BLASTX nr result
ID: Forsythia21_contig00002219
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Forsythia21_contig00002219
(3402 letters)
Database: ./nr
69,698,275 sequences; 24,982,196,650 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_011071821.1| PREDICTED: RNA-dependent RNA polymerase 2 [S... 1680 0.0
ref|XP_009623301.1| PREDICTED: RNA-dependent RNA polymerase 2 [N... 1523 0.0
ref|XP_009796585.1| PREDICTED: RNA-dependent RNA polymerase 2 [N... 1518 0.0
gb|AAU21243.1| putative RNA-dependent RNA polymerase RdRP2 [Nico... 1513 0.0
emb|CDP19325.1| unnamed protein product [Coffea canephora] 1510 0.0
ref|XP_006345040.1| PREDICTED: RNA-dependent RNA polymerase 2-li... 1509 0.0
ref|XP_012831187.1| PREDICTED: RNA-dependent RNA polymerase 2 [E... 1506 0.0
ref|XP_004236120.1| PREDICTED: RNA-dependent RNA polymerase 2 [S... 1489 0.0
ref|XP_002280099.1| PREDICTED: RNA-dependent RNA polymerase 2 [V... 1453 0.0
ref|XP_007211312.1| hypothetical protein PRUPE_ppa000513mg [Prun... 1434 0.0
gb|AHL27587.1| RNA-dependent RNA polymerase 4 [Salvia miltiorrhiza] 1426 0.0
ref|XP_012080101.1| PREDICTED: RNA-dependent RNA polymerase 2 is... 1414 0.0
ref|XP_007036161.1| RNA-dependent RNA polymerase 2 isoform 1 [Th... 1406 0.0
ref|XP_008239735.1| PREDICTED: LOW QUALITY PROTEIN: RNA-dependen... 1405 0.0
ref|XP_010107450.1| RNA-dependent RNA polymerase 2 [Morus notabi... 1399 0.0
ref|XP_006476748.1| PREDICTED: RNA-dependent RNA polymerase 2-li... 1386 0.0
gb|KDO69723.1| hypothetical protein CISIN_1g001183mg [Citrus sin... 1384 0.0
ref|XP_004508850.1| PREDICTED: RNA-dependent RNA polymerase 2 [C... 1380 0.0
gb|KHG14638.1| RNA-dependent RNA polymerase 2 -like protein [Gos... 1379 0.0
ref|NP_001267608.1| RNA-dependent RNA polymerase 2-like [Cucumis... 1377 0.0
>ref|XP_011071821.1| PREDICTED: RNA-dependent RNA polymerase 2 [Sesamum indicum]
Length = 1133
Score = 1680 bits (4351), Expect = 0.0
Identities = 818/1087 (75%), Positives = 934/1087 (85%)
Frame = -2
Query: 3263 RQTLTARVLNIPQNAIAKELFTFLESTLGKGTIFACEIFTEYNNWKSRGHGRIQFDTPEA 3084
R TLT +V NIPQ AIA+EL +FLESTLGKGT+FA EIFTE+ NWKSRGHGR+QFD+PEA
Sbjct: 10 RPTLTVKVSNIPQTAIAQELLSFLESTLGKGTVFAIEIFTEHKNWKSRGHGRVQFDSPEA 69
Query: 3083 KNQALLLSQQKKLFFRGSHLSLFLAFDDIISRPLEPRNRVGDGMGVVLFAGMMIRGDCFG 2904
K +AL LS+Q+KL F+G ++S+ +F+D+I RP+EPRNRVG G G+VL AG+M+R DC G
Sbjct: 70 KIKALSLSEQRKLLFKGFYISISPSFEDVIIRPVEPRNRVGYGGGMVLLAGVMVRADCMG 129
Query: 2903 ILEFWDGVKLWVVPERKKLELFLTHEGESYKLEVQFGDVLETYGCCLDGDKQKVDAILLK 2724
ILE WDGV+LW +PERKKLE F+ HEGE YKLEVQFGDVLET GC LDGD +KVDAILLK
Sbjct: 130 ILESWDGVRLWFMPERKKLEFFVNHEGECYKLEVQFGDVLETRGCYLDGDGKKVDAILLK 189
Query: 2723 LKYAPKVYRKVSGSDVASKFRTDRYHICKEDFDFLWVRTTDFSSVKSIGYLSSLCWKIEQ 2544
LK+APKVYRK+SG VASKF TDRYHICKEDFDFLWVRTTDFS++KSIGYLSSLCW+IE+
Sbjct: 190 LKHAPKVYRKISGPKVASKFATDRYHICKEDFDFLWVRTTDFSNLKSIGYLSSLCWEIEE 249
Query: 2543 GSSNVDIYTCLPYYKKDVRELALIEGKKFRSASNMVPLVTNHSDFKLGYEVLFQLNSLVH 2364
G S+ DIY+ LPYY KDV EL L G KF +S++VPLVTN+ DFKL YEVLFQL SLVH
Sbjct: 250 GLSSSDIYSSLPYYSKDVMELTLEGGVKFNHSSDLVPLVTNYPDFKLPYEVLFQLISLVH 309
Query: 2363 THKMSLASVDTDLFQVLSRLDIDSAVLVLQKMHKLESTCFEPVSFITSHWHVINKDGKNL 2184
T KMSLA+VDTDLFQ+L RLD+D+A+L+L KMHKL STC++P SFI + + + GK++
Sbjct: 310 TQKMSLAAVDTDLFQILGRLDVDTALLILNKMHKLHSTCYDPKSFIKNQSSITGQSGKSM 369
Query: 2183 TSASYNRLMNQNVMSCHRVLVTPSKIYCSGPELETSNYIVKNFASYASDFLRVTFVDEDW 2004
