LHMPSSYLIILNGLILGKHRSPQRFANAMRKLRRAGKIGEFISIFVNEKQRSVYIASDGG 604

Query: 1912 RVCRPLVIADKGVPRIKEHHMKELRDGVRTFNSFLKDGLIEYLDVNEENNALIALYEENA 1733
            RVCRPLVIADKGV RIKE HMKELRDGVR F+SFL+DGLIEYLDVNEENN+LIALYE+ A
Sbjct: 605  RVCRPLVIADKGVSRIKEQHMKELRDGVRNFDSFLRDGLIEYLDVNEENNSLIALYEKEA 664

Query: 1732 KEGTTHIEIEPFTILGVCAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNELTRMDTLIY 1553
               TTHIEIEPFTILGVCAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYN+L+RMDTLIY
Sbjct: 665  TPETTHIEIEPFTILGVCAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNQLSRMDTLIY 724

Query: 1552 LLVYPQRPLLTTRTIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCI 1373
            LLVYPQRPLLTTRTIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCI
Sbjct: 725  LLVYPQRPLLTTRTIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCI 784

Query: 1372 VMKKMAAISQKYENGTSDRIIRPQREGYEAERMQILDDDGLAAPGEIIRPHDIYINKESP 1193
            VMKK +A   KYEN TSDRII+PQR+GYEAERMQILD+DGLA+PGEIIRPHDIYINKESP
Sbjct: 785  VMKKYSATCLKYENNTSDRIIKPQRQGYEAERMQILDEDGLASPGEIIRPHDIYINKESP 844

Query: 1192 TITRGPVTSPMGLPDSAYKPSRQTYKGPEGETAVVDRVSLCSDKNSNLCIKFMIRHTRRP 1013
            T+TR PV+SPM LPDSAYKPSRQTYKGPEGET VVDRV+L SDKN+NLCIKFMIRHTRRP
Sbjct: 845  TVTRTPVSSPMSLPDSAYKPSRQTYKGPEGETPVVDRVALHSDKNNNLCIKFMIRHTRRP 904

Query: 1012 EVGDKFSSRHGQKGVCGTIVQQEDLPFSERGICPDLIMNPHGFPSRMTVGKMIELLGSKA 833
            E+GDKFSSRHGQKGVCGTIVQQED PFSERGICPDLIMNPHGFPSRMTVGKMIELLGSKA
Sbjct: 905  EIGDKFSSRHGQKGVCGTIVQQEDFPFSERGICPDLIMNPHGFPSRMTVGKMIELLGSKA 964

Query: 832  GVSSGRFHYGSAFGEPSGHADRVEAISETLVKHGFSYSGKDFIYSGITGEPLQAYIFMGP 653
            GVS GRFHYGSAFGEPSGHAD V+ ISETLVKHGFSY+GKDFIYSGITG PLQAYIFMGP
Sbjct: 965  GVSCGRFHYGSAFGEPSGHADTVDTISETLVKHGFSYNGKDFIYSGITGMPLQAYIFMGP 1024

Query: 652  IYYQKLKHMVLDKMHARGSGPRVMITRQPTEGRSRNGGLRVGEMERDCLIAYGASMLIYE 473
            IYYQKLKHMVLDKMHARGSGPRVMITRQPTEGRSRNGGLRVGEMERDCLIAYGASMLIYE
Sbjct: 1025 IYYQKLKHMVLDKMHARGSGPRVMITRQPTEGRSRNGGLRVGEMERDCLIAYGASMLIYE 1084

Query: 472  RLMISSDPFEVQVCRKCGLLGYYNFKLKTANCSTCKNGDNISTMKLPYACKLLFQELQAM 293
            RLMISSDPFEVQVCRKCGLLGYYN+KLKT  CS CKNG+NISTMKLPYACKLL QELQ+M
Sbjct: 1085 RLMISSDPFEVQVCRKCGLLGYYNYKLKTGICSMCKNGENISTMKLPYACKLLIQELQSM 1144

Query: 292  NIVPRLKLTEA 260
            NIVPRLKL+EA
Sbjct: 1145 NIVPRLKLSEA 1155


>ref|XP_006362214.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC2-like isoform
            X1 [Solanum tuberosum] gi|565393087|ref|XP_006362215.1|
            PREDICTED: DNA-directed RNA polymerase III subunit
            RPC2-like isoform X2 [Solanum tuberosum]
          Length = 1153

 Score = 1966 bits (5092), Expect = 0.0
 Identities = 976/1150 (84%), Positives = 1047/1150 (91%), Gaps = 2/1150 (0%)
 Frame = -2

Query: 3703 DSALLNDLQEQGLKIDKQSLAAPVKSAVDKFQLLPEFLKVRGLVKQHLDSFNYFLRTQIK 3524
            DS + N  ++    IDKQ LA+P+K+ VDK+QL+PEFLKVRGLVKQHLDSFNYF+RT+IK
Sbjct: 4    DSTMSNTTEDSNQGIDKQHLASPIKNLVDKYQLVPEFLKVRGLVKQHLDSFNYFVRTEIK 63

Query: 3523 KIVRANDLITSRVDPSIYLRYKDVRIGEPSIIIDGVTEKLTPHKCRLADLTYAAPIYVNI 3344
            KIVRAN  I S +DP+IYLRY+DV IGEPS++ D VTEKL P KCRL+D TYAAPIYV I
Sbjct: 64   KIVRANQEIRSILDPNIYLRYRDVHIGEPSMVFDAVTEKLCPQKCRLSDRTYAAPIYVTI 123

Query: 3343 EYITGSHGSKTTQMKRDVIIGRMPIMLRSCCCVLYGKDEEELARCGECPLDPGGYFVIKG 3164
            EY TGSHG  +   K++VIIGRMPIMLRS CCVLYGKDE+ELAR GECPLDPGGYFVIKG
Sbjct: 124  EYTTGSHGQTSVSTKKNVIIGRMPIMLRSSCCVLYGKDEDELARLGECPLDPGGYFVIKG 183

Query: 3163 TEKVILIQEQLSKNRIIIDTDKKNCVQASVTSSTEATKSKTVIKMEKEKIYLYLNQFTSK 2984
            TEKVILIQEQLSKNRIIIDTDKK  VQASVTSSTE TKSKT+IKMEKEK+YL LN F +K
Sbjct: 184  TEKVILIQEQLSKNRIIIDTDKKGSVQASVTSSTEKTKSKTIIKMEKEKVYLELNMFKTK 243

Query: 2983 VPIMMVMKAMGMESDQEVVQMIGRDPRYSELLLPSIEDCAKEAVYTQYQALEYLEQ-KVK 2807
            VPIM+VMKAMGMESDQEVVQMIGRDPR+S LLLPSIE+CA   +YTQ+QALE+LE  K+ 
Sbjct: 244  VPIMVVMKAMGMESDQEVVQMIGRDPRFSALLLPSIEECADLKLYTQHQALEFLESDKML 303

Query: 2806 KLP-YSNALIEKEGRALGILRDIFLANIPVQQDNFRPKCIYVAVMLRRMMEAILNKDAMD 2630
            K+P YS   +EK  RAL ILRDIFLAN+PV Q NFR KCIYVAVM+RRMMEAILNKDAMD
Sbjct: 304  KMPSYSTGPVEKGARALSILRDIFLANVPVHQHNFRKKCIYVAVMMRRMMEAILNKDAMD 363

Query: 2629 DKDYAGNKRXXXXXXXXXXXXXXXFKTMNDEARKTIDTILAKPSRSSRFDISQFIVKDSI 2450
            DKDY GNKR               FKTMNDEAR+TIDT+LA+PSRSSR DISQ+IVKDSI
Sbjct: 364  DKDYVGNKRLELSGQLLSLLFEDLFKTMNDEARRTIDTLLARPSRSSRLDISQYIVKDSI 423

Query: 2449 TVGLERTLSTGNWDVKRFRMHRKGMTQVVARLSYIGTLGHMTKVSPQFEKSRKVSGPRAL 2270
            T+GLERTLSTGNWDVKRFRMHRKGMTQVVARLSYIG+LGHMTK+SPQFEKSRKVSGPRAL
Sbjct: 424  TMGLERTLSTGNWDVKRFRMHRKGMTQVVARLSYIGSLGHMTKISPQFEKSRKVSGPRAL 483

Query: 2269 QPSQWGMLCPCDTPEGEACGLVKNLALMTHVTTDEDEAPLVSLCYSLGVEDLELLSGEEL 2090
            QPSQ+GMLCPCDTPEGEACGLVKNLALMTHVTTDEDE P++SLCY LGVEDLE LS EEL
Sbjct: 484  QPSQFGMLCPCDTPEGEACGLVKNLALMTHVTTDEDERPIMSLCYCLGVEDLEQLSPEEL 543

Query: 2089 HMPNSYLIILNGLILGKHRRPQWFANAMRKLRRAAKIGEFVSIFVNEKQRCVYIASDGGR 1910
            HMP SYLI LNGLILGKH+ PQ FANAMR+LRRA KIGEFVSIFVNEKQRCVYIASDGGR
Sbjct: 544  HMPTSYLITLNGLILGKHKSPQRFANAMRRLRRAGKIGEFVSIFVNEKQRCVYIASDGGR 603

Query: 1909 VCRPLVIADKGVPRIKEHHMKELRDGVRTFNSFLKDGLIEYLDVNEENNALIALYEENAK 1730
            VCRPLVIADKGV RIKEHHM+ELRDGVR F+SFLKDGLIEYLDVNEENN LIALYE+ A 
Sbjct: 604  VCRPLVIADKGVSRIKEHHMRELRDGVRDFDSFLKDGLIEYLDVNEENNTLIALYEKEAT 663

Query: 1729 EGTTHIEIEPFTILGVCAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNELTRMDTLIYL 1550
              TTHIEIEPFTILGVCAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYN+L RMD L+YL
Sbjct: 664  PETTHIEIEPFTILGVCAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNQLNRMDGLLYL 723

Query: 1549 LVYPQRPLLTTRTIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCIV 1370
            LVYPQRPLLTTRTIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCIV
Sbjct: 724  LVYPQRPLLTTRTIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCIV 783

Query: 1369 MKKMAAISQKYENGTSDRIIRPQREGYEAERMQILDDDGLAAPGEIIRPHDIYINKESPT 1190
            MKK +AI QKYENGTSDRII+PQR+G+EA++MQILDDDG+AAPGE IR HDIYINKESPT
Sbjct: 784  MKKYSAICQKYENGTSDRIIKPQRQGFEADKMQILDDDGMAAPGETIRNHDIYINKESPT 843

Query: 1189 ITRGPVTSPMGLPDSAYKPSRQTYKGPEGETAVVDRVSLCSDKNSNLCIKFMIRHTRRPE 1010
            +TR P+TSPMGLPDSAYK SRQTYKGPEGETAVVDRV+L SD+N+NL IKFMIRHTRRPE
Sbjct: 844  VTRTPITSPMGLPDSAYKTSRQTYKGPEGETAVVDRVALYSDRNNNLSIKFMIRHTRRPE 903

Query: 1009 VGDKFSSRHGQKGVCGTIVQQEDLPFSERGICPDLIMNPHGFPSRMTVGKMIELLGSKAG 830
            +GDKFSSRHGQKGVCGTIVQQED PFSERGICPDLIMNPHGFPSRMTVGKMIELLGSKAG
Sbjct: 904  IGDKFSSRHGQKGVCGTIVQQEDFPFSERGICPDLIMNPHGFPSRMTVGKMIELLGSKAG 963

Query: 829  VSSGRFHYGSAFGEPSGHADRVEAISETLVKHGFSYSGKDFIYSGITGEPLQAYIFMGPI 650
            VS GRFHYGSAFGEPSGHAD V++ISETLVKHGFSY+GKDFIYSGITG PLQAYIFMGPI
Sbjct: 964  VSCGRFHYGSAFGEPSGHADTVDSISETLVKHGFSYNGKDFIYSGITGMPLQAYIFMGPI 1023

Query: 649  YYQKLKHMVLDKMHARGSGPRVMITRQPTEGRSRNGGLRVGEMERDCLIAYGASMLIYER 470
            YYQKLKHMVLDKMHARGSGPRVM+TRQPTEGRSRNGGLRVGEMERDCLIAYGASMLIYER
Sbjct: 1024 YYQKLKHMVLDKMHARGSGPRVMMTRQPTEGRSRNGGLRVGEMERDCLIAYGASMLIYER 1083

Query: 469  LMISSDPFEVQVCRKCGLLGYYNFKLKTANCSTCKNGDNISTMKLPYACKLLFQELQAMN 290
            LMISSDPFEVQVCRKCGLLGYYN+KLKT  CS CKNG+NISTMKLPYACKLLFQELQ+MN
Sbjct: 1084 LMISSDPFEVQVCRKCGLLGYYNYKLKTGICSMCKNGENISTMKLPYACKLLFQELQSMN 1143

Query: 289  IVPRLKLTEA 260
            IVPRLKL EA
Sbjct: 1144 IVPRLKLAEA 1153


>ref|XP_010312066.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC2 [Solanum
            lycopersicum] gi|723738099|ref|XP_010312067.1| PREDICTED:
            DNA-directed RNA polymerase III subunit RPC2 [Solanum
            lycopersicum]
          Length = 1153

 Score = 1956 bits (5068), Expect = 0.0
 Identities = 973/1150 (84%), Positives = 1044/1150 (90%), Gaps = 2/1150 (0%)
 Frame = -2

Query: 3703 DSALLNDLQEQGLKIDKQSLAAPVKSAVDKFQLLPEFLKVRGLVKQHLDSFNYFLRTQIK 3524
            DS + N  ++    IDKQ LA+ +K+ VDK+QL+PEFLKVRGLVKQHLDSFNYF+RT+IK
Sbjct: 4    DSTMSNTTEDSNQGIDKQHLASHIKNLVDKYQLVPEFLKVRGLVKQHLDSFNYFVRTEIK 63

Query: 3523 KIVRANDLITSRVDPSIYLRYKDVRIGEPSIIIDGVTEKLTPHKCRLADLTYAAPIYVNI 3344
            KIVRAN  I S +DP+IYLRY+DV IGEPS++ D VTEKL P KCRL+D TYAAPIYV I
Sbjct: 64   KIVRANQEIRSTLDPNIYLRYRDVHIGEPSMVFDAVTEKLCPQKCRLSDRTYAAPIYVTI 123

Query: 3343 EYITGSHGSKTTQMKRDVIIGRMPIMLRSCCCVLYGKDEEELARCGECPLDPGGYFVIKG 3164
            +Y TGSHG  +   K++VIIGRMPIMLRS CCVLYGKDE+ELAR GECPLDPGGYFVIKG
Sbjct: 124  DYTTGSHGQTSVSTKKNVIIGRMPIMLRSSCCVLYGKDEDELARLGECPLDPGGYFVIKG 183

Query: 3163 TEKVILIQEQLSKNRIIIDTDKKNCVQASVTSSTEATKSKTVIKMEKEKIYLYLNQFTSK 2984
            TEKVILIQEQLSKNRIIIDTDKK  VQASVTSSTE TKSKT+IKMEKEK+YL LN F +K
Sbjct: 184  TEKVILIQEQLSKNRIIIDTDKKGSVQASVTSSTEKTKSKTIIKMEKEKVYLELNMFKTK 243

Query: 2983 VPIMMVMKAMGMESDQEVVQMIGRDPRYSELLLPSIEDCAKEAVYTQYQALEYLEQ-KVK 2807
            VPIM+VMKAMGMESDQEVVQMIGRDPR+S LLLPSIE+CA   +YTQ QALE+LE  K+ 
Sbjct: 244  VPIMVVMKAMGMESDQEVVQMIGRDPRFSALLLPSIEECADLKLYTQQQALEFLESDKML 303

Query: 2806 KLP-YSNALIEKEGRALGILRDIFLANIPVQQDNFRPKCIYVAVMLRRMMEAILNKDAMD 2630
            K+P YS   IEK  RAL ILRDIFLAN+PV Q NFR KCIYVAVM+RRMMEAILNKDAMD
Sbjct: 304  KMPSYSTGPIEKGARALSILRDIFLANVPVHQHNFRKKCIYVAVMMRRMMEAILNKDAMD 363

Query: 2629 DKDYAGNKRXXXXXXXXXXXXXXXFKTMNDEARKTIDTILAKPSRSSRFDISQFIVKDSI 2450
            DKDY GNKR               FKTMNDEAR+TIDT+LA+PSRSSR DISQ+I+KDSI
Sbjct: 364  DKDYVGNKRLELSGQLLSLLFEDLFKTMNDEARRTIDTLLARPSRSSRLDISQYIIKDSI 423

Query: 2449 TVGLERTLSTGNWDVKRFRMHRKGMTQVVARLSYIGTLGHMTKVSPQFEKSRKVSGPRAL 2270
            T+GLERTLSTGNWDVKRFRMHRKGMTQVVARLSYIG+LGHMTK+SPQFEKSRKVSGPRAL
Sbjct: 424  TMGLERTLSTGNWDVKRFRMHRKGMTQVVARLSYIGSLGHMTKISPQFEKSRKVSGPRAL 483

Query: 2269 QPSQWGMLCPCDTPEGEACGLVKNLALMTHVTTDEDEAPLVSLCYSLGVEDLELLSGEEL 2090
            QPSQ+GMLCPCDTPEGEACGLVKNLALMTHVTTDEDE P++SLCY LGVEDLE LS EEL
Sbjct: 484  QPSQFGMLCPCDTPEGEACGLVKNLALMTHVTTDEDERPIMSLCYCLGVEDLEQLSPEEL 543

Query: 2089 HMPNSYLIILNGLILGKHRRPQWFANAMRKLRRAAKIGEFVSIFVNEKQRCVYIASDGGR 1910
            HMP SYLI LNGLILGKH+ PQ FANAMR+LRRA K+GEFVSIFVNEKQRCVYIASDGGR
Sbjct: 544  HMPTSYLITLNGLILGKHKSPQRFANAMRRLRRAGKVGEFVSIFVNEKQRCVYIASDGGR 603

