BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Forsythia21_contig00009913
         (1899 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_009778087.1| PREDICTED: tRNA pseudouridine synthase A, mi...   670   0.0  
ref|XP_009589249.1| PREDICTED: tRNA pseudouridine synthase A, mi...   666   0.0  
ref|XP_007010013.1| Pseudouridine synthase [Theobroma cacao] gi|...   649   0.0  
ref|XP_003519139.1| PREDICTED: tRNA pseudouridine synthase A, mi...   647   0.0  
gb|KHN42806.1| tRNA pseudouridine synthase 1 [Glycine soja]           645   0.0  
ref|XP_007154900.1| hypothetical protein PHAVU_003G157400g [Phas...   643   0.0  
ref|XP_010064573.1| PREDICTED: tRNA pseudouridine synthase A, mi...   642   0.0  
ref|XP_008452911.1| PREDICTED: tRNA pseudouridine synthase A, mi...   641   0.0  
ref|XP_006575306.1| PREDICTED: tRNA pseudouridine synthase A, mi...   640   e-180
ref|XP_002307759.2| hypothetical protein POPTR_0005s26830g [Popu...   640   e-180
ref|XP_011034929.1| PREDICTED: tRNA pseudouridine synthase A, mi...   638   e-180
ref|XP_010266077.1| PREDICTED: tRNA pseudouridine synthase A, mi...   637   e-180
ref|XP_011003107.1| PREDICTED: LOW QUALITY PROTEIN: tRNA pseudou...   637   e-180
ref|XP_004145528.1| PREDICTED: tRNA pseudouridine synthase A, mi...   637   e-180
ref|XP_007154901.1| hypothetical protein PHAVU_003G157400g [Phas...   636   e-179
ref|XP_002510619.1| pseudouridylate synthase, putative [Ricinus ...   635   e-179
ref|XP_008221186.1| PREDICTED: tRNA pseudouridine synthase A, mi...   633   e-178
ref|XP_006342092.1| PREDICTED: tRNA pseudouridine synthase A, mi...   630   e-178
ref|XP_006435279.1| hypothetical protein CICLE_v10000838mg [Citr...   630   e-177
ref|XP_010266076.1| PREDICTED: tRNA pseudouridine synthase A, mi...   629   e-177

>ref|XP_009778087.1| PREDICTED: tRNA pseudouridine synthase A, mitochondrial [Nicotiana
            sylvestris]
          Length = 596

 Score =  670 bits (1728), Expect = 0.0
 Identities = 352/516 (68%), Positives = 400/516 (77%), Gaps = 9/516 (1%)
 Frame = -1

Query: 1674 KKLKMSTTTSDDDENYDKAPAAADADGTILPRKPRYKRRKIAIFFAYCGVGYQGMQKNPG 1495
            KK KMSTTTSDD+E    A AA   DG    RKPRYKRRKIAIFFAYCGVGYQGMQKNPG
Sbjct: 17   KKQKMSTTTSDDEE---AATAAVAGDGPAPERKPRYKRRKIAIFFAYCGVGYQGMQKNPG 73

Query: 1494 AKTIEGDLEEALYHSGAVPEQDRGLPKRFDFARSARTDKGVSAVGQVVSGRFYVDPPGLI 1315
            AKTIEGDLEEALY +G VPE D+  P+R+D+ARSARTDKGVSAVGQVVSGRFYVDPPG I
Sbjct: 74   AKTIEGDLEEALYQAGGVPEHDKCQPRRYDWARSARTDKGVSAVGQVVSGRFYVDPPGFI 133

Query: 1314 ERLNSNLSPQIRVFGFKRVTGSFNAKKFCDRRRYVYLIPVFALDPSCHRDRESVLASVGS 1135
            +RLNS LSPQIR+FGFKRVT +FNAKKFCDRRRYVY +PVFALDPS HRDRE+VLASVGS
Sbjct: 134  DRLNSILSPQIRIFGFKRVTNAFNAKKFCDRRRYVYFVPVFALDPSSHRDRETVLASVGS 193

Query: 1134 ENELVKCLECSERGRKVFGVMGKRNLHSKSDSEAVSVD-SSITLNTSSLLELENDEKIVV 958
              ELVKCLECSERGRKVFGVMGKR     + S  V  +  ++  N  + + L+N E  V 
Sbjct: 194  GKELVKCLECSERGRKVFGVMGKRVYDPITKSVIVVAEPGNMPNNGDAQVTLQNIESNVN 253

Query: 957  KTSEXXXXXXXXXXNKFNTEPVKDLGDGAAQSDKIEEDKVDCGNVDGNLKP----EKRSE 790
              +               TE    + +GA+ S+K EE K +    D N K      + S 
Sbjct: 254  VNANDVI-----------TESNMVIENGASLSEKGEETKEEVEKGDENAKAIEEQVEESV 302

Query: 789  FSYGEQERERFNRILKFYEGTHNFHNFTTRTKAEDPSAKRYIISFNANTTINVEGIEFVK 610
            FSYGE+E+ERFNRILK+YEGTHNFHNFTTRTKA+DP+AKRYIISF ANT +NVEGIEFVK
Sbjct: 303  FSYGEKEKERFNRILKYYEGTHNFHNFTTRTKADDPAAKRYIISFTANTIVNVEGIEFVK 362

Query: 609  CEVIGQSFMLHQIRKLIGLAVAIMRNIAPESLIEAAFEQNVNINVPMAPEVGLYLDECFF 430
            CEV+GQSFMLHQIRK+IGLAVAIMRN APESLI+ AF ++VNINVPMAPEVGLYLDECFF
Sbjct: 363  CEVVGQSFMLHQIRKMIGLAVAIMRNCAPESLIQTAFRRDVNINVPMAPEVGLYLDECFF 422

Query: 429  SSYNKKWKDSHEELSMKAYAEEAEDFKMKYIYSHIASTEHKDGVVALWLHSLNYRNYSDL 250
            +SYN KWKD+HEE+S+KAY E AE+FKMKYIYSHIASTEHKDG +ALWLHSLNYRNY DL
Sbjct: 423  TSYNSKWKDTHEEVSLKAYTEAAEEFKMKYIYSHIASTEHKDGTMALWLHSLNYRNYPDL 482

Query: 249  RGL----NSGQSTETKCDEFVDNCQNTDVKHNEAVD 154
            RG+    ++G S  +K  E V       VK+ E+ D
Sbjct: 483  RGVDNDNSAGASDGSKAIEAVVEAGIGAVKNGESTD 518


>ref|XP_009589249.1| PREDICTED: tRNA pseudouridine synthase A, mitochondrial-like
            [Nicotiana tomentosiformis]
          Length = 596

 Score =  666 bits (1719), Expect = 0.0
 Identities = 342/488 (70%), Positives = 387/488 (79%), Gaps = 5/488 (1%)
 Frame = -1

Query: 1674 KKLKMSTTTSDDDENYDKAPAAADADGTILPRKPRYKRRKIAIFFAYCGVGYQGMQKNPG 1495
            KK KMSTTTSDD+E    A AA   DG    RKPRYKRRKIA+FFAYCGVGYQGMQKNPG
Sbjct: 17   KKQKMSTTTSDDEE---AATAAVAGDGPAPERKPRYKRRKIALFFAYCGVGYQGMQKNPG 73

Query: 1494 AKTIEGDLEEALYHSGAVPEQDRGLPKRFDFARSARTDKGVSAVGQVVSGRFYVDPPGLI 1315
            AKTIEGDLEEALY +G VP+ D+  P+R+D+ARSARTDKGVSAVGQVVSGRFYVDPPG I
Sbjct: 74   AKTIEGDLEEALYQAGGVPDHDKCQPRRYDWARSARTDKGVSAVGQVVSGRFYVDPPGFI 133

Query: 1314 ERLNSNLSPQIRVFGFKRVTGSFNAKKFCDRRRYVYLIPVFALDPSCHRDRESVLASVGS 1135
            +RLNS LSPQIR+FGFKRVT +FNAKKFCDRRRYVY +PVFALDPS HRDRE+VLASVGS
Sbjct: 134  DRLNSILSPQIRIFGFKRVTNAFNAKKFCDRRRYVYFVPVFALDPSSHRDRETVLASVGS 193

Query: 1134 ENELVKCLECSERGRKVFGVMGKRNLHSKSDSEAVSVDSSITLNTSSL-LELENDEKIVV 958
              ELVKCLECSERGRKVFGVMGKR     + S  V  +     NT    L L+N E  V 
Sbjct: 194  GKELVKCLECSERGRKVFGVMGKRVFDPITKSVIVVAEPCNMPNTGDAQLTLQNTESNVN 253

Query: 957  KTSEXXXXXXXXXXNKFNTEPVKDLGDGAAQSDKIEEDKVDCGNVDGNLKPEKR----SE 790
              +               TE    + +GA+ S+K+EE K +    D N K  +     S 
Sbjct: 254  VNANDVI-----------TESNMVIENGASVSEKVEETKEEVEKGDENAKTVEEQVEESV 302

Query: 789  FSYGEQERERFNRILKFYEGTHNFHNFTTRTKAEDPSAKRYIISFNANTTINVEGIEFVK 610
            F YGE+E+ERFNRILK+YEGTHNFHNFTTRTKA+DP+AKRYIISF ANT +NVE IEFVK
Sbjct: 303  FCYGEKEKERFNRILKYYEGTHNFHNFTTRTKADDPAAKRYIISFTANTIVNVESIEFVK 362

Query: 609  CEVIGQSFMLHQIRKLIGLAVAIMRNIAPESLIEAAFEQNVNINVPMAPEVGLYLDECFF 430
            CEV+GQSFMLHQIRK+IGLAVAIMRN APESLI+ AF ++VNINVPMAPEVGLYLDECFF
Sbjct: 363  CEVVGQSFMLHQIRKMIGLAVAIMRNCAPESLIQTAFRRDVNINVPMAPEVGLYLDECFF 422

Query: 429  SSYNKKWKDSHEELSMKAYAEEAEDFKMKYIYSHIASTEHKDGVVALWLHSLNYRNYSDL 250
            +SYN KWKD+HEE+S+KAY+E AE+FKMKYIYSHIASTEHKDG +ALWLHSLNYRNY DL
Sbjct: 423  TSYNSKWKDTHEEVSLKAYSEAAEEFKMKYIYSHIASTEHKDGTMALWLHSLNYRNYPDL 482

Query: 249  RGLNSGQS 226
            R +++G S
Sbjct: 483  RAVDNGNS 490


>ref|XP_007010013.1| Pseudouridine synthase [Theobroma cacao] gi|508726926|gb|EOY18823.1|
            Pseudouridine synthase [Theobroma cacao]
          Length = 507

