BLASTX nr result

ID: Forsythia21_contig00002513 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Forsythia21_contig00002513
         (230 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_011465483.1| PREDICTED: splicing factor U2af large subuni...   149   6e-34
ref|XP_011076295.1| PREDICTED: splicing factor U2af large subuni...   148   2e-33
ref|XP_011076294.1| PREDICTED: splicing factor U2af large subuni...   146   6e-33
ref|XP_011465482.1| PREDICTED: splicing factor U2af large subuni...   145   1e-32
ref|XP_010649166.1| PREDICTED: splicing factor U2af large subuni...   145   1e-32
ref|XP_002271463.2| PREDICTED: splicing factor U2af large subuni...   145   1e-32
ref|XP_009775414.1| PREDICTED: splicing factor U2af large subuni...   144   2e-32
ref|XP_009629636.1| PREDICTED: splicing factor U2af large subuni...   144   2e-32
sp|Q9ZR40.1|U2A2B_NICPL RecName: Full=Splicing factor U2af large...   144   2e-32
ref|XP_010649165.1| PREDICTED: splicing factor U2af large subuni...   143   5e-32
ref|XP_010649167.1| PREDICTED: splicing factor U2af large subuni...   143   5e-32
gb|ABU45190.1| unknown [Capsicum frutescens]                          143   5e-32
emb|CAN68321.1| hypothetical protein VITISV_032193 [Vitis vinifera]   143   5e-32
ref|XP_010029824.1| PREDICTED: splicing factor U2af large subuni...   140   3e-31
gb|KDO79502.1| hypothetical protein CISIN_1g009052mg [Citrus sin...   140   3e-31
ref|XP_006466767.1| PREDICTED: splicing factor U2af large subuni...   140   3e-31
ref|XP_006425715.1| hypothetical protein CICLE_v10025221mg [Citr...   140   3e-31
ref|XP_006383230.1| hypothetical protein POPTR_0005s12700g [Popu...   140   3e-31
ref|XP_007046989.1| Splicing factor U2af large subunit A isoform...   140   4e-31
gb|ACD67872.1| U2 snRNP auxiliary factor large subunit [Solanum ...   139   6e-31

>ref|XP_011465483.1| PREDICTED: splicing factor U2af large subunit A isoform X4
           [Fragaria vesca subsp. vesca]
          Length = 588

 Score =  149 bits (377), Expect = 6e-34
 Identities = 70/76 (92%), Positives = 73/76 (96%)
 Frame = -1

Query: 230 TGQMPGITPPIPGMFPNMFPMASGQFGALPIMPVQAMTQQATRHARRVYVGGLPPTANEQ 51
           TGQMPG TP IPGMFPNMFP+A+GQFGALP+MPVQAMTQQATRHARRVYVGGLPPTANEQ
Sbjct: 202 TGQMPGATPTIPGMFPNMFPLATGQFGALPVMPVQAMTQQATRHARRVYVGGLPPTANEQ 261

Query: 50  SVATFFSHVMSAIGGN 3
           SVATFFSHVM AIGGN
Sbjct: 262 SVATFFSHVMHAIGGN 277


>ref|XP_011076295.1| PREDICTED: splicing factor U2af large subunit B-like isoform X2
           [Sesamum indicum] gi|747059796|ref|XP_011076296.1|
           PREDICTED: splicing factor U2af large subunit B-like
           isoform X2 [Sesamum indicum]
           gi|747059798|ref|XP_011076297.1| PREDICTED: splicing
           factor U2af large subunit B-like isoform X2 [Sesamum
           indicum]
          Length = 383

 Score =  148 bits (373), Expect = 2e-33
 Identities = 69/76 (90%), Positives = 73/76 (96%)
 Frame = -1

Query: 230 TGQMPGITPPIPGMFPNMFPMASGQFGALPIMPVQAMTQQATRHARRVYVGGLPPTANEQ 51
           TGQ+PG TP IPGMFPNM P+A+GQFGALP+MPVQAMTQQATRHARRVYVGGLPPTANEQ
Sbjct: 3   TGQLPGTTPTIPGMFPNMLPLAAGQFGALPVMPVQAMTQQATRHARRVYVGGLPPTANEQ 62

Query: 50  SVATFFSHVMSAIGGN 3
           SVATFFSHVMSAIGGN
Sbjct: 63  SVATFFSHVMSAIGGN 78


>ref|XP_011076294.1| PREDICTED: splicing factor U2af large subunit A-like isoform X1
           [Sesamum indicum]
          Length = 582

