BLASTX nr result

ID: Forsythia21_contig00004270 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Forsythia21_contig00004270
         (421 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_011087223.1| PREDICTED: DNA-directed RNA polymerase I sub...   155   1e-35
ref|XP_009623390.1| PREDICTED: DNA-directed RNA polymerase I sub...   147   2e-33
ref|XP_006366498.1| PREDICTED: probable DNA-directed RNA polymer...   146   5e-33
ref|XP_004229596.1| PREDICTED: DNA-directed RNA polymerase I sub...   145   8e-33
ref|XP_009795429.1| PREDICTED: DNA-directed RNA polymerase I sub...   143   4e-32
ref|XP_012849697.1| PREDICTED: DNA-directed RNA polymerase I sub...   134   2e-29
ref|XP_010659082.1| PREDICTED: DNA-directed RNA polymerase I sub...   131   2e-28
ref|XP_010659083.1| PREDICTED: DNA-directed RNA polymerase I sub...   131   2e-28
ref|XP_006594369.1| PREDICTED: DNA-directed RNA polymerase I sub...   126   6e-27
ref|XP_003542805.1| PREDICTED: DNA-directed RNA polymerase I sub...   126   6e-27
gb|KHN35264.1| DNA-directed RNA polymerase I subunit RPA2 [Glyci...   124   3e-26
ref|XP_003550091.1| PREDICTED: probable DNA-directed RNA polymer...   124   3e-26
emb|CDP07938.1| unnamed protein product [Coffea canephora]            123   4e-26
ref|XP_004146776.1| PREDICTED: DNA-directed RNA polymerase I sub...   122   9e-26
ref|XP_008445376.1| PREDICTED: DNA-directed RNA polymerase I sub...   122   1e-25
ref|XP_010278175.1| PREDICTED: DNA-directed RNA polymerase I sub...   121   2e-25
ref|XP_007010837.1| Nuclear RNA polymerase A2 isoform 2 [Theobro...   115   1e-23
ref|XP_007133696.1| hypothetical protein PHAVU_011G201300g [Phas...   114   3e-23
gb|KHN37718.1| Putative DNA-directed RNA polymerase I subunit RP...   112   1e-22
gb|KCW65882.1| hypothetical protein EUGRSUZ_G03213 [Eucalyptus g...   109   6e-22

>ref|XP_011087223.1| PREDICTED: DNA-directed RNA polymerase I subunit RPA2 [Sesamum
           indicum]
          Length = 1196

 Score =  155 bits (391), Expect = 1e-35
 Identities = 69/84 (82%), Positives = 79/84 (94%)
 Frame = -3

Query: 254 RPHLSKERDYEALRELFKHHIESFDYMVEHGLDTMLQNVKPVEVFDSFSKLKLRIWFGKP 75
           RPHL++E+DYEALRELFKHHI+SFD+MVEHG++ ML ++KPVEVFDSFS LKLRIWF  P
Sbjct: 22  RPHLAEEKDYEALRELFKHHIDSFDHMVEHGIERMLLSIKPVEVFDSFSNLKLRIWFENP 81

Query: 74  ELYPPQKERFSRTMADALYPFECR 3
           E+YPPQKERFSRTMADALYPFECR
Sbjct: 82  EIYPPQKERFSRTMADALYPFECR 105


>ref|XP_009623390.1| PREDICTED: DNA-directed RNA polymerase I subunit RPA2 [Nicotiana
           tomentosiformis]
          Length = 1185

 Score =  147 bits (372), Expect = 2e-33
 Identities = 66/84 (78%), Positives = 77/84 (91%)
 Frame = -3

Query: 254 RPHLSKERDYEALRELFKHHIESFDYMVEHGLDTMLQNVKPVEVFDSFSKLKLRIWFGKP 75
           RPHL +E+DY AL+ELF HHIESFD+MV++GL+TML N+KPVEV DSFSKLKLRIWFGKP
Sbjct: 14  RPHLLQEKDYSALKELFSHHIESFDHMVDNGLETMLLNIKPVEVLDSFSKLKLRIWFGKP 73

Query: 74  ELYPPQKERFSRTMADALYPFECR 3
           E++PPQKER S+TM DALYPFECR
Sbjct: 74  EIFPPQKERTSKTMHDALYPFECR 97


>ref|XP_006366498.1| PREDICTED: probable DNA-directed RNA polymerase I subunit RPA2-like
           [Solanum tuberosum]
          Length = 1179