Query: 1909 VCRPLVIADKGVPRIKEHHMKELRDGVRTFNSFLKDGLIEYLDVNEENNALIALYEENAK 1730
            VCRPLVIADKGV RIKEHHM+ELRDG+R F+SFLKDGLIEYLDVNEENN LIALYE+ A 
Sbjct: 604  VCRPLVIADKGVSRIKEHHMRELRDGLRDFDSFLKDGLIEYLDVNEENNTLIALYEKEAT 663

Query: 1729 EGTTHIEIEPFTILGVCAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNELTRMDTLIYL 1550
              TTHIEIEPFTILGVCAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYN+L RMD L+YL
Sbjct: 664  PETTHIEIEPFTILGVCAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNQLNRMDGLLYL 723

Query: 1549 LVYPQRPLLTTRTIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCIV 1370
            LVYPQRPLLTTRTIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCIV
Sbjct: 724  LVYPQRPLLTTRTIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCIV 783

Query: 1369 MKKMAAISQKYENGTSDRIIRPQREGYEAERMQILDDDGLAAPGEIIRPHDIYINKESPT 1190
            MKK +AI QKYENGTSDRII+PQR+G EA+RMQILDDDG+AAPGE IR HDIYINKESPT
Sbjct: 784  MKKYSAICQKYENGTSDRIIKPQRQGPEADRMQILDDDGMAAPGETIRNHDIYINKESPT 843

Query: 1189 ITRGPVTSPMGLPDSAYKPSRQTYKGPEGETAVVDRVSLCSDKNSNLCIKFMIRHTRRPE 1010
            +TR PVTSPMGLPDSAYK S+QTYKGPEGETAVVDRV+L SD+N+NL IKFMIRHTRRPE
Sbjct: 844  VTRTPVTSPMGLPDSAYKSSKQTYKGPEGETAVVDRVALYSDRNNNLSIKFMIRHTRRPE 903

Query: 1009 VGDKFSSRHGQKGVCGTIVQQEDLPFSERGICPDLIMNPHGFPSRMTVGKMIELLGSKAG 830
            +GDKFSSRHGQKGVCGTIVQQED PFSERGICPDLIMNPHGFPSRMTVGKMIELLGSKAG
Sbjct: 904  LGDKFSSRHGQKGVCGTIVQQEDFPFSERGICPDLIMNPHGFPSRMTVGKMIELLGSKAG 963

Query: 829  VSSGRFHYGSAFGEPSGHADRVEAISETLVKHGFSYSGKDFIYSGITGEPLQAYIFMGPI 650
            VS GRFHYGSAFGEPSGHAD V+AISETLVKHGFSY+GKDFIYSGITG PLQAYIFMGPI
Sbjct: 964  VSCGRFHYGSAFGEPSGHADTVDAISETLVKHGFSYNGKDFIYSGITGMPLQAYIFMGPI 1023

Query: 649  YYQKLKHMVLDKMHARGSGPRVMITRQPTEGRSRNGGLRVGEMERDCLIAYGASMLIYER 470
            YYQKLKHMV+DKMHARGSGPRVM+TRQPTEGRSRNGGLRVGEMERDCLIAYGASMLIYER
Sbjct: 1024 YYQKLKHMVVDKMHARGSGPRVMMTRQPTEGRSRNGGLRVGEMERDCLIAYGASMLIYER 1083

Query: 469  LMISSDPFEVQVCRKCGLLGYYNFKLKTANCSTCKNGDNISTMKLPYACKLLFQELQAMN 290
            LMISSDPFEVQVCRKCGLLGYYN+KLKT  CS CKNG+NISTMKLPYACKLLFQELQ+MN
Sbjct: 1084 LMISSDPFEVQVCRKCGLLGYYNYKLKTGICSMCKNGENISTMKLPYACKLLFQELQSMN 1143

Query: 289  IVPRLKLTEA 260
            IVPRLKL EA
Sbjct: 1144 IVPRLKLAEA 1153


>ref|XP_012849950.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC2 [Erythranthe
            guttatus]
          Length = 1153

 Score = 1952 bits (5056), Expect = 0.0
 Identities = 960/1150 (83%), Positives = 1042/1150 (90%)
 Frame = -2

Query: 3709 EEDSALLNDLQEQGLKIDKQSLAAPVKSAVDKFQLLPEFLKVRGLVKQHLDSFNYFLRTQ 3530
            ++D  L  DLQE+G++IDKQ LAAPVK++VDKFQLLPEFLKVRGLVKQHLDS+NYF+RT 
Sbjct: 4    DDDLGLCTDLQEKGMEIDKQFLAAPVKTSVDKFQLLPEFLKVRGLVKQHLDSYNYFVRTH 63

Query: 3529 IKKIVRANDLITSRVDPSIYLRYKDVRIGEPSIIIDGVTEKLTPHKCRLADLTYAAPIYV 3350
            IKKIV+ANDLIT+  DPSIYLRYKDVRIGEPS+++DGVTEKLTP KCRL D TY APIYV
Sbjct: 64   IKKIVQANDLITATKDPSIYLRYKDVRIGEPSMVLDGVTEKLTPQKCRLLDTTYTAPIYV 123

Query: 3349 NIEYITGSHGSKTTQMKRDVIIGRMPIMLRSCCCVLYGKDEEELARCGECPLDPGGYFVI 3170
            NIEY+TGSHGSKTTQMKRDVIIGRMP+MLRSCCC+L+GKDEEELA+ GECPLDPGGYFV+
Sbjct: 124  NIEYVTGSHGSKTTQMKRDVIIGRMPVMLRSCCCILHGKDEEELAKYGECPLDPGGYFVV 183

Query: 3169 KGTEKVILIQEQLSKNRIIIDTDKKNCVQASVTSSTEATKSKTVIKMEKEKIYLYLNQFT 2990
            KG EKV+LIQEQLSKNRIIIDTD K CVQASV S T  TKSKT+I+MEKEKIYL LN+F 
Sbjct: 184  KGNEKVLLIQEQLSKNRIIIDTDNKGCVQASVASITAKTKSKTIIRMEKEKIYLLLNKFG 243

Query: 2989 SKVPIMMVMKAMGMESDQEVVQMIGRDPRYSELLLPSIEDCAKEAVYTQYQALEYLEQKV 2810
            +KVPIM+V+KAMGMESDQEVVQMIGRDPRYSELLLPSIEDC KE+V+TQ+QAL +L+ KV
Sbjct: 244  TKVPIMIVLKAMGMESDQEVVQMIGRDPRYSELLLPSIEDCVKESVHTQHQALAFLDHKV 303

Query: 2809 KKLPYSNALIEKEGRALGILRDIFLANIPVQQDNFRPKCIYVAVMLRRMMEAILNKDAMD 2630
                Y +   EKEGRAL ILRDIFLANIPV QDNFR KCIYVAVM+RRMMEAILNKDAMD
Sbjct: 304  NNRSYYSTTYEKEGRALSILRDIFLANIPVDQDNFRSKCIYVAVMVRRMMEAILNKDAMD 363

Query: 2629 DKDYAGNKRXXXXXXXXXXXXXXXFKTMNDEARKTIDTILAKPSRSSRFDISQFIVKDSI 2450
            DKDY GNKR               FK+MN+EA K+ID ILAKPSRSSR DISQ+IVKDSI
Sbjct: 364  DKDYVGNKRLELSGQMLSLLFEDLFKSMNEEAVKSIDKILAKPSRSSRLDISQYIVKDSI 423

Query: 2449 TVGLERTLSTGNWDVKRFRMHRKGMTQVVARLSYIGTLGHMTKVSPQFEKSRKVSGPRAL 2270
            T GLERTLSTGN+D+KRF ++RKGM Q VARLSYI T+GHMTK+ PQFEKSRKVSGPRAL
Sbjct: 424  TFGLERTLSTGNFDLKRFGVNRKGMAQAVARLSYIATVGHMTKIIPQFEKSRKVSGPRAL 483

Query: 2269 QPSQWGMLCPCDTPEGEACGLVKNLALMTHVTTDEDEAPLVSLCYSLGVEDLELLSGEEL 2090
            QPSQWGMLCPCDTPEGEACGLVKNLALMTHVTTDEDE PL+SLCY+LGVE  E LSGEE+
Sbjct: 484  QPSQWGMLCPCDTPEGEACGLVKNLALMTHVTTDEDEGPLISLCYTLGVESFEYLSGEEV 543

Query: 2089 HMPNSYLIILNGLILGKHRRPQWFANAMRKLRRAAKIGEFVSIFVNEKQRCVYIASDGGR 1910
            HMPNSYLII NGLI+GKHRRPQ F+NAMR LRRA KIGEF+SIFVNEKQRCVYIASDGGR
Sbjct: 544  HMPNSYLIIFNGLIIGKHRRPQRFSNAMRTLRRAGKIGEFISIFVNEKQRCVYIASDGGR 603

Query: 1909 VCRPLVIADKGVPRIKEHHMKELRDGVRTFNSFLKDGLIEYLDVNEENNALIALYEENAK 1730
            VCRPLVIADKGV RIKEHHMKEL+DGVRTF+SFLKDGLIEYLDVNEENNALIALYE+NAK
Sbjct: 604  VCRPLVIADKGVSRIKEHHMKELKDGVRTFDSFLKDGLIEYLDVNEENNALIALYEDNAK 663

Query: 1729 EGTTHIEIEPFTILGVCAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNELTRMDTLIYL 1550
            E TTHIEIEPFTILGVCAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYN+  R DTL+ L
Sbjct: 664  EKTTHIEIEPFTILGVCAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNQYCRTDTLMCL 723

Query: 1549 LVYPQRPLLTTRTIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCIV 1370
            LVYPQRPLLTTRTIELV +DKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCIV
Sbjct: 724  LVYPQRPLLTTRTIELVSFDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCIV 783

Query: 1369 MKKMAAISQKYENGTSDRIIRPQREGYEAERMQILDDDGLAAPGEIIRPHDIYINKESPT 1190
            MK+M ++  KYEN TSDRII+PQREG + E+MQILDDDGLAAPG+ IR  DIYINK+SP 
Sbjct: 784  MKRMVSVCLKYENSTSDRIIKPQREGQDCEKMQILDDDGLAAPGQTIRADDIYINKQSPI 843

Query: 1189 ITRGPVTSPMGLPDSAYKPSRQTYKGPEGETAVVDRVSLCSDKNSNLCIKFMIRHTRRPE 1010
            +TR PV SPM LPDS+Y+ SR+ YKG  GE+AV+DRV+L SD+++N+ IKFM R TRRPE
Sbjct: 844  VTRVPVKSPMALPDSSYRSSREHYKGSVGESAVIDRVALFSDRDNNMKIKFMTRQTRRPE 903

Query: 1009 VGDKFSSRHGQKGVCGTIVQQEDLPFSERGICPDLIMNPHGFPSRMTVGKMIELLGSKAG 830
            VGDKFSSRHGQKGVCGTIVQQED PFSERGICPDLIMNPHGFPSRMTVGKMIELLGSKAG
Sbjct: 904  VGDKFSSRHGQKGVCGTIVQQEDFPFSERGICPDLIMNPHGFPSRMTVGKMIELLGSKAG 963

Query: 829  VSSGRFHYGSAFGEPSGHADRVEAISETLVKHGFSYSGKDFIYSGITGEPLQAYIFMGPI 650
            VS GRFHYGSAFGEPSGHAD+VE ISETLVKHGFSY+GKDF+YSGITGEPLQAYIFMGPI
Sbjct: 964  VSCGRFHYGSAFGEPSGHADKVETISETLVKHGFSYNGKDFLYSGITGEPLQAYIFMGPI 1023

Query: 649  YYQKLKHMVLDKMHARGSGPRVMITRQPTEGRSRNGGLRVGEMERDCLIAYGASMLIYER 470
            YYQKLKHMVLDKMHARG GP+VM+TRQPTEGRS NGGLRVGEMERDCLIAYG SML+YER
Sbjct: 1024 YYQKLKHMVLDKMHARGHGPKVMMTRQPTEGRSNNGGLRVGEMERDCLIAYGTSMLLYER 1083

Query: 469  LMISSDPFEVQVCRKCGLLGYYNFKLKTANCSTCKNGDNISTMKLPYACKLLFQELQAMN 290
            LMISSD F VQVCRKCGLLGYYNFKLKT  CSTCKNGDNISTMKLPYACKLL QELQ+MN
Sbjct: 1084 LMISSDEFVVQVCRKCGLLGYYNFKLKTGICSTCKNGDNISTMKLPYACKLLIQELQSMN 1143

Query: 289  IVPRLKLTEA 260
            IVPRLKLTEA
Sbjct: 1144 IVPRLKLTEA 1153


>ref|XP_007010799.1| DNA-directed RNA polymerase isoform 1 [Theobroma cacao]
            gi|508727712|gb|EOY19609.1| DNA-directed RNA polymerase
            isoform 1 [Theobroma cacao]
          Length = 1158

 Score = 1926 bits (4990), Expect = 0.0
 Identities = 952/1158 (82%), Positives = 1037/1158 (89%), Gaps = 4/1158 (0%)
 Frame = -2

Query: 3721 MGVKEEDSALLNDLQEQGLK---IDKQSLAAPVKSAVDKFQLLPEFLKVRGLVKQHLDSF 3551
            MG+K+ED  L N+     +    +DKQ LAAP+KSAVDKFQLLPEFLKVRGLVKQHLDSF
Sbjct: 1    MGLKQEDLLLNNNTNNSNVSEMPVDKQKLAAPIKSAVDKFQLLPEFLKVRGLVKQHLDSF 60

Query: 3550 NYFLRTQIKKIVRANDLITSRVDPSIYLRYKDVRIGEPSIIIDGVTEKLTPHKCRLADLT 3371
            NYF+ T IKKIVRAND I S VDPSIYLR+KDVRIGEPS+ I+ V+EK+ PH CRL+D+T
Sbjct: 61   NYFVNTGIKKIVRANDRIVSGVDPSIYLRFKDVRIGEPSMTINAVSEKINPHTCRLSDMT 120

Query: 3370 YAAPIYVNIEYITGSHGSKTTQMKRDVIIGRMPIMLRSCCCVLYGKDEEELARCGECPLD 3191
            YAAPI+VNIEYI GSHG KT   K D++IGRMPIMLRSCCCVLYGKDE ELAR GECPLD
Sbjct: 121  YAAPIFVNIEYIQGSHGQKTRLEKNDLVIGRMPIMLRSCCCVLYGKDEAELARLGECPLD 180

Query: 3190 PGGYFVIKGTEKVILIQEQLSKNRIIIDTDKKNCVQASVTSSTEATKSKTVIKMEKEKIY 3011
            PGGYFVIKG EKVILIQEQLSKNRIIID DKK  + ASVTSS+EATKSKTVI+MEKEKIY
Sbjct: 181  PGGYFVIKGAEKVILIQEQLSKNRIIIDADKKGNINASVTSSSEATKSKTVIQMEKEKIY 240

Query: 3010 LYLNQFTSKVPIMMVMKAMGMESDQEVVQMIGRDPRYSELLLPSIEDCAKEAVYTQYQAL 2831
            L LNQF  K+PIM+VMKAMGMESDQEVVQM+GRDP Y+ +LLPSIE+CA   +YTQ QAL
Sbjct: 241  LLLNQFVKKIPIMVVMKAMGMESDQEVVQMVGRDPHYNAVLLPSIEECAGVGIYTQEQAL 300

Query: 2830 EYLEQKVKKLPYSNALIEKEGRALGILRDIFLANIPVQQDNFRPKCIYVAVMLRRMMEAI 2651
            EYLE KVK++ Y+    EKEGRAL ILRD+FLAN+PV+ +NFRPKC+YVAVMLRRM+EAI
Sbjct: 301  EYLETKVKRVMYTGPASEKEGRALSILRDVFLANVPVRSNNFRPKCLYVAVMLRRMVEAI 360

Query: 2650 LNKDAMDDKDYAGNKRXXXXXXXXXXXXXXXFKTMNDEARKTIDTILAKPSRSSRFDISQ 2471
            LNKDAMDDKDY GNKR               FKT   E +K ID +L+KPSRSS  D SQ
Sbjct: 361  LNKDAMDDKDYVGNKRLELSGQLISLLFEDLFKTTISEVQKMIDLVLSKPSRSSALDPSQ 420

Query: 2470 FI-VKDSITVGLERTLSTGNWDVKRFRMHRKGMTQVVARLSYIGTLGHMTKVSPQFEKSR 2294
            F+  +++IT GLERTLSTGN+D+KRF+MHRKGMTQV+ARLS+IGTLG+MTKVSPQFEKSR
Sbjct: 421  FLRSRETITFGLERTLSTGNFDIKRFKMHRKGMTQVLARLSFIGTLGYMTKVSPQFEKSR 480

Query: 2293 KVSGPRALQPSQWGMLCPCDTPEGEACGLVKNLALMTHVTTDEDEAPLVSLCYSLGVEDL 2114
            KVSGPRALQPSQWGMLCPCDTPEGEACGLVKNLALMTHVTTDEDE PL+SLCY LGVEDL
Sbjct: 481  KVSGPRALQPSQWGMLCPCDTPEGEACGLVKNLALMTHVTTDEDEGPLISLCYCLGVEDL 540

Query: 2113 ELLSGEELHMPNSYLIILNGLILGKHRRPQWFANAMRKLRRAAKIGEFVSIFVNEKQRCV 1934
            ELLSGEELH PNS+L+ILNGLILGKHRRPQ FA AMRKLRRA K+GEFVS+FVNEKQRCV
Sbjct: 541  ELLSGEELHTPNSFLVILNGLILGKHRRPQHFAVAMRKLRRAGKVGEFVSVFVNEKQRCV 600

Query: 1933 YIASDGGRVCRPLVIADKGVPRIKEHHMKELRDGVRTFNSFLKDGLIEYLDVNEENNALI 1754
            YIASDGGRVCRPLVIADKGV RIKEHHMKEL DGVRTF+ FL+DGLIEYLDVNEENNALI
Sbjct: 601  YIASDGGRVCRPLVIADKGVSRIKEHHMKELLDGVRTFDDFLRDGLIEYLDVNEENNALI 660

Query: 1753 ALYEENAKEGTTHIEIEPFTILGVCAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNELT 1574
            ALYE  A   TTHIEIEPFTILGVCAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYN+L 
Sbjct: 661  ALYEGEATPETTHIEIEPFTILGVCAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNQLC 720