 Score =  649 bits (1675), Expect = 0.0
 Identities = 334/501 (66%), Positives = 389/501 (77%)
 Frame = -1

Query: 1674 KKLKMSTTTSDDDENYDKAPAAADADGTILPRKPRYKRRKIAIFFAYCGVGYQGMQKNPG 1495
            K+LKMSTTT+ DDE       A+  +GT   +K RYKRRKIAIFFAYCGVGYQGMQKNPG
Sbjct: 28   KRLKMSTTTTSDDEE-----TASATNGT---KKQRYKRRKIAIFFAYCGVGYQGMQKNPG 79

Query: 1494 AKTIEGDLEEALYHSGAVPEQDRGLPKRFDFARSARTDKGVSAVGQVVSGRFYVDPPGLI 1315
            AKTIEGDLEEAL+HSGAVPEQDRG PKR+D+ARSARTDKGVSAVGQVVSGRFY+DPPGL+
Sbjct: 80   AKTIEGDLEEALFHSGAVPEQDRGNPKRYDWARSARTDKGVSAVGQVVSGRFYIDPPGLV 139

Query: 1314 ERLNSNLSPQIRVFGFKRVTGSFNAKKFCDRRRYVYLIPVFALDPSCHRDRESVLASVGS 1135
            ERLN  L  QIR+FG+KRVT SFN+KKFCDRRRYVYLIPVFALDPSCHRDRESVLAS+GS
Sbjct: 140  ERLNRILPAQIRIFGYKRVTASFNSKKFCDRRRYVYLIPVFALDPSCHRDRESVLASLGS 199

Query: 1134 ENELVKCLECSERGRKVFGVMGKRNLHSKSDSEAVSVDSSITLNTSSLLELENDEKIVVK 955
             NELVKCLECSERGRKV GVMGKR+  +KS      V S ++ N      +  +  +   
Sbjct: 200  GNELVKCLECSERGRKVAGVMGKRSFEAKS----TIVHSDVSSNNGESGNVIKEHNL--- 252

Query: 954  TSEXXXXXXXXXXNKFNTEPVKDLGDGAAQSDKIEEDKVDCGNVDGNLKPEKRSEFSYGE 775
                             T  ++++ D + Q++  E DKV+   +     P +   F YGE
Sbjct: 253  -----------------TSELEEVTDSSVQNEFTEVDKVNVEKI-----PLEERRFCYGE 290

Query: 774  QERERFNRILKFYEGTHNFHNFTTRTKAEDPSAKRYIISFNANTTINVEGIEFVKCEVIG 595
            +E+  FNRILK Y G+HNFHNFTTRTKAEDPSA+RYI+SF+ANT +NVEGI+FVKCEV+G
Sbjct: 291  EEKGLFNRILKHYVGSHNFHNFTTRTKAEDPSARRYIVSFHANTVVNVEGIDFVKCEVVG 350

Query: 594  QSFMLHQIRKLIGLAVAIMRNIAPESLIEAAFEQNVNINVPMAPEVGLYLDECFFSSYNK 415
            QSFMLHQIRK+IG+AVA+MRN APESLIE A  ++V+INVP APEVGLYLDEC F+SYN+
Sbjct: 351  QSFMLHQIRKMIGMAVAVMRNCAPESLIETALRKDVSINVPTAPEVGLYLDECLFASYNQ 410

Query: 414  KWKDSHEELSMKAYAEEAEDFKMKYIYSHIASTEHKDGVVALWLHSLNYRNYSDLRGLNS 235
            KWKDSHEELSMKAY EEAE+FKMK+IYSHIASTE ++GVVALWLHSLN+RNY DLRG N 
Sbjct: 411  KWKDSHEELSMKAYEEEAEEFKMKFIYSHIASTEREEGVVALWLHSLNHRNYPDLRGCNV 470

Query: 234  GQSTETKCDEFVDNCQNTDVK 172
             +  E    +  DN  NTD K
Sbjct: 471  -EMIEGMSLKVDDNTDNTDAK 490


>ref|XP_003519139.1| PREDICTED: tRNA pseudouridine synthase A, mitochondrial-like isoform
            X1 [Glycine max]
          Length = 548

 Score =  647 bits (1669), Expect = 0.0
 Identities = 341/514 (66%), Positives = 394/514 (76%), Gaps = 13/514 (2%)
 Frame = -1

Query: 1674 KKLKMSTTTSDDDENYDKAPAAADADGTILPRKPRYKRRKIAIFFAYCGVGYQGMQKNPG 1495
            KKLKMSTTTSDD+E            GT    K RYKRRK+AIFFAYCGVGYQGMQKNPG
Sbjct: 27   KKLKMSTTTSDDEET-----------GT----KKRYKRRKVAIFFAYCGVGYQGMQKNPG 71

Query: 1494 AKTIEGDLEEALYHSGAVPEQDRGLPKRFDFARSARTDKGVSAVGQVVSGRFYVDPPGLI 1315
            AKTIEGDLEEALY SGAVPEQDRG+PKR+D+ARSARTDKGVSAVGQVVSGRFY+DPPGL+
Sbjct: 72   AKTIEGDLEEALYVSGAVPEQDRGVPKRYDWARSARTDKGVSAVGQVVSGRFYIDPPGLV 131

Query: 1314 ERLNSNLSPQIRVFGFKRVTGSFNAKKFCDRRRYVYLIPVFALDPSCHRDRESVLASVGS 1135
            +RLNSNL  QIR+FG+KRVT SFNAKKFCDRRRYVYLIPVFALDPSCHRDRE+V+AS+GS
Sbjct: 132  DRLNSNLPSQIRIFGYKRVTASFNAKKFCDRRRYVYLIPVFALDPSCHRDRETVMASLGS 191

Query: 1134 ENELVKCLECSERGRKVFGVMGKRNLHSKSDSEAVSVDSSITLNTSS--------LLELE 979
             NELVKCLECSERGRKV G++G R      + EAV V++ I+ N  S         L   
Sbjct: 192  GNELVKCLECSERGRKVVGLVGNRK--QNLELEAVDVEAGISSNRDSGVTEDVEVSLSKG 249

Query: 978  NDEKIVVKTSEXXXXXXXXXXNKFNTEPVKD-----LGDGAAQSDKIEEDKVDCGNVDGN 814
            +D  +  ++                  PV++      G+    SD +EE+K     V+G 
Sbjct: 250  DDNHLNEESGNDNKGGMNCKTGLETVIPVQEEGTPLNGESVNNSDILEEEK-----VNGE 304

Query: 813  LKPEKRSEFSYGEQERERFNRILKFYEGTHNFHNFTTRTKAEDPSAKRYIISFNANTTIN 634
             KP   S F YGE+ERERFN+ILK + GTHNFHNFTTRTKAEDP+A+RYIISFNANTT+ 
Sbjct: 305  DKPTNGSRFCYGEKERERFNKILKCFVGTHNFHNFTTRTKAEDPAARRYIISFNANTTLV 364

Query: 633  VEGIEFVKCEVIGQSFMLHQIRKLIGLAVAIMRNIAPESLIEAAFEQNVNINVPMAPEVG 454
            VEG+EFVKCEV+GQSFMLHQIRK+IGLAVAIMRN APESLI+ A +Q+VNINVP APEVG
Sbjct: 365  VEGVEFVKCEVVGQSFMLHQIRKMIGLAVAIMRNCAPESLIDEALQQDVNINVPTAPEVG 424

Query: 453  LYLDECFFSSYNKKWKDSHEELSMKAYAEEAEDFKMKYIYSHIASTEHKDGVVALWLHSL 274
            LYLDECFF+SYN+KWKD HEELSMKAY +EA++FKMKYIYSHIASTE K+G VALWLHSL
Sbjct: 425  LYLDECFFTSYNQKWKD-HEELSMKAYEKEADEFKMKYIYSHIASTEQKEGTVALWLHSL 483

Query: 273  NYRNYSDLRGLNSGQSTETKCDEFVDNCQNTDVK 172
            N+RNY DLR +N         +E + N ++ D K
Sbjct: 484  NHRNYPDLRVIN---------EEAIPNNKSADPK 508


>gb|KHN42806.1| tRNA pseudouridine synthase 1 [Glycine soja]
          Length = 552

 Score =  645 bits (1664), Expect = 0.0
 Identities = 340/514 (66%), Positives = 393/514 (76%), Gaps = 13/514 (2%)
 Frame = -1

Query: 1674 KKLKMSTTTSDDDENYDKAPAAADADGTILPRKPRYKRRKIAIFFAYCGVGYQGMQKNPG 1495
            KKLKMSTTTSDD+E            GT    K RYKRRK+AIFFAYCGVGYQGMQKNPG
Sbjct: 27   KKLKMSTTTSDDEE-------CIAGTGT----KKRYKRRKVAIFFAYCGVGYQGMQKNPG 75

Query: 1494 AKTIEGDLEEALYHSGAVPEQDRGLPKRFDFARSARTDKGVSAVGQVVSGRFYVDPPGLI 1315
            AKTIEGDLEEALY SGAVPEQDRG+PKR+D+ARSARTDKGVSAVGQVVSGRFY+DPPGL+
Sbjct: 76   AKTIEGDLEEALYVSGAVPEQDRGVPKRYDWARSARTDKGVSAVGQVVSGRFYIDPPGLV 135

Query: 1314 ERLNSNLSPQIRVFGFKRVTGSFNAKKFCDRRRYVYLIPVFALDPSCHRDRESVLASVGS 1135
            +RLNSNL  QIR+FG+KRVT SFNAKKFCDRRRYVYLIPVFALDPSCHRDRE+V+AS+GS
Sbjct: 136  DRLNSNLPSQIRIFGYKRVTASFNAKKFCDRRRYVYLIPVFALDPSCHRDRETVMASLGS 195

Query: 1134 ENELVKCLECSERGRKVFGVMGKRNLHSKSDSEAVSVDSSITLNTSS--------LLELE 979
             NELVKCLECSERGRKV G++G R      + EAV V++ I+ N  S         L   
Sbjct: 196  GNELVKCLECSERGRKVVGLVGNRK--QNLELEAVDVEAGISSNRDSGVTEDVEVSLSKG 253

Query: 978  NDEKIVVKTSEXXXXXXXXXXNKFNTEPVKD-----LGDGAAQSDKIEEDKVDCGNVDGN 814
            +D  +  ++                  PV++      G+    SD +EE+K     V+G 
Sbjct: 254  DDNHLNEESGNDNKGGMNCKTGLETVIPVQEEGTPLNGESVNNSDILEEEK-----VNGE 308

Query: 813  LKPEKRSEFSYGEQERERFNRILKFYEGTHNFHNFTTRTKAEDPSAKRYIISFNANTTIN 634
             KP   S F YGE+ERERFN+ILK + GTHNFHNFTTRTKAEDP+A+RYIISFNANTT+ 
Sbjct: 309  DKPTNGSRFCYGEKERERFNKILKCFVGTHNFHNFTTRTKAEDPAARRYIISFNANTTLV 368

