BLASTX nr result
ID: Forsythia21_contig00006095
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Forsythia21_contig00006095
(2309 letters)
Database: ./nr
69,698,275 sequences; 24,982,196,650 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_011086680.1| PREDICTED: RNA polymerase sigma factor sigB ... 789 0.0
ref|XP_012849681.1| PREDICTED: RNA polymerase sigma factor sigB ... 701 0.0
ref|XP_009761599.1| PREDICTED: RNA polymerase sigma factor sigB-... 698 0.0
ref|XP_009599122.1| PREDICTED: RNA polymerase sigma factor sigB-... 693 0.0
emb|CDP07629.1| unnamed protein product [Coffea canephora] 692 0.0
ref|XP_006359117.1| PREDICTED: RNA polymerase sigma factor sigB-... 689 0.0
ref|XP_010052665.1| PREDICTED: RNA polymerase sigma factor sigB ... 680 0.0
ref|XP_010661180.1| PREDICTED: RNA polymerase sigma factor sigB ... 669 0.0
ref|XP_006484754.1| PREDICTED: RNA polymerase sigma factor sigB-... 668 0.0
gb|KDO49412.1| hypothetical protein CISIN_1g007404mg [Citrus sin... 665 0.0
ref|XP_006437338.1| hypothetical protein CICLE_v10030998mg [Citr... 665 0.0
ref|XP_010278441.1| PREDICTED: RNA polymerase sigma factor sigB-... 660 0.0
gb|KHG18437.1| RNA polymerase sigma factor rpoD [Gossypium arbor... 654 0.0
ref|XP_012070322.1| PREDICTED: RNA polymerase sigma factor sigB ... 653 0.0
ref|XP_012434812.1| PREDICTED: RNA polymerase sigma factor sigB ... 652 0.0
ref|XP_010052664.1| PREDICTED: RNA polymerase sigma factor sigB ... 648 0.0
ref|XP_009792606.1| PREDICTED: RNA polymerase sigma factor sigB-... 647 0.0
ref|XP_010251515.1| PREDICTED: RNA polymerase sigma factor sigB-... 646 0.0
ref|XP_007029868.1| RNApolymerase sigma subunit 2 [Theobroma cac... 645 0.0
gb|AKC88661.1| sigma factor [Melianthus villosus] 632 e-178
>ref|XP_011086680.1| PREDICTED: RNA polymerase sigma factor sigB isoform X1 [Sesamum
indicum]
Length = 613
Score = 789 bits (2037), Expect = 0.0
Identities = 425/615 (69%), Positives = 481/615 (78%), Gaps = 12/615 (1%)
Frame = -3
Query: 2088 MSCLLPQFRCLPDTFSVNFKSQNHSAIHPSKTRDPIYFRTQCILST-------ATTTVLE 1930
MSCLLPQF+C PDTF+VNFKSQ+H++++ SK+R+ FRTQCILST ATTTVL+
Sbjct: 1 MSCLLPQFKCSPDTFAVNFKSQSHTSVYSSKSREATSFRTQCILSTTPPPTLTATTTVLD 60
Query: 1929 LEKLQLPSLEAISSSVPADRS-SKPTRT--TAVLELEKLKLPSLDVHSKSIAANRPWTYI 1759
EKLQL SLEAI + VPADRS S PT + TA+L+LE L PSLD H + AAN+PWTY+
Sbjct: 61 FEKLQLSSLEAIPNQVPADRSWSTPTSSAKTAMLDLEGL--PSLDAHPITTAANKPWTYV 118
Query: 1758 GAVGPPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVSNRTDTT 1579
GA+ PP VS+ T
Sbjct: 119 GAIAPPSEVTLGANLDTETLLTSEEAVIAAAASEALALAKAAVKVAKDAAMMVSHHKPTK 178
Query: 1578 SDCETTEIFLEVDNTLSERNQLAHFAERVDSRESKVTEIGLGENHSASYLLTESD-VEPX 1402
S+ T +F +V+ + E+NQLAH AERVD R++KV E+GLGEN+ A++ LTESD VEP
Sbjct: 179 SNSSATGMFADVNTPIFEKNQLAHLAERVDIRDAKVAEVGLGENYPAAHSLTESDDVEPS 238
Query: 1401 XXXXXXXXXXXXXSIAVRSNRQIXXXXXXXXXXXXXXANVVSVKSGSTSRKKR-VLQDID 1225
SIAVRS RQ AN+VSVKSGS+SRKKR +QD+D
Sbjct: 239 AEELEFLEAQLSKSIAVRSKRQTERRARRTRAAEKAAANIVSVKSGSSSRKKRSAVQDVD 298
Query: 1224 YSDPLRYLRGTTSSSKLLTAAEEQKLSGGIQDLLKLERLQVELTERYGDQLTFSQWAAAA 1045
YSDPLRYLRGTTSSS+LLTA+EEQ LS GIQ LLKLERLQ+ELT+RYG Q TF+QWAAAA
Sbjct: 299 YSDPLRYLRGTTSSSRLLTASEEQVLSSGIQVLLKLERLQMELTQRYGGQPTFAQWAAAA 358
Query: 1044 GVDQKTLRKRLNYGILCKDKMIKSNIRLVISIAKNYQGVGMNLQDLVQEGCRGLVRGAEK 865
GVDQKTLRK++NYGILCKDKMIKSNIRLVISIAKNYQG GMNLQDLVQEGCRGLVRGAEK
Sbjct: 359 GVDQKTLRKQINYGILCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEK 418
Query: 864 FDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLFNENGRQP 685
FDA+KGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQL++ENGR P
Sbjct: 419 FDATKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRHP 478
Query: 684 NNEEVAEATGLSMKRLNAVLLTPKAPRSLDQKIGINQNLKPSEVISDPEAETSEDLLIKE 505
++EEVAEATGLSMKRL+AV+LTPKAPRSLDQKIGINQ+LKPS+VI+DPEAET+EDLLIK+
Sbjct: 479 DDEEVAEATGLSMKRLSAVMLTPKAPRSLDQKIGINQDLKPSDVIADPEAETAEDLLIKQ 538
Query: 504 FMKQDLAKVLDTLNPREKQVIRWRFGLEDGRMKTLQEIGESMGVSRERIRQIESCAFRKL 325
FMKQDLAKVLD+LNPREKQV+ WRFGLEDGRMKTLQEIGE MGVSRERIRQIESCAFRKL
Sbjct: 539 FMKQDLAKVLDSLNPREKQVVIWRFGLEDGRMKTLQEIGELMGVSRERIRQIESCAFRKL 598
Query: 324 KNKKRTKHLQQYVMP 280
KNKKRTKHLQQYVMP
Sbjct: 599 KNKKRTKHLQQYVMP 613
>ref|XP_012849681.1| PREDICTED: RNA polymerase sigma factor sigB [Erythranthe guttatus]
gi|604314290|gb|EYU27177.1| hypothetical protein
MIMGU_mgv1a003367mg [Erythranthe guttata]
Length = 589
Score = 701 bits (1810), Expect = 0.0
Identities = 394/613 (64%), Positives = 449/613 (73%), Gaps = 11/613 (1%)
Frame = -3
Query: 2088 MSCLLPQFRCLPDTFSVNFKSQNHSAIHPSKTRDPIYFRTQCILST--------ATTTVL 1933
MSCLLPQF+C PDTF+VNFKSQ +H SK+R+ I FRTQC+LST ATTT+L
Sbjct: 1 MSCLLPQFKCSPDTFAVNFKSQTLFTVHSSKSRESINFRTQCVLSTTSPPPTMAATTTLL 60
Query: 1932 ELEKLQLPSLEAISSSVPADRS-SKPTRTTAVLELEKLKLPSLDVHSKSIAANRPWTYIG 1756
E EKLQL LE I +S+PADRS + P T++L+L+KL S +A+N+ TY+G
Sbjct: 61 EFEKLQLSPLETIPNSLPADRSWTTPRAKTSLLDLDKLT-------SLPVASNKTLTYVG 113
Query: 1755 AVGPPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVSNRTDTTS 1576
+VGPP VS T
Sbjct: 114 SVGPPSEINLGANLDKEALITSDEAVITAAASEALALAKAAVKVAKDAAMMVSLHRSTKP 173
Query: 1575 DCETTEIFLEVDNTLSERNQLAHFAERVDSRESKVTEIGLGENHSASYLLTESD--VEPX 1402
D T+ FLEVD + AERV RE+ EIG GEN ++L ESD EP
Sbjct: 174 D---TKSFLEVDTS----------AERVVVREA---EIGSGENDD--HVLGESDDSEEPS 215
Query: 1401 XXXXXXXXXXXXXSIAVRSNRQIXXXXXXXXXXXXXXANVVSVKSGSTSRKKRVLQDIDY 1222
SIAVRS RQI ANVVSVKSGS+ +K+ +Q++DY
Sbjct: 216 AEELELLDLQLSSSIAVRSKRQIERKVRRGRAAEKAAANVVSVKSGSSKKKRSPVQEVDY 275
Query: 1221 SDPLRYLRGTTSSSKLLTAAEEQKLSGGIQDLLKLERLQVELTERYGDQLTFSQWAAAAG 1042
SDPLRYLR TTSS++LLTA+EEQ LS GIQ LLKLERLQVEL ER+G + ++SQWAAAAG
Sbjct: 276 SDPLRYLRATTSSTRLLTASEEQVLSEGIQVLLKLERLQVELIERFGGEPSYSQWAAAAG 335
Query: 1041 VDQKTLRKRLNYGILCKDKMIKSNIRLVISIAKNYQGVGMNLQDLVQEGCRGLVRGAEKF 862
VDQKTLR+++NYGILCKDKMIKSNIRLVISIAKNYQG GMNLQDLVQEGCRGLVRGAEKF
Sbjct: 336 VDQKTLREQINYGILCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKF 395
Query: 861 DASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLFNENGRQPN 682
DA+KGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQL++ENGR PN
Sbjct: 396 DATKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRVPN 455
Query: 681 NEEVAEATGLSMKRLNAVLLTPKAPRSLDQKIGINQNLKPSEVISDPEAETSEDLLIKEF 502