 Score =  146 bits (368), Expect = 6e-33
 Identities = 68/75 (90%), Positives = 72/75 (96%)
 Frame = -1

Query: 227 GQMPGITPPIPGMFPNMFPMASGQFGALPIMPVQAMTQQATRHARRVYVGGLPPTANEQS 48
           GQ+PG TP IPGMFPNM P+A+GQFGALP+MPVQAMTQQATRHARRVYVGGLPPTANEQS
Sbjct: 203 GQLPGTTPTIPGMFPNMLPLAAGQFGALPVMPVQAMTQQATRHARRVYVGGLPPTANEQS 262

Query: 47  VATFFSHVMSAIGGN 3
           VATFFSHVMSAIGGN
Sbjct: 263 VATFFSHVMSAIGGN 277


>ref|XP_011465482.1| PREDICTED: splicing factor U2af large subunit A isoform X3
           [Fragaria vesca subsp. vesca]
          Length = 589

 Score =  145 bits (365), Expect = 1e-32
 Identities = 70/77 (90%), Positives = 73/77 (94%), Gaps = 1/77 (1%)
 Frame = -1

Query: 230 TGQMPGITPPIPGMFPNMFPMASGQ-FGALPIMPVQAMTQQATRHARRVYVGGLPPTANE 54
           TGQMPG TP IPGMFPNMFP+A+GQ FGALP+MPVQAMTQQATRHARRVYVGGLPPTANE
Sbjct: 202 TGQMPGATPTIPGMFPNMFPLATGQQFGALPVMPVQAMTQQATRHARRVYVGGLPPTANE 261

Query: 53  QSVATFFSHVMSAIGGN 3
           QSVATFFSHVM AIGGN
Sbjct: 262 QSVATFFSHVMHAIGGN 278


>ref|XP_010649166.1| PREDICTED: splicing factor U2af large subunit B isoform X3 [Vitis
           vinifera]
          Length = 396

 Score =  145 bits (365), Expect = 1e-32
 Identities = 69/76 (90%), Positives = 72/76 (94%)
 Frame = -1

Query: 230 TGQMPGITPPIPGMFPNMFPMASGQFGALPIMPVQAMTQQATRHARRVYVGGLPPTANEQ 51
           TGQ+PG TP IPGMFPNMFP+ASGQFGALP+MPVQAMTQQATRHARRVYVGGL PTANEQ
Sbjct: 17  TGQIPGTTPTIPGMFPNMFPLASGQFGALPVMPVQAMTQQATRHARRVYVGGLSPTANEQ 76

Query: 50  SVATFFSHVMSAIGGN 3
           SVATFFS VMSAIGGN
Sbjct: 77  SVATFFSQVMSAIGGN 92


>ref|XP_002271463.2| PREDICTED: splicing factor U2af large subunit B isoform X1 [Vitis
           vinifera]
          Length = 568

 Score =  145 bits (365), Expect = 1e-32
 Identities = 69/76 (90%), Positives = 72/76 (94%)
 Frame = -1

Query: 230 TGQMPGITPPIPGMFPNMFPMASGQFGALPIMPVQAMTQQATRHARRVYVGGLPPTANEQ 51
           TGQ+PG TP IPGMFPNMFP+ASGQFGALP+MPVQAMTQQATRHARRVYVGGL PTANEQ
Sbjct: 189 TGQIPGTTPTIPGMFPNMFPLASGQFGALPVMPVQAMTQQATRHARRVYVGGLSPTANEQ 248

Query: 50  SVATFFSHVMSAIGGN 3
           SVATFFS VMSAIGGN
Sbjct: 249 SVATFFSQVMSAIGGN 264


>ref|XP_009775414.1| PREDICTED: splicing factor U2af large subunit B [Nicotiana
           sylvestris]
          Length = 570

 Score =  144 bits (363), Expect = 2e-32
 Identities = 67/75 (89%), Positives = 71/75 (94%)
 Frame = -1

Query: 227 GQMPGITPPIPGMFPNMFPMASGQFGALPIMPVQAMTQQATRHARRVYVGGLPPTANEQS 48
           GQ+PG  PPIPGMFPNMFP+ASGQFGALP+MP+QAMTQQATRHARRVYVGGLP  ANEQS
Sbjct: 192 GQVPGTNPPIPGMFPNMFPLASGQFGALPVMPIQAMTQQATRHARRVYVGGLPAHANEQS 251