Query: 633  VEGIEFVKCEVIGQSFMLHQIRKLIGLAVAIMRNIAPESLIEAAFEQNVNINVPMAPEVG 454
            VEG+EFVKCEV+GQSFMLHQIRK+IGLAVAIMRN APESLI+ A +Q+VNINVP APEVG
Sbjct: 369  VEGVEFVKCEVVGQSFMLHQIRKMIGLAVAIMRNCAPESLIDEALQQDVNINVPTAPEVG 428

Query: 453  LYLDECFFSSYNKKWKDSHEELSMKAYAEEAEDFKMKYIYSHIASTEHKDGVVALWLHSL 274
            LYLDECFF+SYN+KWKD HEELSMKAY +EA++FKMKYIYSHIASTE K+G VALWLHSL
Sbjct: 429  LYLDECFFTSYNQKWKD-HEELSMKAYEKEADEFKMKYIYSHIASTEQKEGTVALWLHSL 487

Query: 273  NYRNYSDLRGLNSGQSTETKCDEFVDNCQNTDVK 172
            N+RNY DL  +N         +E + N ++ D K
Sbjct: 488  NHRNYPDLHVIN---------EEAIPNNKSADPK 512


>ref|XP_007154900.1| hypothetical protein PHAVU_003G157400g [Phaseolus vulgaris]
            gi|593783723|ref|XP_007154902.1| hypothetical protein
            PHAVU_003G157400g [Phaseolus vulgaris]
            gi|561028254|gb|ESW26894.1| hypothetical protein
            PHAVU_003G157400g [Phaseolus vulgaris]
            gi|561028256|gb|ESW26896.1| hypothetical protein
            PHAVU_003G157400g [Phaseolus vulgaris]
          Length = 586

 Score =  643 bits (1659), Expect = 0.0
 Identities = 336/511 (65%), Positives = 386/511 (75%), Gaps = 24/511 (4%)
 Frame = -1

Query: 1674 KKLKMSTTTSDDDENYDKAPAAADADGTILPRKPRYKRRKIAIFFAYCGVGYQGMQKNPG 1495
            KKLKMSTT+  DDE    AP A          K RYKRRKIAIFFAYCGVGYQGMQKNPG
Sbjct: 27   KKLKMSTTS--DDEECTTAPGA----------KKRYKRRKIAIFFAYCGVGYQGMQKNPG 74

Query: 1494 AKTIEGDLEEALYHSGAVPEQDRGLPKRFDFARSARTDKGVSAVGQVVSGRFYVDPPGLI 1315
            AKTIEGDLEEALY SGAVPE DRG+PKR+D+ARSARTDKGVSAVGQVVSGRFY+DPPGL+
Sbjct: 75   AKTIEGDLEEALYVSGAVPEHDRGIPKRYDWARSARTDKGVSAVGQVVSGRFYIDPPGLV 134

Query: 1314 ERLNSNLSPQIRVFGFKRVTGSFNAKKFCDRRRYVYLIPVFALDPSCHRDRESVLASVGS 1135
            +RLNSNL  QIR+FG+KRVTGSFNAKKFCDRRRYVYLIPVFALDP CHRDRE+V+AS+GS
Sbjct: 135  DRLNSNLHSQIRIFGYKRVTGSFNAKKFCDRRRYVYLIPVFALDPCCHRDRETVMASLGS 194

Query: 1134 ENELVKCLECSERGRKVFGVMGKRNLHSKSDSEAVSVDSSITLNTSSLLE---------- 985
             NELVKCLECSERGRKV G++G R      + EA+ V++ I+ NT  +L+          
Sbjct: 195  TNELVKCLECSERGRKVVGLVGNRK--HNLELEAMDVEAGISSNTDVVLDSVVTGDVEAS 252

Query: 984  --------------LENDEKIVVKTSEXXXXXXXXXXNKFNTEPVKDLGDGAAQSDKIEE 847
                          ++N  K++V  +            +    P+   G+    SD IEE
Sbjct: 253  LSKGDDNHLNGESGIDNKGKVLVDGTNLKTGIEKGIPVQDEVMPLN--GESVNNSDIIEE 310

Query: 846  DKVDCGNVDGNLKPEKRSEFSYGEQERERFNRILKFYEGTHNFHNFTTRTKAEDPSAKRY 667
            +K++     G  K    S F YGE+ERERFN+IL  + GTHNFHNFTTRTKAEDP+A+RY
Sbjct: 311  EKMN-----GEDKSTSGSMFCYGEKERERFNKILNCFVGTHNFHNFTTRTKAEDPAARRY 365

Query: 666  IISFNANTTINVEGIEFVKCEVIGQSFMLHQIRKLIGLAVAIMRNIAPESLIEAAFEQNV 487
            IISFNANT   VEGIEFVKCEV+GQSFMLHQIRK++GLAVAIMRN APESLI  A +Q+V
Sbjct: 366  IISFNANTAFAVEGIEFVKCEVVGQSFMLHQIRKMMGLAVAIMRNCAPESLINKALQQDV 425

Query: 486  NINVPMAPEVGLYLDECFFSSYNKKWKDSHEELSMKAYAEEAEDFKMKYIYSHIASTEHK 307
            NINVP APEVGLYLDECFFSSYN+KWKDSHEELSMKAY +EAE+FKMKYIYSHI+ TE K
Sbjct: 426  NINVPTAPEVGLYLDECFFSSYNQKWKDSHEELSMKAYEKEAEEFKMKYIYSHISFTEQK 485

Query: 306  DGVVALWLHSLNYRNYSDLRGLNSGQSTETK 214
            +G VALWLHSLN+RNY DLR +N    T+ K
Sbjct: 486  EGTVALWLHSLNHRNYPDLRVVNEEAITDNK 516


>ref|XP_010064573.1| PREDICTED: tRNA pseudouridine synthase A, mitochondrial [Eucalyptus
            grandis] gi|629102556|gb|KCW68025.1| hypothetical protein
            EUGRSUZ_F01708 [Eucalyptus grandis]
          Length = 553

 Score =  642 bits (1655), Expect = 0.0
 Identities = 343/517 (66%), Positives = 391/517 (75%), Gaps = 27/517 (5%)
 Frame = -1

Query: 1674 KKLKMS--TTTSDDDENYDKAPAAADADGT--ILPRKPRYKRRKIAIFFAYCGVGYQGMQ 1507
            KK KMS  TTTSDDDE    APA ADADG      RKPRYKRRK+AIFFAYCGVGYQGMQ
Sbjct: 40   KKPKMSSTTTTSDDDE---AAPALADADGAGDETTRKPRYKRRKVAIFFAYCGVGYQGMQ 96

Query: 1506 KNPGAKTIEGDLEEALYHSGAVPEQDRGLPKRFDFARSARTDKGVSAVGQVVSGRFYVDP 1327
            KNPGAKTIEGDLEEAL+ SGAV E DRG PKR+D+ARSARTDKGVSAVGQVVSGRFY+DP
Sbjct: 97   KNPGAKTIEGDLEEALFLSGAVSEADRGNPKRYDWARSARTDKGVSAVGQVVSGRFYIDP 156

Query: 1326 PGLIERLNSNLSPQIRVFGFKRVTGSFNAKKFCDRRRYVYLIPVFALDPSCHRDRESVLA 1147
            PGL++RLNSNL+PQIR+FG+KR T SF+AKKFCDRRRYVYLIPVFALDPS HRDRESV A
Sbjct: 157  PGLVDRLNSNLNPQIRIFGYKRATASFSAKKFCDRRRYVYLIPVFALDPSSHRDRESVAA 216

Query: 1146 SVGSENELVKCLECSERGRKVFGVMGKRNLHSKS-------------DSEAVSVDSSITL 1006
            S+GS NELVKCLECSERGRKV GVMGKRN   +              DS    V+S IT 
Sbjct: 217  SLGSGNELVKCLECSERGRKVVGVMGKRNFELRGHVSDSNGCEEATVDSVDAKVESGITS 276

Query: 1005 N-TSSLLELENDEKIVVKTSE-XXXXXXXXXXNKFNTEPVKD----LGDGAAQSDKIE-- 850
            N   + +  E  E IV  +S            +K +T  + D    +    A SD     
Sbjct: 277  NDCCAFMGNEGKEGIVDSSSNGIDDKSISDVIDKVDTSTMVDTVVSVDSAPADSDTGSVL 336

Query: 849  --EDKVDCGNVDGNLKPEKRSEFSYGEQERERFNRILKFYEGTHNFHNFTTRTKAEDPSA 676
              + K+    V+G  KP K SEF YGE+ +ERFNRIL +Y G+HNFHNFTTRTKAEDPSA
Sbjct: 337  NLDGKIAETIVNGEEKPVKGSEFCYGEEMKERFNRILGYYVGSHNFHNFTTRTKAEDPSA 396

Query: 675  KRYIISFNANTTINVEGIEFVKCEVIGQSFMLHQIRKLIGLAVAIMRNIAPESLIEAAFE 496
            +RYI+SFN +T + VEG+EFVKCEV+GQSFMLHQIRK++GLAVAIMRN APE+LI  A +
Sbjct: 397  RRYILSFNGDTVVTVEGMEFVKCEVVGQSFMLHQIRKMMGLAVAIMRNCAPETLIVNALQ 456

Query: 495  QNVNINVPMAPEVGLYLDECFFSSYNKKWKDSHEELSMKAYAEEAEDFKMKYIYSHIAST 316
            ++V +NVP APEVGLYLDECFF+SYN KWKDSHEELSMK Y +EAEDFKMK+IY HIA T
Sbjct: 457  KDVKVNVPTAPEVGLYLDECFFTSYNNKWKDSHEELSMKDYEKEAEDFKMKHIYPHIALT 516

Query: 315  EHKDGVVALWLHSLNYRNYSDLRGLNSGQSTETKCDE 205
            EHK+GVVALWLHSLN+RNY DLR  +  + TE K  E
Sbjct: 517  EHKEGVVALWLHSLNHRNYPDLRAGDKQELTENKSSE 553


>ref|XP_008452911.1| PREDICTED: tRNA pseudouridine synthase A, mitochondrial-like [Cucumis
            melo] gi|659104353|ref|XP_008452912.1| PREDICTED: tRNA
            pseudouridine synthase A, mitochondrial-like [Cucumis
            melo] gi|307136307|gb|ADN34131.1| tRNA pseudouridine
            synthase family protein [Cucumis melo subsp. melo]
          Length = 519

 Score =  641 bits (1653), Expect = 0.0
 Identities = 338/540 (62%), Positives = 398/540 (73%), Gaps = 9/540 (1%)
 Frame = -1