 Score =  146 bits (369), Expect = 5e-33
 Identities = 65/84 (77%), Positives = 75/84 (89%)
 Frame = -3

Query: 254 RPHLSKERDYEALRELFKHHIESFDYMVEHGLDTMLQNVKPVEVFDSFSKLKLRIWFGKP 75
           RPHL  E+DY AL+ELF HHIESFDYMV++GL+TML N+KP+E+ DSFS LKLRIWFGKP
Sbjct: 11  RPHLVAEKDYSALKELFSHHIESFDYMVDNGLETMLLNIKPIEIVDSFSSLKLRIWFGKP 70

Query: 74  ELYPPQKERFSRTMADALYPFECR 3
           EL+PPQKER S+TM DALYPFECR
Sbjct: 71  ELFPPQKERASKTMHDALYPFECR 94


>ref|XP_004229596.1| PREDICTED: DNA-directed RNA polymerase I subunit RPA2 isoform X1
           [Solanum lycopersicum]
          Length = 1184

 Score =  145 bits (367), Expect = 8e-33
 Identities = 66/93 (70%), Positives = 78/93 (83%)
 Frame = -3

Query: 281 KAEDSLQGLRPHLSKERDYEALRELFKHHIESFDYMVEHGLDTMLQNVKPVEVFDSFSKL 102
           K++ S    RPHL  E+DY AL+ELF HHIESFDYMV++GL+TML N+KP+E+ DSFS L
Sbjct: 7   KSDGSKAMSRPHLVAEKDYSALKELFSHHIESFDYMVDNGLETMLLNIKPIEIVDSFSSL 66

Query: 101 KLRIWFGKPELYPPQKERFSRTMADALYPFECR 3
           KLRIWFGKPEL+PPQKER S+ M DALYPFECR
Sbjct: 67  KLRIWFGKPELFPPQKERASKAMHDALYPFECR 99


>ref|XP_009795429.1| PREDICTED: DNA-directed RNA polymerase I subunit RPA2 [Nicotiana
           sylvestris]
          Length = 1185

 Score =  143 bits (361), Expect = 4e-32
 Identities = 64/84 (76%), Positives = 76/84 (90%)
 Frame = -3

Query: 254 RPHLSKERDYEALRELFKHHIESFDYMVEHGLDTMLQNVKPVEVFDSFSKLKLRIWFGKP 75
           RPHL +E+DY AL+ELF HHIESFD+MV++GL+TML ++KPVEV DSF KLKLRIWFGKP
Sbjct: 14  RPHLLQEKDYSALKELFSHHIESFDHMVDNGLETMLLSIKPVEVLDSFFKLKLRIWFGKP 73

Query: 74  ELYPPQKERFSRTMADALYPFECR 3
           E++PPQKER S+TM DALYPFECR
Sbjct: 74  EIFPPQKERTSKTMHDALYPFECR 97


>ref|XP_012849697.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa2 [Erythranthe
           guttatus]
          Length = 1200

 Score =  134 bits (337), Expect = 2e-29
 Identities = 59/93 (63%), Positives = 75/93 (80%)
 Frame = -3

Query: 281 KAEDSLQGLRPHLSKERDYEALRELFKHHIESFDYMVEHGLDTMLQNVKPVEVFDSFSKL 102
           K  ++ +   PHL KE+DYEALRE+FKHHI+SFDYMVEHG + M+  +KPVEV DS +K 
Sbjct: 16  KDSNTKKSWSPHLDKEKDYEALREIFKHHIDSFDYMVEHGFEKMMLGLKPVEVVDSSTKQ 75

Query: 101 KLRIWFGKPELYPPQKERFSRTMADALYPFECR 3
           KLRIWF  PE++PPQK+R ++T+AD LYPFECR
Sbjct: 76  KLRIWFENPEIFPPQKDRATKTIADPLYPFECR 108


>ref|XP_010659082.1| PREDICTED: DNA-directed RNA polymerase I subunit RPA2 isoform X1
           [Vitis vinifera]
          Length = 1178

 Score =  131 bits (330), Expect = 2e-28
 Identities = 61/87 (70%), Positives = 72/87 (82%)
 Frame = -3