Query: 47  VATFFSHVMSAIGGN 3
           VATFFSHVMSAIGGN
Sbjct: 252 VATFFSHVMSAIGGN 266


>ref|XP_009629636.1| PREDICTED: splicing factor U2af large subunit B [Nicotiana
           tomentosiformis]
          Length = 583

 Score =  144 bits (363), Expect = 2e-32
 Identities = 67/75 (89%), Positives = 71/75 (94%)
 Frame = -1

Query: 227 GQMPGITPPIPGMFPNMFPMASGQFGALPIMPVQAMTQQATRHARRVYVGGLPPTANEQS 48
           GQ+PG  PPIPGMFPNMFP+ASGQFGALP+MP+QAMTQQATRHARRVYVGGLP  ANEQS
Sbjct: 193 GQVPGTNPPIPGMFPNMFPLASGQFGALPVMPIQAMTQQATRHARRVYVGGLPAHANEQS 252

Query: 47  VATFFSHVMSAIGGN 3
           VATFFSHVMSAIGGN
Sbjct: 253 VATFFSHVMSAIGGN 267


>sp|Q9ZR40.1|U2A2B_NICPL RecName: Full=Splicing factor U2af large subunit B; AltName:
           Full=NpU2AF65b; AltName: Full=U2 auxiliary factor 65 kDa
           subunit B; AltName: Full=U2 small nuclear
           ribonucleoprotein auxiliary factor large subunit B;
           Short=U2 snRNP auxiliary factor large subunit B
           [Nicotiana plumbaginifolia] gi|3850821|emb|CAA77135.1|
           U2 snRNP auxiliary factor, large subunit [Nicotiana
           plumbaginifolia]
          Length = 573

 Score =  144 bits (363), Expect = 2e-32
 Identities = 67/75 (89%), Positives = 71/75 (94%)
 Frame = -1

Query: 227 GQMPGITPPIPGMFPNMFPMASGQFGALPIMPVQAMTQQATRHARRVYVGGLPPTANEQS 48
           GQ+PG  PPIPGMFPNMFP+ASGQFGALP+MP+QAMTQQATRHARRVYVGGLP  ANEQS
Sbjct: 195 GQVPGTNPPIPGMFPNMFPLASGQFGALPVMPIQAMTQQATRHARRVYVGGLPAHANEQS 254

Query: 47  VATFFSHVMSAIGGN 3
           VATFFSHVMSAIGGN
Sbjct: 255 VATFFSHVMSAIGGN 269


>ref|XP_010649165.1| PREDICTED: splicing factor U2af large subunit B isoform X2 [Vitis
           vinifera]
          Length = 565

 Score =  143 bits (360), Expect = 5e-32
 Identities = 68/75 (90%), Positives = 71/75 (94%)
 Frame = -1

Query: 227 GQMPGITPPIPGMFPNMFPMASGQFGALPIMPVQAMTQQATRHARRVYVGGLPPTANEQS 48
           GQ+PG TP IPGMFPNMFP+ASGQFGALP+MPVQAMTQQATRHARRVYVGGL PTANEQS
Sbjct: 187 GQIPGTTPTIPGMFPNMFPLASGQFGALPVMPVQAMTQQATRHARRVYVGGLSPTANEQS 246

Query: 47  VATFFSHVMSAIGGN 3
           VATFFS VMSAIGGN
Sbjct: 247 VATFFSQVMSAIGGN 261


>ref|XP_010649167.1| PREDICTED: splicing factor U2af large subunit B isoform X4 [Vitis
           vinifera] gi|297735185|emb|CBI17547.3| unnamed protein
           product [Vitis vinifera]
          Length = 393

 Score =  143 bits (360), Expect = 5e-32
 Identities = 68/75 (90%), Positives = 71/75 (94%)
 Frame = -1

Query: 227 GQMPGITPPIPGMFPNMFPMASGQFGALPIMPVQAMTQQATRHARRVYVGGLPPTANEQS 48
           GQ+PG TP IPGMFPNMFP+ASGQFGALP+MPVQAMTQQATRHARRVYVGGL PTANEQS
Sbjct: 15  GQIPGTTPTIPGMFPNMFPLASGQFGALPVMPVQAMTQQATRHARRVYVGGLSPTANEQS 74