T+ + RL +QNVMSCHRVLVTPSKIYC GPELETSNYIVKNFASYASDFLRVTFVDEDW
Sbjct: 370 TAVASKRLTDQNVMSCHRVLVTPSKIYCMGPELETSNYIVKNFASYASDFLRVTFVDEDW 429
Query: 2003 GRLPAGAISTSIKRGIFARPHRTDVYDRILSVLRDGIAIGDKRFEFLAFSASQLRSNSVW 1824
GRLPA A+S SI++GIFA+P+RTD+Y RILSVLRDGI IGDK F+FLAFSASQLRSN+VW
Sbjct: 430 GRLPATAVSMSIEQGIFAKPYRTDIYHRILSVLRDGIIIGDKNFQFLAFSASQLRSNAVW 489
Query: 1823 MFASNEHVKAEDIREWMGCFNKIRSVSKCAARMGQLFSSSMQTMKVLPREVKVIPDIEVI 1644
MFASN+HVKAEDIREWMGCFNKIRS+SKCAARMGQLFSSSMQT++V PR+ +IPDIEV
Sbjct: 490 MFASNDHVKAEDIREWMGCFNKIRSISKCAARMGQLFSSSMQTLEVHPRDYDLIPDIEVT 549
Query: 1643 SDGVGYCFSDGIGKISCAFAREISRKLGLSHIPSAFQIRYGGYKGVIVVDRSSYVKLALR 1464
+DGV YCFSDGIGKIS AFA++I+RKLGL HIPSAFQIRYGGYKGVI VDR S+ KLALR
Sbjct: 550 TDGVKYCFSDGIGKISYAFAKDIARKLGLPHIPSAFQIRYGGYKGVIAVDRKSFRKLALR 609
Query: 1463 GSMLKFESKNWMLNVTKWSESMPCYLNREIIILLSTLGIEDDVFXXXXXXXXXXXXXXLT 1284
SM KFES N+MLN+TKWSES PCYLNREII LLSTLG+ED +F LT
Sbjct: 610 ESMRKFESNNYMLNITKWSESQPCYLNREIITLLSTLGVEDCIFLAMQDEQLQHLGKMLT 669
Query: 1283 NREAALKVLESMGGSDGKGVLARMLRQGYEPNREPYLSTMLQSQYENQLSDLRSRSRVFV 1104
+EAAL VLES GG + K +LARML QGYEPN+EPYL TMLQS ENQLSDLRSR R+FV
Sbjct: 670 KKEAALNVLESTGGGEMKSILARMLLQGYEPNKEPYLLTMLQSHLENQLSDLRSRCRIFV 729
Query: 1103 PKGRVLVGCLDETGLLEYGQVYVRITMNKSELQCGEQIFFHKVDSTTSVLKGKVVVTKNP 924
P+GRVLVGCLDET LEYGQVYVR+TMNKSELQCG+Q +F +VD TTSV+KGKVVVTKNP
Sbjct: 730 PRGRVLVGCLDETATLEYGQVYVRLTMNKSELQCGDQRYFQRVDETTSVVKGKVVVTKNP 789
Query: 923 CLHPGDVRVLEAVYDAELDEKDLVDCLIFPQKGERPHPNECSGGDLDGDQYFISWDENLI 744
CLHPGDVRVLEAV D +L E +LVDCL+FPQKG+RPHPNECSGGDLDGD YFISWDENLI
Sbjct: 790 CLHPGDVRVLEAVCDIKLQENNLVDCLVFPQKGDRPHPNECSGGDLDGDLYFISWDENLI 849
Query: 743 PARTVEPMDYTGRRPRIMDHDVTLEEIHRFFVDYMVGDTLGAISTAHLVHADREPDKALS 564
P RTV+PMDYTGRRPRIMDHDVTLEEI +FF DYM+ DTLG ISTAHL+HADREP+KALS
Sbjct: 850 PPRTVDPMDYTGRRPRIMDHDVTLEEIEKFFADYMISDTLGTISTAHLIHADREPEKALS 909
Query: 563 SKCLELASLQSMAVDFAKSGAPAEMPRSLKPREFPDFMERWEKPMYISQGALGKIYRAII 384
KCLELA+L SMAVDFAK+GAPAEMPR+LKPREFPDFMERWEKPMYIS+G LGK+YRA I
Sbjct: 910 PKCLELATLHSMAVDFAKTGAPAEMPRTLKPREFPDFMERWEKPMYISRGVLGKLYRATI 969
Query: 383 ESHRHMNTNFDCSSIISQDAYDQDLIVDGYEAFLETAESHKEQYLDRMSTLLNFYEAKSE 204
+ + S+ IS DA+D DL+VDGYE FLETAESHK QYLD+M TLLN+Y A+SE
Sbjct: 970 QFIHKTKPTTNVSNKISSDAFDHDLLVDGYEDFLETAESHKAQYLDKMETLLNYYGAESE 1029
Query: 203 VEILTGNMRNKSMYLQRDNRRFGEVKDRILGSAKSLQKEAKGWFESCCSGTDQQQLASAW 24
VEILTG+M+ KS YLQRDNRR+GEVKDRI+ S KSL KE KGWF S CS +QQ+LASAW
Sbjct: 1030 VEILTGDMQKKSAYLQRDNRRYGEVKDRIMVSVKSLMKEVKGWFRSSCSEAEQQKLASAW 1089
Query: 23 YYVTYHP 3
Y+VTYHP
Sbjct: 1090 YFVTYHP 1096
>ref|XP_009623301.1| PREDICTED: RNA-dependent RNA polymerase 2 [Nicotiana tomentosiformis]
Length = 1120
Score = 1523 bits (3944), Expect = 0.0
Identities = 747/1093 (68%), Positives = 901/1093 (82%), Gaps = 1/1093 (0%)
Frame = -2
Query: 3278 IAMEERQTLTARVLNIPQNAIAKELFTFLESTLGKGTIFACEIFTEYNNWKSRGHGRIQF 3099
+ +E+R T T RV NIPQ AIAK+LF F ES++GKG++FAC+IF+E+ NWKSRGHGR+QF
Sbjct: 1 MGVEKRITATVRVSNIPQTAIAKQLFDFFESSIGKGSVFACDIFSEHKNWKSRGHGRVQF 60
Query: 3098 DTPEAKNQALLLSQQKKLFFRGSHLSLFLAFDDIISRPLEPRNRVGDGMGVVLFAGMMIR 2919
+T ++K Q+L LS+Q KL F+G L L +FDDII+RP+EP R G +L G++++
Sbjct: 61 ETAQSKLQSLSLSEQGKLVFKGHQLILTSSFDDIIARPIEPNYRFQKG---ILHTGVLLK 117
Query: 2918 GDCFGILEFWDGVKLWVVPERKKLELFLTH-EGESYKLEVQFGDVLETYGCCLDGDKQKV 2742
D +LE W+ VK ++PERK LE +++H +GE Y+LEVQFGD++ET GC L+ +K
Sbjct: 118 NDYMEVLETWENVKTLIMPERKSLEFWVSHAKGECYRLEVQFGDIIETCGCSLEDEKP-- 175