Query: 1743 MEVENPNPSADXXXXXXXXXPNSKKLKMS-TTTSDDDENYDKAPAAADADGTILPRKPRY 1567
            ME E P  +           P+ KKLKMS TTT+ DDE+ +   AA        P+K RY
Sbjct: 1    MEEEPPTETRRSPPQPLIEEPDPKKLKMSSTTTTSDDEDVNSNSAA--------PKKQRY 52

Query: 1566 KRRKIAIFFAYCGVGYQGMQKNPGAKTIEGDLEEALYHSGAVPEQDRGLPKRFDFARSAR 1387
            KRRK+AIFFAYCGVGYQGMQKNPGAKTIE DLEEALY +GAVPEQDRGL KR+D+ARSAR
Sbjct: 53   KRRKVAIFFAYCGVGYQGMQKNPGAKTIEADLEEALYLAGAVPEQDRGLSKRYDWARSAR 112

Query: 1386 TDKGVSAVGQVVSGRFYVDPPGLIERLNSNLSPQIRVFGFKRVTGSFNAKKFCDRRRYVY 1207
            TDKGVSAVGQVVSGRFY+DPPG ++RLNSNLSPQIR+FG+KRVT SFNAKKFCDRRRYVY
Sbjct: 113  TDKGVSAVGQVVSGRFYIDPPGFVDRLNSNLSPQIRIFGYKRVTASFNAKKFCDRRRYVY 172

Query: 1206 LIPVFALDPSCHRDRESVLASVGSENELVKCLECSERGRKVFGVMGKRNLHSKSDSEAVS 1027
            LIPVFALDP+CHRDRESV AS+GS+NELVKCLECSERGRKV G+MGKRN   K+      
Sbjct: 173  LIPVFALDPNCHRDRESVKASLGSDNELVKCLECSERGRKVEGLMGKRNFEVKTAITESD 232

Query: 1026 VDSSITLNTSSLLELENDEKIVVKTSEXXXXXXXXXXNKFNTEPVKDLGDGAAQSDKIE- 850
            + S+I +N   + +++ +  +    +            +     +    +G A+S+  E 
Sbjct: 233  ISSNI-VNAIEVSDVQANGVLEDSATTSDSNKQTSVLVENTATELTVASEGIAKSESSEM 291

Query: 849  -------EDKVDCGNVDGNLKPEKRSEFSYGEQERERFNRILKFYEGTHNFHNFTTRTKA 691
                   E  V   +V+G  KP     F YGE+E+ RFNRILK Y GTHNFHNFTTRTKA
Sbjct: 292  SGLGNDSEIVVSKESVNGKEKPS--GSFKYGEEEKARFNRILKHYVGTHNFHNFTTRTKA 349

Query: 690  EDPSAKRYIISFNANTTINVEGIEFVKCEVIGQSFMLHQIRKLIGLAVAIMRNIAPESLI 511
            EDP+A+R+I+SF+A+TT+ VEGIEFVKCEV+GQSFMLHQIRK++GLAVAIMRN APESLI
Sbjct: 350  EDPAARRFIVSFDASTTVVVEGIEFVKCEVVGQSFMLHQIRKMMGLAVAIMRNCAPESLI 409

Query: 510  EAAFEQNVNINVPMAPEVGLYLDECFFSSYNKKWKDSHEELSMKAYAEEAEDFKMKYIYS 331
            E A +++VNINVP APEVGLYLDEC F+SYN+KWKD+HEE+SMKAY E AEDFKMK IYS
Sbjct: 410  EKALQKDVNINVPTAPEVGLYLDECLFTSYNQKWKDTHEEVSMKAYEEVAEDFKMKQIYS 469

Query: 330  HIASTEHKDGVVALWLHSLNYRNYSDLRGLNSGQSTETKCDEFVDNCQNTDVKHNEAVDT 151
            HIASTEHKDG VALWLHSLN+RNY DLR +          DE     +NT V      +T
Sbjct: 470  HIASTEHKDGAVALWLHSLNHRNYPDLRVI----------DEVAKIAKNTSVDMETQAET 519


>ref|XP_006575306.1| PREDICTED: tRNA pseudouridine synthase A, mitochondrial-like isoform
            X2 [Glycine max]
          Length = 518

 Score =  640 bits (1650), Expect = e-180
 Identities = 337/510 (66%), Positives = 390/510 (76%), Gaps = 13/510 (2%)
 Frame = -1

Query: 1662 MSTTTSDDDENYDKAPAAADADGTILPRKPRYKRRKIAIFFAYCGVGYQGMQKNPGAKTI 1483
            MSTTTSDD+E            GT    K RYKRRK+AIFFAYCGVGYQGMQKNPGAKTI
Sbjct: 1    MSTTTSDDEET-----------GT----KKRYKRRKVAIFFAYCGVGYQGMQKNPGAKTI 45

Query: 1482 EGDLEEALYHSGAVPEQDRGLPKRFDFARSARTDKGVSAVGQVVSGRFYVDPPGLIERLN 1303
            EGDLEEALY SGAVPEQDRG+PKR+D+ARSARTDKGVSAVGQVVSGRFY+DPPGL++RLN
Sbjct: 46   EGDLEEALYVSGAVPEQDRGVPKRYDWARSARTDKGVSAVGQVVSGRFYIDPPGLVDRLN 105

Query: 1302 SNLSPQIRVFGFKRVTGSFNAKKFCDRRRYVYLIPVFALDPSCHRDRESVLASVGSENEL 1123
            SNL  QIR+FG+KRVT SFNAKKFCDRRRYVYLIPVFALDPSCHRDRE+V+AS+GS NEL
Sbjct: 106  SNLPSQIRIFGYKRVTASFNAKKFCDRRRYVYLIPVFALDPSCHRDRETVMASLGSGNEL 165

Query: 1122 VKCLECSERGRKVFGVMGKRNLHSKSDSEAVSVDSSITLNTSS--------LLELENDEK 967
            VKCLECSERGRKV G++G R      + EAV V++ I+ N  S         L   +D  
Sbjct: 166  VKCLECSERGRKVVGLVGNRK--QNLELEAVDVEAGISSNRDSGVTEDVEVSLSKGDDNH 223

Query: 966  IVVKTSEXXXXXXXXXXNKFNTEPVKD-----LGDGAAQSDKIEEDKVDCGNVDGNLKPE 802
            +  ++                  PV++      G+    SD +EE+K     V+G  KP 
Sbjct: 224  LNEESGNDNKGGMNCKTGLETVIPVQEEGTPLNGESVNNSDILEEEK-----VNGEDKPT 278

Query: 801  KRSEFSYGEQERERFNRILKFYEGTHNFHNFTTRTKAEDPSAKRYIISFNANTTINVEGI 622
              S F YGE+ERERFN+ILK + GTHNFHNFTTRTKAEDP+A+RYIISFNANTT+ VEG+
Sbjct: 279  NGSRFCYGEKERERFNKILKCFVGTHNFHNFTTRTKAEDPAARRYIISFNANTTLVVEGV 338

Query: 621  EFVKCEVIGQSFMLHQIRKLIGLAVAIMRNIAPESLIEAAFEQNVNINVPMAPEVGLYLD 442
            EFVKCEV+GQSFMLHQIRK+IGLAVAIMRN APESLI+ A +Q+VNINVP APEVGLYLD
Sbjct: 339  EFVKCEVVGQSFMLHQIRKMIGLAVAIMRNCAPESLIDEALQQDVNINVPTAPEVGLYLD 398

Query: 441  ECFFSSYNKKWKDSHEELSMKAYAEEAEDFKMKYIYSHIASTEHKDGVVALWLHSLNYRN 262
            ECFF+SYN+KWKD HEELSMKAY +EA++FKMKYIYSHIASTE K+G VALWLHSLN+RN
Sbjct: 399  ECFFTSYNQKWKD-HEELSMKAYEKEADEFKMKYIYSHIASTEQKEGTVALWLHSLNHRN 457

Query: 261  YSDLRGLNSGQSTETKCDEFVDNCQNTDVK 172
            Y DLR +N         +E + N ++ D K
Sbjct: 458  YPDLRVIN---------EEAIPNNKSADPK 478


>ref|XP_002307759.2| hypothetical protein POPTR_0005s26830g [Populus trichocarpa]
            gi|550339814|gb|EEE94755.2| hypothetical protein
            POPTR_0005s26830g [Populus trichocarpa]
          Length = 497

 Score =  640 bits (1650), Expect = e-180
 Identities = 325/483 (67%), Positives = 386/483 (79%)
 Frame = -1

Query: 1674 KKLKMSTTTSDDDENYDKAPAAADADGTILPRKPRYKRRKIAIFFAYCGVGYQGMQKNPG 1495
            K+ KMSTTTS+D+   D A      D TI  +K RYKRRKIAIF  YCGVGYQGMQKNPG
Sbjct: 21   KRPKMSTTTSEDE---DAATTTPGDDTTI--KKQRYKRRKIAIFLTYCGVGYQGMQKNPG 75

Query: 1494 AKTIEGDLEEALYHSGAVPEQDRGLPKRFDFARSARTDKGVSAVGQVVSGRFYVDPPGLI 1315
            AKTIEGDLEEAL+H+GAVPE DRG+PKR+D+ARSARTDKGVSAVGQVVSGRFY+DPPGL+
Sbjct: 76   AKTIEGDLEEALFHAGAVPEHDRGIPKRYDWARSARTDKGVSAVGQVVSGRFYIDPPGLV 135

Query: 1314 ERLNSNLSPQIRVFGFKRVTGSFNAKKFCDRRRYVYLIPVFALDPSCHRDRESVLASVGS 1135
            ERL+SNLSPQIR+FG+KRVTGSFNAKKFCDRRRYVYLIPVFAL+P  HRDRESVLAS+GS
Sbjct: 136  ERLHSNLSPQIRIFGYKRVTGSFNAKKFCDRRRYVYLIPVFALNPCSHRDRESVLASLGS 195

Query: 1134 ENELVKCLECSERGRKVFGVMGKRNLHSKSDSEAVSVDSSITLNTSSLLELENDEKIVVK 955
             +ELVKCL+CSERGRKV G +GKR+  SKSD     + S+   +  + L+ E  E++ + 
Sbjct: 196  GSELVKCLQCSERGRKVVGAVGKRSFESKSDVSPTEIWSN---DKDTTLKSEIKEEVSIS 252

Query: 954  TSEXXXXXXXXXXNKFNTEPVKDLGDGAAQSDKIEEDKVDCGNVDGNLKPEKRSEFSYGE 775
            ++            +   E +  + +G  ++ K EE+ +            K S F YGE
Sbjct: 253  SNS----EDANANPEIKDEIMVSIENGDDKNTKSEEEAI------------KGSGFCYGE 296