Query: 263 QGLRPHLSKERDYEALRELFKHHIESFDYMVEHGLDTMLQNVKPVEVFDSFSKLKLRIWF 84
           Q L    +   DYE LRELF+HHI+SFD++VE GL+T+L +VKPVEV DSF+K KLRIWF
Sbjct: 5   QALEKMATAGPDYEPLRELFQHHIDSFDHLVEFGLETLLMSVKPVEVVDSFTKQKLRIWF 64

Query: 83  GKPELYPPQKERFSRTMADALYPFECR 3
           G+PELYPPQKER +RTM DALYPFECR
Sbjct: 65  GQPELYPPQKERSARTMRDALYPFECR 91


>ref|XP_010659083.1| PREDICTED: DNA-directed RNA polymerase I subunit RPA2 isoform X2
           [Vitis vinifera] gi|731414307|ref|XP_010659084.1|
           PREDICTED: DNA-directed RNA polymerase I subunit RPA2
           isoform X2 [Vitis vinifera]
          Length = 1169

 Score =  131 bits (329), Expect = 2e-28
 Identities = 59/76 (77%), Positives = 69/76 (90%)
 Frame = -3

Query: 230 DYEALRELFKHHIESFDYMVEHGLDTMLQNVKPVEVFDSFSKLKLRIWFGKPELYPPQKE 51
           DYE LRELF+HHI+SFD++VE GL+T+L +VKPVEV DSF+K KLRIWFG+PELYPPQKE
Sbjct: 7   DYEPLRELFQHHIDSFDHLVEFGLETLLMSVKPVEVVDSFTKQKLRIWFGQPELYPPQKE 66

Query: 50  RFSRTMADALYPFECR 3
           R +RTM DALYPFECR
Sbjct: 67  RSARTMRDALYPFECR 82


>ref|XP_006594369.1| PREDICTED: DNA-directed RNA polymerase I subunit RPA2-like isoform
           X2 [Glycine max]
          Length = 1151

 Score =  126 bits (316), Expect = 6e-27
 Identities = 58/76 (76%), Positives = 64/76 (84%)
 Frame = -3

Query: 230 DYEALRELFKHHIESFDYMVEHGLDTMLQNVKPVEVFDSFSKLKLRIWFGKPELYPPQKE 51
           D+EALRELFKHHIESFDYMV+ GLDTML ++KPVEVFD F+  KLRIW   P LYPPQKE
Sbjct: 10  DFEALRELFKHHIESFDYMVDAGLDTMLGHIKPVEVFDDFTSTKLRIWLDNPVLYPPQKE 69

Query: 50  RFSRTMADALYPFECR 3
           R SRTM +AL PFECR
Sbjct: 70  RISRTMREALLPFECR 85


>ref|XP_003542805.1| PREDICTED: DNA-directed RNA polymerase I subunit RPA2-like isoform
           X1 [Glycine max]
          Length = 1175

 Score =  126 bits (316), Expect = 6e-27
 Identities = 58/76 (76%), Positives = 64/76 (84%)
 Frame = -3

Query: 230 DYEALRELFKHHIESFDYMVEHGLDTMLQNVKPVEVFDSFSKLKLRIWFGKPELYPPQKE 51
           D+EALRELFKHHIESFDYMV+ GLDTML ++KPVEVFD F+  KLRIW   P LYPPQKE
Sbjct: 10  DFEALRELFKHHIESFDYMVDAGLDTMLGHIKPVEVFDDFTSTKLRIWLDNPVLYPPQKE 69

Query: 50  RFSRTMADALYPFECR 3
           R SRTM +AL PFECR
Sbjct: 70  RISRTMREALLPFECR 85


>gb|KHN35264.1| DNA-directed RNA polymerase I subunit RPA2 [Glycine soja]
          Length = 1175

 Score =  124 bits (310), Expect = 3e-26
 Identities = 55/76 (72%), Positives = 64/76 (84%)
 Frame = -3

Query: 230 DYEALRELFKHHIESFDYMVEHGLDTMLQNVKPVEVFDSFSKLKLRIWFGKPELYPPQKE 51
           D+EALRELFKHHIESFDYM + GL+TML+++KP+EVFD F+  KLRIW   P LYPPQKE
Sbjct: 10  DFEALRELFKHHIESFDYMADAGLETMLRHIKPIEVFDDFTSTKLRIWLDNPVLYPPQKE 69