Query: 47  VATFFSHVMSAIGGN 3
           VATFFS VMSAIGGN
Sbjct: 75  VATFFSQVMSAIGGN 89


>gb|ABU45190.1| unknown [Capsicum frutescens]
          Length = 551

 Score =  143 bits (360), Expect = 5e-32
 Identities = 68/76 (89%), Positives = 71/76 (93%)
 Frame = -1

Query: 230 TGQMPGITPPIPGMFPNMFPMASGQFGALPIMPVQAMTQQATRHARRVYVGGLPPTANEQ 51
           TGQ+PG  P IPGMF NMFP+A+GQFGALPIMPVQAMTQQATRHARRVYVGGLPPTANEQ
Sbjct: 172 TGQVPGANPSIPGMFSNMFPLAAGQFGALPIMPVQAMTQQATRHARRVYVGGLPPTANEQ 231

Query: 50  SVATFFSHVMSAIGGN 3
           SVATFFSHVM AIGGN
Sbjct: 232 SVATFFSHVMYAIGGN 247


>emb|CAN68321.1| hypothetical protein VITISV_032193 [Vitis vinifera]
          Length = 565

 Score =  143 bits (360), Expect = 5e-32
 Identities = 68/75 (90%), Positives = 71/75 (94%)
 Frame = -1

Query: 227 GQMPGITPPIPGMFPNMFPMASGQFGALPIMPVQAMTQQATRHARRVYVGGLPPTANEQS 48
           GQ+PG TP IPGMFPNMFP+ASGQFGALP+MPVQAMTQQATRHARRVYVGGL PTANEQS
Sbjct: 187 GQIPGTTPTIPGMFPNMFPLASGQFGALPVMPVQAMTQQATRHARRVYVGGLSPTANEQS 246

Query: 47  VATFFSHVMSAIGGN 3
           VATFFS VMSAIGGN
Sbjct: 247 VATFFSQVMSAIGGN 261


>ref|XP_010029824.1| PREDICTED: splicing factor U2af large subunit A-like isoform X4
           [Eucalyptus grandis]
          Length = 613

 Score =  140 bits (354), Expect = 3e-31
 Identities = 65/76 (85%), Positives = 70/76 (92%)
 Frame = -1

Query: 230 TGQMPGITPPIPGMFPNMFPMASGQFGALPIMPVQAMTQQATRHARRVYVGGLPPTANEQ 51
           TGQ+PG  P IPGMFPNMFP+ +GQFG LP+MPVQAMTQQATRHARRVYVGGLPPTANEQ
Sbjct: 234 TGQIPGTAPTIPGMFPNMFPLGAGQFGTLPVMPVQAMTQQATRHARRVYVGGLPPTANEQ 293

Query: 50  SVATFFSHVMSAIGGN 3
           SVATFFS VM+AIGGN
Sbjct: 294 SVATFFSQVMAAIGGN 309


>gb|KDO79502.1| hypothetical protein CISIN_1g009052mg [Citrus sinensis]
          Length = 544

 Score =  140 bits (353), Expect = 3e-31
 Identities = 65/75 (86%), Positives = 70/75 (93%)
 Frame = -1

Query: 227 GQMPGITPPIPGMFPNMFPMASGQFGALPIMPVQAMTQQATRHARRVYVGGLPPTANEQS 48
           GQ+PG  P IPGMFPNMFP+ +GQFGALP+MPVQAMTQQATRHARRVYVGGLPPTANEQS
Sbjct: 201 GQIPGANPAIPGMFPNMFPLVTGQFGALPVMPVQAMTQQATRHARRVYVGGLPPTANEQS 260

Query: 47  VATFFSHVMSAIGGN 3
           VATFFS VM+AIGGN
Sbjct: 261 VATFFSQVMAAIGGN 275


>ref|XP_006466767.1| PREDICTED: splicing factor U2af large subunit B-like isoform X5
           [Citrus sinensis]
          Length = 380

 Score =  140 bits (353), Expect = 3e-31
 Identities = 65/75 (86%), Positives = 70/75 (93%)
 Frame = -1

Query: 227 GQMPGITPPIPGMFPNMFPMASGQFGALPIMPVQAMTQQATRHARRVYVGGLPPTANEQS 48
           GQ+PG  P IPGMFPNMFP+ +GQFGALP+MPVQAMTQQATRHARRVYVGGLPPTANEQS
Sbjct: 2   GQIPGANPAIPGMFPNMFPLVTGQFGALPVMPVQAMTQQATRHARRVYVGGLPPTANEQS 61