Query: 774  QERERFNRILKFYEGTHNFHNFTTRTKAEDPSAKRYIISFNANTTINVEGIEFVKCEVIG 595
            +E+ERFNRIL +Y G+HNFHNFTTRTKAEDPSA+RYIISF+A TT+ VEGIEFVKCEV+G
Sbjct: 297  KEKERFNRILNYYLGSHNFHNFTTRTKAEDPSAQRYIISFDAKTTVAVEGIEFVKCEVVG 356

Query: 594  QSFMLHQIRKLIGLAVAIMRNIAPESLIEAAFEQNVNINVPMAPEVGLYLDECFFSSYNK 415
            QSFMLHQIRK+IG+AVAIMRN A ESLI+ A ++NVNINVP APEVGLYLDECFF+SYN+
Sbjct: 357  QSFMLHQIRKMIGVAVAIMRNCASESLIQTALQKNVNINVPTAPEVGLYLDECFFTSYNQ 416

Query: 414  KWKDSHEELSMKAYAEEAEDFKMKYIYSHIASTEHKDGVVALWLHSLNYRNYSDLRGLNS 235
            KWKDSHEELSMK Y EEAE+FKMK+IYSHIA+TEHK+G VALWLHSLN+RNY DLR  ++
Sbjct: 417  KWKDSHEELSMKDYEEEAEEFKMKHIYSHIATTEHKEGSVALWLHSLNHRNYPDLRACDN 476

Query: 234  GQS 226
            G +
Sbjct: 477  GDN 479


>ref|XP_011034929.1| PREDICTED: tRNA pseudouridine synthase A, mitochondrial [Populus
            euphratica]
          Length = 534

 Score =  638 bits (1645), Expect = e-180
 Identities = 331/493 (67%), Positives = 379/493 (76%), Gaps = 13/493 (2%)
 Frame = -1

Query: 1674 KKLKMSTTTSDDDENYDKAPAAADADGTILPRKPRYKRRKIAIFFAYCGVGYQGMQKNPG 1495
            KK KMSTTTSDD++     P      G    +K RYKRRKIAIFFAYCGVGYQGMQKNPG
Sbjct: 21   KKPKMSTTTSDDEDAATMTPG-----GDTTTKKQRYKRRKIAIFFAYCGVGYQGMQKNPG 75

Query: 1494 AKTIEGDLEEALYHSGAVPEQDRGLPKRFDFARSARTDKGVSAVGQVVSGRFYVDPPGLI 1315
            AKTIEGDLEEAL+H+GAVPEQDRG+PKR+D+ARSARTDKGVSAVGQVVSGRFY+DPPGL+
Sbjct: 76   AKTIEGDLEEALFHAGAVPEQDRGIPKRYDWARSARTDKGVSAVGQVVSGRFYIDPPGLV 135

Query: 1314 ERLNSNLSPQIRVFGFKRVTGSFNAKKFCDRRRYVYLIPVFALDPSCHRDRESVLASVGS 1135
            ERL+SNLSPQ R+FG+KRVTGSFNAKKFCDRRRYVYLIPVFALDP  HRDRESVLAS+GS
Sbjct: 136  ERLHSNLSPQFRIFGYKRVTGSFNAKKFCDRRRYVYLIPVFALDPCSHRDRESVLASLGS 195

Query: 1134 ENELVKCLECSERGRKVFGVMGKRNLH----SKSDSEAVSVDSSITLNTSSLLE--LEND 973
             +EL+KCLECSERGRKV G +GKR+      S +D +A SV S I       L+  LE+ 
Sbjct: 196  GSELIKCLECSERGRKVAGAVGKRSFELTDISSNDKDA-SVKSEIKEEVGVHLDNGLEDI 254

Query: 972  EKIVVKTSEXXXXXXXXXXNKFNTEPV--KDLGDGAAQSDKIEEDKVDCGNVDGNLKPE- 802
                                    EPV   +  D    ++  +E  V   N D       
Sbjct: 255  RNSETVNETKIFQNDGCGSKSVMPEPVIPSNSEDANVNTENKDEIIVSVENGDDEKTKSK 314

Query: 801  ----KRSEFSYGEQERERFNRILKFYEGTHNFHNFTTRTKAEDPSAKRYIISFNANTTIN 634
                KRS F YGE+E+ERFNRIL +Y G+HNFHNFTTRTKAEDPSA+RY++SF A TT+N
Sbjct: 315  EEMVKRSRFCYGEKEKERFNRILGYYVGSHNFHNFTTRTKAEDPSARRYMVSFEAKTTVN 374

Query: 633  VEGIEFVKCEVIGQSFMLHQIRKLIGLAVAIMRNIAPESLIEAAFEQNVNINVPMAPEVG 454
            VEGIEFVKCEV+GQSFMLHQIRK+IG+AVAIMRN APESLI+ A +++VNINVP APEVG
Sbjct: 375  VEGIEFVKCEVVGQSFMLHQIRKMIGVAVAIMRNCAPESLIQTALQKDVNINVPTAPEVG 434

Query: 453  LYLDECFFSSYNKKWKDSHEELSMKAYAEEAEDFKMKYIYSHIASTEHKDGVVALWLHSL 274
            LYLDEC F+SYNKKWKDSHEE+SMK Y EEAEDFKMK+IYSHIA+TEHK+G V+LWLHSL
Sbjct: 435  LYLDECLFTSYNKKWKDSHEEISMKDYEEEAEDFKMKHIYSHIATTEHKEGSVSLWLHSL 494

Query: 273  NYRNYSDLRGLNS 235
            N RNY DLR  N+
Sbjct: 495  NQRNYPDLRVSNT 507


>ref|XP_010266077.1| PREDICTED: tRNA pseudouridine synthase A, mitochondrial isoform X2
            [Nelumbo nucifera]
          Length = 475

 Score =  637 bits (1644), Expect = e-180
 Identities = 320/477 (67%), Positives = 376/477 (78%), Gaps = 3/477 (0%)
 Frame = -1

Query: 1668 LKMSTTTSDDDENYDKAPAAADADGTILPRKPRYKRRKIAIFFAYCGVGYQGMQKNPGAK 1489
            +  +TTT+ DDE Y+  P +AD   T   RK RYKRRK+AIFFAYCGVGYQGMQKNPGAK
Sbjct: 1    MSSTTTTTSDDEEYEINPNSAD---TTTQRKRRYKRRKVAIFFAYCGVGYQGMQKNPGAK 57

Query: 1488 TIEGDLEEALYHSGAVPEQDRGLPKRFDFARSARTDKGVSAVGQVVSGRFYVDPPGLIER 1309
            TIEGDLEEALY SGAVPE DRG PKRFD+ARSARTDKGVSAVGQVVSGRFY+DPPGL++R
Sbjct: 58   TIEGDLEEALYLSGAVPEVDRGNPKRFDWARSARTDKGVSAVGQVVSGRFYIDPPGLVDR 117

Query: 1308 LNSNLSPQIRVFGFKRVTGSFNAKKFCDRRRYVYLIPVFALDPSCHRDRESVLASVGSEN 1129
            LNSNL  QIR+FGFKRVT SFNAKKFCDRRRYVYLIPVFALDPS HRDRESVLAS+GSEN
Sbjct: 118  LNSNLPSQIRIFGFKRVTSSFNAKKFCDRRRYVYLIPVFALDPSSHRDRESVLASLGSEN 177

Query: 1128 ELVKCLECSERGRKVFGVMGKRNLHSKSDSEAVSVDSSITLNTSSLLELENDEKIVVKTS 949
            ELVKCLECSERGRKV GVMG+RN  SK+     +  S   L + +++ + +  +  ++  
Sbjct: 178  ELVKCLECSERGRKVAGVMGRRNSESKNVENGGNDASQSGLTSDNVITVLSHSETKIEPE 237

Query: 948  EXXXXXXXXXXNKFNTEPVKDLGDGAAQS---DKIEEDKVDCGNVDGNLKPEKRSEFSYG 778
                            +P     D +A +   ++ +++ V CGN  G     K   F YG
Sbjct: 238  VSSIDAVALSNFALAVDPCLVSSDNSAAAPHPEQADQNLVRCGN--GGGAAVKGRVFCYG 295

Query: 777  EQERERFNRILKFYEGTHNFHNFTTRTKAEDPSAKRYIISFNANTTINVEGIEFVKCEVI 598
            E+E+ERFNRILK YEGTHNFHNFTTRTK EDPSA RYI+SF+AN  + VEGI+FVKCEV+
Sbjct: 296  EKEKERFNRILKHYEGTHNFHNFTTRTKVEDPSANRYIVSFDANKVVTVEGIDFVKCEVV 355

Query: 597  GQSFMLHQIRKLIGLAVAIMRNIAPESLIEAAFEQNVNINVPMAPEVGLYLDECFFSSYN 418
            GQSFMLHQIRK++GLAVA+MRN APESLI  A ++++NINVP APEVGLYLDEC F+SYN
Sbjct: 356  GQSFMLHQIRKMVGLAVAVMRNCAPESLINIALQKDININVPTAPEVGLYLDECLFTSYN 415

Query: 417  KKWKDSHEELSMKAYAEEAEDFKMKYIYSHIASTEHKDGVVALWLHSLNYRNYSDLR 247
            +KWKDSHEE+SM+AY EEAEDFK++ IY+HI+ TE K+GVVALWLHSLN+RNY DLR
Sbjct: 416  QKWKDSHEEISMEAYKEEAEDFKIQQIYTHISFTEQKEGVVALWLHSLNHRNYPDLR 472


>ref|XP_011003107.1| PREDICTED: LOW QUALITY PROTEIN: tRNA pseudouridine synthase A,
            mitochondrial [Populus euphratica]
          Length = 538

 Score =  637 bits (1643), Expect = e-180
 Identities = 328/511 (64%), Positives = 389/511 (76%), Gaps = 28/511 (5%)
 Frame = -1

Query: 1674 KKLKMSTTTSDDDENYDKAPAAADADGTILPRKPRYKRRKIAIFFAYCGVGYQGMQKNPG 1495
            K+ KMS TTS+D+   D A      D TI  +K RYKRRKIAIFFAYCGVGYQGMQKNPG
Sbjct: 21   KRPKMSATTSEDE---DAATTTPGDDTTI--KKQRYKRRKIAIFFAYCGVGYQGMQKNPG 75

Query: 1494 AKTIEGDLEEALYHSGAVPEQDRGLPKRFDFARSARTDKGVSAVGQVVSGRFYVDPPGLI 1315
            AKTIEGDLEEAL+H+GAVPE DRG+PKR+D+ARSARTDKGVSAVGQVVSGRFY+DPPGL+
Sbjct: 76   AKTIEGDLEEALFHAGAVPEHDRGIPKRYDWARSARTDKGVSAVGQVVSGRFYIDPPGLV 135

