BLASTX nr result

ID: Forsythia21_contig00002810 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Forsythia21_contig00002810
         (566 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI39675.3| unnamed protein product [Vitis vinifera]               67   7e-09
ref|XP_009365457.1| PREDICTED: uncharacterized protein LOC103955...    64   5e-08
ref|XP_006382257.1| hypothetical protein POPTR_0005s00400g [Popu...    57   6e-06

>emb|CBI39675.3| unnamed protein product [Vitis vinifera]
          Length = 113

 Score = 66.6 bits (161), Expect = 7e-09
 Identities = 38/78 (48%), Positives = 49/78 (62%)
 Frame = -1

Query: 449 LCLHFSDPKTRDFLTKNGFSNLHRHYSGHSLASPWCLP*IWLQV*ILDMFVAYNLGLYPW 270
           LCL  S  KTR+   +NG S+LHRH  GH LA PWCLP +W+   +LD+F A    L  W
Sbjct: 32  LCL--SVTKTRE---ENG-SHLHRHSLGHHLAPPWCLPQVWMPGGVLDLFGADFFRLPSW 85

Query: 269 NHLRHLCHHQGLMNPFLV 216
           N L  LCHHQ +++  +V
Sbjct: 86  NCLCCLCHHQVIIHSLVV 103


>ref|XP_009365457.1| PREDICTED: uncharacterized protein LOC103955308 [Pyrus x
           bretschneideri]
          Length = 211

 Score = 63.9 bits (154), Expect = 5e-08
 Identities = 29/53 (54%), Positives = 36/53 (67%)
 Frame = -1

Query: 386 LHRHYSGHSLASPWCLP*IWLQV*ILDMFVAYNLGLYPWNHLRHLCHHQGLMN 228
           L RH   H LAS W LP +WL   ILD+FVA  + L+PW++L HLCHHQ + N
Sbjct: 126 LRRHPPRHPLASSWRLPQVWLPCGILDLFVADLIWLHPWDYLCHLCHHQVMSN 178


>ref|XP_006382257.1| hypothetical protein POPTR_0005s00400g [Populus trichocarpa]
           gi|566168547|ref|XP_006382258.1| hypothetical protein
           POPTR_0005s00400g [Populus trichocarpa]
           gi|550337609|gb|ERP60054.1| hypothetical protein
           POPTR_0005s00400g [Populus trichocarpa]
           gi|550337610|gb|ERP60055.1| hypothetical protein
           POPTR_0005s00400g [Populus trichocarpa]
          Length = 106

 Score = 57.0 bits (136), Expect = 6e-06
 Identities = 27/55 (49%), Positives = 41/55 (74%)
 Frame = +2

Query: 224 KDSSILGDGINGVNDSRDIAQDCKQQTYPEFKLAAKFKEDTKGRQENGQNNVYAS 388
           +  S LGDG++ +N+SR++A++   +TYP    AAK +EDTK RQ++GQ +VYAS
Sbjct: 10  RSGSSLGDGVDSINNSREVAKEGYGRTYP----AAKLEEDTKRRQDDGQQDVYAS 60


Top