Query: 2741 DAILLKLKYAPKVYRKVSGSDVASKFRTDRYHICKEDFDFLWVRTTDFSSVKSIGYLSSL 2562
A+LLKLK+APK+Y++VSG VASKF +DRYH+CKED +FLWVRTTDFS++KSIG SSL
Sbjct: 176 -ALLLKLKHAPKLYQRVSGPGVASKFSSDRYHVCKEDCEFLWVRTTDFSAMKSIGCSSSL 234
Query: 2561 CWKIEQGSSNVDIYTCLPYYKKDVRELALIEGKKFRSASNMVPLVTNHSDFKLGYEVLFQ 2382
CW+IE G + D+ + LPY DV +L L E SAS +VPL + SD KL YE+LFQ
Sbjct: 235 CWEIEDGLLSSDLLSSLPYCNNDVMDLVLDEVGDIYSASELVPLASFPSDLKLPYEILFQ 294
Query: 2381 LNSLVHTHKMSLASVDTDLFQVLSRLDIDSAVLVLQKMHKLESTCFEPVSFITSHWHVIN 2202
LNSLVHTHK+SL +V TDL +VLS+L++D+A+++LQKMHKL+S+CFEPV FI + HV+
Sbjct: 295 LNSLVHTHKISLGAVKTDLIEVLSKLELDTAMMILQKMHKLQSSCFEPVPFIKTRLHVLG 354
Query: 2201 KDGKNLTSASYNRLMNQNVMSCHRVLVTPSKIYCSGPELETSNYIVKNFASYASDFLRVT 2022
K+ KN S+SY+RL+NQN+MS HRVLVTPSK+YC GPELETSNYIVKNFAS+ASDFLRVT
Sbjct: 355 KNSKNQPSSSYSRLVNQNMMSVHRVLVTPSKVYCLGPELETSNYIVKNFASHASDFLRVT 414
Query: 2021 FVDEDWGRLPAGAISTSIKRGIFARPHRTDVYDRILSVLRDGIAIGDKRFEFLAFSASQL 1842
FV+EDW +L AIS S+++GIFA+P+RT +Y RILS+LRDG+ IG KRF FLAFSASQL
Sbjct: 415 FVEEDWSKLSPNAISISVEQGIFAKPYRTKIYHRILSILRDGLVIGTKRFLFLAFSASQL 474
Query: 1841 RSNSVWMFASNEHVKAEDIREWMGCFNKIRSVSKCAARMGQLFSSSMQTMKVLPREVKVI 1662
RSNSVWMFASNE+VKAEDIREWMG FNKIRSVSKCAARMGQLFS+S QTM+V V+++
Sbjct: 475 RSNSVWMFASNEYVKAEDIREWMGYFNKIRSVSKCAARMGQLFSTSFQTMEVQSPHVEIL 534
Query: 1661 PDIEVISDGVGYCFSDGIGKISCAFAREISRKLGLSHIPSAFQIRYGGYKGVIVVDRSSY 1482
PDIEV SDGV YCFSDGIGKIS AFA ++++K GLS+ PSAFQIRYGGYKGVI VDR+SY
Sbjct: 535 PDIEVTSDGVSYCFSDGIGKISQAFASQVAQKCGLSYTPSAFQIRYGGYKGVIAVDRNSY 594
Query: 1481 VKLALRGSMLKFESKNWMLNVTKWSESMPCYLNREIIILLSTLGIEDDVFXXXXXXXXXX 1302
KL+LRGSMLKFESKN MLN+TKWS++MPCYLNREI+ILL+TLG+ED V
Sbjct: 595 RKLSLRGSMLKFESKNKMLNITKWSDAMPCYLNREIVILLATLGVEDKVLEDLLDNHLHL 654
Query: 1301 XXXXLTNREAALKVLESMGGSDGKGVLARMLRQGYEPNREPYLSTMLQSQYENQLSDLRS 1122
LT EAAL VLES+GG D K +L RML QGY PN EPYLS MLQS +ENQLSDLRS
Sbjct: 655 LGKMLTTNEAALDVLESIGGGDVKRILMRMLHQGYAPNLEPYLSMMLQSHFENQLSDLRS 714
Query: 1121 RSRVFVPKGRVLVGCLDETGLLEYGQVYVRITMNKSELQCGEQIFFHKVDSTTSVLKGKV 942
R R+F+PKGRVLVGCLDETG+L YGQVY RITM K+ELQ G+Q FF KVD TT+V++GKV
Sbjct: 715 RCRIFIPKGRVLVGCLDETGILNYGQVYARITMTKAELQSGQQNFFQKVDETTAVVRGKV 774
Query: 941 VVTKNPCLHPGDVRVLEAVYDAELDEKDLVDCLIFPQKGERPHPNECSGGDLDGDQYFIS 762
VVTKNPCLHPGDVRVLEAVY+ L+EK VDC+IFPQKGERPHPNECSGGDLDGD YFIS
Sbjct: 775 VVTKNPCLHPGDVRVLEAVYEVALEEKAWVDCIIFPQKGERPHPNECSGGDLDGDLYFIS 834
Query: 761 WDENLIPARTVEPMDYTGRRPRIMDHDVTLEEIHRFFVDYMVGDTLGAISTAHLVHADRE 582
WDENLIP +TV PMDYTGR+PRIMDH+VTLEEI RFFVDYM+ DTLGAISTAHLVHADRE
Sbjct: 835 WDENLIPRQTVTPMDYTGRKPRIMDHEVTLEEIQRFFVDYMISDTLGAISTAHLVHADRE 894
Query: 581 PDKALSSKCLELASLQSMAVDFAKSGAPAEMPRSLKPREFPDFMERWEKPMYISQGALGK 402
PDKAL+ KCL+LA+L SMAVDFAK+GA AEMPR LKPREFPDF+ERW+KPMYIS+G LGK
Sbjct: 895 PDKALNPKCLQLATLHSMAVDFAKTGAAAEMPRFLKPREFPDFLERWDKPMYISEGVLGK 954
Query: 401 IYRAIIESHRHMNTNFDCSSIISQDAYDQDLIVDGYEAFLETAESHKEQYLDRMSTLLNF 222
+YRAI++S N++ S QDAYD DL+ +GYEAF+ TA++HKE YLDRM++LLN+
Sbjct: 955 LYRAIVKSSVRGNSDDLGSVRAIQDAYDHDLLFEGYEAFIVTAKNHKEMYLDRMNSLLNY 1014
Query: 221 YEAKSEVEILTGNMRNKSMYLQRDNRRFGEVKDRILGSAKSLQKEAKGWFESCCSGTDQQ 42
Y A+ EVEILTGN+R KS+YLQRDNRR+ E+KDRIL SAKSLQKE KGWF CC +++
Sbjct: 1015 YGAEKEVEILTGNLRQKSVYLQRDNRRYFELKDRILVSAKSLQKEVKGWFTGCCKEDEKK 1074
Query: 41 QLASAWYYVTYHP 3
+LASAWY VTYHP
Sbjct: 1075 KLASAWYQVTYHP 1087
>ref|XP_009796585.1| PREDICTED: RNA-dependent RNA polymerase 2 [Nicotiana sylvestris]
Length = 1120