+EEVAEATGLSMKRL+AV+LTPK PRSLDQKIG+NQ+LKPSEVISDPEAETSE+LLIK+F
Sbjct: 456 DEEVAEATGLSMKRLSAVMLTPKPPRSLDQKIGVNQDLKPSEVISDPEAETSEELLIKQF 515
Query: 501 MKQDLAKVLDTLNPREKQVIRWRFGLEDGRMKTLQEIGESMGVSRERIRQIESCAFRKLK 322
MKQDLA VLD+LNPREKQV++WRFG+EDGRMKTLQEIGE MGVSRER+RQIESCAFRKLK
Sbjct: 516 MKQDLADVLDSLNPREKQVVKWRFGIEDGRMKTLQEIGELMGVSRERVRQIESCAFRKLK 575
Query: 321 NKKRTKHLQQYVM 283
NKKRTK LQQYVM
Sbjct: 576 NKKRTKQLQQYVM 588
>ref|XP_009761599.1| PREDICTED: RNA polymerase sigma factor sigB-like [Nicotiana
sylvestris]
Length = 629
Score = 698 bits (1801), Expect = 0.0
Identities = 394/618 (63%), Positives = 444/618 (71%), Gaps = 14/618 (2%)
Frame = -3
Query: 2097 RRRMSCLLPQFRCLPDTFSVNFKSQNHSAIHPSKTRDPIYFRTQCIL-------STATTT 1939
R MS LLPQF+ LPDTF + FK+ +S I SK RD I+ RTQCIL STAT+T
Sbjct: 10 RNSMSYLLPQFKSLPDTFVLCFKTNQNSTIQLSKGRDHIHLRTQCILATTSAATSTATST 69
Query: 1938 VLELEKLQLPSLEAISSSVPADRSSKP--TRTTAVLELEKLKLPSLDVHSKSIAANRPWT 1765
VL++EKL+LPS+E +SSSV A+RS KP T T+AVL++ +LKL S + + S+A +RPWT
Sbjct: 70 VLDIEKLKLPSIEILSSSVAAERSWKPPSTATSAVLDIPRLKLLSFEANPDSVAPDRPWT 129
Query: 1764 YIGAVGPPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVSNRTD 1585
Y GAVGPP V +
Sbjct: 130 YTGAVGPPTEANTKSALATENLVTSDEAVVAAAAAEAVALAKAALKFAKDAVLLVGHNNL 189
Query: 1584 TTSDCETTEIFLEVDNTLSERNQLAHFAERVDSR---ESKVTEIGLGENHSASYLLTESD 1414
SD E T E LA +E R E K +E+ E+ LT+SD
Sbjct: 190 KNSDDAGRGTLSEARTTPFESVPLAQPSETGRVRVGAEFKGSEMKWSESSLFEDSLTDSD 249
Query: 1413 -VEPXXXXXXXXXXXXXXSIAVRSNRQIXXXXXXXXXXXXXXANVVSVKSGSTSRKKRV- 1240
+EP IAV+S RQ ANVVSVKSGSTSRKKR
Sbjct: 250 DLEPSPEELEILQSQLSNVIAVKSTRQTERKARRGRAAERAAANVVSVKSGSTSRKKRTS 309
Query: 1239 LQDIDYSDPLRYLRGTTSSSKLLTAAEEQKLSGGIQDLLKLERLQVELTERYGDQLTFSQ 1060
+Q++DYSDPLRYLRGTT SS+LLTA+EEQ+LS GIQDLLKLERL+ EL R G Q T +Q
Sbjct: 310 VQEVDYSDPLRYLRGTTGSSRLLTASEEQELSRGIQDLLKLERLEQELAARCGGQPTIAQ 369
Query: 1059 WAAAAGVDQKTLRKRLNYGILCKDKMIKSNIRLVISIAKNYQGVGMNLQDLVQEGCRGLV 880
WAAAAGV+QKTLRKRLNYGILCKDKMIKSNIRLVISIAKNYQGVGMNLQDLVQEGCRGLV
Sbjct: 370 WAAAAGVEQKTLRKRLNYGILCKDKMIKSNIRLVISIAKNYQGVGMNLQDLVQEGCRGLV 429
Query: 879 RGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLFNE 700
RGAEKFDA+KGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLF E
Sbjct: 430 RGAEKFDAAKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLFTE 489
Query: 699 NGRQPNNEEVAEATGLSMKRLNAVLLTPKAPRSLDQKIGINQNLKPSEVISDPEAETSED 520
NGR PN+EEVAEATGLSMKRL AV+LTPKAPRSLDQKIG NQ+LKPSEVI+DPEAETSE+
Sbjct: 490 NGRLPNDEEVAEATGLSMKRLTAVMLTPKAPRSLDQKIGFNQSLKPSEVIADPEAETSEE 549
Query: 519 LLIKEFMKQDLAKVLDTLNPREKQVIRWRFGLEDGRMKTLQEIGESMGVSRERIRQIESC 340
+L+K+FM+QDL KVLDTLNPREKQV++WRFGL DGRMKTLQEIGE MGVSRERIRQIESC
Sbjct: 550 MLMKQFMRQDLEKVLDTLNPREKQVVKWRFGLADGRMKTLQEIGELMGVSRERIRQIESC 609
Query: 339 AFRKLKNKKRTKHLQQYV 286
AFRKLKNKKRTK LQQY+
Sbjct: 610 AFRKLKNKKRTKFLQQYI 627
>ref|XP_009599122.1| PREDICTED: RNA polymerase sigma factor sigB-like [Nicotiana
tomentosiformis]
Length = 641
Score = 693 bits (1789), Expect = 0.0
Identities = 393/629 (62%), Positives = 450/629 (71%), Gaps = 14/629 (2%)
Frame = -3
Query: 2130 IICIYVCRLTYRRRMSCLLPQFRCLPDTFSVNFKSQNHSAIHPSKTRDPIYFRTQCIL-- 1957
+I +Y R+ R MS LLPQF+ LPDTF + FK+ +S I SK RD I+ RTQCIL
Sbjct: 13 LIPVYDFRV--ERNMSYLLPQFKSLPDTFVLCFKTNQNSTIQLSKGRDHIHLRTQCILAT 70
Query: 1956 -----STATTTVLELEKLQLPSLEAISSSVPADRSSKP--TRTTAVLELEKLKLPSLDVH 1798
STAT+TVL++EKL+LPS+E +SSSV A+RS KP T T+AVL++ +LKL S + +
Sbjct: 71 TSAATSTATSTVLDIEKLKLPSIEILSSSVAAERSWKPPSTATSAVLDIPRLKLLSFEAN 130
Query: 1797 SKSIAANRPWTYIGAVGPPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 1618
S+A +RPWTY G VGPP
Sbjct: 131 PDSVAPDRPWTYTGPVGPPTEANTKSVLATENLVTSDEAVVAAAAAEAVALAKAALKFAK 190
Query: 1617 XXXXXVSNRTDTTSDCETTEIFLEVDNTLSERNQLAHFAE--RVD-SRESKVTEIGLGEN 1447
V + SD E T E LA +E RV E K +E+ E+
Sbjct: 191 DVVLLVGHNNLKNSDDAGRGTLSEARTTPFESVHLAQPSETGRVGVGAEFKGSEMKWSES 250
Query: 1446 HSASYLLTESD-VEPXXXXXXXXXXXXXXSIAVRSNRQIXXXXXXXXXXXXXXANVVSVK 1270
LT+SD ++P IAV+S RQ ANVVSVK
Sbjct: 251 SLLEDSLTDSDDLDPSPEELEILQSQLSNVIAVKSTRQTERKARRGRAAERAAANVVSVK 310
Query: 1269 SGSTSRKKRV-LQDIDYSDPLRYLRGTTSSSKLLTAAEEQKLSGGIQDLLKLERLQVELT 1093
SGSTSRKKR +Q++DYSDPLRYLRGTT SS+LLTA+EEQ+LS GIQD LKLERL+ EL
Sbjct: 311 SGSTSRKKRTSVQEVDYSDPLRYLRGTTGSSRLLTASEEQELSRGIQDQLKLERLEQELA 370
Query: 1092 ERYGDQLTFSQWAAAAGVDQKTLRKRLNYGILCKDKMIKSNIRLVISIAKNYQGVGMNLQ 913
+R G Q T +QWAAAAGV+QKTLRKRLNYGILCKDKMIKSN+RLVISIAKNYQGVGMNLQ
Sbjct: 371 DRCGGQPTIAQWAAAAGVEQKTLRKRLNYGILCKDKMIKSNVRLVISIAKNYQGVGMNLQ 430
Query: 912 DLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYR 733
DLVQEGCRGLVRGAEKFDA+KGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYR
Sbjct: 431 DLVQEGCRGLVRGAEKFDAAKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYR 490
Query: 732 VKEARKQLFNENGRQPNNEEVAEATGLSMKRLNAVLLTPKAPRSLDQKIGINQNLKPSEV 553
VKEARKQLF ENGR PN+EEVAEATGLSMKRL AV+LTPKAPRSLDQKIG NQ+LKPSEV
Sbjct: 491 VKEARKQLFTENGRLPNDEEVAEATGLSMKRLTAVMLTPKAPRSLDQKIGFNQSLKPSEV 550
Query: 552 ISDPEAETSEDLLIKEFMKQDLAKVLDTLNPREKQVIRWRFGLEDGRMKTLQEIGESMGV 373
I+DPEAETSE++L+K+FM+QDL +VLDTLNPREKQV++WRFGL DGRMKTLQEIGE MGV
Sbjct: 551 IADPEAETSEEMLMKQFMRQDLERVLDTLNPREKQVVKWRFGLADGRMKTLQEIGELMGV 610
Query: 372 SRERIRQIESCAFRKLKNKKRTKHLQQYV 286
SRERIRQIESCAFRKLKNKKRTK LQQY+
Sbjct: 611 SRERIRQIESCAFRKLKNKKRTKFLQQYI 639
>emb|CDP07629.1| unnamed protein product [Coffea canephora]
Length = 615
Score = 692 bits (1786), Expect = 0.0
Identities = 388/614 (63%), Positives = 439/614 (71%), Gaps = 12/614 (1%)
Frame = -3
Query: 2088 MSCLLPQFRCLPDTFSVNFKSQNHSAIHPSKTRDPIYFRTQCILST------ATTTVLEL 1927
MSCLLPQFRCLPD F V FKS HSA SK RDPI+ RTQCILST A +TVL++
Sbjct: 1 MSCLLPQFRCLPDAFGVAFKSHQHSAPQLSKNRDPIHVRTQCILSTTSAPTSAASTVLDI 60
Query: 1926 EKLQLPSLEAISSSVPAD--RSSKPTRTTAVLELEKLKLPSLDVHSKSIAANRPWTYIGA 1753
EKL+L SLEA S+SV ++ K AVL +EKLKL SL+ HS S+ ANRPWTY G
Sbjct: 61 EKLRLLSLEANSNSVSDGSWKAPKSPAMAAVLVMEKLKLISLEAHSDSVTANRPWTYNGP 120
Query: 1752 VGPPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVSNRTDTTSD 1573
V V + T +
Sbjct: 121 VDSAIKPNLGATLATESLIANEEAVIAAAAAEAVALAKAALKVAKDAAMMVDHGNLTEPE 180
Query: 1572 CETTEIFLEVDNTLSERNQLAHFAERVDS-RESKVTEIGLGENHSASYLLTESD-VEPXX 1399
+ + E + LS R L +RV + E + + LGENHS Y TESD +EP