Query: 1573 RMDTLIYLLVYPQRPLLTTRTIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLD 1394
            RMDTL+YLLVYPQRPLLTTRTIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLD
Sbjct: 721  RMDTLLYLLVYPQRPLLTTRTIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLD 780

Query: 1393 RGFGRCIVMKKMAAISQKYENGTSDRIIRPQREGYEAERMQILDDDGLAAPGEIIRPHDI 1214
            RGFGRCIVMK+ +A++QKYE G SDRI+RPQR G  +ERMQILDDDG+A PGEIIRP+DI
Sbjct: 781  RGFGRCIVMKRYSAVNQKYETGASDRILRPQRTGPGSERMQILDDDGIATPGEIIRPNDI 840

Query: 1213 YINKESPTITRGPVTSPMGLPDSAYKPSRQTYKGPEGETAVVDRVSLCSDKNSNLCIKFM 1034
            YINKES   TRG   S   LPDSAY+P+RQTYKGPEGE+ VVDRV+LC+D+NSNL IKF+
Sbjct: 841  YINKESSIHTRGSRVSSESLPDSAYRPARQTYKGPEGESCVVDRVALCTDRNSNLSIKFL 900

Query: 1033 IRHTRRPEVGDKFSSRHGQKGVCGTIVQQEDLPFSERGICPDLIMNPHGFPSRMTVGKMI 854
            IRHTRRPEVGDKFSSRHGQKGVCGTI+QQED PFSERGICPDLIMNPHGFPSRMTVGKMI
Sbjct: 901  IRHTRRPEVGDKFSSRHGQKGVCGTIIQQEDFPFSERGICPDLIMNPHGFPSRMTVGKMI 960

Query: 853  ELLGSKAGVSSGRFHYGSAFGEPSGHADRVEAISETLVKHGFSYSGKDFIYSGITGEPLQ 674
            ELLG KAGVS GRFHYGSAFGEPSGHADRVEAISETL+KHGFSY+GKDFIYSGITG PLQ
Sbjct: 961  ELLGGKAGVSCGRFHYGSAFGEPSGHADRVEAISETLIKHGFSYNGKDFIYSGITGCPLQ 1020

Query: 673  AYIFMGPIYYQKLKHMVLDKMHARGSGPRVMITRQPTEGRSRNGGLRVGEMERDCLIAYG 494
            AYIFMGPIYYQKLKHMVLDKMHARG+GPRVM+TRQPTEGR+RNGGLRVGEMERDCLIAYG
Sbjct: 1021 AYIFMGPIYYQKLKHMVLDKMHARGNGPRVMLTRQPTEGRARNGGLRVGEMERDCLIAYG 1080

Query: 493  ASMLIYERLMISSDPFEVQVCRKCGLLGYYNFKLKTANCSTCKNGDNISTMKLPYACKLL 314
            ASMLI+ERLMISSDPFEVQVCRKCGLLGYY+ KLKT  CS+CKNGDN+STMKLPYACKLL
Sbjct: 1081 ASMLIFERLMISSDPFEVQVCRKCGLLGYYSHKLKTGICSSCKNGDNVSTMKLPYACKLL 1140

Query: 313  FQELQAMNIVPRLKLTEA 260
             QELQ+MNIVPRLKL+EA
Sbjct: 1141 IQELQSMNIVPRLKLSEA 1158


>ref|XP_007010801.1| DNA-directed RNA polymerase isoform 3 [Theobroma cacao]
            gi|508727714|gb|EOY19611.1| DNA-directed RNA polymerase
            isoform 3 [Theobroma cacao]
          Length = 1153

 Score = 1912 bits (4953), Expect = 0.0
 Identities = 947/1158 (81%), Positives = 1032/1158 (89%), Gaps = 4/1158 (0%)
 Frame = -2

Query: 3721 MGVKEEDSALLNDLQEQGLK---IDKQSLAAPVKSAVDKFQLLPEFLKVRGLVKQHLDSF 3551
            MG+K+ED  L N+     +    +DKQ LAAP+KSAVDKFQLLPEFLKVRGLVKQHLDSF
Sbjct: 1    MGLKQEDLLLNNNTNNSNVSEMPVDKQKLAAPIKSAVDKFQLLPEFLKVRGLVKQHLDSF 60

Query: 3550 NYFLRTQIKKIVRANDLITSRVDPSIYLRYKDVRIGEPSIIIDGVTEKLTPHKCRLADLT 3371
            NYF+ T IKKIVRAND I S VDPSIYLR+KDVRIGEPS+ I+ V+EK+ PH CRL+D+T
Sbjct: 61   NYFVNTGIKKIVRANDRIVSGVDPSIYLRFKDVRIGEPSMTINAVSEKINPHTCRLSDMT 120

Query: 3370 YAAPIYVNIEYITGSHGSKTTQMKRDVIIGRMPIMLRSCCCVLYGKDEEELARCGECPLD 3191
            YAAPI+VNIEYI GSHG KT   K D++IGRMPIMLRSCCCVLYGKDE ELAR GECPLD
Sbjct: 121  YAAPIFVNIEYIQGSHGQKTRLEKNDLVIGRMPIMLRSCCCVLYGKDEAELARLGECPLD 180

Query: 3190 PGGYFVIKGTEKVILIQEQLSKNRIIIDTDKKNCVQASVTSSTEATKSKTVIKMEKEKIY 3011
            PGGYFVIKG EK     EQLSKNRIIID DKK  + ASVTSS+EATKSKTVI+MEKEKIY
Sbjct: 181  PGGYFVIKGAEK-----EQLSKNRIIIDADKKGNINASVTSSSEATKSKTVIQMEKEKIY 235

Query: 3010 LYLNQFTSKVPIMMVMKAMGMESDQEVVQMIGRDPRYSELLLPSIEDCAKEAVYTQYQAL 2831
            L LNQF  K+PIM+VMKAMGMESDQEVVQM+GRDP Y+ +LLPSIE+CA   +YTQ QAL
Sbjct: 236  LLLNQFVKKIPIMVVMKAMGMESDQEVVQMVGRDPHYNAVLLPSIEECAGVGIYTQEQAL 295

Query: 2830 EYLEQKVKKLPYSNALIEKEGRALGILRDIFLANIPVQQDNFRPKCIYVAVMLRRMMEAI 2651
            EYLE KVK++ Y+    EKEGRAL ILRD+FLAN+PV+ +NFRPKC+YVAVMLRRM+EAI
Sbjct: 296  EYLETKVKRVMYTGPASEKEGRALSILRDVFLANVPVRSNNFRPKCLYVAVMLRRMVEAI 355

Query: 2650 LNKDAMDDKDYAGNKRXXXXXXXXXXXXXXXFKTMNDEARKTIDTILAKPSRSSRFDISQ 2471
            LNKDAMDDKDY GNKR               FKT   E +K ID +L+KPSRSS  D SQ
Sbjct: 356  LNKDAMDDKDYVGNKRLELSGQLISLLFEDLFKTTISEVQKMIDLVLSKPSRSSALDPSQ 415

Query: 2470 FI-VKDSITVGLERTLSTGNWDVKRFRMHRKGMTQVVARLSYIGTLGHMTKVSPQFEKSR 2294
            F+  +++IT GLERTLSTGN+D+KRF+MHRKGMTQV+ARLS+IGTLG+MTKVSPQFEKSR
Sbjct: 416  FLRSRETITFGLERTLSTGNFDIKRFKMHRKGMTQVLARLSFIGTLGYMTKVSPQFEKSR 475

Query: 2293 KVSGPRALQPSQWGMLCPCDTPEGEACGLVKNLALMTHVTTDEDEAPLVSLCYSLGVEDL 2114
            KVSGPRALQPSQWGMLCPCDTPEGEACGLVKNLALMTHVTTDEDE PL+SLCY LGVEDL
Sbjct: 476  KVSGPRALQPSQWGMLCPCDTPEGEACGLVKNLALMTHVTTDEDEGPLISLCYCLGVEDL 535

Query: 2113 ELLSGEELHMPNSYLIILNGLILGKHRRPQWFANAMRKLRRAAKIGEFVSIFVNEKQRCV 1934
            ELLSGEELH PNS+L+ILNGLILGKHRRPQ FA AMRKLRRA K+GEFVS+FVNEKQRCV
Sbjct: 536  ELLSGEELHTPNSFLVILNGLILGKHRRPQHFAVAMRKLRRAGKVGEFVSVFVNEKQRCV 595

Query: 1933 YIASDGGRVCRPLVIADKGVPRIKEHHMKELRDGVRTFNSFLKDGLIEYLDVNEENNALI 1754
            YIASDGGRVCRPLVIADKGV RIKEHHMKEL DGVRTF+ FL+DGLIEYLDVNEENNALI
Sbjct: 596  YIASDGGRVCRPLVIADKGVSRIKEHHMKELLDGVRTFDDFLRDGLIEYLDVNEENNALI 655

Query: 1753 ALYEENAKEGTTHIEIEPFTILGVCAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNELT 1574
            ALYE  A   TTHIEIEPFTILGVCAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYN+L 
Sbjct: 656  ALYEGEATPETTHIEIEPFTILGVCAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNQLC 715

Query: 1573 RMDTLIYLLVYPQRPLLTTRTIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLD 1394
            RMDTL+YLLVYPQRPLLTTRTIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLD
Sbjct: 716  RMDTLLYLLVYPQRPLLTTRTIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLD 775

Query: 1393 RGFGRCIVMKKMAAISQKYENGTSDRIIRPQREGYEAERMQILDDDGLAAPGEIIRPHDI 1214
            RGFGRCIVMK+ +A++QKYE G SDRI+RPQR G  +ERMQILDDDG+A PGEIIRP+DI
Sbjct: 776  RGFGRCIVMKRYSAVNQKYETGASDRILRPQRTGPGSERMQILDDDGIATPGEIIRPNDI 835

Query: 1213 YINKESPTITRGPVTSPMGLPDSAYKPSRQTYKGPEGETAVVDRVSLCSDKNSNLCIKFM 1034
            YINKES   TRG   S   LPDSAY+P+RQTYKGPEGE+ VVDRV+LC+D+NSNL IKF+
Sbjct: 836  YINKESSIHTRGSRVSSESLPDSAYRPARQTYKGPEGESCVVDRVALCTDRNSNLSIKFL 895

Query: 1033 IRHTRRPEVGDKFSSRHGQKGVCGTIVQQEDLPFSERGICPDLIMNPHGFPSRMTVGKMI 854
            IRHTRRPEVGDKFSSRHGQKGVCGTI+QQED PFSERGICPDLIMNPHGFPSRMTVGKMI
Sbjct: 896  IRHTRRPEVGDKFSSRHGQKGVCGTIIQQEDFPFSERGICPDLIMNPHGFPSRMTVGKMI 955

Query: 853  ELLGSKAGVSSGRFHYGSAFGEPSGHADRVEAISETLVKHGFSYSGKDFIYSGITGEPLQ 674
            ELLG KAGVS GRFHYGSAFGEPSGHADRVEAISETL+KHGFSY+GKDFIYSGITG PLQ
Sbjct: 956  ELLGGKAGVSCGRFHYGSAFGEPSGHADRVEAISETLIKHGFSYNGKDFIYSGITGCPLQ 1015

Query: 673  AYIFMGPIYYQKLKHMVLDKMHARGSGPRVMITRQPTEGRSRNGGLRVGEMERDCLIAYG 494
            AYIFMGPIYYQKLKHMVLDKMHARG+GPRVM+TRQPTEGR+RNGGLRVGEMERDCLIAYG
Sbjct: 1016 AYIFMGPIYYQKLKHMVLDKMHARGNGPRVMLTRQPTEGRARNGGLRVGEMERDCLIAYG 1075

Query: 493  ASMLIYERLMISSDPFEVQVCRKCGLLGYYNFKLKTANCSTCKNGDNISTMKLPYACKLL 314
            ASMLI+ERLMISSDPFEVQVCRKCGLLGYY+ KLKT  CS+CKNGDN+STMKLPYACKLL
Sbjct: 1076 ASMLIFERLMISSDPFEVQVCRKCGLLGYYSHKLKTGICSSCKNGDNVSTMKLPYACKLL 1135

Query: 313  FQELQAMNIVPRLKLTEA 260
             QELQ+MNIVPRLKL+EA
Sbjct: 1136 IQELQSMNIVPRLKLSEA 1153


>ref|XP_006494572.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC2-like isoform
            X1 [Citrus sinensis] gi|568883651|ref|XP_006494573.1|
            PREDICTED: DNA-directed RNA polymerase III subunit
            RPC2-like isoform X2 [Citrus sinensis]
          Length = 1149

 Score = 1902 bits (4927), Expect = 0.0
 Identities = 933/1133 (82%), Positives = 1019/1133 (89%)
 Frame = -2

Query: 3658 DKQSLAAPVKSAVDKFQLLPEFLKVRGLVKQHLDSFNYFLRTQIKKIVRANDLITSRVDP 3479
            DKQ LAAPVKS VDKFQLLPEFLKVRGLVKQHLDSFNYF+ T I+KIVRAND I S +DP
Sbjct: 17   DKQKLAAPVKSVVDKFQLLPEFLKVRGLVKQHLDSFNYFVNTGIRKIVRANDRIVSGIDP 76

Query: 3478 SIYLRYKDVRIGEPSIIIDGVTEKLTPHKCRLADLTYAAPIYVNIEYITGSHGSKTTQMK 3299
            SI+LR+KDVRIG+PS+ +DGV+EKL PH CRL+D+TYAAPI VNIEY+ GSH  KTT  K
Sbjct: 77   SIFLRFKDVRIGQPSMTVDGVSEKLNPHMCRLSDMTYAAPILVNIEYVQGSHTEKTTMEK 136

Query: 3298 RDVIIGRMPIMLRSCCCVLYGKDEEELARCGECPLDPGGYFVIKGTEKVILIQEQLSKNR 3119
             DV+IGR+PIMLRSC CVLYGKDE ELAR GECPLDPGGYF+IKGTEKV+LIQEQLSKNR
Sbjct: 137  NDVVIGRIPIMLRSCRCVLYGKDEAELARLGECPLDPGGYFIIKGTEKVLLIQEQLSKNR 196

Query: 3118 IIIDTDKKNCVQASVTSSTEATKSKTVIKMEKEKIYLYLNQFTSKVPIMMVMKAMGMESD 2939
            +IIDTDKK  + ASVTSSTE  KSKTVI+MEK K+YL LNQF  K+PIM+VMKAMG+ESD
Sbjct: 197  VIIDTDKKGNINASVTSSTETVKSKTVIQMEKGKMYLLLNQFVKKIPIMVVMKAMGIESD 256

Query: 2938 QEVVQMIGRDPRYSELLLPSIEDCAKEAVYTQYQALEYLEQKVKKLPYSNALIEKEGRAL 2759
            QEVVQM+GRDPRYS LLLPSIE+CA   +YTQ +ALEYLE KVK+  + +   ++EGRA 
Sbjct: 257  QEVVQMVGRDPRYSALLLPSIEECANLDIYTQEKALEYLEGKVKRSTFGSPPNDREGRAF 316

Query: 2758 GILRDIFLANIPVQQDNFRPKCIYVAVMLRRMMEAILNKDAMDDKDYAGNKRXXXXXXXX 2579
             ILRD+FLAN+PV  +NFRPKC YVAVMLRRM+EA+LNKDAMDDKDY GNKR        
Sbjct: 317  SILRDVFLANVPVHNNNFRPKCFYVAVMLRRMVEAMLNKDAMDDKDYVGNKRLELSGQLV 376

Query: 2578 XXXXXXXFKTMNDEARKTIDTILAKPSRSSRFDISQFIVKDSITVGLERTLSTGNWDVKR 2399
                   FKTM  E +KT+D IL+KPSRSSRFD+SQFIV+DSITVGLERTLSTGN+DVKR
Sbjct: 377  SLLFEDLFKTMISEVQKTVDIILSKPSRSSRFDLSQFIVRDSITVGLERTLSTGNFDVKR 436

Query: 2398 FRMHRKGMTQVVARLSYIGTLGHMTKVSPQFEKSRKVSGPRALQPSQWGMLCPCDTPEGE 2219
            F+MHRKGMTQV+ARLS+IGTLGHMT+VSPQFEKSRKVSGPRALQPSQWGMLCPCDTPEGE
Sbjct: 437  FKMHRKGMTQVLARLSFIGTLGHMTRVSPQFEKSRKVSGPRALQPSQWGMLCPCDTPEGE 496

Query: 2218 ACGLVKNLALMTHVTTDEDEAPLVSLCYSLGVEDLELLSGEELHMPNSYLIILNGLILGK 2039
            ACGLVKNLALMTHVTTDE+E PL+SLCY LGVEDLELLSGEELH PNS+L+I NGLILGK
Sbjct: 497  ACGLVKNLALMTHVTTDEEEGPLISLCYCLGVEDLELLSGEELHNPNSFLVIFNGLILGK 556

Query: 2038 HRRPQWFANAMRKLRRAAKIGEFVSIFVNEKQRCVYIASDGGRVCRPLVIADKGVPRIKE 1859
            HRRP+ FA+ MRKLRRA KIGEFVS+FVNEKQRCVYIASDGGRVCRPLVIADKG+ RIKE
Sbjct: 557  HRRPKCFADVMRKLRRAGKIGEFVSVFVNEKQRCVYIASDGGRVCRPLVIADKGISRIKE 616

Query: 1858 HHMKELRDGVRTFNSFLKDGLIEYLDVNEENNALIALYEENAKEGTTHIEIEPFTILGVC 1679
            HHMKEL DGVR+F+ FL++GLIEYLDVNEENNALIALYE +A   TTHIEIEPFTILGV 
Sbjct: 617  HHMKELLDGVRSFDDFLREGLIEYLDVNEENNALIALYEGDATPDTTHIEIEPFTILGVI 676

Query: 1678 AGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNELTRMDTLIYLLVYPQRPLLTTRTIELV 1499
            AGLIPYPHHNQSPRNTYQCAMGKQAMGNIA+N+L RMD+L+YLLVYPQRPLLTTRTIELV
Sbjct: 677  AGLIPYPHHNQSPRNTYQCAMGKQAMGNIAFNQLCRMDSLLYLLVYPQRPLLTTRTIELV 736