Query: 1314 ERLNSNLSPQIRVFGFKRVTGSFNAKKFCDRRRYVYLIPVFALDPSCHRDRESVLASVGS 1135
            ERL+SNLSPQIR+FG+KRVTGSFNAKKFCDRRRYVYLIPVFAL+P  HRDRESVLAS+GS
Sbjct: 136  ERLHSNLSPQIRIFGYKRVTGSFNAKKFCDRRRYVYLIPVFALNPCSHRDRESVLASLGS 195

Query: 1134 ENELVKCLECSERGRKVFGVMGKRNLHSKSDSEAVSVDSSITLNTSSLLELENDEKIVVK 955
             +ELVKCL+CSERGRKV G +GKR+  SKSD     + S+   +T+   E++ +   ++ 
Sbjct: 196  GSELVKCLQCSERGRKVVGAVGKRSFESKSDVSPTEIWSN-DKDTTLKYEIKEEVSGLMD 254

Query: 954  TSEXXXXXXXXXXNKFNTEPVKDL----GDGAAQSDKIEEDKVDCGNVDGNLKPE----- 802
              +             N+EPV +      + + +  +  E  +   + D N  PE     
Sbjct: 255  NGDGDIR---------NSEPVDETKVFQNEDSGKKSETTESGISSNSEDANANPEIKDEM 305

Query: 801  -------------------KRSEFSYGEQERERFNRILKFYEGTHNFHNFTTRTKAEDPS 679
                               K S F YGE+E+ERFNRIL +Y G+HNFHNFTTRTKAEDPS
Sbjct: 306  MVSIENGDDKNTKSEEEAIKGSGFCYGEKEKERFNRILNYYVGSHNFHNFTTRTKAEDPS 365

Query: 678  AKRYIISFNANTTINVEGIEFVKCEVIGQSFMLHQIRKLIGLAVAIMRNIAPESLIEAAF 499
            A+RYIISF+A TT+ VEGIEFVKCEV+GQSFMLHQIRK+IG+AVAIMRN A ESLI+ A 
Sbjct: 366  AQRYIISFDAKTTVTVEGIEFVKCEVVGQSFMLHQIRKMIGVAVAIMRNCASESLIQTAL 425

Query: 498  EQNVNINVPMAPEVGLYLDECFFSSYNKKWKDSHEELSMKAYAEEAEDFKMKYIYSHIAS 319
            ++NVNINVP APEVGLYLDECFF+SYN+KWKDSHEELSMK Y EEAE+FKM++IYSHIA+
Sbjct: 426  QKNVNINVPTAPEVGLYLDECFFTSYNQKWKDSHEELSMKDYEEEAEEFKMQHIYSHIAT 485

Query: 318  TEHKDGVVALWLHSLNYRNYSDLRGLNSGQS 226
            TEHK+G VALWLHSLNY NY DLR  ++G +
Sbjct: 486  TEHKEGSVALWLHSLNYXNYPDLRVCDNGDN 516


>ref|XP_004145528.1| PREDICTED: tRNA pseudouridine synthase A, mitochondrial-like [Cucumis
            sativus] gi|700200317|gb|KGN55475.1| hypothetical protein
            Csa_4G652870 [Cucumis sativus]
          Length = 519

 Score =  637 bits (1643), Expect = e-180
 Identities = 330/509 (64%), Positives = 390/509 (76%), Gaps = 10/509 (1%)
 Frame = -1

Query: 1743 MEVENPNPSADXXXXXXXXXPNSKKLKMS-TTTSDDDENYDKAPAAADADGTILPRKPRY 1567
            ME E P  +           P  KKLKMS TTT+ DDE+ +   AA        P+K RY
Sbjct: 1    MEEEPPTETRRSPPQPLIEEPQPKKLKMSSTTTTSDDEDVNSNSAA--------PKKQRY 52

Query: 1566 KRRKIAIFFAYCGVGYQGMQKNPGAKTIEGDLEEALYHSGAVPEQDRGLPKRFDFARSAR 1387
            KRRK+AIFFAYCGVGYQGMQKNPGAKTIE DLEEALY +GAVPEQDRGL KR+D+ARSAR
Sbjct: 53   KRRKVAIFFAYCGVGYQGMQKNPGAKTIEADLEEALYLAGAVPEQDRGLSKRYDWARSAR 112

Query: 1386 TDKGVSAVGQVVSGRFYVDPPGLIERLNSNLSPQIRVFGFKRVTGSFNAKKFCDRRRYVY 1207
            TDKGVSAVGQVVSGRFY+DPPG ++RLNSNLSPQIR+FG+KRVT SFNAKKFCDRRRYVY
Sbjct: 113  TDKGVSAVGQVVSGRFYIDPPGFVDRLNSNLSPQIRIFGYKRVTASFNAKKFCDRRRYVY 172

Query: 1206 LIPVFALDPSCHRDRESVLASVGSENELVKCLECSERGRKVFGVMGKRNLHSKSDSEAVS 1027
            LIPVFALDP+CHRDRESV AS+GS+NELVKCLECSERGRKV G++GKRN   K+      
Sbjct: 173  LIPVFALDPNCHRDRESVKASLGSDNELVKCLECSERGRKVEGLIGKRNFEVKT----AI 228

Query: 1026 VDSSITLNTSSLLELENDEK--IVVKTSEXXXXXXXXXXNKFNTEPVKDLG-DGAAQSDK 856
             +S I+ NT + +E+ + +   ++  ++              NT    ++G +G A+S+ 
Sbjct: 229  TESDISSNTVNAIEVSDVQANGVLEDSATTSDSNKQTSVLVENTATELNVGSEGTAKSES 288

Query: 855  IE------EDKVDCGNVDGNLKPEKRSEFSYGEQERERFNRILKFYEGTHNFHNFTTRTK 694
             E      + ++       N K +    F YGE+E+ RFNRILK Y GTHNFHNFTTRTK
Sbjct: 289  SEMSGLGSDSEIVVSKESVNGKEKSSGSFKYGEEEKARFNRILKHYVGTHNFHNFTTRTK 348

Query: 693  AEDPSAKRYIISFNANTTINVEGIEFVKCEVIGQSFMLHQIRKLIGLAVAIMRNIAPESL 514
            AEDP+A+R+I+SF+A+  + VEGIEFVKCEV+GQSFMLHQIRK++GLAVAIMRN APESL
Sbjct: 349  AEDPAARRFIVSFDASAIVVVEGIEFVKCEVVGQSFMLHQIRKMMGLAVAIMRNCAPESL 408

Query: 513  IEAAFEQNVNINVPMAPEVGLYLDECFFSSYNKKWKDSHEELSMKAYAEEAEDFKMKYIY 334
            IE A +++VNINVP APEVGLYLDEC F+SYN+KWKD+HEE+SMKAY E AEDFKMK IY
Sbjct: 409  IEKALQKDVNINVPTAPEVGLYLDECLFTSYNQKWKDTHEEVSMKAYEEAAEDFKMKQIY 468

Query: 333  SHIASTEHKDGVVALWLHSLNYRNYSDLR 247
            SHIASTEHKDG VALWLHSLN+RNY DLR
Sbjct: 469  SHIASTEHKDGAVALWLHSLNHRNYPDLR 497


>ref|XP_007154901.1| hypothetical protein PHAVU_003G157400g [Phaseolus vulgaris]
            gi|561028255|gb|ESW26895.1| hypothetical protein
            PHAVU_003G157400g [Phaseolus vulgaris]
          Length = 556

 Score =  636 bits (1640), Expect = e-179
 Identities = 329/504 (65%), Positives = 380/504 (75%), Gaps = 24/504 (4%)
 Frame = -1

Query: 1653 TTSDDDENYDKAPAAADADGTILPRKPRYKRRKIAIFFAYCGVGYQGMQKNPGAKTIEGD 1474
            +T+ DDE    AP A          K RYKRRKIAIFFAYCGVGYQGMQKNPGAKTIEGD
Sbjct: 2    STTSDDEECTTAPGA----------KKRYKRRKIAIFFAYCGVGYQGMQKNPGAKTIEGD 51

Query: 1473 LEEALYHSGAVPEQDRGLPKRFDFARSARTDKGVSAVGQVVSGRFYVDPPGLIERLNSNL 1294
            LEEALY SGAVPE DRG+PKR+D+ARSARTDKGVSAVGQVVSGRFY+DPPGL++RLNSNL
Sbjct: 52   LEEALYVSGAVPEHDRGIPKRYDWARSARTDKGVSAVGQVVSGRFYIDPPGLVDRLNSNL 111

Query: 1293 SPQIRVFGFKRVTGSFNAKKFCDRRRYVYLIPVFALDPSCHRDRESVLASVGSENELVKC 1114
              QIR+FG+KRVTGSFNAKKFCDRRRYVYLIPVFALDP CHRDRE+V+AS+GS NELVKC
Sbjct: 112  HSQIRIFGYKRVTGSFNAKKFCDRRRYVYLIPVFALDPCCHRDRETVMASLGSTNELVKC 171

Query: 1113 LECSERGRKVFGVMGKRNLHSKSDSEAVSVDSSITLNTSSLLE----------------- 985
            LECSERGRKV G++G R      + EA+ V++ I+ NT  +L+                 
Sbjct: 172  LECSERGRKVVGLVGNRK--HNLELEAMDVEAGISSNTDVVLDSVVTGDVEASLSKGDDN 229

Query: 984  -------LENDEKIVVKTSEXXXXXXXXXXNKFNTEPVKDLGDGAAQSDKIEEDKVDCGN 826
                   ++N  K++V  +            +    P+   G+    SD IEE+K++   
Sbjct: 230  HLNGESGIDNKGKVLVDGTNLKTGIEKGIPVQDEVMPLN--GESVNNSDIIEEEKMN--- 284

Query: 825  VDGNLKPEKRSEFSYGEQERERFNRILKFYEGTHNFHNFTTRTKAEDPSAKRYIISFNAN 646
              G  K    S F YGE+ERERFN+IL  + GTHNFHNFTTRTKAEDP+A+RYIISFNAN
Sbjct: 285  --GEDKSTSGSMFCYGEKERERFNKILNCFVGTHNFHNFTTRTKAEDPAARRYIISFNAN 342

Query: 645  TTINVEGIEFVKCEVIGQSFMLHQIRKLIGLAVAIMRNIAPESLIEAAFEQNVNINVPMA 466
            T   VEGIEFVKCEV+GQSFMLHQIRK++GLAVAIMRN APESLI  A +Q+VNINVP A
Sbjct: 343  TAFAVEGIEFVKCEVVGQSFMLHQIRKMMGLAVAIMRNCAPESLINKALQQDVNINVPTA 402