Sbjct: 181 SKAMDTLSESSDVLSNRALLGQLEKRVSTIGEINIAGVELGENHSIWYPFTESDDMEPTN 240
Query: 1398 XXXXXXXXXXXXSIAVRSNRQIXXXXXXXXXXXXXXANVVSVKS-GSTSRKKRV-LQDID 1225
++AVRS RQ A+ VSVKS GSTSRKKR +Q+ID
Sbjct: 241 EELELLQEQLLNNVAVRSKRQKERKARRARAAERAAASAVSVKSSGSTSRKKRSSIQEID 300
Query: 1224 YSDPLRYLRGTTSSSKLLTAAEEQKLSGGIQDLLKLERLQVELTERYGDQLTFSQWAAAA 1045
YSDPLRYLRGT ++S+LLTA+EEQ+LS GIQDLLKLE L EL +R G + TF+QWAAAA
Sbjct: 301 YSDPLRYLRGTATTSRLLTASEEQELSEGIQDLLKLETLHEELAQRCGAEPTFAQWAAAA 360
Query: 1044 GVDQKTLRKRLNYGILCKDKMIKSNIRLVISIAKNYQGVGMNLQDLVQEGCRGLVRGAEK 865
GVDQKTLRKRLNYG L KDKMI SNIRLVISIA+NYQG GMNLQDLVQEGCRGLVRGAEK
Sbjct: 361 GVDQKTLRKRLNYGTLSKDKMIMSNIRLVISIARNYQGAGMNLQDLVQEGCRGLVRGAEK 420
Query: 864 FDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLFNENGRQP 685
FDA KGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEA+KQL++ENGR P
Sbjct: 421 FDAKKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEAKKQLYSENGRHP 480
Query: 684 NNEEVAEATGLSMKRLNAVLLTPKAPRSLDQKIGINQNLKPSEVISDPEAETSEDLLIKE 505
++EEVAEA GLSMKRL+AV+LTPKAP+SLDQKIGINQNLKPSEVI+DPEAETSEDLL+K
Sbjct: 481 DDEEVAEAAGLSMKRLSAVMLTPKAPKSLDQKIGINQNLKPSEVIADPEAETSEDLLVKR 540
Query: 504 FMKQDLAKVLDTLNPREKQVIRWRFGLEDGRMKTLQEIGESMGVSRERIRQIESCAFRKL 325
FM+QDL KVL+TLNPRE+QVIRWRFGL DGRMKTLQEIGE MGVSRERIRQIESCAFRKL
Sbjct: 541 FMRQDLEKVLNTLNPRERQVIRWRFGLGDGRMKTLQEIGELMGVSRERIRQIESCAFRKL 600
Query: 324 KNKKRTKHLQQYVM 283
KNK+RTKHLQQY++
Sbjct: 601 KNKRRTKHLQQYLL 614
>ref|XP_006359117.1| PREDICTED: RNA polymerase sigma factor sigB-like [Solanum tuberosum]
Length = 613
Score = 689 bits (1777), Expect = 0.0
Identities = 386/616 (62%), Positives = 433/616 (70%), Gaps = 15/616 (2%)
Frame = -3
Query: 2088 MSCLLPQFRCLPDTFSVNFKSQNHSAIHPSKTRDPIYFRTQCILST-------ATTTVLE 1930
MS LLPQF LPD F + K+Q + I SK+RD I+ RTQCILST AT+TVL
Sbjct: 1 MSYLLPQFLSLPDAFVICAKTQQQTTIQLSKSRDHIHLRTQCILSTTSAVTSTATSTVLG 60
Query: 1929 LEKLQLPSLEAISSSVPADRS--SKPTRTTAVLELEKLKLPSLDVHSKSIAANRPWTYIG 1756
+EKLQLPS+E +S+SV A+RS S TT V +++KLKLPS + + S+A +RPWTY G
Sbjct: 61 IEKLQLPSIEILSNSVAAERSWKSPSAATTTVPDIQKLKLPSFEANPDSVAPDRPWTYTG 120
Query: 1755 AVGPPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVSNRTD--- 1585
AVGPP N +D
Sbjct: 121 AVGPPAEANTKPENSLASEEAIVAAAAAEAVALAKAALKGAQDAVMLVGYNNLNDSDNVG 180
Query: 1584 --TTSDCETTEIFLEVDNTLSERNQLAHFAERVDSRESKVTEIGLGENHSASYLLTESDV 1411
T S+ T F V + ++ E K T G + L D+
Sbjct: 181 RGTLSEARTAP-FESVHLAQPGETRRVGVCAELNGSEMKWT----GSSLFRETLTDSDDL 235
Query: 1410 EPXXXXXXXXXXXXXXSIAVRSNRQIXXXXXXXXXXXXXXANVVSVKSGSTSRKKRV-LQ 1234
EP IAV+SNRQ ANVV+VKSGSTSRKKR +Q
Sbjct: 236 EPSPEELEILQSQLSNVIAVKSNRQTERKAKRAKSVEKAAANVVTVKSGSTSRKKRASVQ 295
Query: 1233 DIDYSDPLRYLRGTTSSSKLLTAAEEQKLSGGIQDLLKLERLQVELTERYGDQLTFSQWA 1054
D+DYSDPLRYLRGTT SS+LLTA+EEQ+LS GIQDLLKLERLQVELTER G Q TF+QWA
Sbjct: 296 DVDYSDPLRYLRGTTCSSRLLTASEEQELSRGIQDLLKLERLQVELTERCGGQPTFTQWA 355
Query: 1053 AAAGVDQKTLRKRLNYGILCKDKMIKSNIRLVISIAKNYQGVGMNLQDLVQEGCRGLVRG 874
AAAGVDQ TLRKRLNYGILCKDKMIKSN+RLVISIAKNYQGVGMNLQDLVQEGCRGLVRG
Sbjct: 356 AAAGVDQMTLRKRLNYGILCKDKMIKSNVRLVISIAKNYQGVGMNLQDLVQEGCRGLVRG 415
Query: 873 AEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLFNENG 694
AEKFDA+KGFKFSTYAHWWIKQAVRKSLSDQSR IRLPFHMVEATYRVKEARKQL ENG
Sbjct: 416 AEKFDATKGFKFSTYAHWWIKQAVRKSLSDQSRMIRLPFHMVEATYRVKEARKQLLTENG 475
Query: 693 RQPNNEEVAEATGLSMKRLNAVLLTPKAPRSLDQKIGINQNLKPSEVISDPEAETSEDLL 514
R PN+ EVAEA GLSMKRL AV+LTPKAPRSLDQKIG N++LKPSEV++DPEAETSE++L
Sbjct: 476 RHPNDAEVAEAAGLSMKRLAAVMLTPKAPRSLDQKIGFNESLKPSEVLADPEAETSEEIL 535
Query: 513 IKEFMKQDLAKVLDTLNPREKQVIRWRFGLEDGRMKTLQEIGESMGVSRERIRQIESCAF 334
K+FM+QDL KVLDTLNPREKQV+RWRFGLEDGRMKTLQEIGE MGVSRERIRQIESCAF
Sbjct: 536 TKQFMRQDLEKVLDTLNPREKQVVRWRFGLEDGRMKTLQEIGELMGVSRERIRQIESCAF 595
Query: 333 RKLKNKKRTKHLQQYV 286
RKLKNKKRTK LQQY+
Sbjct: 596 RKLKNKKRTKFLQQYI 611
>ref|XP_010052665.1| PREDICTED: RNA polymerase sigma factor sigB isoform X2 [Eucalyptus
grandis] gi|629111779|gb|KCW76739.1| hypothetical protein
EUGRSUZ_D01094 [Eucalyptus grandis]
Length = 588
Score = 680 bits (1754), Expect = 0.0
Identities = 377/607 (62%), Positives = 420/607 (69%), Gaps = 2/607 (0%)
Frame = -3
Query: 2097 RRRMSCLLPQFRCLPDTFSVNFKSQNHSAIHPSKTRDPIYFRTQCILSTATTTVLELEKL 1918
+R SCLLPQF+C PDTFS+ F++ H K R+ YFR QC+LS + + L
Sbjct: 11 QRMSSCLLPQFKCQPDTFSIQFRT------HAQKNRETTYFRAQCLLSATSPSTLS---- 60
Query: 1917 QLPSLEAISSSVPADRSSKPTRTTAVLELEKLKLPSLDVHSKSIAANRPWTYIGAVGPPX 1738
T VL++EKL+LPSL+V + S +NRPWTY GAVGPP
Sbjct: 61 -------------------SAATAVVLDMEKLRLPSLEVLTDSPTSNRPWTYTGAVGPPA 101
Query: 1737 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVSNRTDTTSDCETTE 1558
+ N + + D E
Sbjct: 102 EVNLGATLATETLLTSDEAVIAAAASEAVTLAKAALKSAKHAALMIRNESSSNID-NKLE 160
Query: 1557 IFLEVDNTLSERNQLAHFAERVDSRESKVTEIGLGENHSASYLLTES-DVEPXXXXXXXX 1381
+ +LS+ +L E E GL E + Y +S D+EP
Sbjct: 161 LSSRTSTSLSKHAELLELEHSNILTELMEPEGGLREGNVMQYSTDKSEDLEPTHEELQLL 220
Query: 1380 XXXXXXSIAVRSNRQIXXXXXXXXXXXXXXANVVSVKSGSTSRKKRV-LQDIDYSDPLRY 1204
SIAVRS RQ ANVVSVKSGS S+KKR LQ++DYSDPLRY
Sbjct: 221 QVQLFKSIAVRSRRQTERKEIRERAAEKAAANVVSVKSGSLSKKKRAALQEVDYSDPLRY 280
Query: 1203 LRGTTSSSKLLTAAEEQKLSGGIQDLLKLERLQVELTERYGDQLTFSQWAAAAGVDQKTL 1024
LRGTTSSS+LLTA EE +LS GIQDLLKLERLQVELTER G + F+QWAAAAGVDQKTL
Sbjct: 281 LRGTTSSSRLLTATEETELSEGIQDLLKLERLQVELTERCGGEPAFAQWAAAAGVDQKTL 340
Query: 1023 RKRLNYGILCKDKMIKSNIRLVISIAKNYQGVGMNLQDLVQEGCRGLVRGAEKFDASKGF 844
RKRLNYG LCKDKMIKSNIRLVISIAKNYQG GMNLQDLVQEGCRGLVRG EKFDASKGF
Sbjct: 341 RKRLNYGRLCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGCEKFDASKGF 400
Query: 843 KFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLFNENGRQPNNEEVAE 664
KFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQL++ENGRQP+NEEVAE
Sbjct: 401 KFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRQPDNEEVAE 460
Query: 663 ATGLSMKRLNAVLLTPKAPRSLDQKIGINQNLKPSEVISDPEAETSEDLLIKEFMKQDLA 484
ATGLSMKRLNAVL+TPKAPRSLDQKIGINQNLKPSEVI+DP AETSED+L+K+FM+QDL
Sbjct: 461 ATGLSMKRLNAVLMTPKAPRSLDQKIGINQNLKPSEVIADPNAETSEDVLLKQFMRQDLE 520
Query: 483 KVLDTLNPREKQVIRWRFGLEDGRMKTLQEIGESMGVSRERIRQIESCAFRKLKNKKRTK 304
KVLDTLNPREKQV+RWRFGLEDGRMKTLQEIGE MGVSRERIRQIESCAFRKLKNKKRTK
Sbjct: 521 KVLDTLNPREKQVVRWRFGLEDGRMKTLQEIGELMGVSRERIRQIESCAFRKLKNKKRTK 580
Query: 303 HLQQYVM 283
HLQQYV+