Query: 1498 GYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCIVMKKMAAISQKYENGTSD 1319
            GYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCIV+KK  AI+QKY N TSD
Sbjct: 737  GYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCIVVKKYTAINQKYANSTSD 796

Query: 1318 RIIRPQREGYEAERMQILDDDGLAAPGEIIRPHDIYINKESPTITRGPVTSPMGLPDSAY 1139
            RI+RP R G  AERMQILDDDGLAAPGEII+P+D+YINKESP  TRG + SP G  DS Y
Sbjct: 797  RILRPDRTGPGAERMQILDDDGLAAPGEIIKPNDVYINKESPLETRGSIMSPTGQTDSRY 856

Query: 1138 KPSRQTYKGPEGETAVVDRVSLCSDKNSNLCIKFMIRHTRRPEVGDKFSSRHGQKGVCGT 959
            + +RQTYKGP+GET VVDRV+LCSDKN +LCIKF+IRHTRRPE+GDKFSSRHGQKGVCGT
Sbjct: 857  RSARQTYKGPDGETCVVDRVALCSDKNGDLCIKFLIRHTRRPELGDKFSSRHGQKGVCGT 916

Query: 958  IVQQEDLPFSERGICPDLIMNPHGFPSRMTVGKMIELLGSKAGVSSGRFHYGSAFGEPSG 779
            IVQQED PFSERGICPDLIMNPHGFPSRMTVGKMIELLG KAGVS GRFHYGSAFGEPSG
Sbjct: 917  IVQQEDFPFSERGICPDLIMNPHGFPSRMTVGKMIELLGGKAGVSCGRFHYGSAFGEPSG 976

Query: 778  HADRVEAISETLVKHGFSYSGKDFIYSGITGEPLQAYIFMGPIYYQKLKHMVLDKMHARG 599
            HAD VE+ISETLVKHGFSY+GKD IYSGITG PLQAYIFMGPIYYQKLKHMVLDKMHARG
Sbjct: 977  HADTVESISETLVKHGFSYNGKDMIYSGITGCPLQAYIFMGPIYYQKLKHMVLDKMHARG 1036

Query: 598  SGPRVMITRQPTEGRSRNGGLRVGEMERDCLIAYGASMLIYERLMISSDPFEVQVCRKCG 419
            SGPRVM+TRQPTEGR+RNGGLRVGEMERDCLIAYGASMLI+ERLM+SSDPFEVQVCR CG
Sbjct: 1037 SGPRVMLTRQPTEGRARNGGLRVGEMERDCLIAYGASMLIFERLMVSSDPFEVQVCRVCG 1096

Query: 418  LLGYYNFKLKTANCSTCKNGDNISTMKLPYACKLLFQELQAMNIVPRLKLTEA 260
            LLGYYN KLK   CSTCKNGDNIS+MKLPYACKLL QELQ+MNIVPRLKL EA
Sbjct: 1097 LLGYYNHKLKAGICSTCKNGDNISSMKLPYACKLLIQELQSMNIVPRLKLAEA 1149


>ref|XP_006432385.1| hypothetical protein CICLE_v10000078mg [Citrus clementina]
            gi|557534507|gb|ESR45625.1| hypothetical protein
            CICLE_v10000078mg [Citrus clementina]
          Length = 1149

 Score = 1901 bits (4924), Expect = 0.0
 Identities = 932/1133 (82%), Positives = 1019/1133 (89%)
 Frame = -2

Query: 3658 DKQSLAAPVKSAVDKFQLLPEFLKVRGLVKQHLDSFNYFLRTQIKKIVRANDLITSRVDP 3479
            DKQ LAAPVKS VDKFQLLPEFLKVRGLVKQHLDSFNYF+ T I+KIVRAND I S +DP
Sbjct: 17   DKQKLAAPVKSVVDKFQLLPEFLKVRGLVKQHLDSFNYFVNTGIRKIVRANDRIVSGIDP 76

Query: 3478 SIYLRYKDVRIGEPSIIIDGVTEKLTPHKCRLADLTYAAPIYVNIEYITGSHGSKTTQMK 3299
            SI+LR+KDVRIG+PS+ +DGV+EKL PH CRL+D+TYAAPI VNIEY+ GSH  KTT  K
Sbjct: 77   SIFLRFKDVRIGQPSMTVDGVSEKLNPHMCRLSDMTYAAPILVNIEYVQGSHTEKTTMEK 136

Query: 3298 RDVIIGRMPIMLRSCCCVLYGKDEEELARCGECPLDPGGYFVIKGTEKVILIQEQLSKNR 3119
             DV+IGR+PIMLRSC CVLYGKDE ELAR GECPLDPGGYF+IKGTEKV+LIQEQLSKNR
Sbjct: 137  NDVVIGRIPIMLRSCRCVLYGKDEAELARLGECPLDPGGYFIIKGTEKVLLIQEQLSKNR 196

Query: 3118 IIIDTDKKNCVQASVTSSTEATKSKTVIKMEKEKIYLYLNQFTSKVPIMMVMKAMGMESD 2939
            +IIDTDKK  + ASVTSSTE  KSKTVI+MEK K+YL LNQF  K+PIM+VMKAMGMESD
Sbjct: 197  VIIDTDKKGNINASVTSSTETVKSKTVIQMEKGKMYLLLNQFVKKIPIMVVMKAMGMESD 256

Query: 2938 QEVVQMIGRDPRYSELLLPSIEDCAKEAVYTQYQALEYLEQKVKKLPYSNALIEKEGRAL 2759
            QEVVQM+GRDPRYS LLLPSIE+CA   +YTQ +ALEYLE KVK+  + +   ++EGRA 
Sbjct: 257  QEVVQMVGRDPRYSALLLPSIEECANLDIYTQEKALEYLEGKVKRSTFGSPPNDREGRAF 316

Query: 2758 GILRDIFLANIPVQQDNFRPKCIYVAVMLRRMMEAILNKDAMDDKDYAGNKRXXXXXXXX 2579
             ILRD+FLAN+PV  +NFRPKC YVAVMLRRM+EA+LNKDAMDDKDY GNKR        
Sbjct: 317  SILRDVFLANVPVHNNNFRPKCFYVAVMLRRMVEAMLNKDAMDDKDYVGNKRLELSGQLV 376

Query: 2578 XXXXXXXFKTMNDEARKTIDTILAKPSRSSRFDISQFIVKDSITVGLERTLSTGNWDVKR 2399
                   FKTM  E +KT+D IL+KPSRSSRFD+SQFIV+DSITVGLERTLSTGN+DVKR
Sbjct: 377  SLLFEDLFKTMISEVQKTVDIILSKPSRSSRFDLSQFIVRDSITVGLERTLSTGNFDVKR 436

Query: 2398 FRMHRKGMTQVVARLSYIGTLGHMTKVSPQFEKSRKVSGPRALQPSQWGMLCPCDTPEGE 2219
            F+MHRKGMTQV+ARLS+IGTLGHMT+VSPQFEKSRKVSGPRALQPSQWGMLCPCDTPEGE
Sbjct: 437  FKMHRKGMTQVLARLSFIGTLGHMTRVSPQFEKSRKVSGPRALQPSQWGMLCPCDTPEGE 496

Query: 2218 ACGLVKNLALMTHVTTDEDEAPLVSLCYSLGVEDLELLSGEELHMPNSYLIILNGLILGK 2039
            ACGLVKNLALMTHVTTDE+E PL+SLCY LGVEDLELLSGEELH PNS+L+I NGLILGK
Sbjct: 497  ACGLVKNLALMTHVTTDEEEGPLISLCYCLGVEDLELLSGEELHNPNSFLVIFNGLILGK 556

Query: 2038 HRRPQWFANAMRKLRRAAKIGEFVSIFVNEKQRCVYIASDGGRVCRPLVIADKGVPRIKE 1859
            HRRP+ FA+ MRKLRRA KIGEFVS+FVNEKQRCVYIASDGGRVCRPLVIADKG+ RIKE
Sbjct: 557  HRRPKCFADVMRKLRRAGKIGEFVSVFVNEKQRCVYIASDGGRVCRPLVIADKGISRIKE 616

Query: 1858 HHMKELRDGVRTFNSFLKDGLIEYLDVNEENNALIALYEENAKEGTTHIEIEPFTILGVC 1679
            HHMKEL DGVR+F+ FL++GLIEYLDVNEENNALIALYE +A   TTHIEIEPFTILGV 
Sbjct: 617  HHMKELSDGVRSFDDFLREGLIEYLDVNEENNALIALYEGDATPDTTHIEIEPFTILGVI 676

Query: 1678 AGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNELTRMDTLIYLLVYPQRPLLTTRTIELV 1499
            AGLIPYPHHNQSPRNTYQCAMGKQAMGNIA+N+L RMD+L+YLLVYPQRPLLTTRTIELV
Sbjct: 677  AGLIPYPHHNQSPRNTYQCAMGKQAMGNIAFNQLCRMDSLLYLLVYPQRPLLTTRTIELV 736

Query: 1498 GYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCIVMKKMAAISQKYENGTSD 1319
            GYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCIV+KK  AI+QKY N TSD
Sbjct: 737  GYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCIVVKKYTAINQKYANSTSD 796

Query: 1318 RIIRPQREGYEAERMQILDDDGLAAPGEIIRPHDIYINKESPTITRGPVTSPMGLPDSAY 1139
            RI+RP R G  +ERMQILDDDGLAAPGEII+P+D+YINKESP  TRG + SP G  DS Y
Sbjct: 797  RILRPDRTGPGSERMQILDDDGLAAPGEIIKPNDVYINKESPLETRGSIMSPTGQTDSRY 856

Query: 1138 KPSRQTYKGPEGETAVVDRVSLCSDKNSNLCIKFMIRHTRRPEVGDKFSSRHGQKGVCGT 959
            + +RQTYKGP+GET VVDRV+LCSDKN +LCIKF+IRHTRRPE+GDKFSSRHGQKGVCGT
Sbjct: 857  RSARQTYKGPDGETCVVDRVALCSDKNGDLCIKFLIRHTRRPELGDKFSSRHGQKGVCGT 916

Query: 958  IVQQEDLPFSERGICPDLIMNPHGFPSRMTVGKMIELLGSKAGVSSGRFHYGSAFGEPSG 779
            IVQQED PFSERGICPDLIMNPHGFPSRMTVGKMIELLG KAGVS GRFHYGSAFGEPSG
Sbjct: 917  IVQQEDFPFSERGICPDLIMNPHGFPSRMTVGKMIELLGGKAGVSCGRFHYGSAFGEPSG 976

Query: 778  HADRVEAISETLVKHGFSYSGKDFIYSGITGEPLQAYIFMGPIYYQKLKHMVLDKMHARG 599
            HAD VE+ISETLVKHGFSY+GKD IYSGITG PLQAYIFMGPIYYQKLKHMVLDKMHARG
Sbjct: 977  HADTVESISETLVKHGFSYNGKDMIYSGITGCPLQAYIFMGPIYYQKLKHMVLDKMHARG 1036

Query: 598  SGPRVMITRQPTEGRSRNGGLRVGEMERDCLIAYGASMLIYERLMISSDPFEVQVCRKCG 419
            SGPRVM+TRQPTEGR+RNGGLRVGEMERDCLIAYGASMLI+ERLM+SSDPFEVQVCR CG
Sbjct: 1037 SGPRVMLTRQPTEGRARNGGLRVGEMERDCLIAYGASMLIFERLMVSSDPFEVQVCRVCG 1096

Query: 418  LLGYYNFKLKTANCSTCKNGDNISTMKLPYACKLLFQELQAMNIVPRLKLTEA 260
            LLGYYN KLK   CSTCKNG+NIS+MKLPYACKLL QELQ+MNIVPRLKL EA
Sbjct: 1097 LLGYYNHKLKAGICSTCKNGNNISSMKLPYACKLLIQELQSMNIVPRLKLAEA 1149


>ref|XP_010242622.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC2 isoform X2
            [Nelumbo nucifera]
          Length = 1140

 Score = 1879 bits (4868), Expect = 0.0
 Identities = 918/1134 (80%), Positives = 1016/1134 (89%)
 Frame = -2

Query: 3661 IDKQSLAAPVKSAVDKFQLLPEFLKVRGLVKQHLDSFNYFLRTQIKKIVRANDLITSRVD 3482
            +DKQ +A+PVKSAVDKFQLLPEFLKVRGLVKQHLDSFNYF+   IKKIV AN+ IT+  D
Sbjct: 9    VDKQFIASPVKSAVDKFQLLPEFLKVRGLVKQHLDSFNYFVNIGIKKIVEANNRITASSD 68

Query: 3481 PSIYLRYKDVRIGEPSIIIDGVTEKLTPHKCRLADLTYAAPIYVNIEYITGSHGSKTTQM 3302
            P+ YL+Y DV+IG PSI  D VT+ LTPH CRL+D+TYAAPI VNIEY+       T + 
Sbjct: 69   PNFYLKYTDVKIGTPSITADNVTDTLTPHICRLSDMTYAAPIMVNIEYVKKFCDQITIEK 128

Query: 3301 KRDVIIGRMPIMLRSCCCVLYGKDEEELARCGECPLDPGGYFVIKGTEKVILIQEQLSKN 3122
            K +V+IGRMPIMLRSCCCVLYGKDE ELAR GECPLDPGGYFV+KGTEKVILIQEQLSKN
Sbjct: 129  KENVVIGRMPIMLRSCCCVLYGKDEAELARLGECPLDPGGYFVVKGTEKVILIQEQLSKN 188

Query: 3121 RIIIDTDKKNCVQASVTSSTEATKSKTVIKMEKEKIYLYLNQFTSKVPIMMVMKAMGMES 2942
            RIIIDTDKK C+ ASVTSSTEATKSKT+I M+K KIYL LN F   +PIM+VMKAMGMES
Sbjct: 189  RIIIDTDKKGCLNASVTSSTEATKSKTIILMDKGKIYLRLNAFVKDIPIMVVMKAMGMES 248

Query: 2941 DQEVVQMIGRDPRYSELLLPSIEDCAKEAVYTQYQALEYLEQKVKKLPYSNALIEKEGRA 2762
            DQEVVQM+GRDP+Y  LLLPSI++CA   +YTQ QALE+LE+KVKK  +SN  +EKEGRA
Sbjct: 249  DQEVVQMVGRDPKYGALLLPSIQECAGHGIYTQQQALEFLEKKVKKFSFSNPALEKEGRA 308

Query: 2761 LGILRDIFLANIPVQQDNFRPKCIYVAVMLRRMMEAILNKDAMDDKDYAGNKRXXXXXXX 2582
            +  LR++F+AN+PV+Q+NFRPKCIYVAVM+RRMMEA LNKDAMDDKDY GNKR       
Sbjct: 309  MDTLRNVFIANVPVRQNNFRPKCIYVAVMMRRMMEAFLNKDAMDDKDYVGNKRLELSGQL 368

Query: 2581 XXXXXXXXFKTMNDEARKTIDTILAKPSRSSRFDISQFIVKDSITVGLERTLSTGNWDVK 2402
                    FKTMN EARK++D  LAK +RS   DI+++IVKDSIT GLER +STGNWD+K
Sbjct: 369  ISLLFEDLFKTMNSEARKSVDLQLAKVNRSVPVDIARYIVKDSITYGLERAISTGNWDLK 428

Query: 2401 RFRMHRKGMTQVVARLSYIGTLGHMTKVSPQFEKSRKVSGPRALQPSQWGMLCPCDTPEG 2222
            RFRMHRKGMTQV+ARLS+I TLGHMTK+SPQFEKSRKVSGPRALQPSQWGMLCPCDTPEG
Sbjct: 429  RFRMHRKGMTQVLARLSFIATLGHMTKISPQFEKSRKVSGPRALQPSQWGMLCPCDTPEG 488

Query: 2221 EACGLVKNLALMTHVTTDEDEAPLVSLCYSLGVEDLELLSGEELHMPNSYLIILNGLILG 2042
            EACGLVKNLALMTHVTTD++E PL+SLC+SLGVEDLELLS EE+H PNSYL+I NGLILG
Sbjct: 489  EACGLVKNLALMTHVTTDDEEGPLISLCHSLGVEDLELLSAEEIHTPNSYLVIFNGLILG 548

Query: 2041 KHRRPQWFANAMRKLRRAAKIGEFVSIFVNEKQRCVYIASDGGRVCRPLVIADKGVPRIK 1862
            KHR+P+ FANA+RKLRR+ KIGEFVS++VNE+QRCVYIASDGGRVCRPLVIADKGV RIK
Sbjct: 549  KHRQPKQFANALRKLRRSGKIGEFVSVYVNERQRCVYIASDGGRVCRPLVIADKGVSRIK 608

Query: 1861 EHHMKELRDGVRTFNSFLKDGLIEYLDVNEENNALIALYEENAKEGTTHIEIEPFTILGV 1682
            EHHMKEL DGVR+FN FL++GLIEYLDVNEENNALIALYE  A+  TTHIEIEPFTILGV
Sbjct: 609  EHHMKELMDGVRSFNDFLREGLIEYLDVNEENNALIALYEGEAEPETTHIEIEPFTILGV 668

Query: 1681 CAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNELTRMDTLIYLLVYPQRPLLTTRTIEL 1502
            CAGLIPYPHHNQSPRNTYQCAMGKQAMGN+AYN+L RMDTL+YLLVYPQRPLLTTRTIEL
Sbjct: 669  CAGLIPYPHHNQSPRNTYQCAMGKQAMGNVAYNQLCRMDTLLYLLVYPQRPLLTTRTIEL 728

Query: 1501 VGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCIVMKKMAAISQKYENGTS 1322
            VGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCIVMKK++AI+Q+Y N TS
Sbjct: 729  VGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCIVMKKLSAINQRYPNDTS 788

Query: 1321 DRIIRPQREGYEAERMQILDDDGLAAPGEIIRPHDIYINKESPTITRGPVTSPMGLPDSA 1142
            DRIIRPQ+    AE+  ILD DG+AAPGEIIRPHDIYINKE+P  TR   TSP GLPDSA
Sbjct: 789  DRIIRPQKVRSNAEK--ILDADGIAAPGEIIRPHDIYINKETPVNTRDKFTSPTGLPDSA 846