Query: 465  PEVGLYLDECFFSSYNKKWKDSHEELSMKAYAEEAEDFKMKYIYSHIASTEHKDGVVALW 286
            PEVGLYLDECFFSSYN+KWKDSHEELSMKAY +EAE+FKMKYIYSHI+ TE K+G VALW
Sbjct: 403  PEVGLYLDECFFSSYNQKWKDSHEELSMKAYEKEAEEFKMKYIYSHISFTEQKEGTVALW 462

Query: 285  LHSLNYRNYSDLRGLNSGQSTETK 214
            LHSLN+RNY DLR +N    T+ K
Sbjct: 463  LHSLNHRNYPDLRVVNEEAITDNK 486


>ref|XP_002510619.1| pseudouridylate synthase, putative [Ricinus communis]
            gi|223551320|gb|EEF52806.1| pseudouridylate synthase,
            putative [Ricinus communis]
          Length = 584

 Score =  635 bits (1638), Expect = e-179
 Identities = 335/531 (63%), Positives = 388/531 (73%), Gaps = 37/531 (6%)
 Frame = -1

Query: 1674 KKLKMSTTTSDDDENYDKAPAAADADGTILPRKPRYKRRKIAIFFAYCGVGYQGMQKNPG 1495
            K+ +MSTTTSD++E    AP     D     +K RYKRRK+AIFFAYCGVGYQGMQKNPG
Sbjct: 20   KRPRMSTTTSDEEEIATTAPG----DEAATVKKQRYKRRKMAIFFAYCGVGYQGMQKNPG 75

Query: 1494 AKTIEGDLEEALYHSGAVPEQDRGLPKRFDFARSARTDKGVSAVGQVVSGRFYVDPPGLI 1315
            AKTIEGDLEEAL+HSGAVPEQDRG PKR+D+ARSARTDKGVSAVGQV+SGRFYVDPPGL+
Sbjct: 76   AKTIEGDLEEALFHSGAVPEQDRGCPKRYDWARSARTDKGVSAVGQVISGRFYVDPPGLV 135

Query: 1314 ERLNSNLSPQIRVFGFKRVTGSFNAKKFCDRRRYVYLIPVFALDPSCHRDRESVLASVGS 1135
            +RLNS L  QIR+FG+KRVT SFNAKKFCDRRRYVYLIPVFALDPS HRDRESVLAS+GS
Sbjct: 136  DRLNSILPSQIRIFGYKRVTASFNAKKFCDRRRYVYLIPVFALDPSSHRDRESVLASLGS 195

Query: 1134 ENELVKCLECSERGRKVFGVMGKRNLHSKSDS-------------EAVSVDSSITLNTSS 994
             +ELVKCLECSERGRKV G +GKR+  SKS++                 +   I+++  +
Sbjct: 196  GDELVKCLECSERGRKVIGAVGKRSFESKSEAFQTDILLNGGCAIANCEIKEDISMSMDN 255

Query: 993  LLELENDEKIVVKTSEXXXXXXXXXXNKFNTEPVKDLGDGAAQSDK------IEEDKVDC 832
               +    + V +T+               T+ + +  DG  +SD       + ED  D 
Sbjct: 256  AHGVRMHSEFVEQTNVSHNEDSETESAMPRTDILSNSEDGNVKSDSKQEEVMVSEDAADG 315

Query: 831  GN------------------VDGNLKPEKRSEFSYGEQERERFNRILKFYEGTHNFHNFT 706
            GN                  V+G     K SEF YGE+E+E+FNRILK+Y G+HNFHNFT
Sbjct: 316  GNKESETMEKDSKASVGEERVNGEEHVMKGSEFCYGEEEKEKFNRILKYYVGSHNFHNFT 375

Query: 705  TRTKAEDPSAKRYIISFNANTTINVEGIEFVKCEVIGQSFMLHQIRKLIGLAVAIMRNIA 526
            TRTKAEDPSA+RYIISF+A TT+ VEGIEFVKCEVIGQSFMLHQIRK+IGLAVAIMRN A
Sbjct: 376  TRTKAEDPSAQRYIISFDARTTVTVEGIEFVKCEVIGQSFMLHQIRKMIGLAVAIMRNCA 435

Query: 525  PESLIEAAFEQNVNINVPMAPEVGLYLDECFFSSYNKKWKDSHEELSMKAYAEEAEDFKM 346
            PESLI  A +++V INVP APEVGLYLDECFF+SYN+KWKD HEEL MK Y E AEDFKM
Sbjct: 436  PESLISTALQKDVKINVPTAPEVGLYLDECFFTSYNQKWKD-HEELCMKDYEEVAEDFKM 494

Query: 345  KYIYSHIASTEHKDGVVALWLHSLNYRNYSDLRGLNSGQSTETKCDEFVDN 193
            KYIYSHIASTE K+GVV LWLHSLNYRNY DLR   +  +   K  E V+N
Sbjct: 495  KYIYSHIASTEQKEGVVGLWLHSLNYRNYPDLRFCYTLDANNEKSTEVVNN 545


>ref|XP_008221186.1| PREDICTED: tRNA pseudouridine synthase A, mitochondrial [Prunus mume]
          Length = 532

 Score =  633 bits (1632), Expect = e-178
 Identities = 336/525 (64%), Positives = 389/525 (74%), Gaps = 15/525 (2%)
 Frame = -1

Query: 1725 NPSADXXXXXXXXXPNSKKLKMSTTTSDDDENYDKAPAAADADGTILPRKPRYKRRKIAI 1546
            NP            P+ KKLKMSTTT+ DD+           D T   +K RYKRRK+AI
Sbjct: 3    NPDTKTTISPPPQEPDPKKLKMSTTTTSDDDE------TTTMDTT---KKQRYKRRKVAI 53

Query: 1545 FFAYCGVGYQGMQKNPGAKTIEGDLEEALYHSGAVPEQDRGLPKRFDFARSARTDKGVSA 1366
            FFAYCGVGYQGMQKNPGAKTIEGDLEEALY S AVPEQDR  PKR+D+ARSARTDKGVSA
Sbjct: 54   FFAYCGVGYQGMQKNPGAKTIEGDLEEALYLSNAVPEQDRNNPKRYDWARSARTDKGVSA 113

Query: 1365 VGQVVSGRFYVDPPGLIERLNSNLSPQIRVFGFKRVTGSFNAKKFCDRRRYVYLIPVFAL 1186
            VGQVVSGRFYVDPPG ++RLNSN+SPQIR+FG+KRVT SFNAKKFCDRRRYVYLIPVFAL
Sbjct: 114  VGQVVSGRFYVDPPGFVDRLNSNISPQIRIFGYKRVTASFNAKKFCDRRRYVYLIPVFAL 173

Query: 1185 DPSCHRDRESVLASVGSENELVKCLECSERGRKVFGVMGKRNLHSKSDSEAVSVDSSITL 1006
            DPS HRDRESVLAS+GS+ E VKCLECSERGRKV G+MGKRN   +  S  + + S+   
Sbjct: 174  DPSAHRDRESVLASLGSDKEFVKCLECSERGRKVGGLMGKRNYELRGTSFGLDISSN--- 230

Query: 1005 NTSSLLELE-NDEKIVVKTSEXXXXXXXXXXNKFNTE---------PVKDLGDGAAQSDK 856
               S++E E N+E  V   +           N+ +T           V+D  D    S+ 
Sbjct: 231  TNESMVESEFNEETKVSPDNAGGDDSKSEPKNEISTSSNNNGVSGVEVEDSEDTDLNSEP 290

Query: 855  IEE-DKVDCG--NVDGNLKPEK--RSEFSYGEQERERFNRILKFYEGTHNFHNFTTRTKA 691
            + +  KV  G  N +G  KPEK   SEF YGE+E++RFNRIL  YEGTHNFHNFTTRTKA
Sbjct: 291  LNDTTKVSVGEENANGEEKPEKGSGSEFCYGEKEKDRFNRILNCYEGTHNFHNFTTRTKA 350

Query: 690  EDPSAKRYIISFNANTTINVEGIEFVKCEVIGQSFMLHQIRKLIGLAVAIMRNIAPESLI 511
             DP+A RYIISFNANTT+ V G++FVKCEV+GQSFMLHQIRK+IGLAVAI RN AP+SL+
Sbjct: 351  ADPAAWRYIISFNANTTVTVGGMDFVKCEVVGQSFMLHQIRKMIGLAVAIFRNCAPDSLL 410

Query: 510  EAAFEQNVNINVPMAPEVGLYLDECFFSSYNKKWKDSHEELSMKAYAEEAEDFKMKYIYS 331
            E A +++VN+NVP APEVGLYLDECFF+SYN+KW DSHEELSMK Y +EAEDFKMK+IY 
Sbjct: 411  EIALQKDVNVNVPTAPEVGLYLDECFFASYNQKWGDSHEELSMKDYEQEAEDFKMKHIYP 470

Query: 330  HIASTEHKDGVVALWLHSLNYRNYSDLRGLNSGQSTETKCDEFVD 196
            HIASTE K+GVV LWLHSLN+RNY DL    +     T  +E VD
Sbjct: 471  HIASTEQKEGVVGLWLHSLNHRNYPDLCTTGADNDGNTSNEESVD 515


>ref|XP_006342092.1| PREDICTED: tRNA pseudouridine synthase A, mitochondrial-like [Solanum
            tuberosum]
          Length = 569

 Score =  630 bits (1626), Expect = e-178
 Identities = 319/482 (66%), Positives = 377/482 (78%), Gaps = 3/482 (0%)
 Frame = -1

Query: 1674 KKLKMSTTTSDDDENYDKAPAAADADGTILPRKPRYKRRKIAIFFAYCGVGYQGMQKNPG 1495
            KKLKMSTTT+ DDE Y    AA   DG+   RKPRYKRRK+AIFFAYCGVGYQGMQKNPG
Sbjct: 17   KKLKMSTTTTSDDEEY----AAGAGDGSAPERKPRYKRRKVAIFFAYCGVGYQGMQKNPG 72

Query: 1494 AKTIEGDLEEALYHSGAVPEQDRGLPKRFDFARSARTDKGVSAVGQVVSGRFYVDPPGLI 1315
            AKTIEGDLEEALY +G VP+ D+  P+++++ARSARTDKGVSAVGQVVSGRFYVDPPG I
Sbjct: 73   AKTIEGDLEEALYQAGGVPDHDKCQPRKYEWARSARTDKGVSAVGQVVSGRFYVDPPGFI 132

Query: 1314 ERLNSNLSPQIRVFGFKRVTGSFNAKKFCDRRRYVYLIPVFALDPSCHRDRESVLASVGS 1135
            +RLNS L PQIR+FGFKRVT +F+AKKFCD+RRYVYL+PVFALDP  HRDRESVLAS+GS
Sbjct: 133  DRLNSILVPQIRIFGFKRVTNAFSAKKFCDKRRYVYLVPVFALDPYAHRDRESVLASLGS 192