Sbjct: 581 HLQQYVL 587
>ref|XP_010661180.1| PREDICTED: RNA polymerase sigma factor sigB [Vitis vinifera]
gi|296090195|emb|CBI40014.3| unnamed protein product
[Vitis vinifera]
Length = 575
Score = 669 bits (1726), Expect = 0.0
Identities = 376/606 (62%), Positives = 426/606 (70%), Gaps = 4/606 (0%)
Frame = -3
Query: 2088 MSCLLPQFRCLPDTFSVNFKSQNHSAIHP-SKTRDPIYFRTQCILSTATTTVLELEKLQL 1912
MSCLLPQF+C PDTFS H +H SK R+ IYFR QC LST +
Sbjct: 1 MSCLLPQFKCPPDTFST------HPKLHILSKNREAIYFRVQCALSTTS----------- 43
Query: 1911 PSLEAISSSVPADRSSKPTRTTAVLELEKLKLPSLDVHSKSIAANRPWTYIGAVGPPXXX 1732
P L T TTAVL++EKL+LPSL+ HS S+AA+RPWTYIG VGPP
Sbjct: 44 PPLS--------------TSTTAVLDIEKLRLPSLESHSNSVAAHRPWTYIGVVGPPTEA 89
Query: 1731 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVSNRTDTTSDCETTEIF 1552
V S+ + F
Sbjct: 90 NFEATLARETLLTSEEAVIAAAAAEAVALAKAAVKVAKDAARLVGKNNSAKSETKPAS-F 148
Query: 1551 LEVDNTLSERNQLAHFAERVDSRESKV-TEIGLGENHSASYLLTESD-VEPXXXXXXXXX 1378
L D+T R ER+ V E G+ + +S + +SD +EP
Sbjct: 149 LSGDDTSQFRRIQFTETERIGILGDSVGAETGMVDYNSLQDVTEDSDDLEPTLEELELLE 208
Query: 1377 XXXXXSIAVRSNRQIXXXXXXXXXXXXXXANVVSVKSGSTSRKKRV-LQDIDYSDPLRYL 1201
SI VRSNRQ+ A VVSV+SGSTSR+KRV LQ++DYSDPLRYL
Sbjct: 209 AEFSKSIVVRSNRQVERKARRARAAEKASAGVVSVRSGSTSRRKRVSLQEVDYSDPLRYL 268
Query: 1200 RGTTSSSKLLTAAEEQKLSGGIQDLLKLERLQVELTERYGDQLTFSQWAAAAGVDQKTLR 1021
RGTTS+S+LLTA EE +LS GIQDLLKLE+LQ +L ER+G + TF+QWAAAAGVDQKTLR
Sbjct: 269 RGTTSTSRLLTATEELELSEGIQDLLKLEKLQEDLEERFGVKPTFAQWAAAAGVDQKTLR 328
Query: 1020 KRLNYGILCKDKMIKSNIRLVISIAKNYQGVGMNLQDLVQEGCRGLVRGAEKFDASKGFK 841
+R NYGI CKDKMIKSNIRLVISIAKNYQG GMN+QDLVQEGCRGLVRGAEKFDASKGFK
Sbjct: 329 RRTNYGIRCKDKMIKSNIRLVISIAKNYQGAGMNIQDLVQEGCRGLVRGAEKFDASKGFK 388
Query: 840 FSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLFNENGRQPNNEEVAEA 661
FSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQL++ENGR PNNEEVAEA
Sbjct: 389 FSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRHPNNEEVAEA 448
Query: 660 TGLSMKRLNAVLLTPKAPRSLDQKIGINQNLKPSEVISDPEAETSEDLLIKEFMKQDLAK 481
TGLSMKRLNAVLLTPKAPRSLDQKIGINQNLKPSEVI+DP+AET+E+LLIK+FM++DL K
Sbjct: 449 TGLSMKRLNAVLLTPKAPRSLDQKIGINQNLKPSEVIADPDAETAEELLIKQFMREDLEK 508
Query: 480 VLDTLNPREKQVIRWRFGLEDGRMKTLQEIGESMGVSRERIRQIESCAFRKLKNKKRTKH 301
VL++LNPREKQVIRWR+GLEDGR KTLQEIGE MGVSRERIRQIESCAFRKLKNK+RTKH
Sbjct: 509 VLNSLNPREKQVIRWRYGLEDGRTKTLQEIGELMGVSRERIRQIESCAFRKLKNKRRTKH 568
Query: 300 LQQYVM 283
LQQY++
Sbjct: 569 LQQYLV 574
>ref|XP_006484754.1| PREDICTED: RNA polymerase sigma factor sigB-like isoform X1 [Citrus
sinensis]
Length = 605
Score = 668 bits (1723), Expect = 0.0
Identities = 373/613 (60%), Positives = 423/613 (69%), Gaps = 6/613 (0%)
Frame = -3
Query: 2103 TYRRRMSCLLPQFRCLPDTFSVNFKS----QNHSAIHPSKTRDPIYFRTQCILSTATTTV 1936
++ + MSCLLPQF+C PDTFS++F++ Q+HS+ HPSK+++PI FRT C+LST +
Sbjct: 19 SFNKNMSCLLPQFKCQPDTFSIHFRTLHNHQHHSS-HPSKSKEPICFRTHCVLSTTSP-- 75
Query: 1935 LELEKLQLPSLEAISSSVPADRSSKPTRTTAVLELEKLKLPSLDVHSKSIAANRPWTYIG 1756
S T T VL++EKL+LPSL+ HS ++AANR WTY G
Sbjct: 76 -----------------------STSTAMTTVLDVEKLRLPSLEAHSNAVAANRQWTYFG 112
Query: 1755 AVGPPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVSNRTDTTS 1576
AVGP N ++
Sbjct: 113 AVGPSTEENLGTSLATETLTSDEAVIAAASAEAVALARAAVKVAKDAALMV--NHHNSAK 170
Query: 1575 DCETTEIFLEVDNTLSERNQLAHFAERVDSRESKVTEIGLGENHSASYLLTES-DVEPXX 1399
I L D S QL +S + E E +S L +S D+EP
Sbjct: 171 PKSKPAISLSADTNTSMWAQLTERERASIIGDSVIVEAAPEEEYSEQQPLNKSADLEPTH 230
Query: 1398 XXXXXXXXXXXXSIAVRSNRQIXXXXXXXXXXXXXXANVVSVKSGSTSRKKRV-LQDIDY 1222
SIAVRS RQ ANV+SVKSGSTSR+KR +Q++DY
Sbjct: 231 EELKLLEEQVSQSIAVRSRRQTERKARRTRAAEKAAANVMSVKSGSTSRRKRPSVQEVDY 290
Query: 1221 SDPLRYLRGTTSSSKLLTAAEEQKLSGGIQDLLKLERLQVELTERYGDQLTFSQWAAAAG 1042
SDPLRYLR TTSSS+LLTA EE +LS GIQDLLKLE L+ L+ER G TF+QWAAAAG
Sbjct: 291 SDPLRYLRATTSSSRLLTANEEMQLSAGIQDLLKLEGLREVLSERCGGSPTFAQWAAAAG 350
Query: 1041 VDQKTLRKRLNYGILCKDKMIKSNIRLVISIAKNYQGVGMNLQDLVQEGCRGLVRGAEKF 862
VDQ+ LR+RLNYGILCKDKMI SNIRLVISIAKNYQG GMNLQDLVQEGCRGLVRGAEKF
Sbjct: 351 VDQRELRRRLNYGILCKDKMITSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKF 410
Query: 861 DASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLFNENGRQPN 682
DASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQL++ENGR PN
Sbjct: 411 DASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRHPN 470
Query: 681 NEEVAEATGLSMKRLNAVLLTPKAPRSLDQKIGINQNLKPSEVISDPEAETSEDLLIKEF 502
NEEVAEATGLSMKRL+AVLLTPKAPRSLDQK GINQNLKPSEVI+DPEAET+EDLLIK+F
Sbjct: 471 NEEVAEATGLSMKRLHAVLLTPKAPRSLDQKFGINQNLKPSEVIADPEAETAEDLLIKKF 530
Query: 501 MKQDLAKVLDTLNPREKQVIRWRFGLEDGRMKTLQEIGESMGVSRERIRQIESCAFRKLK 322
MK+DL KVLDTLNPRE+QV+RWRFGLEDGRMKTLQEIGE MGVSRERIRQIES AFRKLK
Sbjct: 531 MKEDLEKVLDTLNPRERQVVRWRFGLEDGRMKTLQEIGELMGVSRERIRQIESSAFRKLK 590
Query: 321 NKKRTKHLQQYVM 283
NKKRTKHL QY +
Sbjct: 591 NKKRTKHLMQYAI 603
>gb|KDO49412.1| hypothetical protein CISIN_1g007404mg [Citrus sinensis]
Length = 605
Score = 665 bits (1717), Expect = 0.0
Identities = 372/613 (60%), Positives = 423/613 (69%), Gaps = 6/613 (0%)
Frame = -3
Query: 2103 TYRRRMSCLLPQFRCLPDTFSVNFKS----QNHSAIHPSKTRDPIYFRTQCILSTATTTV 1936
++ + MSCLLPQF+C PDTFS++F++ Q+HS+ HPSK+++PI FRT C+LST +
Sbjct: 19 SFNKNMSCLLPQFKCQPDTFSIHFRTLHNHQHHSS-HPSKSKEPICFRTHCVLSTTSP-- 75
Query: 1935 LELEKLQLPSLEAISSSVPADRSSKPTRTTAVLELEKLKLPSLDVHSKSIAANRPWTYIG 1756
S T T VL++EKL+LPSL+ HS ++AANR WTY G
Sbjct: 76 -----------------------STSTAMTTVLDVEKLRLPSLEAHSNAVAANRQWTYFG 112
Query: 1755 AVGPPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVSNRTDTTS 1576
AVGP N ++
Sbjct: 113 AVGPSTEENLGTSLATETLTSDEAVIAAASAEAVALARAAVKVAKDAALMV--NHHNSAK 170
Query: 1575 DCETTEIFLEVDNTLSERNQLAHFAERVDSRESKVTEIGLGENHSASYLLTES-DVEPXX 1399
I D S QL +S + E E +S L +S D+EP
Sbjct: 171 PKSKPAISSSADTNTSMWAQLTERERASIIGDSVIVEAAPEEEYSEQQPLNKSADLEPTH 230
Query: 1398 XXXXXXXXXXXXSIAVRSNRQIXXXXXXXXXXXXXXANVVSVKSGSTSRKKRV-LQDIDY 1222
SIAVRS RQ ANV+SVKSGSTSR+KR +Q++DY
Sbjct: 231 EELKLLEEQVSQSIAVRSRRQTERKARRTRAAEKAAANVMSVKSGSTSRRKRPSVQEVDY 290
Query: 1221 SDPLRYLRGTTSSSKLLTAAEEQKLSGGIQDLLKLERLQVELTERYGDQLTFSQWAAAAG 1042
SDPLRYLR TTSSS+LLTA EE +LS GIQDLLKLE L+ L+ER G TF+QWAAAAG
Sbjct: 291 SDPLRYLRATTSSSRLLTANEEMQLSAGIQDLLKLEGLREVLSERCGGSPTFAQWAAAAG 350