Query: 50  RFSRTMADALYPFECR 3
           R SRTM +AL PFECR
Sbjct: 70  RISRTMREALLPFECR 85


>ref|XP_003550091.1| PREDICTED: probable DNA-directed RNA polymerase I subunit RPA2-like
           isoform X1 [Glycine max]
          Length = 1175

 Score =  124 bits (310), Expect = 3e-26
 Identities = 55/76 (72%), Positives = 64/76 (84%)
 Frame = -3

Query: 230 DYEALRELFKHHIESFDYMVEHGLDTMLQNVKPVEVFDSFSKLKLRIWFGKPELYPPQKE 51
           D+EALRELFKHHIESFDYM + GL+TML+++KP+EVFD F+  KLRIW   P LYPPQKE
Sbjct: 10  DFEALRELFKHHIESFDYMADAGLETMLRHIKPIEVFDDFTSTKLRIWLDNPVLYPPQKE 69

Query: 50  RFSRTMADALYPFECR 3
           R SRTM +AL PFECR
Sbjct: 70  RISRTMREALLPFECR 85


>emb|CDP07938.1| unnamed protein product [Coffea canephora]
          Length = 1209

 Score =  123 bits (309), Expect = 4e-26
 Identities = 60/104 (57%), Positives = 71/104 (68%), Gaps = 19/104 (18%)
 Frame = -3

Query: 257 LRPHLSKERDYEALRELFKHHIESFDYMVEHGLDTMLQNVKPVEVFDSFSKLKLR----- 93
           L PHL KE+DY AL ELF+HHIESFD+MVE+G++TML N+KPV+VF   S  KLR     
Sbjct: 19  LAPHLLKEKDYSALEELFRHHIESFDHMVEYGIETMLLNIKPVQVFHPLSNQKLRNILFY 78

Query: 92  --------------IWFGKPELYPPQKERFSRTMADALYPFECR 3
                         +WFGKPE++PPQ ER  RTM DALYPFECR
Sbjct: 79  HLITAWFGSLTDTILWFGKPEIFPPQTERQLRTMKDALYPFECR 122


>ref|XP_004146776.1| PREDICTED: DNA-directed RNA polymerase I subunit RPA2 [Cucumis
           sativus]
          Length = 1173

 Score =  122 bits (306), Expect = 9e-26
 Identities = 52/80 (65%), Positives = 69/80 (86%)
 Frame = -3

Query: 242 SKERDYEALRELFKHHIESFDYMVEHGLDTMLQNVKPVEVFDSFSKLKLRIWFGKPELYP 63
           ++  DYEALRELF+HHIESFD++V+ GL+T++ ++KPVE++DSF+  KLRIW GKPELYP
Sbjct: 6   NENEDYEALRELFRHHIESFDHLVDAGLETLMNSIKPVEIYDSFTNKKLRIWLGKPELYP 65

Query: 62  PQKERFSRTMADALYPFECR 3
           PQKER  RT+ +AL P+ECR
Sbjct: 66  PQKERNLRTIREALLPYECR 85


>ref|XP_008445376.1| PREDICTED: DNA-directed RNA polymerase I subunit RPA2 [Cucumis
           melo]
          Length = 1173

 Score =  122 bits (305), Expect = 1e-25
 Identities = 52/79 (65%), Positives = 68/79 (86%)
 Frame = -3

Query: 239 KERDYEALRELFKHHIESFDYMVEHGLDTMLQNVKPVEVFDSFSKLKLRIWFGKPELYPP 60
           +  DYEALRELF+HHIESFD++V+ GL+T++ ++KPVE++DSF+  KLRIW GKPELYPP
Sbjct: 7   ENEDYEALRELFRHHIESFDHLVDAGLETLMNSIKPVEIYDSFTNKKLRIWLGKPELYPP 66

Query: 59  QKERFSRTMADALYPFECR 3
           QKER  RT+ +AL P+ECR
Sbjct: 67  QKERNLRTIREALLPYECR 85


>ref|XP_010278175.1| PREDICTED: DNA-directed RNA polymerase I subunit RPA2 [Nelumbo
           nucifera]
          Length = 1350

 Score =  121 bits (304), Expect = 2e-25
 Identities = 54/78 (69%), Positives = 66/78 (84%)
 Frame = -3