Query: 1134 ENELVKCLECSERGRKVFGVMGKRNLHSKSDSEAVSVDSSITLNTSSLLELENDEKIVVK 955
              EL KCL C ERGRKV GVMG+R     + S  + VD+ +     +  +   D  +V++
Sbjct: 193  GKELAKCLNCPERGRKVVGVMGRRVFDPITQS-VIIVDAPVV----NANDPTTDTNMVIE 247

Query: 954  TSEXXXXXXXXXXNKFNTEPVKDLGDGAAQSDKIEEDKVDCGNVDGNLKPEKRSE---FS 784
                                       A+ S+K+EE   +    + N K E++ E   F 
Sbjct: 248  NE-------------------------ASLSEKVEERNGEVEGSNENAKMEEQVEESVFC 282

Query: 783  YGEQERERFNRILKFYEGTHNFHNFTTRTKAEDPSAKRYIISFNANTTINVEGIEFVKCE 604
            YGE+E+ERFNRILK+YEGTHNFHNFTTRTKA+DP+AKRYIISFNANT +NV+GI+FVKCE
Sbjct: 283  YGEKEKERFNRILKYYEGTHNFHNFTTRTKADDPAAKRYIISFNANTVVNVDGIDFVKCE 342

Query: 603  VIGQSFMLHQIRKLIGLAVAIMRNIAPESLIEAAFEQNVNINVPMAPEVGLYLDECFFSS 424
            V+GQSFMLHQIRK+IGLAVAIMRN APESLI  AF ++VNINVPMAPEVGLYLDECFF+S
Sbjct: 343  VVGQSFMLHQIRKMIGLAVAIMRNCAPESLIVTAFRRDVNINVPMAPEVGLYLDECFFTS 402

Query: 423  YNKKWKDSHEELSMKAYAEEAEDFKMKYIYSHIASTEHKDGVVALWLHSLNYRNYSDLRG 244
            YN KWKD+HEE+S+KAY EEAE+FKMKYIYSHIASTE K+G +A+WLHSLN+RNY DLR 
Sbjct: 403  YNSKWKDTHEEVSLKAYLEEAEEFKMKYIYSHIASTEQKEGTMAVWLHSLNHRNYPDLRA 462

Query: 243  LN 238
            ++
Sbjct: 463  VD 464


>ref|XP_006435279.1| hypothetical protein CICLE_v10000838mg [Citrus clementina]
            gi|557537401|gb|ESR48519.1| hypothetical protein
            CICLE_v10000838mg [Citrus clementina]
          Length = 526

 Score =  630 bits (1625), Expect = e-177
 Identities = 328/504 (65%), Positives = 395/504 (78%), Gaps = 19/504 (3%)
 Frame = -1

Query: 1674 KKLKMSTTTSDDDENYDKAPAAADADGTILPRKPRYKRRKIAIFFAYCGVGYQGMQKNPG 1495
            K+LKMS T++ DDE  D  PAAA AD T   ++   KRRKIAIFFAYCGVGYQGMQKNPG
Sbjct: 25   KRLKMSATSTSDDER-DLIPAAAGADSTT--KRQLCKRRKIAIFFAYCGVGYQGMQKNPG 81

Query: 1494 AKTIEGDLEEALYHSGAVPEQDRGLPKRFDFARSARTDKGVSAVGQVVSGRFYVDPPGLI 1315
            AKTIEGDLEEAL+HSGAV E+DRG P+R+D+ARSARTDKGVSAVGQVVSGRF +DPPGL+
Sbjct: 82   AKTIEGDLEEALFHSGAVSERDRGNPRRYDWARSARTDKGVSAVGQVVSGRFCIDPPGLV 141

Query: 1314 ERLNSNLSPQIRVFGFKRVTGSFNAKKFCDRRRYVYLIPVFALDPSCHRDRESVLASVGS 1135
            ERLNSNL  QIR+FG+KRVT SFNAKKFCD+RRYVYL+PVFALD S HRDRESV+AS+GS
Sbjct: 142  ERLNSNLPTQIRIFGYKRVTASFNAKKFCDQRRYVYLLPVFALDSSSHRDRESVMASLGS 201

Query: 1134 ENELVKCLECSERGRKVFGVMGKRN--LHSKSDSEAVSVDSSITLNT-----------SS 994
             NELVKCLECSERGRKV GVMGKR   L   S+ E  S++S + ++T           ++
Sbjct: 202  GNELVKCLECSERGRKVIGVMGKRTYQLGLPSNDENASLNSQVKVDTVVSTCNGDRHNTN 261

Query: 993  LLELEND----EKIVVKTSEXXXXXXXXXXNKFNTEPVKDLGDGAAQSDKIEEDKV--DC 832
            L  +E++    E ++V+ +           ++ +     +  D +   D   + KV  + 
Sbjct: 262  LESVESNKTISESVMVENANSESVNETLVESRTSETVQNENTDLSLDLDSKNDSKVMAEE 321

Query: 831  GNVDGNLKPEKRSEFSYGEQERERFNRILKFYEGTHNFHNFTTRTKAEDPSAKRYIISFN 652
             +V+G  K  K S F YGE+E++RFNRILK Y G+HNFHNFTTRTKAEDPSA+RYIISF 
Sbjct: 322  RSVNGEEKLLKGSGFCYGEEEKKRFNRILKHYVGSHNFHNFTTRTKAEDPSARRYIISFG 381

Query: 651  ANTTINVEGIEFVKCEVIGQSFMLHQIRKLIGLAVAIMRNIAPESLIEAAFEQNVNINVP 472
            A++ +NVEGI+F+KCEV+GQSFMLHQIRK+IGLAVA++RN APESLIE A +++VNINVP
Sbjct: 382  ADSVVNVEGIDFLKCEVVGQSFMLHQIRKMIGLAVAVVRNCAPESLIETALQKDVNINVP 441

Query: 471  MAPEVGLYLDECFFSSYNKKWKDSHEELSMKAYAEEAEDFKMKYIYSHIASTEHKDGVVA 292
             APEVGLYLDEC F+SYNKKWKDSHEELSMKAY EEAE+FKMK+I+SHIA TE K+GVVA
Sbjct: 442  TAPEVGLYLDECIFASYNKKWKDSHEELSMKAYEEEAENFKMKHIFSHIARTEQKEGVVA 501

Query: 291  LWLHSLNYRNYSDLRGLNSGQSTE 220
            LWLHSLNYRNY DLR L + +S +
Sbjct: 502  LWLHSLNYRNYPDLRFLGNDESAD 525


>ref|XP_010266076.1| PREDICTED: tRNA pseudouridine synthase A, mitochondrial isoform X1
            [Nelumbo nucifera]
          Length = 504

 Score =  629 bits (1621), Expect = e-177
 Identities = 323/506 (63%), Positives = 378/506 (74%), Gaps = 32/506 (6%)
 Frame = -1

Query: 1668 LKMSTTTSDDDENYDKAPAAADADGTILPRKPRYKRRKIAIFFAYCGVGYQGMQKNPGAK 1489
            +  +TTT+ DDE Y+  P +AD   T   RK RYKRRK+AIFFAYCGVGYQGMQKNPGAK
Sbjct: 1    MSSTTTTTSDDEEYEINPNSAD---TTTQRKRRYKRRKVAIFFAYCGVGYQGMQKNPGAK 57

Query: 1488 TIEGDLEEALYHSGAVPEQDRGLPKRFDFARSARTDKGVSAVGQVVSGRFYVDPPGLIER 1309
            TIEGDLEEALY SGAVPE DRG PKRFD+ARSARTDKGVSAVGQVVSGRFY+DPPGL++R
Sbjct: 58   TIEGDLEEALYLSGAVPEVDRGNPKRFDWARSARTDKGVSAVGQVVSGRFYIDPPGLVDR 117

Query: 1308 LNSNLSPQIRVFGFKRVTGSFNAKKFCDRRRYVYLIPVFALDPSCHRDRESVLASVGSEN 1129
            LNSNL  QIR+FGFKRVT SFNAKKFCDRRRYVYLIPVFALDPS HRDRESVLAS+GSEN
Sbjct: 118  LNSNLPSQIRIFGFKRVTSSFNAKKFCDRRRYVYLIPVFALDPSSHRDRESVLASLGSEN 177

Query: 1128 ELVKCLECSERGRKVFGVMGKRNLHSKSDSEAVSVDSSITLNTSSLLELENDEKIVVKTS 949
            ELVKCLECSERGRKV GVMG+RN  SK+     +  S   L + +++ + +  +  ++  
Sbjct: 178  ELVKCLECSERGRKVAGVMGRRNSESKNVENGGNDASQSGLTSDNVITVLSHSETKIEPE 237

Query: 948  EXXXXXXXXXXNKFNTEPVKDLGDGAA------QSDKI---------------------- 853
                            +P     D +A      Q+D++                      
Sbjct: 238  VSSIDAVALSNFALAVDPCLVSSDNSAAAPHPEQADQVRVSLNKFSSSLQPKLGEEPKAS 297

Query: 852  ----EEDKVDCGNVDGNLKPEKRSEFSYGEQERERFNRILKFYEGTHNFHNFTTRTKAED 685
                E++ V CGN  G     K   F YGE+E+ERFNRILK YEGTHNFHNFTTRTK ED
Sbjct: 298  WVENEQNLVRCGN--GGGAAVKGRVFCYGEKEKERFNRILKHYEGTHNFHNFTTRTKVED 355

Query: 684  PSAKRYIISFNANTTINVEGIEFVKCEVIGQSFMLHQIRKLIGLAVAIMRNIAPESLIEA 505
            PSA RYI+SF+AN  + VEGI+FVKCEV+GQSFMLHQIRK++GLAVA+MRN APESLI  
Sbjct: 356  PSANRYIVSFDANKVVTVEGIDFVKCEVVGQSFMLHQIRKMVGLAVAVMRNCAPESLINI 415

Query: 504  AFEQNVNINVPMAPEVGLYLDECFFSSYNKKWKDSHEELSMKAYAEEAEDFKMKYIYSHI 325
            A ++++NINVP APEVGLYLDEC F+SYN+KWKDSHEE+SM+AY EEAEDFK++ IY+HI
Sbjct: 416  ALQKDININVPTAPEVGLYLDECLFTSYNQKWKDSHEEISMEAYKEEAEDFKIQQIYTHI 475

Query: 324  ASTEHKDGVVALWLHSLNYRNYSDLR 247
            + TE K+GVVALWLHSLN+RNY DLR
Sbjct: 476  SFTEQKEGVVALWLHSLNHRNYPDLR 501