Score = 1518 bits (3929), Expect = 0.0
Identities = 746/1093 (68%), Positives = 898/1093 (82%), Gaps = 1/1093 (0%)
Frame = -2
Query: 3278 IAMEERQTLTARVLNIPQNAIAKELFTFLESTLGKGTIFACEIFTEYNNWKSRGHGRIQF 3099
+ +E+R T T RV NIPQ AIAK+LF F ES++ KG++FAC+IF+E+ NWKSRGHGR+QF
Sbjct: 1 MGVEKRVTATVRVSNIPQTAIAKQLFDFFESSIRKGSVFACDIFSEHKNWKSRGHGRVQF 60
Query: 3098 DTPEAKNQALLLSQQKKLFFRGSHLSLFLAFDDIISRPLEPRNRVGDGMGVVLFAGMMIR 2919
+T ++K QAL LS+Q KL F+G L L +FDDII RP+EP R G +L G++++
Sbjct: 61 ETSQSKLQALSLSEQGKLIFKGHQLILTSSFDDIIVRPIEPNYRFQKG---ILHTGVLLK 117
Query: 2918 GDCFGILEFWDGVKLWVVPERKKLELFLTH-EGESYKLEVQFGDVLETYGCCLDGDKQKV 2742
D +LE W+ VK ++PERK LE ++++ +GE Y+LEVQFGD++ET GC L+ +K
Sbjct: 118 NDYMEVLETWENVKTLIMPERKSLEFWVSYAKGECYRLEVQFGDIIETCGCSLEDEKP-- 175
Query: 2741 DAILLKLKYAPKVYRKVSGSDVASKFRTDRYHICKEDFDFLWVRTTDFSSVKSIGYLSSL 2562
A+LLKLK+APK+Y++VSG VASKF +DRYH+CKED +FLWVRTTDFS++KSIG SSL
Sbjct: 176 -ALLLKLKHAPKLYQRVSGPGVASKFSSDRYHVCKEDCEFLWVRTTDFSAMKSIGCSSSL 234
Query: 2561 CWKIEQGSSNVDIYTCLPYYKKDVRELALIEGKKFRSASNMVPLVTNHSDFKLGYEVLFQ 2382
CW+IE G N D+ + LPY DV +L L E SAS +VPL + SD KL YE+LFQ
Sbjct: 235 CWEIEDGLLNSDLLSSLPYCNNDVMDLVLDEVGDIYSASELVPLASFPSDLKLPYEILFQ 294
Query: 2381 LNSLVHTHKMSLASVDTDLFQVLSRLDIDSAVLVLQKMHKLESTCFEPVSFITSHWHVIN 2202
LNSLVH+HK+SL +V TDL +VLS+L++D+A+++LQKMHKL+STCFEPV FI + HV+
Sbjct: 295 LNSLVHSHKISLGAVKTDLIEVLSKLELDTAMMILQKMHKLQSTCFEPVPFIKTRLHVLG 354
Query: 2201 KDGKNLTSASYNRLMNQNVMSCHRVLVTPSKIYCSGPELETSNYIVKNFASYASDFLRVT 2022
K KN S+SY+RL+NQN+MS HRVLVTPSK+YC GPELETSNYIVKNFAS+ASDFLRVT
Sbjct: 355 KTSKNQPSSSYSRLVNQNMMSVHRVLVTPSKVYCLGPELETSNYIVKNFASHASDFLRVT 414
Query: 2021 FVDEDWGRLPAGAISTSIKRGIFARPHRTDVYDRILSVLRDGIAIGDKRFEFLAFSASQL 1842
FV+EDW +L AIS S+++GIFA+P+RT +Y RILS+LRDG+ IG K+F FLAFSASQL
Sbjct: 415 FVEEDWSKLSPNAISMSVEQGIFAKPYRTKIYHRILSILRDGLDIGTKKFLFLAFSASQL 474
Query: 1841 RSNSVWMFASNEHVKAEDIREWMGCFNKIRSVSKCAARMGQLFSSSMQTMKVLPREVKVI 1662
RSNSVWMFASNE+VKAEDIREWMGCFNKIRSVSKCAARMGQLFS+S QTM+V V+++
Sbjct: 475 RSNSVWMFASNEYVKAEDIREWMGCFNKIRSVSKCAARMGQLFSTSFQTMEVQSPHVEIL 534
Query: 1661 PDIEVISDGVGYCFSDGIGKISCAFAREISRKLGLSHIPSAFQIRYGGYKGVIVVDRSSY 1482
PDIEV SDGV YCFSDGIGKIS AFA ++++K GLS+ PSAFQIRYGGYKGVI VDR+S+
Sbjct: 535 PDIEVTSDGVSYCFSDGIGKISQAFASQVAQKCGLSYTPSAFQIRYGGYKGVIAVDRNSF 594
Query: 1481 VKLALRGSMLKFESKNWMLNVTKWSESMPCYLNREIIILLSTLGIEDDVFXXXXXXXXXX 1302
KL+LRGSMLKFESKN MLN+TKWS++MPCYLNREI+ILLSTLG+ED V
Sbjct: 595 RKLSLRGSMLKFESKNRMLNITKWSDAMPCYLNREIVILLSTLGVEDKVLEDLLDNHLHL 654
Query: 1301 XXXXLTNREAALKVLESMGGSDGKGVLARMLRQGYEPNREPYLSTMLQSQYENQLSDLRS 1122
LT EAAL VLES+GG D K +L RML QGY PN EPYLS MLQS +ENQLSDLRS
Sbjct: 655 LGKMLTTNEAALDVLESIGGGDVKRILMRMLHQGYAPNLEPYLSMMLQSHFENQLSDLRS 714
Query: 1121 RSRVFVPKGRVLVGCLDETGLLEYGQVYVRITMNKSELQCGEQIFFHKVDSTTSVLKGKV 942
R R+F+PKGRVLVGCLDETG+L YGQVY RITM K+ELQ G+Q FF +VD TT+V++GKV
Sbjct: 715 RCRIFIPKGRVLVGCLDETGILNYGQVYARITMTKAELQSGQQNFFQQVDETTAVVRGKV 774
Query: 941 VVTKNPCLHPGDVRVLEAVYDAELDEKDLVDCLIFPQKGERPHPNECSGGDLDGDQYFIS 762
VVTKNPCLHPGDVRVLEAVY+ L+EK VDC+IFPQKGERPHPNECSGGDLDGD YFIS
Sbjct: 775 VVTKNPCLHPGDVRVLEAVYEVALEEKAWVDCIIFPQKGERPHPNECSGGDLDGDLYFIS 834
Query: 761 WDENLIPARTVEPMDYTGRRPRIMDHDVTLEEIHRFFVDYMVGDTLGAISTAHLVHADRE 582
W ENLIP +TV PMDYTGRRPRIMDH+VTLEEI RFFVDYM+ DTLGAISTAHLVHADRE
Sbjct: 835 WAENLIPRQTVTPMDYTGRRPRIMDHEVTLEEIQRFFVDYMISDTLGAISTAHLVHADRE 894
Query: 581 PDKALSSKCLELASLQSMAVDFAKSGAPAEMPRSLKPREFPDFMERWEKPMYISQGALGK 402