Query: 1041 VDQKTLRKRLNYGILCKDKMIKSNIRLVISIAKNYQGVGMNLQDLVQEGCRGLVRGAEKF 862
VDQ+ LR+RLNYGILCKDKMI SNIRLVISIAKNYQG GMNLQDLVQEGCRGLVRGAEKF
Sbjct: 351 VDQRELRRRLNYGILCKDKMITSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKF 410
Query: 861 DASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLFNENGRQPN 682
DASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQL++ENGR PN
Sbjct: 411 DASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRHPN 470
Query: 681 NEEVAEATGLSMKRLNAVLLTPKAPRSLDQKIGINQNLKPSEVISDPEAETSEDLLIKEF 502
NEEVAEATGLSMKRL+AVLL+PKAPRSLDQKIGINQNLKPSEVI+DPEAET+EDLLIK+F
Sbjct: 471 NEEVAEATGLSMKRLHAVLLSPKAPRSLDQKIGINQNLKPSEVIADPEAETAEDLLIKKF 530
Query: 501 MKQDLAKVLDTLNPREKQVIRWRFGLEDGRMKTLQEIGESMGVSRERIRQIESCAFRKLK 322
MK+DL KVLDTLNPRE+QV+RWRFGLEDGRMKTLQEIGE MGVSRERIRQIES AFRKLK
Sbjct: 531 MKEDLEKVLDTLNPRERQVVRWRFGLEDGRMKTLQEIGELMGVSRERIRQIESSAFRKLK 590
Query: 321 NKKRTKHLQQYVM 283
NKKRTKHL QY +
Sbjct: 591 NKKRTKHLMQYAI 603
>ref|XP_006437338.1| hypothetical protein CICLE_v10030998mg [Citrus clementina]
gi|557539534|gb|ESR50578.1| hypothetical protein
CICLE_v10030998mg [Citrus clementina]
Length = 605
Score = 665 bits (1715), Expect = 0.0
Identities = 372/628 (59%), Positives = 429/628 (68%), Gaps = 6/628 (0%)
Frame = -3
Query: 2148 IACSQVIICIYVCRLTYRRRMSCLLPQFRCLPDTFSVNFKS----QNHSAIHPSKTRDPI 1981
+A + V+ + ++ + MSCLLPQF+C PDTFS++F++ Q+HS+ HPSK+++PI
Sbjct: 4 VAAAGVVKETQISTSSFNKNMSCLLPQFKCQPDTFSIHFRTLHNHQHHSS-HPSKSKEPI 62
Query: 1980 YFRTQCILSTATTTVLELEKLQLPSLEAISSSVPADRSSKPTRTTAVLELEKLKLPSLDV 1801
FRT C+LST + S T T VL++EKL+LPSL+
Sbjct: 63 CFRTHCVLSTTSP-------------------------STSTAMTTVLDVEKLRLPSLEA 97
Query: 1800 HSKSIAANRPWTYIGAVGPPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 1621
HS ++AANR WTY GAVGP
Sbjct: 98 HSNAVAANRQWTYFGAVGPSTEENLGTSLATETLTSDEAVIAAASAEAVALARAAVKVAK 157
Query: 1620 XXXXXXVSNRTDTTSDCETTEIFLEVDNTLSERNQLAHFAERVDSRESKVTEIGLGENHS 1441
N ++ I L D + S QL +S + E E +S
Sbjct: 158 DAALMV--NHHNSAKPKSKPAISLSADTSTSMWAQLTERERASIIGDSVIVEAAPEEEYS 215
Query: 1440 ASYLLTES-DVEPXXXXXXXXXXXXXXSIAVRSNRQIXXXXXXXXXXXXXXANVVSVKSG 1264
L +S D+EP SIAVRS RQ ANV+SVKSG
Sbjct: 216 EQQPLNKSADLEPTHEELKLLEEQVSQSIAVRSRRQTERKARRTRAAEKAAANVMSVKSG 275
Query: 1263 STSRKKRV-LQDIDYSDPLRYLRGTTSSSKLLTAAEEQKLSGGIQDLLKLERLQVELTER 1087
ST+R+KR +Q++DYSDPLRYLR TTSSS+LLTA EE +LS GIQDLLKLE L+ L+ER
Sbjct: 276 STTRRKRPSVQEVDYSDPLRYLRATTSSSRLLTANEEMQLSAGIQDLLKLEGLREVLSER 335
Query: 1086 YGDQLTFSQWAAAAGVDQKTLRKRLNYGILCKDKMIKSNIRLVISIAKNYQGVGMNLQDL 907
G TF+QWAAAAGVDQ+ LR+RLNYGILCKDKMI SNIRLVISIAKNYQG GMNLQDL
Sbjct: 336 CGGSPTFAQWAAAAGVDQRELRRRLNYGILCKDKMITSNIRLVISIAKNYQGAGMNLQDL 395
Query: 906 VQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVK 727
VQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVK
Sbjct: 396 VQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVK 455
Query: 726 EARKQLFNENGRQPNNEEVAEATGLSMKRLNAVLLTPKAPRSLDQKIGINQNLKPSEVIS 547
EARKQL++ENGR PNNEEVA+ATGLSMKRL+AVLL PKAPRSLDQK GINQNLKPSEVI+
Sbjct: 456 EARKQLYSENGRHPNNEEVAKATGLSMKRLHAVLLAPKAPRSLDQKFGINQNLKPSEVIA 515
Query: 546 DPEAETSEDLLIKEFMKQDLAKVLDTLNPREKQVIRWRFGLEDGRMKTLQEIGESMGVSR 367
DPEAET+EDLLIK+FMK+DL KVLDTLNPRE+QV+RWRFGLEDGRMKTLQEIGE MGVSR
Sbjct: 516 DPEAETAEDLLIKKFMKEDLEKVLDTLNPRERQVVRWRFGLEDGRMKTLQEIGELMGVSR 575
Query: 366 ERIRQIESCAFRKLKNKKRTKHLQQYVM 283
ERIRQIES AFRKLKNKKRTKHL QY +
Sbjct: 576 ERIRQIESSAFRKLKNKKRTKHLMQYAI 603
>ref|XP_010278441.1| PREDICTED: RNA polymerase sigma factor sigB-like [Nelumbo nucifera]
Length = 572
Score = 660 bits (1703), Expect = 0.0
Identities = 375/608 (61%), Positives = 424/608 (69%), Gaps = 6/608 (0%)
Frame = -3
Query: 2088 MSCLLPQFRCLPDTFSVNFKSQNHSAIHPS----KTRDPIYFRTQCILSTATTTVLELEK 1921
M+CLLPQF+C PDT S++FK+ H + + K RD + FRTQCILST T T+
Sbjct: 1 MACLLPQFKCSPDTLSIHFKTHQHQHHYSNNSQLKARDLLCFRTQCILSTTTATM----- 55
Query: 1920 LQLPSLEAISSSVPADRSSKPTRTTAVLELEKLKLPSLDVHSKSIAANRPWTYIGAVGPP 1741
TT V++ EKL++PSL+ H S+ A+RP TYIGA+ PP
Sbjct: 56 -----------------------TTTVVDDEKLRMPSLEAHLISVPADRPLTYIGAIDPP 92
Query: 1740 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVSNRTDTTSDCETT 1561
VS + SD
Sbjct: 93 TKAKFEATLATEPLITGDEALIAAAAVEAVALAKAAVEIAKDAALMVSTNPSSKSDKWPP 152
Query: 1560 EIFLEVDNTLSERNQLAHFAERVDSRESKVTEIGLGENHSASYLLTESD-VEPXXXXXXX 1384
+I E+D E QL E+VD + LG + S +SD ++P
Sbjct: 153 DIPSELDTYWHETAQLNEI-EQVD-----MVHHSLG---AESRPKEDSDYLDPTDEELKL 203
Query: 1383 XXXXXXXSIAVRSNRQIXXXXXXXXXXXXXXANVVSVKSGSTSRKKR-VLQDIDYSDPLR 1207
SIAVRS RQ ANVV+VKSGS+SRKKR LQD+DYSDPLR
Sbjct: 204 LQMQLSKSIAVRSGRQTERRARRARAAEKVAANVVAVKSGSSSRKKRSALQDVDYSDPLR 263
Query: 1206 YLRGTTSSSKLLTAAEEQKLSGGIQDLLKLERLQVELTERYGDQLTFSQWAAAAGVDQKT 1027
YLRGTTS+S+LLTA EE + S GIQDLLKLE+L EL ERYG Q TF+QWAAAAG+DQKT
Sbjct: 264 YLRGTTSTSRLLTATEELEFSEGIQDLLKLEKLYEELAERYGGQPTFAQWAAAAGIDQKT 323
Query: 1026 LRKRLNYGILCKDKMIKSNIRLVISIAKNYQGVGMNLQDLVQEGCRGLVRGAEKFDASKG 847
LRKRLNYGILCKDKMIKSNIRLVISIAKNYQG GMNLQDLVQEGCRGLVRGAEKFDASKG
Sbjct: 324 LRKRLNYGILCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKG 383
Query: 846 FKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLFNENGRQPNNEEVA 667
FKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRV+EARKQL++ENGR P+NEEVA
Sbjct: 384 FKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVREARKQLYSENGRHPDNEEVA 443
Query: 666 EATGLSMKRLNAVLLTPKAPRSLDQKIGINQNLKPSEVISDPEAETSEDLLIKEFMKQDL 487
EATGLSMKRL AVLLTPKAPRSLDQKIGINQNLKPSEVI+DP+AET+E+LL+K+FMKQDL
Sbjct: 444 EATGLSMKRLTAVLLTPKAPRSLDQKIGINQNLKPSEVIADPDAETTEELLMKKFMKQDL 503
Query: 486 AKVLDTLNPREKQVIRWRFGLEDGRMKTLQEIGESMGVSRERIRQIESCAFRKLKNKKRT 307
KVLD+LNPREKQVIRWRFGLEDGRMKTLQEIGE MGVSRERIRQIESCAFRKLKNKKRT
Sbjct: 504 EKVLDSLNPREKQVIRWRFGLEDGRMKTLQEIGELMGVSRERIRQIESCAFRKLKNKKRT 563
Query: 306 KHLQQYVM 283
K+LQQY++
Sbjct: 564 KNLQQYLI 571
>gb|KHG18437.1| RNA polymerase sigma factor rpoD [Gossypium arboreum]
Length = 578
Score = 654 bits (1686), Expect = 0.0
Identities = 366/605 (60%), Positives = 424/605 (70%), Gaps = 3/605 (0%)
Frame = -3
Query: 2088 MSCLLPQFRCLPDTFSVNFKSQNHSAIHPSKTRDPIYFRTQCILSTATTTVLELEKLQLP 1909
MSCLLPQF+C PDTFS+ F++ +HS H SK ++ I FR+QC+LST ++T
Sbjct: 1 MSCLLPQFKCQPDTFSIQFRA-HHS--HHSKHKESICFRSQCVLSTTSST---------- 47
Query: 1908 SLEAISSSVPADRSSKPTRTTAVLELEKLKLPSLDVHSKSIAANRPWTYIGAVGPPXXXX 1729