Query: 1141 YKPSRQTYKGPEGETAVVDRVSLCSDKNSNLCIKFMIRHTRRPEVGDKFSSRHGQKGVCG 962
            YK +RQTYKGP+GETAVVDRV+LCSDK++NLCIKF+IRHTRRPEVGDKFSSRHGQKGVCG
Sbjct: 847  YKSTRQTYKGPQGETAVVDRVALCSDKDNNLCIKFLIRHTRRPEVGDKFSSRHGQKGVCG 906

Query: 961  TIVQQEDLPFSERGICPDLIMNPHGFPSRMTVGKMIELLGSKAGVSSGRFHYGSAFGEPS 782
            TI+QQED PFSERGICPDLIMNPHGFPSRMT+GKMIELLG KAGVS GRFHYGSAFGEPS
Sbjct: 907  TIIQQEDFPFSERGICPDLIMNPHGFPSRMTIGKMIELLGGKAGVSCGRFHYGSAFGEPS 966

Query: 781  GHADRVEAISETLVKHGFSYSGKDFIYSGITGEPLQAYIFMGPIYYQKLKHMVLDKMHAR 602
            GHAD+VEAISETLV+HGFSY+GKDFIYSGITG PLQAYIFMGPIYYQKLKHMVLDKMHAR
Sbjct: 967  GHADKVEAISETLVRHGFSYNGKDFIYSGITGCPLQAYIFMGPIYYQKLKHMVLDKMHAR 1026

Query: 601  GSGPRVMITRQPTEGRSRNGGLRVGEMERDCLIAYGASMLIYERLMISSDPFEVQVCRKC 422
              GPRVM+TRQPTEGRSR+GGLR+GEMERDCLIAYGASMLI+ERLM+SSDPFEVQVCR C
Sbjct: 1027 ARGPRVMLTRQPTEGRSRDGGLRLGEMERDCLIAYGASMLIFERLMLSSDPFEVQVCRVC 1086

Query: 421  GLLGYYNFKLKTANCSTCKNGDNISTMKLPYACKLLFQELQAMNIVPRLKLTEA 260
            GLLGYYN KLKT  CSTCK+GD+IS MKLPYACKLLFQELQ+MN+VPRLKLTEA
Sbjct: 1087 GLLGYYNHKLKTGICSTCKSGDHISKMKLPYACKLLFQELQSMNVVPRLKLTEA 1140


>ref|XP_010242621.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC2 isoform X1
            [Nelumbo nucifera]
          Length = 1142

 Score = 1874 bits (4855), Expect = 0.0
 Identities = 918/1136 (80%), Positives = 1016/1136 (89%), Gaps = 2/1136 (0%)
 Frame = -2

Query: 3661 IDKQSLAAPVKSAVDKFQLLPEFLK--VRGLVKQHLDSFNYFLRTQIKKIVRANDLITSR 3488
            +DKQ +A+PVKSAVDKFQLLPEFLK  VRGLVKQHLDSFNYF+   IKKIV AN+ IT+ 
Sbjct: 9    VDKQFIASPVKSAVDKFQLLPEFLKLQVRGLVKQHLDSFNYFVNIGIKKIVEANNRITAS 68

Query: 3487 VDPSIYLRYKDVRIGEPSIIIDGVTEKLTPHKCRLADLTYAAPIYVNIEYITGSHGSKTT 3308
             DP+ YL+Y DV+IG PSI  D VT+ LTPH CRL+D+TYAAPI VNIEY+       T 
Sbjct: 69   SDPNFYLKYTDVKIGTPSITADNVTDTLTPHICRLSDMTYAAPIMVNIEYVKKFCDQITI 128

Query: 3307 QMKRDVIIGRMPIMLRSCCCVLYGKDEEELARCGECPLDPGGYFVIKGTEKVILIQEQLS 3128
            + K +V+IGRMPIMLRSCCCVLYGKDE ELAR GECPLDPGGYFV+KGTEKVILIQEQLS
Sbjct: 129  EKKENVVIGRMPIMLRSCCCVLYGKDEAELARLGECPLDPGGYFVVKGTEKVILIQEQLS 188

Query: 3127 KNRIIIDTDKKNCVQASVTSSTEATKSKTVIKMEKEKIYLYLNQFTSKVPIMMVMKAMGM 2948
            KNRIIIDTDKK C+ ASVTSSTEATKSKT+I M+K KIYL LN F   +PIM+VMKAMGM
Sbjct: 189  KNRIIIDTDKKGCLNASVTSSTEATKSKTIILMDKGKIYLRLNAFVKDIPIMVVMKAMGM 248

Query: 2947 ESDQEVVQMIGRDPRYSELLLPSIEDCAKEAVYTQYQALEYLEQKVKKLPYSNALIEKEG 2768
            ESDQEVVQM+GRDP+Y  LLLPSI++CA   +YTQ QALE+LE+KVKK  +SN  +EKEG
Sbjct: 249  ESDQEVVQMVGRDPKYGALLLPSIQECAGHGIYTQQQALEFLEKKVKKFSFSNPALEKEG 308

Query: 2767 RALGILRDIFLANIPVQQDNFRPKCIYVAVMLRRMMEAILNKDAMDDKDYAGNKRXXXXX 2588
            RA+  LR++F+AN+PV+Q+NFRPKCIYVAVM+RRMMEA LNKDAMDDKDY GNKR     
Sbjct: 309  RAMDTLRNVFIANVPVRQNNFRPKCIYVAVMMRRMMEAFLNKDAMDDKDYVGNKRLELSG 368

Query: 2587 XXXXXXXXXXFKTMNDEARKTIDTILAKPSRSSRFDISQFIVKDSITVGLERTLSTGNWD 2408
                      FKTMN EARK++D  LAK +RS   DI+++IVKDSIT GLER +STGNWD
Sbjct: 369  QLISLLFEDLFKTMNSEARKSVDLQLAKVNRSVPVDIARYIVKDSITYGLERAISTGNWD 428

Query: 2407 VKRFRMHRKGMTQVVARLSYIGTLGHMTKVSPQFEKSRKVSGPRALQPSQWGMLCPCDTP 2228
            +KRFRMHRKGMTQV+ARLS+I TLGHMTK+SPQFEKSRKVSGPRALQPSQWGMLCPCDTP
Sbjct: 429  LKRFRMHRKGMTQVLARLSFIATLGHMTKISPQFEKSRKVSGPRALQPSQWGMLCPCDTP 488

Query: 2227 EGEACGLVKNLALMTHVTTDEDEAPLVSLCYSLGVEDLELLSGEELHMPNSYLIILNGLI 2048
            EGEACGLVKNLALMTHVTTD++E PL+SLC+SLGVEDLELLS EE+H PNSYL+I NGLI
Sbjct: 489  EGEACGLVKNLALMTHVTTDDEEGPLISLCHSLGVEDLELLSAEEIHTPNSYLVIFNGLI 548

Query: 2047 LGKHRRPQWFANAMRKLRRAAKIGEFVSIFVNEKQRCVYIASDGGRVCRPLVIADKGVPR 1868
            LGKHR+P+ FANA+RKLRR+ KIGEFVS++VNE+QRCVYIASDGGRVCRPLVIADKGV R
Sbjct: 549  LGKHRQPKQFANALRKLRRSGKIGEFVSVYVNERQRCVYIASDGGRVCRPLVIADKGVSR 608

Query: 1867 IKEHHMKELRDGVRTFNSFLKDGLIEYLDVNEENNALIALYEENAKEGTTHIEIEPFTIL 1688
            IKEHHMKEL DGVR+FN FL++GLIEYLDVNEENNALIALYE  A+  TTHIEIEPFTIL
Sbjct: 609  IKEHHMKELMDGVRSFNDFLREGLIEYLDVNEENNALIALYEGEAEPETTHIEIEPFTIL 668

Query: 1687 GVCAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNELTRMDTLIYLLVYPQRPLLTTRTI 1508
            GVCAGLIPYPHHNQSPRNTYQCAMGKQAMGN+AYN+L RMDTL+YLLVYPQRPLLTTRTI
Sbjct: 669  GVCAGLIPYPHHNQSPRNTYQCAMGKQAMGNVAYNQLCRMDTLLYLLVYPQRPLLTTRTI 728

Query: 1507 ELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCIVMKKMAAISQKYENG 1328
            ELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCIVMKK++AI+Q+Y N 
Sbjct: 729  ELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCIVMKKLSAINQRYPND 788

Query: 1327 TSDRIIRPQREGYEAERMQILDDDGLAAPGEIIRPHDIYINKESPTITRGPVTSPMGLPD 1148
            TSDRIIRPQ+    AE+  ILD DG+AAPGEIIRPHDIYINKE+P  TR   TSP GLPD
Sbjct: 789  TSDRIIRPQKVRSNAEK--ILDADGIAAPGEIIRPHDIYINKETPVNTRDKFTSPTGLPD 846

Query: 1147 SAYKPSRQTYKGPEGETAVVDRVSLCSDKNSNLCIKFMIRHTRRPEVGDKFSSRHGQKGV 968
            SAYK +RQTYKGP+GETAVVDRV+LCSDK++NLCIKF+IRHTRRPEVGDKFSSRHGQKGV
Sbjct: 847  SAYKSTRQTYKGPQGETAVVDRVALCSDKDNNLCIKFLIRHTRRPEVGDKFSSRHGQKGV 906

Query: 967  CGTIVQQEDLPFSERGICPDLIMNPHGFPSRMTVGKMIELLGSKAGVSSGRFHYGSAFGE 788
            CGTI+QQED PFSERGICPDLIMNPHGFPSRMT+GKMIELLG KAGVS GRFHYGSAFGE
Sbjct: 907  CGTIIQQEDFPFSERGICPDLIMNPHGFPSRMTIGKMIELLGGKAGVSCGRFHYGSAFGE 966

Query: 787  PSGHADRVEAISETLVKHGFSYSGKDFIYSGITGEPLQAYIFMGPIYYQKLKHMVLDKMH 608
            PSGHAD+VEAISETLV+HGFSY+GKDFIYSGITG PLQAYIFMGPIYYQKLKHMVLDKMH
Sbjct: 967  PSGHADKVEAISETLVRHGFSYNGKDFIYSGITGCPLQAYIFMGPIYYQKLKHMVLDKMH 1026

Query: 607  ARGSGPRVMITRQPTEGRSRNGGLRVGEMERDCLIAYGASMLIYERLMISSDPFEVQVCR 428
            AR  GPRVM+TRQPTEGRSR+GGLR+GEMERDCLIAYGASMLI+ERLM+SSDPFEVQVCR
Sbjct: 1027 ARARGPRVMLTRQPTEGRSRDGGLRLGEMERDCLIAYGASMLIFERLMLSSDPFEVQVCR 1086

Query: 427  KCGLLGYYNFKLKTANCSTCKNGDNISTMKLPYACKLLFQELQAMNIVPRLKLTEA 260
             CGLLGYYN KLKT  CSTCK+GD+IS MKLPYACKLLFQELQ+MN+VPRLKLTEA
Sbjct: 1087 VCGLLGYYNHKLKTGICSTCKSGDHISKMKLPYACKLLFQELQSMNVVPRLKLTEA 1142


>ref|XP_012459628.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC2 [Gossypium
            raimondii] gi|763808128|gb|KJB75030.1| hypothetical
            protein B456_012G019600 [Gossypium raimondii]
          Length = 1158

 Score = 1873 bits (4851), Expect = 0.0
 Identities = 926/1157 (80%), Positives = 1024/1157 (88%), Gaps = 3/1157 (0%)
 Frame = -2

Query: 3721 MGVKEEDSALLN--DLQEQGLKIDKQSLAAPVKSAVDKFQLLPEFLKVRGLVKQHLDSFN 3548
            MG+K+ED    N  +L    + +DKQ LAAP+KSAVDKFQLLPEFLKVRGLVKQHLDSFN
Sbjct: 1    MGLKQEDILNKNSKNLNVSEIPVDKQKLAAPIKSAVDKFQLLPEFLKVRGLVKQHLDSFN 60

Query: 3547 YFLRTQIKKIVRANDLITSRVDPSIYLRYKDVRIGEPSIIIDGVTEKLTPHKCRLADLTY 3368
            YF+ T IKKIVRAND I S +DPSIYLR+KDVRIGEPS+ +DG+TEK+ PH CRL+++TY
Sbjct: 61   YFVNTGIKKIVRANDRIVSDIDPSIYLRFKDVRIGEPSMTVDGITEKINPHACRLSEMTY 120

Query: 3367 AAPIYVNIEYITGSHGSKTTQMKRDVIIGRMPIMLRSCCCVLYGKDEEELARCGECPLDP 3188
            AAPI VNIEYI GSHG KT   K D++IGRMPIMLRSCCCVL GKDE ELAR GECPLDP
Sbjct: 121  AAPILVNIEYIQGSHGQKTRLEKNDLVIGRMPIMLRSCCCVLQGKDEAELARLGECPLDP 180

Query: 3187 GGYFVIKGTEKVILIQEQLSKNRIIIDTDKKNCVQASVTSSTEATKSKTVIKMEKEKIYL 3008
            GGYFVIKGTEKVILIQEQLSKNRIIID DKK  + ASVTSS+EATKSKTVI+MEKEKIYL
Sbjct: 181  GGYFVIKGTEKVILIQEQLSKNRIIIDADKKGNINASVTSSSEATKSKTVIQMEKEKIYL 240

Query: 3007 YLNQFTSKVPIMMVMKAMGMESDQEVVQMIGRDPRYSELLLPSIEDCAKEAVYTQYQALE 2828
             LNQF  K+PIM+VMKAMGMESDQEVVQM+GRDPR+S LLLPSIE+CA   +YT+ QAL 
Sbjct: 241  LLNQFVKKIPIMVVMKAMGMESDQEVVQMLGRDPRFSALLLPSIEECAGIGIYTKEQALA 300

Query: 2827 YLEQKVKKLPYSNALIEKEGRALGILRDIFLANIPVQQDNFRPKCIYVAVMLRRMMEAIL 2648
            YL+ K K+  Y+++  +++GRA  ILRD+F+AN+PV+ +NFRPKC+YVAVMLRRMMEAIL
Sbjct: 301  YLDTKAKRPLYASSASDQDGRAFCILRDVFIANVPVRCNNFRPKCLYVAVMLRRMMEAIL 360

Query: 2647 NKDAMDDKDYAGNKRXXXXXXXXXXXXXXXFKTMNDEARKTIDTILAKPSRSSRFDISQF 2468
            NKDAMDDKDY GNKR               FKT   + +K+ID++L+K SRSS  D SQF
Sbjct: 361  NKDAMDDKDYVGNKRLELSGQLISLLFEDLFKTTLAQVKKSIDSVLSKTSRSSALDPSQF 420

Query: 2467 IVK-DSITVGLERTLSTGNWDVKRFRMHRKGMTQVVARLSYIGTLGHMTKVSPQFEKSRK 2291
            + + + IT GLERTLSTGN+D++RFRMHRKGMTQV+ARLS+IGTLG MTKVSPQFEKSRK
Sbjct: 421  LRRMEFITTGLERTLSTGNFDIQRFRMHRKGMTQVLARLSFIGTLGFMTKVSPQFEKSRK 480

Query: 2290 VSGPRALQPSQWGMLCPCDTPEGEACGLVKNLALMTHVTTDEDEAPLVSLCYSLGVEDLE 2111
            VSGPRALQPSQWGMLCPCDTPEGEACGLVKNLALMTHVTTDEDE PLVSLCY LGVEDLE
Sbjct: 481  VSGPRALQPSQWGMLCPCDTPEGEACGLVKNLALMTHVTTDEDEGPLVSLCYCLGVEDLE 540

Query: 2110 LLSGEELHMPNSYLIILNGLILGKHRRPQWFANAMRKLRRAAKIGEFVSIFVNEKQRCVY 1931
            LLSGEELH PNS+L++LNGLILGKHRRPQ FANA+RKLRRA K+GEFVS+FVNEKQRCVY
Sbjct: 541  LLSGEELHTPNSFLVMLNGLILGKHRRPQHFANALRKLRRAGKVGEFVSVFVNEKQRCVY 600

Query: 1930 IASDGGRVCRPLVIADKGVPRIKEHHMKELRDGVRTFNSFLKDGLIEYLDVNEENNALIA 1751
            IASDGGRVCRPLVIADKG+ RIKEHHMKEL DGVRTF+ FL DGLIEYLDVNEENNALIA
Sbjct: 601  IASDGGRVCRPLVIADKGISRIKEHHMKELLDGVRTFDDFLSDGLIEYLDVNEENNALIA 660

Query: 1750 LYEENAKEGTTHIEIEPFTILGVCAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNELTR 1571
            LYE  A   TTHIEIEPFTILGV AGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYN+L R
Sbjct: 661  LYEGEATPETTHIEIEPFTILGVIAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNQLCR 720

Query: 1570 MDTLIYLLVYPQRPLLTTRTIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDR 1391
            MDTL+YLLVYPQRPLLTTRTIELVGYDKLGAGQNATVAV+SYSGYDIEDAIVMNKSSLDR
Sbjct: 721  MDTLLYLLVYPQRPLLTTRTIELVGYDKLGAGQNATVAVISYSGYDIEDAIVMNKSSLDR 780

Query: 1390 GFGRCIVMKKMAAISQKYENGTSDRIIRPQREGYEAERMQILDDDGLAAPGEIIRPHDIY 1211
            GFGRCIVMKK + + QKYENG +DRI+RPQR G  +E+M ILDDDG+A+PGEIIRP+DI 
Sbjct: 781  GFGRCIVMKKSSNVIQKYENGATDRILRPQRTGPGSEKMLILDDDGIASPGEIIRPNDIL 840

Query: 1210 INKESPTITRGPVTSPMGLPDSAYKPSRQTYKGPEGETAVVDRVSLCSDKNSNLCIKFMI 1031
            +NKE P  TRG   S   LPDSAYKP RQ+YKGPEGE+ V+DRVSL +D+N NL IKF+I
Sbjct: 841  LNKEVPIHTRGTRVSSDSLPDSAYKPVRQSYKGPEGESCVMDRVSLSTDRNGNLSIKFLI 900