PDKAL+ KCL+LA+L SMAVDFAK+GA AEMPR LKPREFPDF+ERW+KPMYIS+G LGK
Sbjct: 895 PDKALNPKCLQLATLHSMAVDFAKTGAAAEMPRFLKPREFPDFLERWDKPMYISEGVLGK 954
Query: 401 IYRAIIESHRHMNTNFDCSSIISQDAYDQDLIVDGYEAFLETAESHKEQYLDRMSTLLNF 222
+YRAI++S N++ S QDAYD DL+ +GYEAF+ETA++HKE YLDRM++LLN+
Sbjct: 955 LYRAIVKSSVRGNSDDLGSVRAIQDAYDHDLLFEGYEAFIETAKNHKEMYLDRMNSLLNY 1014
Query: 221 YEAKSEVEILTGNMRNKSMYLQRDNRRFGEVKDRILGSAKSLQKEAKGWFESCCSGTDQQ 42
Y A+ EVEILTGN+R KS+YLQRDNRR+ E+KDRIL SAKSLQKE KGWF C + +
Sbjct: 1015 YGAEKEVEILTGNLRQKSVYLQRDNRRYFELKDRILVSAKSLQKEVKGWFTGYCKEDEHK 1074
Query: 41 QLASAWYYVTYHP 3
+LASAWY+VTYHP
Sbjct: 1075 KLASAWYHVTYHP 1087
>gb|AAU21243.1| putative RNA-dependent RNA polymerase RdRP2 [Nicotiana benthamiana]
Length = 1120
Score = 1513 bits (3916), Expect = 0.0
Identities = 743/1093 (67%), Positives = 894/1093 (81%), Gaps = 1/1093 (0%)
Frame = -2
Query: 3278 IAMEERQTLTARVLNIPQNAIAKELFTFLESTLGKGTIFACEIFTEYNNWKSRGHGRIQF 3099
+ +E+R T T RV NIPQ AIAK+LF F ES++GKG++FAC+IF+E+ NWKSRGHGR+QF
Sbjct: 1 MGVEKRVTATVRVSNIPQTAIAKQLFDFFESSIGKGSVFACDIFSEHKNWKSRGHGRVQF 60
Query: 3098 DTPEAKNQALLLSQQKKLFFRGSHLSLFLAFDDIISRPLEPRNRVGDGMGVVLFAGMMIR 2919
+T ++K Q+L LS+Q KL F+G L L +FDDII+RP+E R G +L G+++
Sbjct: 61 ETSQSKLQSLSLSEQGKLVFKGHQLILTSSFDDIIARPIELNYRFQKG---ILHTGILLE 117
Query: 2918 GDCFGILEFWDGVKLWVVPERKKLELFLTH-EGESYKLEVQFGDVLETYGCCLDGDKQKV 2742
D +LE W+ VK ++PERK LE +++H +GE Y+LEVQFGD++ET C L+ +K
Sbjct: 118 NDYMEVLETWENVKTLIMPERKSLEFWVSHAKGECYRLEVQFGDIIETCECSLEDEKT-- 175
Query: 2741 DAILLKLKYAPKVYRKVSGSDVASKFRTDRYHICKEDFDFLWVRTTDFSSVKSIGYLSSL 2562
A+LLKLK+APK+Y++VSG VASKF +DRYH+C+ED +FLWVRTTDFS++KSIG SS
Sbjct: 176 -ALLLKLKHAPKLYQRVSGPGVASKFSSDRYHVCEEDCEFLWVRTTDFSAMKSIGCSSSP 234
Query: 2561 CWKIEQGSSNVDIYTCLPYYKKDVRELALIEGKKFRSASNMVPLVTNHSDFKLGYEVLFQ 2382
CW+IE G + D+ + LPY DV +L L E SAS +VPL + SD KL YE+LFQ
Sbjct: 235 CWEIEDGLLSSDLLSGLPYCNNDVMDLVLDEVGDIYSASELVPLASFPSDLKLPYEILFQ 294
Query: 2381 LNSLVHTHKMSLASVDTDLFQVLSRLDIDSAVLVLQKMHKLESTCFEPVSFITSHWHVIN 2202
LNSL+HTHK+SL +V TDL +VLS+L++D+A+++LQKMHKL+STCFEPV FI + HV+
Sbjct: 295 LNSLIHTHKISLGAVKTDLIEVLSKLELDTAMMILQKMHKLQSTCFEPVPFIKTRLHVLG 354
Query: 2201 KDGKNLTSASYNRLMNQNVMSCHRVLVTPSKIYCSGPELETSNYIVKNFASYASDFLRVT 2022
K+ KN S+SY+RL+NQN+MS HRVLVTPSK+YC GPELETSNYIVKNFA +ASDFLRVT
Sbjct: 355 KNSKNQPSSSYSRLVNQNMMSVHRVLVTPSKVYCLGPELETSNYIVKNFALHASDFLRVT 414
Query: 2021 FVDEDWGRLPAGAISTSIKRGIFARPHRTDVYDRILSVLRDGIAIGDKRFEFLAFSASQL 1842
FV+EDWG+L AIS S+++GIFA+P+RT +Y RILS+LRDG+ IG KRF FLAFSASQL
Sbjct: 415 FVEEDWGKLSPNAISMSVEQGIFAKPYRTKIYHRILSILRDGLVIGSKRFLFLAFSASQL 474
Query: 1841 RSNSVWMFASNEHVKAEDIREWMGCFNKIRSVSKCAARMGQLFSSSMQTMKVLPREVKVI 1662
RSNSVWMFASNEHVKAEDIREWMGCFNKIRSVSKCAARMGQLFS+S QTM+V V+++
Sbjct: 475 RSNSVWMFASNEHVKAEDIREWMGCFNKIRSVSKCAARMGQLFSTSFQTMEVQSPHVEIL 534
Query: 1661 PDIEVISDGVGYCFSDGIGKISCAFAREISRKLGLSHIPSAFQIRYGGYKGVIVVDRSSY 1482
PDIEV SDGV YCFSDGIGKIS AFA ++++K GLS+ PSAFQIRYGGYKGVI VDR+S+
Sbjct: 535 PDIEVTSDGVSYCFSDGIGKISQAFASQVAQKCGLSYTPSAFQIRYGGYKGVIAVDRNSF 594
Query: 1481 VKLALRGSMLKFESKNWMLNVTKWSESMPCYLNREIIILLSTLGIEDDVFXXXXXXXXXX 1302
KL+LRGSMLKFESKN MLN+TKWS++MPCYLNREI+ILLSTLG+ED VF
Sbjct: 595 RKLSLRGSMLKFESKNRMLNITKWSDAMPCYLNREIVILLSTLGVEDKVFEDLLDNHLHL 654
Query: 1301 XXXXLTNREAALKVLESMGGSDGKGVLARMLRQGYEPNREPYLSTMLQSQYENQLSDLRS 1122
LT EAAL VLES+GG D K +L RML QGY PN EPYLS MLQS +ENQLSDLRS
Sbjct: 655 LGKMLTTNEAALDVLESIGGGDVKKILMRMLHQGYAPNLEPYLSMMLQSHFENQLSDLRS 714