T TTAVL++EKL+LPS + HS S+ +RPWTY GA GPP
Sbjct: 48 ----------------STATTAVLDVEKLRLPSFEAHSNSVVTDRPWTYTGATGPPSEAS 91
Query: 1728 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVSNRTDTTSDCETTEIFL 1549
V N + ++ ++
Sbjct: 92 FGATLATENLLTSDEAVIAAAAAEAVALARAAAKVAKDAAIMVKNHSSAKTEMKSPGS-- 149
Query: 1548 EVDNTLSERNQLAHFAERVDSRESKVT-EIGLGENHSASYLLTESD-VEPXXXXXXXXXX 1375
+TL+ + L AER V+ E+ + E+ ESD +EP
Sbjct: 150 SATDTLTSKWGLFTEAERAGIVGDYVSDELEMEEDDFEQNSTKESDELEPTNEELKLLEE 209
Query: 1374 XXXXSIAVRSNRQIXXXXXXXXXXXXXXANVVSVKSGSTSRKKR-VLQDIDYSDPLRYLR 1198
SIAVRSNRQ NVVSVKSGST+RK+R LQDIDYSDPLRYLR
Sbjct: 210 QLSRSIAVRSNRQPERKAKRTRAAEKAATNVVSVKSGSTNRKRRGALQDIDYSDPLRYLR 269
Query: 1197 GTTSSSKLLTAAEEQKLSGGIQDLLKLERLQVELTERYGDQLTFSQWAAAAGVDQKTLRK 1018
GTT++SKLLTA EE +LS GIQDLLKLE L EL ER G TF+QWAAAA VD+KTLR+
Sbjct: 270 GTTNTSKLLTANEELELSEGIQDLLKLEVLHEELAERCGRPPTFAQWAAAAEVDRKTLRE 329
Query: 1017 RLNYGILCKDKMIKSNIRLVISIAKNYQGVGMNLQDLVQEGCRGLVRGAEKFDASKGFKF 838
RLNYG +CKDKMIKSNIRLVISIAKNYQG GMNLQDLVQEGCRGL+RGAEKFDASKGFKF
Sbjct: 330 RLNYGTICKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLIRGAEKFDASKGFKF 389
Query: 837 STYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLFNENGRQPNNEEVAEAT 658
STYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQL++ENGRQP+N EVAEAT
Sbjct: 390 STYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRQPDNIEVAEAT 449
Query: 657 GLSMKRLNAVLLTPKAPRSLDQKIGINQNLKPSEVISDPEAETSEDLLIKEFMKQDLAKV 478
GLSMKRL AVLL PKAPRSLDQKIGINQNLKPSEVI+DPEA+++ED+L+K+FMK+DL KV
Sbjct: 450 GLSMKRLTAVLLAPKAPRSLDQKIGINQNLKPSEVIADPEADSAEDILLKQFMKKDLEKV 509
Query: 477 LDTLNPREKQVIRWRFGLEDGRMKTLQEIGESMGVSRERIRQIESCAFRKLKNKKRTKHL 298
LD+L+PRE+QVIRWRFG+EDGRMKTLQEIGESMGVSRERIRQIE CAFRKLKNK+RTKHL
Sbjct: 510 LDSLSPRERQVIRWRFGMEDGRMKTLQEIGESMGVSRERIRQIELCAFRKLKNKRRTKHL 569
Query: 297 QQYVM 283
QQY++
Sbjct: 570 QQYLL 574
>ref|XP_012070322.1| PREDICTED: RNA polymerase sigma factor sigB [Jatropha curcas]
gi|802585247|ref|XP_012070323.1| PREDICTED: RNA
polymerase sigma factor sigB [Jatropha curcas]
gi|643732514|gb|KDP39610.1| hypothetical protein
JCGZ_02630 [Jatropha curcas]
Length = 577
Score = 653 bits (1684), Expect = 0.0
Identities = 365/610 (59%), Positives = 421/610 (69%), Gaps = 8/610 (1%)
Frame = -3
Query: 2088 MSCLLPQFRCLPDTFSVNFKS---QNHSAIHPSKTRDPIYFRTQCILSTATTTVLELEKL 1918
MSCLLPQF+C PDTFS++F++ QN + +K+R+P+ FR QCILST +
Sbjct: 1 MSCLLPQFKCQPDTFSIHFRTHYLQNSNFCQSAKSREPVCFRAQCILSTTS--------- 51
Query: 1917 QLPSLEAISSSVPADRSSKPTRTTAVLELEKLKLPSLDVHSKSIAANRPWTYIGAVGPPX 1738
P+ +TAVL+LEKL+LPS + H S+ AN PWTY+G++GPP
Sbjct: 52 -------------------PSTSTAVLDLEKLRLPSFEAHPDSLVANSPWTYVGSIGPPK 92
Query: 1737 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVSNRTDTTSDCETTE 1558
S +S+ E+
Sbjct: 93 ETFGSTLATETLITGDDAVIAAAAAEAVALARAAAKVAKDAAILVKSF---PSSEAESK- 148
Query: 1557 IFLEVDNTLSERNQLAHFAERVDSR---ESKVTEIGLGENHSASYLLTESD-VEPXXXXX 1390
LE+ + ++ F E +R +S E G E H + ESD +EP
Sbjct: 149 --LEIPSIADVSSRWPQFTETDRARIIGDSVTAETGSREEHPMQHPTKESDHLEPTHEEL 206
Query: 1389 XXXXXXXXXSIAVRSNRQIXXXXXXXXXXXXXXANVVSVKSGSTSRKKR-VLQDIDYSDP 1213
IAVRS RQ ANV+S KSGSTS+KKR LQ++DYSDP
Sbjct: 207 ELLQKQLSEGIAVRSRRQTERKERRTRAAEKAAANVMSWKSGSTSKKKRGPLQEVDYSDP 266
Query: 1212 LRYLRGTTSSSKLLTAAEEQKLSGGIQDLLKLERLQVELTERYGDQLTFSQWAAAAGVDQ 1033
LRYLRGTTS+SKLLTA EE +LS GIQDLLKLERL EL ER G Q TF QWAAAAGVDQ
Sbjct: 267 LRYLRGTTSTSKLLTATEELELSEGIQDLLKLERLHEELAERCGGQPTFQQWAAAAGVDQ 326
Query: 1032 KTLRKRLNYGILCKDKMIKSNIRLVISIAKNYQGVGMNLQDLVQEGCRGLVRGAEKFDAS 853
KTLR RLNYGI CKD+MIKSNIRLVISIAKNYQG GMNLQDLVQEGCRGLVRGAEKFDAS
Sbjct: 327 KTLRTRLNYGISCKDRMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDAS 386
Query: 852 KGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLFNENGRQPNNEE 673
KGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQL++ENGR P++EE
Sbjct: 387 KGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRYPDDEE 446
Query: 672 VAEATGLSMKRLNAVLLTPKAPRSLDQKIGINQNLKPSEVISDPEAETSEDLLIKEFMKQ 493
VAEATGLSMKRL+AVLLTPKAPRSLDQKIGIN +LKPSE+I+DP+AET+EDLL+K+FMKQ
Sbjct: 447 VAEATGLSMKRLSAVLLTPKAPRSLDQKIGINMDLKPSEIIADPDAETAEDLLMKQFMKQ 506
Query: 492 DLAKVLDTLNPREKQVIRWRFGLEDGRMKTLQEIGESMGVSRERIRQIESCAFRKLKNKK 313
DL KVLD+L+PRE QVIRWRFGLEDGR+KTLQEIGE MGVSRERIRQIES AFRKLK KK
Sbjct: 507 DLEKVLDSLSPRENQVIRWRFGLEDGRIKTLQEIGEIMGVSRERIRQIESSAFRKLKKKK 566
Query: 312 RTKHLQQYVM 283
RTK L+QY++
Sbjct: 567 RTKQLKQYLV 576
>ref|XP_012434812.1| PREDICTED: RNA polymerase sigma factor sigB [Gossypium raimondii]
gi|763778947|gb|KJB46070.1| hypothetical protein
B456_007G347300 [Gossypium raimondii]
Length = 578
Score = 652 bits (1681), Expect = 0.0
Identities = 365/605 (60%), Positives = 423/605 (69%), Gaps = 3/605 (0%)
Frame = -3
Query: 2088 MSCLLPQFRCLPDTFSVNFKSQNHSAIHPSKTRDPIYFRTQCILSTATTTVLELEKLQLP 1909
MSCLLPQF+C PDTFS+ F++ +HS H SK ++ I FR+QC+LST ++T +
Sbjct: 1 MSCLLPQFKCQPDTFSIQFRA-HHS--HHSKHKESICFRSQCVLSTTSSTSMA------- 50
Query: 1908 SLEAISSSVPADRSSKPTRTTAVLELEKLKLPSLDVHSKSIAANRPWTYIGAVGPPXXXX 1729
TTAVL++EKL+LPS + HS S+ +RPWTY GA GPP
Sbjct: 51 -------------------TTAVLDVEKLRLPSFEAHSNSVVTDRPWTYTGATGPPSEAS 91
Query: 1728 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVSNRTDTTSDCETTEIFL 1549
V N ++ ++
Sbjct: 92 FGATLATENLLTSDEAVIAAAAAEAVALARAAAKVAKDAAIMVKNHGSAKTEMKSPGS-- 149
Query: 1548 EVDNTLSERNQLAHFAERVDSRESKVT-EIGLGENHSASYLLTESD-VEPXXXXXXXXXX 1375
+TL+ + L AER V+ E+ L E+H ESD +EP
Sbjct: 150 SATDTLTSKWGLFTEAERAGIVGDYVSDELELEEDHLEQNSTKESDELEPTNEELKLLEE 209
Query: 1374 XXXXSIAVRSNRQIXXXXXXXXXXXXXXANVVSVKSGSTSRKKR-VLQDIDYSDPLRYLR 1198
SIAVRS+RQ NVVSVKSGST+RK+R LQDIDYSDPLRYLR
Sbjct: 210 QLSRSIAVRSHRQTERKAKRTRAAEKAATNVVSVKSGSTNRKRRGALQDIDYSDPLRYLR 269
Query: 1197 GTTSSSKLLTAAEEQKLSGGIQDLLKLERLQVELTERYGDQLTFSQWAAAAGVDQKTLRK 1018
GTT++SKLLTA EE +LS GIQDLLKLE L EL ER G TF+QWAAAA VD+KTLR+
Sbjct: 270 GTTNTSKLLTANEELELSEGIQDLLKLEGLHEELAERCGRPPTFAQWAAAAEVDRKTLRE 329
Query: 1017 RLNYGILCKDKMIKSNIRLVISIAKNYQGVGMNLQDLVQEGCRGLVRGAEKFDASKGFKF 838
RLNYG +C DKMIKSNIRLVISIAKNYQG GMNLQDLVQEGCRGL+RGAEKFDASKGFKF
Sbjct: 330 RLNYGTICMDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLIRGAEKFDASKGFKF 389
Query: 837 STYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLFNENGRQPNNEEVAEAT 658
STYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLF+ENGRQP+N EVAEAT
Sbjct: 390 STYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLFSENGRQPDNIEVAEAT 449
Query: 657 GLSMKRLNAVLLTPKAPRSLDQKIGINQNLKPSEVISDPEAETSEDLLIKEFMKQDLAKV 478
GLSMKRL AVLL PKAPRSLDQKIGINQNLKPSEVI+DPEA+++ED+L+K+FMK+DL KV
Sbjct: 450 GLSMKRLTAVLLAPKAPRSLDQKIGINQNLKPSEVIADPEADSAEDILLKQFMKKDLEKV 509
Query: 477 LDTLNPREKQVIRWRFGLEDGRMKTLQEIGESMGVSRERIRQIESCAFRKLKNKKRTKHL 298
LD+L+PRE+QVIRWRFG+EDGR+KTLQEIGESMGVSRERIRQIE CAFRKLKNK+RTKHL
Sbjct: 510 LDSLSPRERQVIRWRFGMEDGRVKTLQEIGESMGVSRERIRQIELCAFRKLKNKRRTKHL 569
Query: 297 QQYVM 283
QQY++
Sbjct: 570 QQYLL 574
>ref|XP_010052664.1| PREDICTED: RNA polymerase sigma factor sigB isoform X1 [Eucalyptus
grandis]
Length = 601
Score = 648 bits (1672), Expect = 0.0
Identities = 361/574 (62%), Positives = 399/574 (69%), Gaps = 2/574 (0%)
Frame = -3
Query: 1998 KTRDPIYFRTQCILSTATTTVLELEKLQLPSLEAISSSVPADRSSKPTRTTAVLELEKLK 1819
K R+ YFR QC+LS + + L T VL++EKL+
Sbjct: 51 KNRETTYFRAQCLLSATSPSTLS-----------------------SAATAVVLDMEKLR 87
Query: 1818 LPSLDVHSKSIAANRPWTYIGAVGPPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 1639
LPSL+V + S +NRPWTY GAVGPP
Sbjct: 88 LPSLEVLTDSPTSNRPWTYTGAVGPPAEVNLGATLATETLLTSDEAVIAAAASEAVTLAK 147
Query: 1638 XXXXXXXXXXXXVSNRTDTTSDCETTEIFLEVDNTLSERNQLAHFAERVDSRESKVTEIG 1459
+ N + + D E+ +LS+ +L E E G
Sbjct: 148 AALKSAKHAALMIRNESSSNID-NKLELSSRTSTSLSKHAELLELEHSNILTELMEPEGG 206
Query: 1458 LGENHSASYLLTES-DVEPXXXXXXXXXXXXXXSIAVRSNRQIXXXXXXXXXXXXXXANV 1282
L E + Y +S D+EP SIAVRS RQ ANV
Sbjct: 207 LREGNVMQYSTDKSEDLEPTHEELQLLQVQLFKSIAVRSRRQTERKEIRERAAEKAAANV 266
Query: 1281 VSVKSGSTSRKKRV-LQDIDYSDPLRYLRGTTSSSKLLTAAEEQKLSGGIQDLLKLERLQ 1105
VSVKSGS S+KKR LQ++DYSDPLRYLRGTTSSS+LLTA EE +LS GIQDLLKLERLQ
Sbjct: 267 VSVKSGSLSKKKRAALQEVDYSDPLRYLRGTTSSSRLLTATEETELSEGIQDLLKLERLQ 326
Query: 1104 VELTERYGDQLTFSQWAAAAGVDQKTLRKRLNYGILCKDKMIKSNIRLVISIAKNYQGVG 925
VELTER G + F+QWAAAAGVDQKTLRKRLNYG LCKDKMIKSNIRLVISIAKNYQG G
Sbjct: 327 VELTERCGGEPAFAQWAAAAGVDQKTLRKRLNYGRLCKDKMIKSNIRLVISIAKNYQGAG 386
Query: 924 MNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVE 745
MNLQDLVQEGCRGLVRG EKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVE
Sbjct: 387 MNLQDLVQEGCRGLVRGCEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVE 446
Query: 744 ATYRVKEARKQLFNENGRQPNNEEVAEATGLSMKRLNAVLLTPKAPRSLDQKIGINQNLK 565
ATYRVKEARKQL++ENGRQP+NEEVAEATGLSMKRLNAVL+TPKAPRSLDQKIGINQNLK
Sbjct: 447 ATYRVKEARKQLYSENGRQPDNEEVAEATGLSMKRLNAVLMTPKAPRSLDQKIGINQNLK 506
Query: 564 PSEVISDPEAETSEDLLIKEFMKQDLAKVLDTLNPREKQVIRWRFGLEDGRMKTLQEIGE 385
PSEVI+DP AETSED+L+K+FM+QDL KVLDTLNPREKQV+RWRFGLEDGRMKTLQEIGE
Sbjct: 507 PSEVIADPNAETSEDVLLKQFMRQDLEKVLDTLNPREKQVVRWRFGLEDGRMKTLQEIGE 566
Query: 384 SMGVSRERIRQIESCAFRKLKNKKRTKHLQQYVM 283
MGVSRERIRQIESCAFRKLKNKKRTKHLQQYV+
Sbjct: 567 LMGVSRERIRQIESCAFRKLKNKKRTKHLQQYVL 600
>ref|XP_009792606.1| PREDICTED: RNA polymerase sigma factor sigB-like [Nicotiana
sylvestris]
Length = 588
Score = 647 bits (1669), Expect = 0.0
Identities = 371/610 (60%), Positives = 423/610 (69%), Gaps = 9/610 (1%)
Frame = -3
Query: 2088 MSCLLPQFRCLPDTFSVNFKSQNHSAIHPSKTRDPIYFRTQCILSTATT---TVLELEKL 1918
MSCLLPQF+CLPDTF+++FK+ SA SK RDP TQC+LST++T TVL++EKL
Sbjct: 1 MSCLLPQFKCLPDTFALSFKTHQQSAPQRSKGRDPSQLWTQCVLSTSSTAAATVLDIEKL 60
Query: 1917 QLPSLEAISSSVPADRSSKP---TRTTAVLELEKLKLPSLDVHSKSIAANRPWTYIG-AV 1750
QLPS+ DRS K TT ++++KLKL +S+ A+ P G A+
Sbjct: 61 QLPSI---------DRSWKTPLVNATTTEVDVQKLKL-------QSLEAHSPGYSGGVAL 104
Query: 1749 GPPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVSNRTDTTSDC 1570
+N DT +
Sbjct: 105 STEANTKAALATENLLTGEEAVIAAAAAEAVALAKAALKVAKDAVMMVGHNNSDDTVAGV 164
Query: 1569 ETTEIFLEVDNTLSERNQLAHFAERVDSRESKVTEIGLGENHSASYLLTES-DVEPXXXX 1393
+TT++ + RN + E K +E+ E++S+ T+S D+EP
Sbjct: 165 DTTQLLERFQPGETGRNSIVG--------ELKASEMRWSESNSSGNSHTDSEDLEPTHEE 216
Query: 1392 XXXXXXXXXXSIAVRSNRQIXXXXXXXXXXXXXXANVVSVKSGSTSRKKRV-LQDIDYSD 1216
IAVRS RQ ANVVSVKSGS RKKR +QD+DYSD
Sbjct: 217 LELLQTELLNGIAVRSKRQNERKARRARAVERAAANVVSVKSGSAGRKKRASVQDVDYSD 276
Query: 1215 PLRYLRGTTSSSKLLTAAEEQKLSGGIQDLLKLERLQVELTERYGDQLTFSQWAAAAGVD 1036
PLRYLRGTTS+S+LLTA+EE KLS GIQ+LLKLERLQ EL ER G Q T +QWAAAAGVD
Sbjct: 277 PLRYLRGTTSTSRLLTASEEHKLSEGIQELLKLERLQEELAERCGGQPTSAQWAAAAGVD 336
Query: 1035 QKTLRKRLNYGILCKDKMIKSNIRLVISIAKNYQGVGMNLQDLVQEGCRGLVRGAEKFDA 856
KTLRK +NYGILCKDKMIKSNIRLVISIAKNYQG GMNLQDLVQEGCRGLVRGAEKFDA
Sbjct: 337 LKTLRKHINYGILCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDA 396
Query: 855 SKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLFNENGRQPNNE 676
SKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQL++ENGR P+ E
Sbjct: 397 SKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRHPDEE 456
Query: 675 EVAEATGLSMKRLNAVLLTPKAPRSLDQKIGINQNLKPSEVISDPEAETSEDLLIKEFMK 496
E+AEATGLSMKRL A +LTPKAPRSLDQKIG NQNLKPSEVI+DPEAETSE+ LIK+FMK
Sbjct: 457 ELAEATGLSMKRLTAAMLTPKAPRSLDQKIGFNQNLKPSEVIADPEAETSEETLIKQFMK 516
Query: 495 QDLAKVLDTLNPREKQVIRWRFGLEDGRMKTLQEIGESMGVSRERIRQIESCAFRKLKNK 316
QDL KVLDTLNPRE+QVIRWRFGLEDGRMKTLQEIGE M VSRERIRQIES AFRKLKNK
Sbjct: 517 QDLQKVLDTLNPRERQVIRWRFGLEDGRMKTLQEIGELMSVSRERIRQIESSAFRKLKNK 576
Query: 315 KRTKHLQQYV 286
KRTK+LQQY+
Sbjct: 577 KRTKNLQQYI 586
>ref|XP_010251515.1| PREDICTED: RNA polymerase sigma factor sigB-like isoform X1 [Nelumbo
nucifera]
Length = 584
Score = 646 bits (1666), Expect = 0.0
Identities = 361/611 (59%), Positives = 425/611 (69%), Gaps = 9/611 (1%)
Frame = -3
Query: 2088 MSCLLPQFRCLPDTFSVNFKS---QNHSAIH----PSKTRDPIYFRTQCILSTATTTVLE 1930
M+CLLPQF+C PDT S++F++ Q+H H SK+RD + F+TQC+LST TT +
Sbjct: 1 MACLLPQFKCSPDTISIHFRTHQLQHHKHHHCNNNHSKSRDLLSFQTQCVLSTTTTAM-- 58
Query: 1929 LEKLQLPSLEAISSSVPADRSSKPTRTTAVLELEKLKLPSLDVHSKSIAANRPWTYIGAV 1750
TT ++++EKL++PSL+ HS S+A++RP +YIGA
Sbjct: 59 --------------------------TTTLVDVEKLRMPSLESHSISVASDRPLSYIGAT 92
Query: 1749 GPPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVSNRTDTTSDC 1570
GPP V++++ + S+
Sbjct: 93 GPPTKASFEATLAMESLITGDEALIAAAAAEAVALAKEAVEVAKDAALMVNDKSSSESEN 152
Query: 1569 ETTEIFLEVDNTLSERNQLAHFAERVDSRESKVTEIGLGENHSASYLLTESD-VEPXXXX 1393
++ E E+ QL E S E E S + +SD ++
Sbjct: 153 GPSDFSSESHIFRLEKAQLTETQEVGRIDHSVGLESRQEEEQSVQFSNKDSDGLDSSDEE 212