Query: 1030 RHTRRPEVGDKFSSRHGQKGVCGTIVQQEDLPFSERGICPDLIMNPHGFPSRMTVGKMIE 851
            RHTRRPE+GDKFSSRHGQKGVCG I+QQED PFSERGICPDLIMNPHGFPSRMTVGKMIE
Sbjct: 901  RHTRRPELGDKFSSRHGQKGVCGIIIQQEDFPFSERGICPDLIMNPHGFPSRMTVGKMIE 960

Query: 850  LLGSKAGVSSGRFHYGSAFGEPSGHADRVEAISETLVKHGFSYSGKDFIYSGITGEPLQA 671
            LLG KAGVS GRFHYGSAFGEPSGHAD+VE ISETLVKHGF Y+GKDFIYSGITG PLQA
Sbjct: 961  LLGGKAGVSCGRFHYGSAFGEPSGHADKVETISETLVKHGFCYNGKDFIYSGITGCPLQA 1020

Query: 670  YIFMGPIYYQKLKHMVLDKMHARGSGPRVMITRQPTEGRSRNGGLRVGEMERDCLIAYGA 491
            YIFMGPIYYQKLKHMVLDKMHARG+GPRVM+TRQPTEGR+R GGLRVGEMERDCLIAYGA
Sbjct: 1021 YIFMGPIYYQKLKHMVLDKMHARGNGPRVMLTRQPTEGRARKGGLRVGEMERDCLIAYGA 1080

Query: 490  SMLIYERLMISSDPFEVQVCRKCGLLGYYNFKLKTANCSTCKNGDNISTMKLPYACKLLF 311
            SMLI+ERLM+SSDPFEVQVCRKCGLLGYY+ KLKT  CS+CKNGD++STM+LPYACKLL 
Sbjct: 1081 SMLIFERLMVSSDPFEVQVCRKCGLLGYYSHKLKTGICSSCKNGDDVSTMQLPYACKLLI 1140

Query: 310  QELQAMNIVPRLKLTEA 260
            QELQ+MNIVPRLKL EA
Sbjct: 1141 QELQSMNIVPRLKLAEA 1157


>gb|KJB75029.1| hypothetical protein B456_012G019600 [Gossypium raimondii]
          Length = 1159

 Score = 1867 bits (4837), Expect = 0.0
 Identities = 925/1158 (79%), Positives = 1024/1158 (88%), Gaps = 4/1158 (0%)
 Frame = -2

Query: 3721 MGVKEEDSALLN--DLQEQGLKIDKQSLAAPVKSAVDKFQLLPEFLKVRGLVKQHLDSFN 3548
            MG+K+ED    N  +L    + +DKQ LAAP+KSAVDKFQLLPEFLKVRGLVKQHLDSFN
Sbjct: 1    MGLKQEDILNKNSKNLNVSEIPVDKQKLAAPIKSAVDKFQLLPEFLKVRGLVKQHLDSFN 60

Query: 3547 YFLRTQIKKIVRANDLITSRVDPSIYLRYKDVRIGEPSIIIDGVTEKLTPHKCRLADLTY 3368
            YF+ T IKKIVRAND I S +DPSIYLR+KDVRIGEPS+ +DG+TEK+ PH CRL+++TY
Sbjct: 61   YFVNTGIKKIVRANDRIVSDIDPSIYLRFKDVRIGEPSMTVDGITEKINPHACRLSEMTY 120

Query: 3367 AAPIYVNIEYITGSHGSKTTQMKRDVIIGRMPIMLRSCCCVLYGKDEEELARCGECPLDP 3188
            AAPI VNIEYI GSHG KT   K D++IGRMPIMLRSCCCVL GKDE ELAR GECPLDP
Sbjct: 121  AAPILVNIEYIQGSHGQKTRLEKNDLVIGRMPIMLRSCCCVLQGKDEAELARLGECPLDP 180

Query: 3187 GGYFVIKGTEKVILIQEQLSKNRIIIDTDKKNCVQASVTSSTEATKSKTVIKMEKEKIYL 3008
            GGYFVIKGTEKVILIQEQLSKNRIIID DKK  + ASVTSS+EATKSKTVI+MEKEKIYL
Sbjct: 181  GGYFVIKGTEKVILIQEQLSKNRIIIDADKKGNINASVTSSSEATKSKTVIQMEKEKIYL 240

Query: 3007 YLNQFTSKVPIMMVMKAMGMESDQEVVQMIGRDPRYSELLLPSIEDCAKEAVYTQYQALE 2828
             LNQF  K+PIM+VMKAMGMESDQEVVQM+GRDPR+S LLLPSIE+CA   +YT+ QAL 
Sbjct: 241  LLNQFVKKIPIMVVMKAMGMESDQEVVQMLGRDPRFSALLLPSIEECAGIGIYTKEQALA 300

Query: 2827 YLEQKVKKLPYSNALIEKEGRALGILRDIFLANIPVQQDNFRPKCIYVAVMLRRMMEAIL 2648
            YL+ K K+  Y+++  +++GRA  ILRD+F+AN+PV+ +NFRPKC+YVAVMLRRMMEAIL
Sbjct: 301  YLDTKAKRPLYASSASDQDGRAFCILRDVFIANVPVRCNNFRPKCLYVAVMLRRMMEAIL 360

Query: 2647 NKDAMDDKDYAGNKRXXXXXXXXXXXXXXXFKTMNDEARKTIDTILAKPSRSSRFDISQF 2468
            NKDAMDDKDY GNKR               FKT   + +K+ID++L+K SRSS  D SQF
Sbjct: 361  NKDAMDDKDYVGNKRLELSGQLISLLFEDLFKTTLAQVKKSIDSVLSKTSRSSALDPSQF 420

Query: 2467 IVK-DSITVGLERTLSTGNWDVKRFRMHRKGMTQVVARLSYIGTLGHMTKVSPQFEKSRK 2291
            + + + IT GLERTLSTGN+D++RFRMHRKGMTQV+ARLS+IGTLG MTKVSPQFEKSRK
Sbjct: 421  LRRMEFITTGLERTLSTGNFDIQRFRMHRKGMTQVLARLSFIGTLGFMTKVSPQFEKSRK 480

Query: 2290 VSGPRALQPSQWGMLCPCDTPEGEACGLVKNLALMTHVTTDEDEAPLVSLCYSLGVEDLE 2111
            VSGPRALQPSQWGMLCPCDTPEGEACGLVKNLALMTHVTTDEDE PLVSLCY LGVEDLE
Sbjct: 481  VSGPRALQPSQWGMLCPCDTPEGEACGLVKNLALMTHVTTDEDEGPLVSLCYCLGVEDLE 540

Query: 2110 LLSGEELHMPNSYLIILNGLILGKHRRPQWFANAMRKLRRAAKIGEFVSIFVNEKQRCVY 1931
            LLSGEELH PNS+L++LNGLILGKHRRPQ FANA+RKLRRA K+GEFVS+FVNEKQRCVY
Sbjct: 541  LLSGEELHTPNSFLVMLNGLILGKHRRPQHFANALRKLRRAGKVGEFVSVFVNEKQRCVY 600

Query: 1930 IASDGGRVCRPLVIADKGVPRIKEHHMKELRDGVRTFNSFLKDGLIEYLDVNEENNALIA 1751
            IASDGGRVCRPLVIADKG+ RIKEHHMKEL DGVRTF+ FL DGLIEYLDVNEENNALIA
Sbjct: 601  IASDGGRVCRPLVIADKGISRIKEHHMKELLDGVRTFDDFLSDGLIEYLDVNEENNALIA 660

Query: 1750 LYEENAKEGTTHIEIEPFTILGVCAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNELTR 1571
            LYE  A   TTHIEIEPFTILGV AGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYN+L R
Sbjct: 661  LYEGEATPETTHIEIEPFTILGVIAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNQLCR 720

Query: 1570 MDTLIYLLVYPQRPLLTTRTIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDR 1391
            MDTL+YLLVYPQRPLLTTRTIELVGYDKLGAGQNATVAV+SYSGYDIEDAIVMNKSSLDR
Sbjct: 721  MDTLLYLLVYPQRPLLTTRTIELVGYDKLGAGQNATVAVISYSGYDIEDAIVMNKSSLDR 780

Query: 1390 GFGRCIVMKKMAA-ISQKYENGTSDRIIRPQREGYEAERMQILDDDGLAAPGEIIRPHDI 1214
            GFGRCIVMK  ++ + QKYENG +DRI+RPQR G  +E+M ILDDDG+A+PGEIIRP+DI
Sbjct: 781  GFGRCIVMKNRSSNVIQKYENGATDRILRPQRTGPGSEKMLILDDDGIASPGEIIRPNDI 840

Query: 1213 YINKESPTITRGPVTSPMGLPDSAYKPSRQTYKGPEGETAVVDRVSLCSDKNSNLCIKFM 1034
             +NKE P  TRG   S   LPDSAYKP RQ+YKGPEGE+ V+DRVSL +D+N NL IKF+
Sbjct: 841  LLNKEVPIHTRGTRVSSDSLPDSAYKPVRQSYKGPEGESCVMDRVSLSTDRNGNLSIKFL 900

Query: 1033 IRHTRRPEVGDKFSSRHGQKGVCGTIVQQEDLPFSERGICPDLIMNPHGFPSRMTVGKMI 854
            IRHTRRPE+GDKFSSRHGQKGVCG I+QQED PFSERGICPDLIMNPHGFPSRMTVGKMI
Sbjct: 901  IRHTRRPELGDKFSSRHGQKGVCGIIIQQEDFPFSERGICPDLIMNPHGFPSRMTVGKMI 960

Query: 853  ELLGSKAGVSSGRFHYGSAFGEPSGHADRVEAISETLVKHGFSYSGKDFIYSGITGEPLQ 674
            ELLG KAGVS GRFHYGSAFGEPSGHAD+VE ISETLVKHGF Y+GKDFIYSGITG PLQ
Sbjct: 961  ELLGGKAGVSCGRFHYGSAFGEPSGHADKVETISETLVKHGFCYNGKDFIYSGITGCPLQ 1020

Query: 673  AYIFMGPIYYQKLKHMVLDKMHARGSGPRVMITRQPTEGRSRNGGLRVGEMERDCLIAYG 494
            AYIFMGPIYYQKLKHMVLDKMHARG+GPRVM+TRQPTEGR+R GGLRVGEMERDCLIAYG
Sbjct: 1021 AYIFMGPIYYQKLKHMVLDKMHARGNGPRVMLTRQPTEGRARKGGLRVGEMERDCLIAYG 1080

Query: 493  ASMLIYERLMISSDPFEVQVCRKCGLLGYYNFKLKTANCSTCKNGDNISTMKLPYACKLL 314
            ASMLI+ERLM+SSDPFEVQVCRKCGLLGYY+ KLKT  CS+CKNGD++STM+LPYACKLL
Sbjct: 1081 ASMLIFERLMVSSDPFEVQVCRKCGLLGYYSHKLKTGICSSCKNGDDVSTMQLPYACKLL 1140

Query: 313  FQELQAMNIVPRLKLTEA 260
             QELQ+MNIVPRLKL EA
Sbjct: 1141 IQELQSMNIVPRLKLAEA 1158


>ref|XP_011003287.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC2 isoform X2
            [Populus euphratica]
          Length = 1150

 Score = 1855 bits (4804), Expect = 0.0
 Identities = 914/1135 (80%), Positives = 1002/1135 (88%), Gaps = 1/1135 (0%)
 Frame = -2

Query: 3661 IDKQS-LAAPVKSAVDKFQLLPEFLKVRGLVKQHLDSFNYFLRTQIKKIVRANDLITSRV 3485
            IDKQ   AAPVKSAVDKFQLLPEFLKVRGLVKQHLDSFNYF+   IKKIVRAND I S V
Sbjct: 19   IDKQKHAAAPVKSAVDKFQLLPEFLKVRGLVKQHLDSFNYFINIGIKKIVRANDRIVSTV 78

Query: 3484 DPSIYLRYKDVRIGEPSIIIDGVTEKLTPHKCRLADLTYAAPIYVNIEYITGSHGSKTTQ 3305
            DPS+YLR+ DV+IG+PS+++D ++E++TPH CRL+D TYAAPI+VNIEYI+GSHG K   
Sbjct: 79   DPSLYLRFTDVKIGKPSMVVDAISEQITPHMCRLSDTTYAAPIWVNIEYISGSHGRKEKM 138

Query: 3304 MKRDVIIGRMPIMLRSCCCVLYGKDEEELARCGECPLDPGGYFVIKGTEKVILIQEQLSK 3125
            +K DV+IGRMPIMLRSCCCVL GK+E ELAR GECPLDPGGYFV+KGTEKVILIQEQLSK
Sbjct: 139  IKNDVVIGRMPIMLRSCCCVLSGKNEAELARLGECPLDPGGYFVVKGTEKVILIQEQLSK 198

Query: 3124 NRIIIDTDKKNCVQASVTSSTEATKSKTVIKMEKEKIYLYLNQFTSKVPIMMVMKAMGME 2945
            NRIIID DKK  + ASVTSSTEATKSKTVI MEKEK+YL LNQF  K+PIM+VMKAMGME
Sbjct: 199  NRIIIDNDKKGNINASVTSSTEATKSKTVILMEKEKMYLCLNQFAKKIPIMVVMKAMGME 258

Query: 2944 SDQEVVQMIGRDPRYSELLLPSIEDCAKEAVYTQYQALEYLEQKVKKLPYSNALIEKEGR 2765
            SDQEVVQM+GRDPRYS LLLPSIE+CA   VYT+ QALEYLE  VK+  YS++  EKE R
Sbjct: 259  SDQEVVQMVGRDPRYSALLLPSIEECASHGVYTREQALEYLEAMVKRSTYSSSSTEKENR 318

Query: 2764 ALGILRDIFLANIPVQQDNFRPKCIYVAVMLRRMMEAILNKDAMDDKDYAGNKRXXXXXX 2585
            AL ILRD+F+AN+PV+++NFRPKCIYVAVMLRRMMEA+LNKDAMDDKDY GNKR      
Sbjct: 319  ALAILRDVFIANVPVRKNNFRPKCIYVAVMLRRMMEALLNKDAMDDKDYVGNKRLELSGQ 378

Query: 2584 XXXXXXXXXFKTMNDEARKTIDTILAKPSRSSRFDISQFIVKDSITVGLERTLSTGNWDV 2405
                     FKTM  E +K  D +L K +RSSRFD SQ+IV+DSIT GLER LSTGNWDV
Sbjct: 379  LISLLFEDLFKTMITEVQKIADALLVKQNRSSRFDFSQYIVRDSITNGLERALSTGNWDV 438

Query: 2404 KRFRMHRKGMTQVVARLSYIGTLGHMTKVSPQFEKSRKVSGPRALQPSQWGMLCPCDTPE 2225
            KRFRM+RKG+TQV+ RLSY+ +LGHMT++SPQFEKSRKVSGPRALQPSQWGMLCPCDTPE
Sbjct: 439  KRFRMNRKGVTQVLVRLSYMASLGHMTRISPQFEKSRKVSGPRALQPSQWGMLCPCDTPE 498

Query: 2224 GEACGLVKNLALMTHVTTDEDEAPLVSLCYSLGVEDLELLSGEELHMPNSYLIILNGLIL 2045
            GEACGLVKNLALMTHVTTDE+E+PL+SLC  LGVEDLELLSGEELH PNS+L+I NGLIL
Sbjct: 499  GEACGLVKNLALMTHVTTDEEESPLISLCKCLGVEDLELLSGEELHTPNSFLVIFNGLIL 558

Query: 2044 GKHRRPQWFANAMRKLRRAAKIGEFVSIFVNEKQRCVYIASDGGRVCRPLVIADKGVPRI 1865
            GKHRRP  FANAMRKLRRA KIGEFVS+FVNEKQR VYIASDGGRVCRPLVIADKGV RI
Sbjct: 559  GKHRRPHQFANAMRKLRRAGKIGEFVSVFVNEKQRAVYIASDGGRVCRPLVIADKGVSRI 618

Query: 1864 KEHHMKELRDGVRTFNSFLKDGLIEYLDVNEENNALIALYEENAKEGTTHIEIEPFTILG 1685
            KEHHM+EL DG RTF+ FL +GLIEYLDVNEENNALIALYE  A   TTHIEIEPFTILG
Sbjct: 619  KEHHMRELMDGARTFDDFLHEGLIEYLDVNEENNALIALYEWEATPETTHIEIEPFTILG 678

Query: 1684 VCAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNELTRMDTLIYLLVYPQRPLLTTRTIE 1505
            V AGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYN+L RMD+L+YLLVYPQRPLLTTRTIE
Sbjct: 679  VVAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNQLGRMDSLLYLLVYPQRPLLTTRTIE 738

Query: 1504 LVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCIVMKKMAAISQKYENGT 1325
            LVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNK+SLDRGFGRCIV+KK    +QKYENG 
Sbjct: 739  LVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKASLDRGFGRCIVLKKYTCTNQKYENGA 798

Query: 1324 SDRIIRPQREGYEAERMQILDDDGLAAPGEIIRPHDIYINKESPTITRGPVTSPMGLPDS 1145
            SDRI+RP++     ER ++LDDDGLAAPGEIIR  DIYINKESP  TRGP+ S   L D 
Sbjct: 799  SDRILRPRK---NEERERVLDDDGLAAPGEIIRHGDIYINKESPIETRGPLKSAAALADV 855

Query: 1144 AYKPSRQTYKGPEGETAVVDRVSLCSDKNSNLCIKFMIRHTRRPEVGDKFSSRHGQKGVC 965
             Y+P  Q +KG EGE+ VVDRV+LCSDKN+NLCIK+ IRHTRRPEVGDKFSSRHGQKGVC
Sbjct: 856  KYRPCAQIFKGTEGESCVVDRVALCSDKNNNLCIKYKIRHTRRPEVGDKFSSRHGQKGVC 915