Query: 1121 RSRVFVPKGRVLVGCLDETGLLEYGQVYVRITMNKSELQCGEQIFFHKVDSTTSVLKGKV 942
R R+F+ KGRVLVGCLDETG+L YGQVY RITM K+ELQ +Q FF KVD TT+V++G V
Sbjct: 715 RCRIFIHKGRVLVGCLDETGILNYGQVYARITMTKAELQSAQQSFFQKVDETTAVVRGNV 774
Query: 941 VVTKNPCLHPGDVRVLEAVYDAELDEKDLVDCLIFPQKGERPHPNECSGGDLDGDQYFIS 762
VVTKNPCLHPGDVRVLEAVY+ L+EK VDC+IFPQKGERPHPNECSGGDLDGD YFIS
Sbjct: 775 VVTKNPCLHPGDVRVLEAVYEVALEEKAWVDCIIFPQKGERPHPNECSGGDLDGDLYFIS 834
Query: 761 WDENLIPARTVEPMDYTGRRPRIMDHDVTLEEIHRFFVDYMVGDTLGAISTAHLVHADRE 582
WDENLIP +TV PMDYTGRR RIMDH+VTL+EI RFFVDYM+ DTLGAISTAHLVHADRE
Sbjct: 835 WDENLIPRQTVTPMDYTGRRTRIMDHEVTLQEIQRFFVDYMISDTLGAISTAHLVHADRE 894
Query: 581 PDKALSSKCLELASLQSMAVDFAKSGAPAEMPRSLKPREFPDFMERWEKPMYISQGALGK 402
PDKAL+ KCL+LA+L SMAVDFAK+GA AEMPR LKPREFPDF+ERW+KPMYIS+G LGK
Sbjct: 895 PDKALNPKCLQLATLHSMAVDFAKTGAAAEMPRFLKPREFPDFLERWDKPMYISEGVLGK 954
Query: 401 IYRAIIESHRHMNTNFDCSSIISQDAYDQDLIVDGYEAFLETAESHKEQYLDRMSTLLNF 222
+YRAI+ S N++ S QDAYD L+ DGYEAF+ETA++HKE YLDRM++LLN+
Sbjct: 955 LYRAIVNSSVRSNSDDLGSVRAIQDAYDHALLFDGYEAFIETAKNHKETYLDRMNSLLNY 1014
Query: 221 YEAKSEVEILTGNMRNKSMYLQRDNRRFGEVKDRILGSAKSLQKEAKGWFESCCSGTDQQ 42
Y A+ EVEILTGN+R KS+YLQRDNRR+ E+KDRIL SAKSLQKE KGWF CC + +
Sbjct: 1015 YGAEKEVEILTGNLRQKSVYLQRDNRRYFELKDRILVSAKSLQKEVKGWFTGCCKEDEHK 1074
Query: 41 QLASAWYYVTYHP 3
+LASAWY+VTYHP
Sbjct: 1075 KLASAWYHVTYHP 1087
>emb|CDP19325.1| unnamed protein product [Coffea canephora]
Length = 1120
Score = 1510 bits (3910), Expect = 0.0
Identities = 734/1092 (67%), Positives = 897/1092 (82%)
Frame = -2
Query: 3278 IAMEERQTLTARVLNIPQNAIAKELFTFLESTLGKGTIFACEIFTEYNNWKSRGHGRIQF 3099
+A+EER T T RV NIPQ+A AK+L F +ST+G+ T+FA EIF+E+ NWKSRGHG++QF
Sbjct: 1 MAVEERTTATVRVQNIPQSANAKDLLAFFQSTIGEDTVFAIEIFSEHKNWKSRGHGKVQF 60
Query: 3098 DTPEAKNQALLLSQQKKLFFRGSHLSLFLAFDDIISRPLEPRNRVGDGMGVVLFAGMMIR 2919
+T EAK + L LS++ KLFF+GSHL L + D++I RP++ + R+ +G VL G+++R
Sbjct: 61 ETLEAKIKCLSLSEKGKLFFKGSHLRLSHSIDEVIFRPVDSKLRIKNG---VLRTGILLR 117
Query: 2918 GDCFGILEFWDGVKLWVVPERKKLELFLTHEGESYKLEVQFGDVLETYGCCLDGDKQKVD 2739
DC +LE WDGVK+W++PER LE +L+H GE YKLEVQFGDVLE+ GCCLD Q +
Sbjct: 118 NDCMSVLERWDGVKVWIMPERNILEFWLSHGGECYKLEVQFGDVLESCGCCLDD--QNPN 175
Query: 2738 AILLKLKYAPKVYRKVSGSDVASKFRTDRYHICKEDFDFLWVRTTDFSSVKSIGYLSSLC 2559
A+LLKLK+APK+Y+K SG +VA+KF DRYH CKEDFDF+WVRTTDFSS+KSIGY SSLC
Sbjct: 176 AVLLKLKHAPKIYQKFSGPNVAAKFSADRYHTCKEDFDFIWVRTTDFSSIKSIGYSSSLC 235
Query: 2558 WKIEQGSSNVDIYTCLPYYKKDVRELALIEGKKFRSASNMVPLVTNHSDFKLGYEVLFQL 2379
+IE+G S +D++T LPY + EL L EG++F + S +VPLV SD K+ YE+LFQL
Sbjct: 236 LEIEEGLSGLDLFTNLPYCSRFFLELTLEEGEQFSTTSELVPLVKCCSDIKITYEILFQL 295
Query: 2378 NSLVHTHKMSLASVDTDLFQVLSRLDIDSAVLVLQKMHKLESTCFEPVSFITSHWHVINK 2199
NSLVHT K+SL +V+++L +VLS LD+D A+ +LQKMHKLE+ C++PVSFI HV+ +
Sbjct: 296 NSLVHTQKLSLGAVNSELMEVLSGLDMDIAMPILQKMHKLETMCYDPVSFINKRLHVMGE 355
Query: 2198 DGKNLTSASYNRLMNQNVMSCHRVLVTPSKIYCSGPELETSNYIVKNFASYASDFLRVTF 2019
+ NL S+SY R N N+M+CHRVLVTPSK+YC GPELETSNYIVKNFASYASDFLRVTF
Sbjct: 356 NASNLRSSSYGRPKNNNMMTCHRVLVTPSKVYCLGPELETSNYIVKNFASYASDFLRVTF 415
Query: 2018 VDEDWGRLPAGAISTSIKRGIFARPHRTDVYDRILSVLRDGIAIGDKRFEFLAFSASQLR 1839
V+EDWG+L ++TS RG+FA+ ++T++Y RILS+L+DGI IG+KRF FLAFSASQLR
Sbjct: 416 VEEDWGKLSPSVVNTSFGRGLFAKNYKTNIYHRILSILKDGIVIGEKRFLFLAFSASQLR 475
Query: 1838 SNSVWMFASNEHVKAEDIREWMGCFNKIRSVSKCAARMGQLFSSSMQTMKVLPREVKVIP 1659