Query: 236 ERDYEALRELFKHHIESFDYMVEHGLDTMLQNVKPVEVFDSFSKLKLRIWFGKPELYPPQ 57
           + DYE+LRELFK HI+SFDY V+ GL+TML ++KPVE+ DSF+K KLRIWFGK ELYPPQ
Sbjct: 8   KHDYESLRELFKPHIDSFDYFVDAGLETMLMHIKPVEIVDSFTKTKLRIWFGKSELYPPQ 67

Query: 56  KERFSRTMADALYPFECR 3
           KER S+++ D L PFECR
Sbjct: 68  KERISKSIRDPLLPFECR 85


>ref|XP_007010837.1| Nuclear RNA polymerase A2 isoform 2 [Theobroma cacao]
           gi|508727750|gb|EOY19647.1| Nuclear RNA polymerase A2
           isoform 2 [Theobroma cacao]
          Length = 1180

 Score =  115 bits (287), Expect = 1e-23
 Identities = 52/80 (65%), Positives = 62/80 (77%)
 Frame = -3

Query: 242 SKERDYEALRELFKHHIESFDYMVEHGLDTMLQNVKPVEVFDSFSKLKLRIWFGKPELYP 63
           S   + E L+ELFKHHIESFDYM++ GLD ML+ VKPV++FDS S   LRIW   PE+YP
Sbjct: 13  SDAEELEELKELFKHHIESFDYMIDEGLDLMLKRVKPVQIFDSSSNKTLRIWLDHPEVYP 72

Query: 62  PQKERFSRTMADALYPFECR 3
           PQK+R S+T A ALYPFECR
Sbjct: 73  PQKDRSSKTSAGALYPFECR 92


>ref|XP_007133696.1| hypothetical protein PHAVU_011G201300g [Phaseolus vulgaris]
           gi|561006696|gb|ESW05690.1| hypothetical protein
           PHAVU_011G201300g [Phaseolus vulgaris]
          Length = 1180

 Score =  114 bits (285), Expect = 3e-23
 Identities = 51/76 (67%), Positives = 62/76 (81%)
 Frame = -3

Query: 230 DYEALRELFKHHIESFDYMVEHGLDTMLQNVKPVEVFDSFSKLKLRIWFGKPELYPPQKE 51
           D+EALRELFKHHIESFD+MV+ GL+T L ++KP+EV D F+  KLRIW   P +YPPQKE
Sbjct: 10  DFEALRELFKHHIESFDHMVKAGLETTLLHIKPIEVLDDFTTTKLRIWLENPVVYPPQKE 69

Query: 50  RFSRTMADALYPFECR 3
           R S+TM +AL PFECR
Sbjct: 70  RISKTMREALLPFECR 85


>gb|KHN37718.1| Putative DNA-directed RNA polymerase I subunit RPA2 [Glycine soja]
          Length = 326

 Score =  112 bits (279), Expect = 1e-22
 Identities = 54/83 (65%), Positives = 62/83 (74%), Gaps = 9/83 (10%)
 Frame = -3

Query: 230 DYEALRELFKHHIESFDYMVEHGLDTMLQNVKPVEVFDSFSKLKLR---------IWFGK 78
           D+EALRELFKHHIESFDYMV+ GLDTML ++KPVE+FD F+  KLR         +W   
Sbjct: 10  DFEALRELFKHHIESFDYMVDAGLDTMLGHIKPVEIFDDFTSTKLRNILFFNEKTLWLDN 69

Query: 77  PELYPPQKERFSRTMADALYPFE 9
           P LYPPQKER SRTM +AL PFE
Sbjct: 70  PVLYPPQKERISRTMREALLPFE 92


>gb|KCW65882.1| hypothetical protein EUGRSUZ_G03213 [Eucalyptus grandis]
          Length = 1082

 Score =  109 bits (273), Expect = 6e-22
 Identities = 49/76 (64%), Positives = 60/76 (78%)
 Frame = -3

Query: 230 DYEALRELFKHHIESFDYMVEHGLDTMLQNVKPVEVFDSFSKLKLRIWFGKPELYPPQKE 51
           DY ALRELF+HHIESFD++V+ GL+TML  +KPV++FD  S   L+IWF KPE+Y PQKE
Sbjct: 10  DYGALRELFRHHIESFDHLVDRGLETMLDKIKPVQIFDPSSDKTLKIWFAKPEVYQPQKE 69

Query: 50  RFSRTMADALYPFECR 3
             S+T  DAL PFECR
Sbjct: 70  GSSKTSHDALLPFECR 85


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