Query: 1392 XXXXXXXXXXSIAVRSNRQIXXXXXXXXXXXXXXANVVSVKSGSTSRKKRV-LQDIDYSD 1216
SIAVRS RQ NV+SVKSG +SRK+R LQDIDYSD
Sbjct: 213 FKLLQMQLLKSIAVRSGRQTERQARRARAMEKASTNVLSVKSGHSSRKRRAALQDIDYSD 272
Query: 1215 PLRYLRGTTSSSKLLTAAEEQKLSGGIQDLLKLERLQVELTERYGDQLTFSQWAAAAGVD 1036
PLRYLRGTTS+S+LLTA EE +LS GIQDLLKLE+L EL ER G Q TF+QWAAAAGVD
Sbjct: 273 PLRYLRGTTSTSRLLTATEELELSEGIQDLLKLEKLHEELAERCGGQPTFAQWAAAAGVD 332
Query: 1035 QKTLRKRLNYGILCKDKMIKSNIRLVISIAKNYQGVGMNLQDLVQEGCRGLVRGAEKFDA 856
QKTLRKRLNYGILCKDKMIKSNIRLVISIAKNYQG GMNLQDLVQEGCRGLV+GAEKFDA
Sbjct: 333 QKTLRKRLNYGILCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVKGAEKFDA 392
Query: 855 SKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLFNENGRQPNNE 676
SKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRV+EA+KQL++ENGR P+NE
Sbjct: 393 SKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVREAKKQLYSENGRHPDNE 452
Query: 675 EVAEATGLSMKRLNAVLLTPKAPRSLDQKIGINQNLKPSEVISDPEAETSEDLLIKEFMK 496
EVAEATGLSMKRL AVLLTPKAP SLDQKIG+NQ++KPSE+I+DP+AET+E+LLIK+FMK
Sbjct: 453 EVAEATGLSMKRLTAVLLTPKAPISLDQKIGMNQDMKPSEIIADPDAETAEELLIKQFMK 512
Query: 495 QDLAKVLDTLNPREKQVIRWRFGLEDGRMKTLQEIGESMGVSRERIRQIESCAFRKLKNK 316
QDL KVLD+LNPREKQVIRWRFG+EDGRMKTLQEIGE MGVSRERIRQIESCAFRKLKNK
Sbjct: 513 QDLEKVLDSLNPREKQVIRWRFGMEDGRMKTLQEIGELMGVSRERIRQIESCAFRKLKNK 572
Query: 315 KRTKHLQQYVM 283
+RTK+LQQYV+
Sbjct: 573 RRTKNLQQYVI 583
>ref|XP_007029868.1| RNApolymerase sigma subunit 2 [Theobroma cacao]
gi|508718473|gb|EOY10370.1| RNApolymerase sigma subunit 2
[Theobroma cacao]
Length = 623
Score = 645 bits (1665), Expect = 0.0
Identities = 373/646 (57%), Positives = 425/646 (65%), Gaps = 44/646 (6%)
Frame = -3
Query: 2088 MSCLLPQFRCLPDTFSVNFKSQNH----------------------SAIHPSKT------ 1993
MSCLLPQF+C PDTFS+ F++ + + +P K
Sbjct: 1 MSCLLPQFKCQPDTFSIQFRTHHSHHFLIAVTGMVKYFSPRQCSCGNLTNPPKVSGLIFV 60
Query: 1992 -----RDPIYFRTQCILSTATTTVLELEKLQLPSLEAISSSVPADRSSKPTRTTAVLELE 1828
++ I FRTQC+LST + SS T TAVL++E
Sbjct: 61 VLAKHKEHICFRTQCVLSTTS-------------------------SSTSTTATAVLDVE 95
Query: 1827 KLKLPSLDVHSKSIAANRPWTYIGAVGPPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 1648
KL+LPS + H S+A +RPWTYIGA GPP
Sbjct: 96 KLRLPSFEAHPNSVAVDRPWTYIGATGPPSEASLGATLATDNLLTSDEAVIAAAAAEAVA 155
Query: 1647 XXXXXXXXXXXXXXXVSNRTDTTSDCETTEIFLEVDNTLSERNQLAHFAERVDS-RESKV 1471
N ++ ++ F ++ + + L AER +S
Sbjct: 156 LARAAVKVAKDAALMAENYNYAKTEMKSGVSF--ATDSFTSKWALFTEAERAGIIGDSPT 213
Query: 1470 TEIGLGENHSASYLLTESD-VEPXXXXXXXXXXXXXXSIAVRSNRQIXXXXXXXXXXXXX 1294
E + E+ S TESD +EP SIAVRS RQ
Sbjct: 214 DESEMEEDDSEQNSTTESDELEPTNEELEHLEEQLSRSIAVRSRRQTERKAKRTRAAEKA 273
Query: 1293 XANVVSVKSGSTSRKKR-VLQDIDYSDPLRYLRGTTSSSKLLTAAEEQKLSGGIQDLLKL 1117
ANVVSVKSGST+RK+R LQD+DYSDPLRYLRGTTS+S+LLTA EE +LS GIQDLLKL
Sbjct: 274 AANVVSVKSGSTNRKRRGALQDVDYSDPLRYLRGTTSTSRLLTANEELELSEGIQDLLKL 333
Query: 1116 ERLQVELTERYGDQLTFSQWAAAAGVDQKTLRKRLNYGILCKDKMIKSNIRLVISIAKNY 937
ERLQ EL ER G Q TF+QWAAAAGVDQKTLR RLNYG+ CKDKMIKSNIRLVISIAKNY
Sbjct: 334 ERLQEELAERCGGQPTFAQWAAAAGVDQKTLRSRLNYGVHCKDKMIKSNIRLVISIAKNY 393
Query: 936 QGVGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPF 757
QG GMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPF
Sbjct: 394 QGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPF 453
Query: 756 HMVEATYRVKEARKQLFNENGRQPNNEEVAEATGLSMKRLNAVLLTPKAPRSLDQKIGIN 577
HMVEATYRVKEARKQL++ENGR P+NEEVAEATGLSMKRL AVLLTPKAPRSLDQKIGIN
Sbjct: 454 HMVEATYRVKEARKQLYSENGRHPDNEEVAEATGLSMKRLTAVLLTPKAPRSLDQKIGIN 513
Query: 576 QNLKPS--------EVISDPEAETSEDLLIKEFMKQDLAKVLDTLNPREKQVIRWRFGLE 421
QNLKPS EVI+DPEAET+ED+LIK+FM++DL KVLD+L+ RE+QVIRWRFG+E
Sbjct: 514 QNLKPSVCPVSSLAEVIADPEAETAEDMLIKQFMRKDLEKVLDSLSQRERQVIRWRFGME 573
Query: 420 DGRMKTLQEIGESMGVSRERIRQIESCAFRKLKNKKRTKHLQQYVM 283
DGRMKTLQEIGE MGVSRERIRQIESCAFRKLKNKKRTKHLQQY++
Sbjct: 574 DGRMKTLQEIGELMGVSRERIRQIESCAFRKLKNKKRTKHLQQYLL 619
>gb|AKC88661.1| sigma factor [Melianthus villosus]
Length = 565
Score = 632 bits (1631), Expect = e-178
Identities = 359/604 (59%), Positives = 420/604 (69%), Gaps = 2/604 (0%)
Frame = -3
Query: 2088 MSCLLPQFRCLPDTFSVNFKSQNHSAIHPSKTRDPIYFRTQCILSTATTTVLELEKLQLP 1909
M+CLLPQF+ +T + F+ ++ H + R+ +YFR QCIL T +T P
Sbjct: 1 MACLLPQFKYPRETLFLQFRPHHY---HHPRNREVVYFRPQCILCTTST----------P 47
Query: 1908 SLEAISSSVPADRSSKPTRTTAVLELEKLKLPSLDVHSKSIAANRPWTYIGAVGPPXXXX 1729
+ EA TT+VLE+EKL++P+L+ HS S+A NRPWTY+GA+GPP
Sbjct: 48 TSEA---------------TTSVLEMEKLRMPTLEAHSTSLAVNRPWTYMGAIGPPTEGN 92
Query: 1728 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVSNRTDTTSDCETTEIFL 1549
++N + +++ E+ +
Sbjct: 93 LKETLSVEETLLADDEAVIAAAAAEAVALARAAVEFAKDAVLIAN-SYQSANAESKPVIS 151
Query: 1548 EVDNTLSERNQLAHFAERVDSRESKVTEIGLGENHSASYLLTES-DVEPXXXXXXXXXXX 1372
+T QL ERV GL E+ + + ES D EP
Sbjct: 152 SKFDTSWSNVQLTE-TERV----------GLLEDDTMQNAVLESDDAEPTHEELELIQEE 200
Query: 1371 XXXSIAVRSNRQIXXXXXXXXXXXXXXANVVSVKSGSTSRKKRV-LQDIDYSDPLRYLRG 1195
+I VRS RQ ANVVSVKSGSTSRKK V LQ+IDYSD LRYLRG
Sbjct: 201 LFNNITVRSKRQTERKARRARAAEKAAANVVSVKSGSTSRKKHVSLQEIDYSDQLRYLRG 260
Query: 1194 TTSSSKLLTAAEEQKLSGGIQDLLKLERLQVELTERYGDQLTFSQWAAAAGVDQKTLRKR 1015
TTSSS+LLTA EE +LS GIQDLLKLE+LQ EL ER G Q TF+Q AAAAGVD+KTLRKR
Sbjct: 261 TTSSSRLLTANEELQLSVGIQDLLKLEKLQEELAERCGCQPTFAQCAAAAGVDKKTLRKR 320
Query: 1014 LNYGILCKDKMIKSNIRLVISIAKNYQGVGMNLQDLVQEGCRGLVRGAEKFDASKGFKFS 835
LN+GI+CK+KMIKSNIRLVISIAKNYQG GMNLQDLVQEGCRGL RGAEKFDASKGFKFS
Sbjct: 321 LNHGIICKNKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLARGAEKFDASKGFKFS 380
Query: 834 TYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLFNENGRQPNNEEVAEATG 655
TYAHWWIKQA+RKSLSDQSRTIRLPFHMVEATYRVKEARKQL++ENGR P++EE+AEATG
Sbjct: 381 TYAHWWIKQAIRKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRHPDDEEIAEATG 440
Query: 654 LSMKRLNAVLLTPKAPRSLDQKIGINQNLKPSEVISDPEAETSEDLLIKEFMKQDLAKVL 475
LSMKRL AVLLTPKAPRSLDQKIGINQNLKPSEVI+DPE ET+EDLLIK+FMKQDL KVL
Sbjct: 441 LSMKRLTAVLLTPKAPRSLDQKIGINQNLKPSEVIADPEVETAEDLLIKKFMKQDLEKVL 500
Query: 474 DTLNPREKQVIRWRFGLEDGRMKTLQEIGESMGVSRERIRQIESCAFRKLKNKKRTKHLQ 295
++LN REKQV+RWR+GL DGR+KTLQEIGE MGVSRERIRQIESCAFRKLKNK+RT+HLQ
Sbjct: 501 NSLNLREKQVVRWRYGLVDGRIKTLQEIGELMGVSRERIRQIESCAFRKLKNKRRTRHLQ 560
Query: 294 QYVM 283
QY++
Sbjct: 561 QYLV 564