SNSVWMFASNE+++AEDIR+WMGCFNKIRSVSKCAARMGQLFSSS+QT++V P++V+VIP
Sbjct: 476 SNSVWMFASNENLRAEDIRDWMGCFNKIRSVSKCAARMGQLFSSSLQTLEVPPQQVEVIP 535
Query: 1658 DIEVISDGVGYCFSDGIGKISCAFAREISRKLGLSHIPSAFQIRYGGYKGVIVVDRSSYV 1479
DIE+ +DG +CFSDGIGKIS FAR++++K GL++ PSAFQIRYGGYKGVI VDR S+
Sbjct: 536 DIEMTTDGENHCFSDGIGKISQGFARQVAQKCGLNYTPSAFQIRYGGYKGVIAVDRYSFR 595
Query: 1478 KLALRGSMLKFESKNWMLNVTKWSESMPCYLNREIIILLSTLGIEDDVFXXXXXXXXXXX 1299
KL+LR SMLKFESKN MLNVTKWSE+MPCYLNREII LLSTLG+ED VF
Sbjct: 596 KLSLRSSMLKFESKNRMLNVTKWSEAMPCYLNREIITLLSTLGVEDQVFLAMQYEQLHLL 655
Query: 1298 XXXLTNREAALKVLESMGGSDGKGVLARMLRQGYEPNREPYLSTMLQSQYENQLSDLRSR 1119
LT+REAAL VL SMG ++ K ++ RMLRQG+EP EPYLS +LQS ENQLSDLRSR
Sbjct: 656 DKMLTHREAALDVLASMGVNETKSIVVRMLRQGFEPEIEPYLSMILQSHRENQLSDLRSR 715
Query: 1118 SRVFVPKGRVLVGCLDETGLLEYGQVYVRITMNKSELQCGEQIFFHKVDSTTSVLKGKVV 939
R+FVPKGRVL+GCLDETG+L+YGQVY+RITM K+ELQ GEQ FF KVD TT+++KGKVV
Sbjct: 716 CRIFVPKGRVLLGCLDETGILDYGQVYIRITMTKTELQIGEQCFFQKVDETTAIVKGKVV 775
Query: 938 VTKNPCLHPGDVRVLEAVYDAELDEKDLVDCLIFPQKGERPHPNECSGGDLDGDQYFISW 759
VTKNPCLHPGDVRVLEAVY+ L E+ +VDC++FP KG RPHPNECSGGDLDGD YF+SW
Sbjct: 776 VTKNPCLHPGDVRVLEAVYEFSLQERGMVDCILFPLKGVRPHPNECSGGDLDGDLYFVSW 835
Query: 758 DENLIPARTVEPMDYTGRRPRIMDHDVTLEEIHRFFVDYMVGDTLGAISTAHLVHADREP 579
DENLIP +TV PMDY RR RI+DHDVTLEEI FFV YM+ DTLG ISTAHL+HADREP
Sbjct: 836 DENLIPFQTVTPMDYIDRRKRIVDHDVTLEEIQSFFVGYMISDTLGTISTAHLIHADREP 895
Query: 578 DKALSSKCLELASLQSMAVDFAKSGAPAEMPRSLKPREFPDFMERWEKPMYISQGALGKI 399
DKALS KCL+LA+L SMAVDFAK+G PAEMPR LKPREFPDFMERW+KPMY SQGALGK+
Sbjct: 896 DKALSPKCLQLATLHSMAVDFAKTGTPAEMPRFLKPREFPDFMERWDKPMYTSQGALGKL 955
Query: 398 YRAIIESHRHMNTNFDCSSIISQDAYDQDLIVDGYEAFLETAESHKEQYLDRMSTLLNFY 219
YRA I S ++F S+ I QDAYD +L++DGYE FL TA+ HKE Y+D++STLL +Y
Sbjct: 956 YRATIASRVPGKSSFVFSAKIVQDAYDDELLIDGYEYFLGTAQCHKEMYVDKISTLLTYY 1015
Query: 218 EAKSEVEILTGNMRNKSMYLQRDNRRFGEVKDRILGSAKSLQKEAKGWFESCCSGTDQQQ 39
A++E EILTGN+RNKSMYLQRDNRR+ E+KDRIL + KSLQKEA+ WFES C +Q +
Sbjct: 1016 GAETEEEILTGNLRNKSMYLQRDNRRYFELKDRILVAIKSLQKEARSWFESSCRAAEQMK 1075
Query: 38 LASAWYYVTYHP 3
LASAWY+VTYHP
Sbjct: 1076 LASAWYHVTYHP 1087
>ref|XP_006345040.1| PREDICTED: RNA-dependent RNA polymerase 2-like [Solanum tuberosum]
Length = 1119
Score = 1509 bits (3906), Expect = 0.0
Identities = 737/1092 (67%), Positives = 894/1092 (81%)
Frame = -2
Query: 3278 IAMEERQTLTARVLNIPQNAIAKELFTFLESTLGKGTIFACEIFTEYNNWKSRGHGRIQF 3099
+ +E+R T T RV NIPQ+AIAK+LF F +S +GKG++FAC+IF+E+ NWKSRGHGR+QF
Sbjct: 1 MGVEKRATATVRVSNIPQSAIAKDLFDFFDSLIGKGSVFACDIFSEHKNWKSRGHGRVQF 60
Query: 3098 DTPEAKNQALLLSQQKKLFFRGSHLSLFLAFDDIISRPLEPRNRVGDGMGVVLFAGMMIR 2919
+T + K L LS+Q L F+G LSL +FDDII+RP+EP+ R DG +L G++++
Sbjct: 61 ETLQDKLHCLSLSEQGNLLFKGHQLSLVSSFDDIIARPVEPKCRFQDG---ILHTGLLVK 117
Query: 2918 GDCFGILEFWDGVKLWVVPERKKLELFLTHEGESYKLEVQFGDVLETYGCCLDGDKQKVD 2739
D +LE W+ VK ++PERK LE +++H E Y+LEVQFGDV+E C L+ K
Sbjct: 118 NDVMQVLETWEDVKTLIMPERKCLEFWVSHAEECYRLEVQFGDVVEATVCSLENQKS--- 174
Query: 2738 AILLKLKYAPKVYRKVSGSDVASKFRTDRYHICKEDFDFLWVRTTDFSSVKSIGYLSSLC 2559
A+LLKLK+APK+Y++VSG VASKF DRYHICKED +FLWVRTTDFS++KSIG SSLC
Sbjct: 175 ALLLKLKHAPKLYQRVSGPAVASKFSADRYHICKEDCEFLWVRTTDFSNIKSIGCSSSLC 234
Query: 2558 WKIEQGSSNVDIYTCLPYYKKDVRELALIEGKKFRSASNMVPLVTNHSDFKLGYEVLFQL 2379
W+ E G + D+ + LP KDV +L L + S S VPLV SD KL YE+LFQL
Sbjct: 235 WETEDGWLSSDLLSSLPCCNKDVIDLDLDKVGDIYSGSEFVPLVRIPSDLKLPYEILFQL 294