Query: 964  GTIVQQEDLPFSERGICPDLIMNPHGFPSRMTVGKMIELLGSKAGVSSGRFHYGSAFGEP 785
            GTI+QQED PFSERGICPDLIMNPHGFPSRMTVGKMIELLG KAGVS GRFHYGSAFGEP
Sbjct: 916  GTIIQQEDFPFSERGICPDLIMNPHGFPSRMTVGKMIELLGGKAGVSCGRFHYGSAFGEP 975

Query: 784  SGHADRVEAISETLVKHGFSYSGKDFIYSGITGEPLQAYIFMGPIYYQKLKHMVLDKMHA 605
            SGHADRVEAISETLVKHGFSY+GKDFIYSGITG PLQAYIFMGPIYYQKLKHMVLDKMHA
Sbjct: 976  SGHADRVEAISETLVKHGFSYNGKDFIYSGITGCPLQAYIFMGPIYYQKLKHMVLDKMHA 1035

Query: 604  RGSGPRVMITRQPTEGRSRNGGLRVGEMERDCLIAYGASMLIYERLMISSDPFEVQVCRK 425
            RGSGPRVM+TRQPT+GR+RNGGLRVGEME+DCL+AYG SML+YERLM+SSD FE QVCR 
Sbjct: 1036 RGSGPRVMLTRQPTDGRARNGGLRVGEMEKDCLVAYGTSMLLYERLMVSSDQFEAQVCRA 1095

Query: 424  CGLLGYYNFKLKTANCSTCKNGDNISTMKLPYACKLLFQELQAMNIVPRLKLTEA 260
            CGLLGYYN KLK A C+TCKNGD +STMKLPYACKLL QELQ+MNIVPRL+L EA
Sbjct: 1096 CGLLGYYNQKLKAAMCTTCKNGDKVSTMKLPYACKLLIQELQSMNIVPRLRLAEA 1150


>ref|XP_010043725.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc2 [Eucalyptus
            grandis]
          Length = 1152

 Score = 1855 bits (4804), Expect = 0.0
 Identities = 918/1144 (80%), Positives = 1008/1144 (88%), Gaps = 10/1144 (0%)
 Frame = -2

Query: 3661 IDKQSLAAPVKSAVDKFQLLPEFLKVRGLVKQHLDSFNYFLRTQIKKIVRANDLITSRVD 3482
            +D + LAAP+KSAVDKFQL+PEFLKVRGLVKQHLDSFNYF  T+IKKIVRAND I S VD
Sbjct: 12   VDYRKLAAPIKSAVDKFQLVPEFLKVRGLVKQHLDSFNYFANTEIKKIVRANDKIVSSVD 71

Query: 3481 PSIYLRYKDVRIGEPSIIIDGVTEKLTPHKCRLADLTYAAPIYVNIEYITGSHGSKTTQM 3302
            P++Y+R+KDVRIG P+  ++G+ E L+P KCRL D TYAAP+ V++EY  GSHG  +   
Sbjct: 72   PNLYVRFKDVRIGNPTEALEGIVEDLSPQKCRLTDKTYAAPVLVDVEYTKGSHGGYSLLE 131

Query: 3301 KRDVIIGRMPIMLRSCCCVLYGKDEEELARCGECPLDPGGYFVIKGTEKVILIQEQLSKN 3122
            K DV I RMPIMLRSCCCVL+ KDE+ELAR GECPLDPGGYFVIKGTEKVILIQEQLSKN
Sbjct: 132  KNDVTIARMPIMLRSCCCVLFRKDEDELARLGECPLDPGGYFVIKGTEKVILIQEQLSKN 191

Query: 3121 RIIIDTDKKNCVQASVTSSTEATKSKTVIKMEKEKIYLYLNQFTSKVPIMMVMKAMGMES 2942
            RIIIDTDKK  + ASVTSSTEATKSKTV+ MEK K+YL LNQF   +PIM+VMKAM MES
Sbjct: 192  RIIIDTDKKGNINASVTSSTEATKSKTVVVMEKGKMYLQLNQFAKNIPIMIVMKAMRMES 251

Query: 2941 DQEVVQMIGRDPRYSELLLPSIEDCAKEAVYTQYQALEYLEQKVKKLPYSNALIEKEGRA 2762
            DQEVVQMIGRDPRYS LLL SIE+CA  +++TQ QALE+LE K+KKLPY+N    KEGRA
Sbjct: 252  DQEVVQMIGRDPRYSALLLQSIEECASLSIFTQQQALEFLEGKLKKLPYANMSTGKEGRA 311

Query: 2761 LGILRDIFLANIPVQQDNFRPKCIYVAVMLRRMMEAILNKDAMDDKDYAGNKRXXXXXXX 2582
            + ILRD+FLAN+ V ++NFRPKCIYVAVMLRRMMEAILNKDAMDDKDY GNKR       
Sbjct: 312  MSILRDVFLANVRVIKNNFRPKCIYVAVMLRRMMEAILNKDAMDDKDYVGNKRLELSGQL 371

Query: 2581 XXXXXXXXFKTMNDEARKTIDTILAKPSRSSRFDISQFIVKDSITVGLERTLSTGNWDVK 2402
                    FKTM  E +K  D +L+K SRSS+ D+S  +VKD IT GLER LSTGNWDVK
Sbjct: 372  ISLLFEDLFKTMISEVQKQADNVLSKRSRSSQLDLSMLLVKDIITQGLERALSTGNWDVK 431

Query: 2401 RFRMHRKGMTQVVARLSYIGTLGHMTKVSPQFEKSRKVSGPRALQPSQWGMLCPCDTPEG 2222
            RFRMHRKGMTQV+ARLS+IGTLGH+T++SPQFEKSRKVSGPRALQPSQWGMLCPCDTPEG
Sbjct: 432  RFRMHRKGMTQVLARLSFIGTLGHVTRISPQFEKSRKVSGPRALQPSQWGMLCPCDTPEG 491

Query: 2221 EACGLVKNLALMTHVTTDEDEAPLVSLCYSLGVEDLELLSGEELHMPNSYLIILNGLILG 2042
            EACGLVKNLALMTHVTTD++E PL++LCY LGVEDLELLSGEELH PNS+LII NGLILG
Sbjct: 492  EACGLVKNLALMTHVTTDQEEGPLIALCYCLGVEDLELLSGEELHTPNSFLIIFNGLILG 551

Query: 2041 KHRRPQWFANAMRKLRRAAKIGEFVSIFVNEKQRCVYIASDGGRVCRPLVIADKGVPRIK 1862
            KHRRPQ FAN MRKLRR  +IGEFVS+FVNEKQ CVYIASDGGRVCRPLVIADKG+ RIK
Sbjct: 552  KHRRPQRFANTMRKLRRIGRIGEFVSVFVNEKQCCVYIASDGGRVCRPLVIADKGISRIK 611

Query: 1861 EHHMKELRDGVRTFNSFLKDGLIEYLDVNEENNALIALYEENAKEGTTHIEIEPFTILGV 1682
            EHHMK L DG RTF+ FL++GL+EYLDVNEENNALIALYE++A   TTHIEIEPFTILGV
Sbjct: 612  EHHMKGLLDGARTFDDFLREGLVEYLDVNEENNALIALYEQDATPETTHIEIEPFTILGV 671

Query: 1681 CAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNELTRMDTLIYLLVYPQRPLLTTRTIEL 1502
            CAGLIP+PHHNQSPRNTYQCAMGKQAMGNIAYN+L RMDTL+YLLVYPQRPLLTTRTIEL
Sbjct: 672  CAGLIPFPHHNQSPRNTYQCAMGKQAMGNIAYNQLLRMDTLLYLLVYPQRPLLTTRTIEL 731

Query: 1501 VGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCIVMKKMAAISQKYENGTS 1322
             GYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCIVMKK +A++QKYENGTS
Sbjct: 732  TGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCIVMKKYSAVNQKYENGTS 791

Query: 1321 DRIIRPQR--------EGYEAERMQILDDDGLAAPGEIIRPHDIYINKESPTITRGPVTS 1166
            DRI+RP R        E  + ERMQILD+DG+AAPGEIIRP+D+YINKESP IT+G   +
Sbjct: 792  DRILRPPRKDDRNKKGENPDWERMQILDNDGIAAPGEIIRPNDVYINKESPIITKG---N 848

Query: 1165 PM--GLPDSAYKPSRQTYKGPEGETAVVDRVSLCSDKNSNLCIKFMIRHTRRPEVGDKFS 992
            P   GL DS YKPSRQT+KG EGE+ VVDRV+L SDKN NL IKFMIRHTRRPEVGDKFS
Sbjct: 849  PKLGGLKDSDYKPSRQTFKGAEGESCVVDRVTLSSDKNYNLSIKFMIRHTRRPEVGDKFS 908

Query: 991  SRHGQKGVCGTIVQQEDLPFSERGICPDLIMNPHGFPSRMTVGKMIELLGSKAGVSSGRF 812
            SRHGQKGVCGTIVQQED PFSE GICPDLIMNPHGFPSRMTVGKMIELLG KAGVS GRF
Sbjct: 909  SRHGQKGVCGTIVQQEDFPFSEHGICPDLIMNPHGFPSRMTVGKMIELLGGKAGVSCGRF 968

Query: 811  HYGSAFGEPSGHADRVEAISETLVKHGFSYSGKDFIYSGITGEPLQAYIFMGPIYYQKLK 632
            HYGSAFGEPSGHADRVEAISETLVKHGFSY+GKDF+YSGITG PLQAYIFMGPIYYQKLK
Sbjct: 969  HYGSAFGEPSGHADRVEAISETLVKHGFSYNGKDFLYSGITGCPLQAYIFMGPIYYQKLK 1028

Query: 631  HMVLDKMHARGSGPRVMITRQPTEGRSRNGGLRVGEMERDCLIAYGASMLIYERLMISSD 452
            HMVLDKMHARGSGPRVM+TRQPTEGR+RNGGLRVGEMERDCLIAYGASMLIYERLM+SSD
Sbjct: 1029 HMVLDKMHARGSGPRVMLTRQPTEGRARNGGLRVGEMERDCLIAYGASMLIYERLMLSSD 1088

Query: 451  PFEVQVCRKCGLLGYYNFKLKTANCSTCKNGDNISTMKLPYACKLLFQELQAMNIVPRLK 272
            PFEVQVCR CGLLGYYN+KLKT  CS+CKNGDNISTMKLPYACKLL QELQ+MNIVPRL+
Sbjct: 1089 PFEVQVCRACGLLGYYNYKLKTGICSSCKNGDNISTMKLPYACKLLIQELQSMNIVPRLR 1148

Query: 271  LTEA 260
            L ++
Sbjct: 1149 LADS 1152


>ref|XP_004141655.2| PREDICTED: DNA-directed RNA polymerase III subunit RPC2 [Cucumis
            sativus]
          Length = 1158

 Score = 1852 bits (4798), Expect = 0.0
 Identities = 917/1136 (80%), Positives = 1006/1136 (88%), Gaps = 2/1136 (0%)
 Frame = -2

Query: 3661 IDKQSLAAPVKSAVDKFQLLPEFLKVRGLVKQHLDSFNYFLRTQIKKIVRANDLITSRVD 3482
            IDKQ +  P+KSAVDKFQLLPEFLKVRGLVKQHLDSFNYF+ T+IKKIV+AND I S  D
Sbjct: 26   IDKQFIGLPIKSAVDKFQLLPEFLKVRGLVKQHLDSFNYFVNTEIKKIVKANDRIESSTD 85

Query: 3481 PSIYLRYKDVRIGEPSIIIDGVTEKLTPHKCRLADLTYAAPIYVNIEYITGSHGSKTTQM 3302
            PSIYLR+ DVRIGEPS+ ++ V+E + PH CRL+DLTYAAPI V+IEYI  SH  K  + 
Sbjct: 86   PSIYLRFLDVRIGEPSVTVNAVSETINPHMCRLSDLTYAAPILVDIEYIEESHAQKAPRE 145

Query: 3301 KRDVIIGRMPIMLRSCCCVLYGKDEEELARCGECPLDPGGYFVIKGTEKVILIQEQLSKN 3122
            K+DV+IGRMPIMLRS CCVL+GKDE ELAR GECPLDPGGYF+IKGTEKV+LIQEQLSKN
Sbjct: 146  KKDVVIGRMPIMLRSRCCVLHGKDEAELARLGECPLDPGGYFIIKGTEKVVLIQEQLSKN 205

Query: 3121 RIIIDTDKKNCVQASVTSSTEATKSKTVIKMEKEKIYLYLNQFTS-KVPIMMVMKAMGME 2945
            RIIIDTDKK  + ASVTSSTEATKSKTVIKME EKIYL LN FT+ K+PIM+V+KAMGME
Sbjct: 206  RIIIDTDKKGNINASVTSSTEATKSKTVIKMENEKIYLQLNIFTTPKIPIMVVLKAMGME 265

Query: 2944 SDQEVVQMIGRDPRYSELLLPSIEDCAKEAVYTQYQALEYLEQKVKKLPYSNALIEKEGR 2765
            S QEVVQM+GRDPRY  LLLPSIE+CAKE +YTQ QALEYLE KVKK  +++A  EKEGR
Sbjct: 266  SIQEVVQMVGRDPRYGALLLPSIEECAKEKIYTQEQALEYLETKVKKFQFASAPPEKEGR 325

Query: 2764 ALGILRDIFLANIPVQQDNFRPKCIYVAVMLRRMMEAILNKDAMDDKDYAGNKRXXXXXX 2585
            ALGILRD+FLAN+PV ++NF PKCIYVAVM+RRMM+AIL+KDAMDDKDY GNKR      
Sbjct: 326  ALGILRDVFLANVPVYKNNFHPKCIYVAVMMRRMMDAILSKDAMDDKDYVGNKRLELSGQ 385

Query: 2584 XXXXXXXXXFKTMNDEARKTIDTILAKPSRSSRFDISQFIVKDSITVGLERTLSTGNWDV 2405
                     FKTM  E +KTID +L K SRSSRFD SQ +  + I+ GLERTLSTGNWDV
Sbjct: 386  LISLLFEDLFKTMVSEVKKTIDKLLGKHSRSSRFDFSQHLNSNIISFGLERTLSTGNWDV 445

Query: 2404 KRFRMHRKGMTQVVARLSYIGTLGHMTKVSPQFEKSRKVSGPRALQPSQWGMLCPCDTPE 2225
            KRFRMHRKGM+QV+ARLS+I T+GH+T+VSPQFEKSRKVSGPRALQPSQWGMLCPCDTPE
Sbjct: 446  KRFRMHRKGMSQVLARLSFISTMGHVTRVSPQFEKSRKVSGPRALQPSQWGMLCPCDTPE 505

Query: 2224 GEACGLVKNLALMTHVTTDEDEAPLVSLCYSLGVEDLELLSGEELHMPNSYLIILNGLIL 2045
            GEACGLVKNLALMTHVTTD++E PL+SLCY LGVEDLELLS EELH PNS+L+I NG IL
Sbjct: 506  GEACGLVKNLALMTHVTTDQEEGPLISLCYCLGVEDLELLSAEELHTPNSFLVIFNGRIL 565

Query: 2044 GKHRRPQWFANAMRKLRRAAKIGEFVSIFVNEKQRCVYIASDGGRVCRPLVIADKGVPRI 1865
            GKHRRPQ+FA  MR LRRA KIGEFVS+FVNEKQ CVYIASDGGRVCRPLVIADKGV RI
Sbjct: 566  GKHRRPQYFATGMRMLRRAGKIGEFVSVFVNEKQHCVYIASDGGRVCRPLVIADKGVSRI 625

Query: 1864 KEHHMKELRDGVRTFNSFLKDGLIEYLDVNEENNALIALYEENAKEGTTHIEIEPFTILG 1685
            KE+HMKEL DGVRTF+ FL+DGLIEYLDVNEENNALIALYE  A   TTHIEIEPFTILG
Sbjct: 626  KEYHMKELSDGVRTFDDFLRDGLIEYLDVNEENNALIALYEGEATPETTHIEIEPFTILG 685

Query: 1684 VCAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNELTRMDTLIYLLVYPQRPLLTTRTIE 1505
            V AGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYN+L RMDTL+YLLVYPQRPLLTT+TIE
Sbjct: 686  VVAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNQLRRMDTLLYLLVYPQRPLLTTKTIE 745

Query: 1504 LVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCIVMKKMAAISQKYENGT 1325
            LVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCIV KK ++++QKYEN T
Sbjct: 746  LVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCIVFKKYSSVNQKYENNT 805

Query: 1324 SDRIIRPQREGYEAERMQILDDDGLAAPGEIIRPHDIYINKESPTITRGPVTSPM-GLPD 1148
            +DRI+RP R       MQILDDDGLAAPGEIIRP+DIY+NK+SP IT+G   SP+ G+PD
Sbjct: 806  ADRIVRPNRNEDFTGNMQILDDDGLAAPGEIIRPNDIYVNKQSPIITKG---SPLPGIPD 862

Query: 1147 SAYKPSRQTYKGPEGETAVVDRVSLCSDKNSNLCIKFMIRHTRRPEVGDKFSSRHGQKGV 968
            +AY+P RQ +KG EGE  VVDRV+L +DKN  LCIKF+IR TRRPE+GDKFSSRHGQKGV
Sbjct: 863  NAYRPCRQIFKGSEGEPTVVDRVALSTDKNDCLCIKFLIRQTRRPELGDKFSSRHGQKGV 922

Query: 967  CGTIVQQEDLPFSERGICPDLIMNPHGFPSRMTVGKMIELLGSKAGVSSGRFHYGSAFGE 788
            CGTIVQQED PFSERGICPDLIMNPHGFPSRMTVGKMIELLG KAGVS GRFHYGSAFGE
Sbjct: 923  CGTIVQQEDFPFSERGICPDLIMNPHGFPSRMTVGKMIELLGGKAGVSCGRFHYGSAFGE 982

Query: 787  PSGHADRVEAISETLVKHGFSYSGKDFIYSGITGEPLQAYIFMGPIYYQKLKHMVLDKMH 608
            PSGHAD+V+AISETL+K GFSY+GKDF+YSGITG PLQAYIFMGPIYYQKLKHMVLDKMH
Sbjct: 983  PSGHADKVDAISETLIKRGFSYNGKDFLYSGITGCPLQAYIFMGPIYYQKLKHMVLDKMH 1042