Query: 47  VATFFSHVMSAIGGN 3
           VATFFS VM+AIGGN
Sbjct: 62  VATFFSQVMAAIGGN 76


>ref|XP_006425715.1| hypothetical protein CICLE_v10025221mg [Citrus clementina]
           gi|557527705|gb|ESR38955.1| hypothetical protein
           CICLE_v10025221mg [Citrus clementina]
          Length = 592

 Score =  140 bits (353), Expect = 3e-31
 Identities = 65/75 (86%), Positives = 70/75 (93%)
 Frame = -1

Query: 227 GQMPGITPPIPGMFPNMFPMASGQFGALPIMPVQAMTQQATRHARRVYVGGLPPTANEQS 48
           GQ+PG  P IPGMFPNMFP+ +GQFGALP+MPVQAMTQQATRHARRVYVGGLPPTANEQS
Sbjct: 214 GQIPGANPAIPGMFPNMFPLVTGQFGALPVMPVQAMTQQATRHARRVYVGGLPPTANEQS 273

Query: 47  VATFFSHVMSAIGGN 3
           VATFFS VM+AIGGN
Sbjct: 274 VATFFSQVMAAIGGN 288


>ref|XP_006383230.1| hypothetical protein POPTR_0005s12700g [Populus trichocarpa]
           gi|550338812|gb|ERP61027.1| hypothetical protein
           POPTR_0005s12700g [Populus trichocarpa]
          Length = 588

 Score =  140 bits (353), Expect = 3e-31
 Identities = 65/76 (85%), Positives = 71/76 (93%)
 Frame = -1

Query: 230 TGQMPGITPPIPGMFPNMFPMASGQFGALPIMPVQAMTQQATRHARRVYVGGLPPTANEQ 51
           +GQ+ G TPPIPGMFPNMFP+ + QFGALP+MPVQAMTQQATRHARRVYVGGLPPTANEQ
Sbjct: 205 SGQIAGTTPPIPGMFPNMFPLGTSQFGALPVMPVQAMTQQATRHARRVYVGGLPPTANEQ 264

Query: 50  SVATFFSHVMSAIGGN 3
           SVATFFS VM+AIGGN
Sbjct: 265 SVATFFSQVMAAIGGN 280


>ref|XP_007046989.1| Splicing factor U2af large subunit A isoform 1 [Theobroma cacao]
           gi|508699250|gb|EOX91146.1| Splicing factor U2af large
           subunit A isoform 1 [Theobroma cacao]
          Length = 584

 Score =  140 bits (352), Expect = 4e-31
 Identities = 63/76 (82%), Positives = 72/76 (94%)
 Frame = -1

Query: 230 TGQMPGITPPIPGMFPNMFPMASGQFGALPIMPVQAMTQQATRHARRVYVGGLPPTANEQ 51
           TGQ+PG  P +PG+FPNMFP+A+GQFGALP+MP+QAMTQQATRHARRVYVGGLPPTANEQ
Sbjct: 205 TGQIPGTNPALPGVFPNMFPLATGQFGALPVMPIQAMTQQATRHARRVYVGGLPPTANEQ 264

Query: 50  SVATFFSHVMSAIGGN 3
           SVAT+FS VM+AIGGN
Sbjct: 265 SVATYFSQVMAAIGGN 280


>gb|ACD67872.1| U2 snRNP auxiliary factor large subunit [Solanum melongena]
          Length = 554

 Score =  139 bits (351), Expect = 6e-31
 Identities = 68/76 (89%), Positives = 72/76 (94%), Gaps = 1/76 (1%)
 Frame = -1

Query: 227 GQMPGIT-PPIPGMFPNMFPMASGQFGALPIMPVQAMTQQATRHARRVYVGGLPPTANEQ 51
           GQ+PGIT P IPGMF NMFP+A+GQFGALP+MPVQAMTQQATRHARRVYVGGLPPTANEQ
Sbjct: 173 GQVPGITNPSIPGMFSNMFPVAAGQFGALPVMPVQAMTQQATRHARRVYVGGLPPTANEQ 232

Query: 50  SVATFFSHVMSAIGGN 3
           SVATFFSHVM AIGGN
Sbjct: 233 SVATFFSHVMYAIGGN 248


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