Query: 607  ARGSGPRVMITRQPTEGRSRNGGLRVGEMERDCLIAYGASMLIYERLMISSDPFEVQVCR 428
            ARGSGPRVM+TRQPTEGR+RNGGLRVGEMERDCLIAYGASMLIYERLMISSDPFEVQVCR
Sbjct: 1043 ARGSGPRVMLTRQPTEGRARNGGLRVGEMERDCLIAYGASMLIYERLMISSDPFEVQVCR 1102

Query: 427  KCGLLGYYNFKLKTANCSTCKNGDNISTMKLPYACKLLFQELQAMNIVPRLKLTEA 260
             CGLLGYYN KLKT  CS+CKNGDNISTMKLPYACKLL QELQ+MNIVPRLKL EA
Sbjct: 1103 VCGLLGYYNHKLKTGICSSCKNGDNISTMKLPYACKLLIQELQSMNIVPRLKLAEA 1158


>ref|XP_011003286.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC2 isoform X1
            [Populus euphratica]
          Length = 1151

 Score = 1850 bits (4792), Expect = 0.0
 Identities = 914/1136 (80%), Positives = 1002/1136 (88%), Gaps = 2/1136 (0%)
 Frame = -2

Query: 3661 IDKQS-LAAPVKSAVDKFQLLPEFLKVRGLVKQHLDSFNYFLRTQIKKIVRANDLITSRV 3485
            IDKQ   AAPVKSAVDKFQLLPEFLKVRGLVKQHLDSFNYF+   IKKIVRAND I S V
Sbjct: 19   IDKQKHAAAPVKSAVDKFQLLPEFLKVRGLVKQHLDSFNYFINIGIKKIVRANDRIVSTV 78

Query: 3484 DPSIYLRYKDVRIGEPSIIIDGVTEKLTPHKCRLADLTYAAPIYVNIEYITGSHGSKTTQ 3305
            DPS+YLR+ DV+IG+PS+++D ++E++TPH CRL+D TYAAPI+VNIEYI+GSHG K   
Sbjct: 79   DPSLYLRFTDVKIGKPSMVVDAISEQITPHMCRLSDTTYAAPIWVNIEYISGSHGRKEKM 138

Query: 3304 MKRDVIIGRMPIMLRSCCCVLYGKDEEELARCGECPLDPGGYFVIKGTEKVILIQEQLSK 3125
            +K DV+IGRMPIMLRSCCCVL GK+E ELAR GECPLDPGGYFV+KGTEKVILIQEQLSK
Sbjct: 139  IKNDVVIGRMPIMLRSCCCVLSGKNEAELARLGECPLDPGGYFVVKGTEKVILIQEQLSK 198

Query: 3124 NRIIIDTDKKNCVQASVTSSTEATKSKTVIKMEKEKIYLYLNQFTSKVPIMMVMKAMGME 2945
            NRIIID DKK  + ASVTSSTEATKSKTVI MEKEK+YL LNQF  K+PIM+VMKAMGME
Sbjct: 199  NRIIIDNDKKGNINASVTSSTEATKSKTVILMEKEKMYLCLNQFAKKIPIMVVMKAMGME 258

Query: 2944 SDQEVVQMIGRDPRYSELLLPSIEDCAKEAVYTQYQALEYLEQKVKKLPYSNALIEK-EG 2768
            SDQEVVQM+GRDPRYS LLLPSIE+CA   VYT+ QALEYLE  VK+  YS++  EK E 
Sbjct: 259  SDQEVVQMVGRDPRYSALLLPSIEECASHGVYTREQALEYLEAMVKRSTYSSSSTEKQEN 318

Query: 2767 RALGILRDIFLANIPVQQDNFRPKCIYVAVMLRRMMEAILNKDAMDDKDYAGNKRXXXXX 2588
            RAL ILRD+F+AN+PV+++NFRPKCIYVAVMLRRMMEA+LNKDAMDDKDY GNKR     
Sbjct: 319  RALAILRDVFIANVPVRKNNFRPKCIYVAVMLRRMMEALLNKDAMDDKDYVGNKRLELSG 378

Query: 2587 XXXXXXXXXXFKTMNDEARKTIDTILAKPSRSSRFDISQFIVKDSITVGLERTLSTGNWD 2408
                      FKTM  E +K  D +L K +RSSRFD SQ+IV+DSIT GLER LSTGNWD
Sbjct: 379  QLISLLFEDLFKTMITEVQKIADALLVKQNRSSRFDFSQYIVRDSITNGLERALSTGNWD 438

Query: 2407 VKRFRMHRKGMTQVVARLSYIGTLGHMTKVSPQFEKSRKVSGPRALQPSQWGMLCPCDTP 2228
            VKRFRM+RKG+TQV+ RLSY+ +LGHMT++SPQFEKSRKVSGPRALQPSQWGMLCPCDTP
Sbjct: 439  VKRFRMNRKGVTQVLVRLSYMASLGHMTRISPQFEKSRKVSGPRALQPSQWGMLCPCDTP 498

Query: 2227 EGEACGLVKNLALMTHVTTDEDEAPLVSLCYSLGVEDLELLSGEELHMPNSYLIILNGLI 2048
            EGEACGLVKNLALMTHVTTDE+E+PL+SLC  LGVEDLELLSGEELH PNS+L+I NGLI
Sbjct: 499  EGEACGLVKNLALMTHVTTDEEESPLISLCKCLGVEDLELLSGEELHTPNSFLVIFNGLI 558

Query: 2047 LGKHRRPQWFANAMRKLRRAAKIGEFVSIFVNEKQRCVYIASDGGRVCRPLVIADKGVPR 1868
            LGKHRRP  FANAMRKLRRA KIGEFVS+FVNEKQR VYIASDGGRVCRPLVIADKGV R
Sbjct: 559  LGKHRRPHQFANAMRKLRRAGKIGEFVSVFVNEKQRAVYIASDGGRVCRPLVIADKGVSR 618

Query: 1867 IKEHHMKELRDGVRTFNSFLKDGLIEYLDVNEENNALIALYEENAKEGTTHIEIEPFTIL 1688
            IKEHHM+EL DG RTF+ FL +GLIEYLDVNEENNALIALYE  A   TTHIEIEPFTIL
Sbjct: 619  IKEHHMRELMDGARTFDDFLHEGLIEYLDVNEENNALIALYEWEATPETTHIEIEPFTIL 678

Query: 1687 GVCAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNELTRMDTLIYLLVYPQRPLLTTRTI 1508
            GV AGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYN+L RMD+L+YLLVYPQRPLLTTRTI
Sbjct: 679  GVVAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNQLGRMDSLLYLLVYPQRPLLTTRTI 738

Query: 1507 ELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCIVMKKMAAISQKYENG 1328
            ELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNK+SLDRGFGRCIV+KK    +QKYENG
Sbjct: 739  ELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKASLDRGFGRCIVLKKYTCTNQKYENG 798

Query: 1327 TSDRIIRPQREGYEAERMQILDDDGLAAPGEIIRPHDIYINKESPTITRGPVTSPMGLPD 1148
             SDRI+RP++     ER ++LDDDGLAAPGEIIR  DIYINKESP  TRGP+ S   L D
Sbjct: 799  ASDRILRPRK---NEERERVLDDDGLAAPGEIIRHGDIYINKESPIETRGPLKSAAALAD 855

Query: 1147 SAYKPSRQTYKGPEGETAVVDRVSLCSDKNSNLCIKFMIRHTRRPEVGDKFSSRHGQKGV 968
              Y+P  Q +KG EGE+ VVDRV+LCSDKN+NLCIK+ IRHTRRPEVGDKFSSRHGQKGV
Sbjct: 856  VKYRPCAQIFKGTEGESCVVDRVALCSDKNNNLCIKYKIRHTRRPEVGDKFSSRHGQKGV 915

Query: 967  CGTIVQQEDLPFSERGICPDLIMNPHGFPSRMTVGKMIELLGSKAGVSSGRFHYGSAFGE 788
            CGTI+QQED PFSERGICPDLIMNPHGFPSRMTVGKMIELLG KAGVS GRFHYGSAFGE
Sbjct: 916  CGTIIQQEDFPFSERGICPDLIMNPHGFPSRMTVGKMIELLGGKAGVSCGRFHYGSAFGE 975

Query: 787  PSGHADRVEAISETLVKHGFSYSGKDFIYSGITGEPLQAYIFMGPIYYQKLKHMVLDKMH 608
            PSGHADRVEAISETLVKHGFSY+GKDFIYSGITG PLQAYIFMGPIYYQKLKHMVLDKMH
Sbjct: 976  PSGHADRVEAISETLVKHGFSYNGKDFIYSGITGCPLQAYIFMGPIYYQKLKHMVLDKMH 1035

Query: 607  ARGSGPRVMITRQPTEGRSRNGGLRVGEMERDCLIAYGASMLIYERLMISSDPFEVQVCR 428
            ARGSGPRVM+TRQPT+GR+RNGGLRVGEME+DCL+AYG SML+YERLM+SSD FE QVCR
Sbjct: 1036 ARGSGPRVMLTRQPTDGRARNGGLRVGEMEKDCLVAYGTSMLLYERLMVSSDQFEAQVCR 1095

Query: 427  KCGLLGYYNFKLKTANCSTCKNGDNISTMKLPYACKLLFQELQAMNIVPRLKLTEA 260
             CGLLGYYN KLK A C+TCKNGD +STMKLPYACKLL QELQ+MNIVPRL+L EA
Sbjct: 1096 ACGLLGYYNQKLKAAMCTTCKNGDKVSTMKLPYACKLLIQELQSMNIVPRLRLAEA 1151


>ref|XP_008462447.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC2 [Cucumis
            melo]
          Length = 1158

 Score = 1848 bits (4787), Expect = 0.0
 Identities = 914/1136 (80%), Positives = 1005/1136 (88%), Gaps = 2/1136 (0%)
 Frame = -2

Query: 3661 IDKQSLAAPVKSAVDKFQLLPEFLKVRGLVKQHLDSFNYFLRTQIKKIVRANDLITSRVD 3482
            IDKQ +  P+KSAVDKFQLLPEFLKVRGLVKQHLDSFNYF+ T+IKKIV+AND I S  D
Sbjct: 26   IDKQFIGLPIKSAVDKFQLLPEFLKVRGLVKQHLDSFNYFVNTEIKKIVKANDRIESSTD 85

Query: 3481 PSIYLRYKDVRIGEPSIIIDGVTEKLTPHKCRLADLTYAAPIYVNIEYITGSHGSKTTQM 3302
            PSIYLR+ DVRIGEPS+ ++ V+E + PH CRL+DLTYAAPI V+IEYI  SH  K  + 
Sbjct: 86   PSIYLRFLDVRIGEPSVTVNAVSETINPHMCRLSDLTYAAPILVDIEYIEESHAQKAPRE 145

Query: 3301 KRDVIIGRMPIMLRSCCCVLYGKDEEELARCGECPLDPGGYFVIKGTEKVILIQEQLSKN 3122
            K+DV+IGRMPIMLRS CCVL+GKDE ELAR GECPLDPGGYF+IKGTEKV+LIQEQLSKN
Sbjct: 146  KKDVVIGRMPIMLRSRCCVLHGKDEAELARLGECPLDPGGYFIIKGTEKVVLIQEQLSKN 205

Query: 3121 RIIIDTDKKNCVQASVTSSTEATKSKTVIKMEKEKIYLYLNQFTS-KVPIMMVMKAMGME 2945
            RIIIDTDKK  + ASVTSSTEATKSKTVIKME EKIYL LN FT+ K+PIM+V+KAMGME
Sbjct: 206  RIIIDTDKKGNINASVTSSTEATKSKTVIKMENEKIYLQLNIFTTPKIPIMVVLKAMGME 265

Query: 2944 SDQEVVQMIGRDPRYSELLLPSIEDCAKEAVYTQYQALEYLEQKVKKLPYSNALIEKEGR 2765
            S QEVVQM+GRDPRY  LLLPSIE+CAKE +YTQ QALEYLE KVKK  +++A  EKEGR
Sbjct: 266  SVQEVVQMVGRDPRYGALLLPSIEECAKEKIYTQEQALEYLETKVKKFQFASAPPEKEGR 325

Query: 2764 ALGILRDIFLANIPVQQDNFRPKCIYVAVMLRRMMEAILNKDAMDDKDYAGNKRXXXXXX 2585
            ALGILRD+FLAN+PV ++NF PKCIYVAVM+RRMM+AIL+KDAMDDKDY GNKR      
Sbjct: 326  ALGILRDVFLANVPVYKNNFHPKCIYVAVMMRRMMDAILSKDAMDDKDYVGNKRLELSGQ 385

Query: 2584 XXXXXXXXXFKTMNDEARKTIDTILAKPSRSSRFDISQFIVKDSITVGLERTLSTGNWDV 2405
                     FKTM  E +KTID +L K SRSSRFD SQ +  + I+ GLERTLSTGNWDV
Sbjct: 386  LISLLFEDLFKTMVSEVKKTIDKLLGKHSRSSRFDFSQHLNSNIISFGLERTLSTGNWDV 445

Query: 2404 KRFRMHRKGMTQVVARLSYIGTLGHMTKVSPQFEKSRKVSGPRALQPSQWGMLCPCDTPE 2225
            KRFRMHRKGM+QV+ARLS+I T+GH+T+VSPQFEKSRKVSGPRALQPSQWGMLCPCDTPE
Sbjct: 446  KRFRMHRKGMSQVLARLSFISTMGHVTRVSPQFEKSRKVSGPRALQPSQWGMLCPCDTPE 505

Query: 2224 GEACGLVKNLALMTHVTTDEDEAPLVSLCYSLGVEDLELLSGEELHMPNSYLIILNGLIL 2045
            GEACGLVKNLALMTHVTTD++E PL+SLCY LGVEDLELLS EELH PNS+L+I NG IL
Sbjct: 506  GEACGLVKNLALMTHVTTDQEEGPLISLCYCLGVEDLELLSAEELHTPNSFLVIFNGRIL 565

Query: 2044 GKHRRPQWFANAMRKLRRAAKIGEFVSIFVNEKQRCVYIASDGGRVCRPLVIADKGVPRI 1865
            GKHRRPQ+FA  MR LRRA KIGEFVS+FVNEKQ CVYIASDGGRVCRPLVIADKGV RI
Sbjct: 566  GKHRRPQYFATGMRMLRRAGKIGEFVSVFVNEKQHCVYIASDGGRVCRPLVIADKGVSRI 625

Query: 1864 KEHHMKELRDGVRTFNSFLKDGLIEYLDVNEENNALIALYEENAKEGTTHIEIEPFTILG 1685
            +E+HMKEL DGVRTF+ FL+DGLIEYLDVNEENNALIALYE  A   TTHIEIEP TILG
Sbjct: 626  REYHMKELSDGVRTFDDFLRDGLIEYLDVNEENNALIALYEGEATPETTHIEIEPLTILG 685

Query: 1684 VCAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNELTRMDTLIYLLVYPQRPLLTTRTIE 1505
            V AGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYN+L RMDTL+YLLVYPQRPLLTT+TIE
Sbjct: 686  VVAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNQLRRMDTLLYLLVYPQRPLLTTKTIE 745

Query: 1504 LVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCIVMKKMAAISQKYENGT 1325
            LVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCIV KK ++++QKYEN T
Sbjct: 746  LVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCIVFKKYSSVNQKYENNT 805

Query: 1324 SDRIIRPQREGYEAERMQILDDDGLAAPGEIIRPHDIYINKESPTITRGPVTSPM-GLPD 1148
            +DRI+RP R       MQILDDDGLAAPGEIIRP+D+Y+NK+SP IT+G   SP+ G+PD
Sbjct: 806  ADRIVRPNRNEDFTGNMQILDDDGLAAPGEIIRPNDVYVNKQSPIITKG---SPLPGIPD 862

Query: 1147 SAYKPSRQTYKGPEGETAVVDRVSLCSDKNSNLCIKFMIRHTRRPEVGDKFSSRHGQKGV 968
            SAY+P RQ +KG EGE  VVDRV+L +DKN  LCIKF+IR TRRPE+GDKFSSRHGQKGV
Sbjct: 863  SAYRPCRQIFKGSEGEPTVVDRVALSTDKNDCLCIKFLIRQTRRPELGDKFSSRHGQKGV 922

Query: 967  CGTIVQQEDLPFSERGICPDLIMNPHGFPSRMTVGKMIELLGSKAGVSSGRFHYGSAFGE 788
            CGTIVQQED PFSERGICPDLIMNPHGFPSRMTVGKMIELLG KAGVS GRFHYGSAFGE
Sbjct: 923  CGTIVQQEDFPFSERGICPDLIMNPHGFPSRMTVGKMIELLGGKAGVSCGRFHYGSAFGE 982

Query: 787  PSGHADRVEAISETLVKHGFSYSGKDFIYSGITGEPLQAYIFMGPIYYQKLKHMVLDKMH 608
            PSGHAD+V+AISETL++ GFSY+GKDF+YSGITG PLQAYIFMGPIYYQKLKHMVLDKMH
Sbjct: 983  PSGHADKVDAISETLIERGFSYNGKDFLYSGITGCPLQAYIFMGPIYYQKLKHMVLDKMH 1042

Query: 607  ARGSGPRVMITRQPTEGRSRNGGLRVGEMERDCLIAYGASMLIYERLMISSDPFEVQVCR 428
            ARGSGPRVM+TRQPTEGR+RNGGLRVGEMERDCLIAYGASMLIYERLMISSDPFEVQVCR
Sbjct: 1043 ARGSGPRVMLTRQPTEGRARNGGLRVGEMERDCLIAYGASMLIYERLMISSDPFEVQVCR 1102

Query: 427  KCGLLGYYNFKLKTANCSTCKNGDNISTMKLPYACKLLFQELQAMNIVPRLKLTEA 260
             CGLLGYYN KLKT  CS+CKNGDNISTMKLPYACKLL QELQ+MNIVPRLKL EA
Sbjct: 1103 VCGLLGYYNHKLKTGICSSCKNGDNISTMKLPYACKLLIQELQSMNIVPRLKLAEA 1158