Query: 2378 NSLVHTHKMSLASVDTDLFQVLSRLDIDSAVLVLQKMHKLESTCFEPVSFITSHWHVINK 2199
NSLV T K+SL +V+ DL +VLS+L++D+A+++LQKMHKL+STCFEP++FI + HV+ K
Sbjct: 295 NSLVQTQKISLGAVNPDLIEVLSKLELDTAMMILQKMHKLQSTCFEPLTFIKTRLHVLGK 354
Query: 2198 DGKNLTSASYNRLMNQNVMSCHRVLVTPSKIYCSGPELETSNYIVKNFASYASDFLRVTF 2019
+ KN S+SY+RL+N ++MS HRVLVTPSKIYC GPELETSNYIVKNFA +ASDFLRVTF
Sbjct: 355 NNKNQLSSSYSRLVNHSMMSVHRVLVTPSKIYCLGPELETSNYIVKNFAEHASDFLRVTF 414
Query: 2018 VDEDWGRLPAGAISTSIKRGIFARPHRTDVYDRILSVLRDGIAIGDKRFEFLAFSASQLR 1839
V+EDWG+L A+S S+++GIFA+P+RT +Y RILS+LR+GI IG KRF FLAFSASQLR
Sbjct: 415 VEEDWGKLFPNAVSMSVEQGIFAKPYRTKIYHRILSILREGIVIGTKRFFFLAFSASQLR 474
Query: 1838 SNSVWMFASNEHVKAEDIREWMGCFNKIRSVSKCAARMGQLFSSSMQTMKVLPREVKVIP 1659
SNSVWMFASNE+VKAEDIREWMGCFNKIRS+SKCAARMGQLFS+S+QTM+V + V+++P
Sbjct: 475 SNSVWMFASNEYVKAEDIREWMGCFNKIRSISKCAARMGQLFSTSVQTMEVQLQHVEILP 534
Query: 1658 DIEVISDGVGYCFSDGIGKISCAFAREISRKLGLSHIPSAFQIRYGGYKGVIVVDRSSYV 1479
DIEV SDGV YCFSDGIGKIS AFAR++++K GL+H PSAFQIRYGGYKGVI VDR+S+
Sbjct: 535 DIEVTSDGVSYCFSDGIGKISQAFARQVAQKCGLNHTPSAFQIRYGGYKGVIAVDRNSFR 594
Query: 1478 KLALRGSMLKFESKNWMLNVTKWSESMPCYLNREIIILLSTLGIEDDVFXXXXXXXXXXX 1299
KL+LRGSMLKFESKN MLN+TKWS++MPCYLNREI+ILLSTLG+ED
Sbjct: 595 KLSLRGSMLKFESKNRMLNITKWSDAMPCYLNREIVILLSTLGVEDKALEDLLDNHLRLL 654
Query: 1298 XXXLTNREAALKVLESMGGSDGKGVLARMLRQGYEPNREPYLSTMLQSQYENQLSDLRSR 1119
LT EAAL VLESMGG D K +L RML QGY PNREPYLS MLQS +ENQ+SDLRSR
Sbjct: 655 GKMLTTNEAALDVLESMGGGDVKKILMRMLLQGYAPNREPYLSMMLQSHFENQISDLRSR 714
Query: 1118 SRVFVPKGRVLVGCLDETGLLEYGQVYVRITMNKSELQCGEQIFFHKVDSTTSVLKGKVV 939
R+F+PKGR+LVGCLDETG+L+YG+VYVRITM K+ELQ G+Q FF KVD TT+V++GKVV
Sbjct: 715 CRIFIPKGRILVGCLDETGILKYGEVYVRITMTKAELQNGQQNFFQKVDETTAVVRGKVV 774
Query: 938 VTKNPCLHPGDVRVLEAVYDAELDEKDLVDCLIFPQKGERPHPNECSGGDLDGDQYFISW 759
VTKNPCLHPGDVRVLEAVY+ L+EK VDC+IFPQ GERPHPNECSGGDLDGD YFI W
Sbjct: 775 VTKNPCLHPGDVRVLEAVYEVTLEEKTWVDCIIFPQNGERPHPNECSGGDLDGDLYFICW 834
Query: 758 DENLIPARTVEPMDYTGRRPRIMDHDVTLEEIHRFFVDYMVGDTLGAISTAHLVHADREP 579
DE+LIP +TV PMDYTGRRPRIMDH+VTLEEI RFFVDYM+ DTLGAISTAHLVHADREP
Sbjct: 835 DESLIPHQTVTPMDYTGRRPRIMDHEVTLEEIQRFFVDYMISDTLGAISTAHLVHADREP 894
Query: 578 DKALSSKCLELASLQSMAVDFAKSGAPAEMPRSLKPREFPDFMERWEKPMYISQGALGKI 399
DKAL+SKCL+LA+L SMAVDFAK+GA AEMPR LKPREFPDFMERW+KPMYIS+G LGK+
Sbjct: 895 DKALNSKCLQLATLHSMAVDFAKTGAAAEMPRFLKPREFPDFMERWDKPMYISEGVLGKL 954
Query: 398 YRAIIESHRHMNTNFDCSSIISQDAYDQDLIVDGYEAFLETAESHKEQYLDRMSTLLNFY 219
YR +I+S+ N++ + QDAYD DL+V+GYEAF+ETA++HKE YLD M++LLN+Y
Sbjct: 955 YRGVIKSYIRRNSDDLSTDRAIQDAYDHDLLVEGYEAFIETAKTHKEMYLDSMNSLLNYY 1014
Query: 218 EAKSEVEILTGNMRNKSMYLQRDNRRFGEVKDRILGSAKSLQKEAKGWFESCCSGTDQQQ 39
A+ EVEILTGN+R KS+YLQRDNRR+ E+KDRIL SAKSL KE KGWF CC+ D Q+
Sbjct: 1015 GAEKEVEILTGNLRQKSVYLQRDNRRYFELKDRILVSAKSLHKEVKGWFSGCCTEDDHQK 1074
Query: 38 LASAWYYVTYHP 3
L SAWY+VTYHP
Sbjct: 1075 LVSAWYHVTYHP 1086
>ref|XP_012831187.1| PREDICTED: RNA-dependent RNA polymerase 2 [Erythranthe guttatus]
gi|604343689|gb|EYU42543.1| hypothetical protein
MIMGU_mgv1a000463mg [Erythranthe guttata]
Length = 1135
Score = 1506 bits (3900), Expect = 0.0
Identities = 746/1095 (68%), Positives = 887/1095 (81%), Gaps = 8/1095 (0%)
Frame = -2
Query: 3263 RQTLTARVLNIPQNAIAKELFTFLESTLGKGTIFACEIFTEYNNWKSRGHGRIQFDTPEA 3084
R TLT +V NIPQ IA EL TFLES +GKGTIFA EIFTE NWKSRGHGR+QF+ EA
Sbjct: 5 RPTLTVKVQNIPQTIIAHELQTFLESAVGKGTIFAVEIFTERTNWKSRGHGRVQFEEQEA 64
Query: 3083 KNQALLLSQQKKLFFRGSHLSLFLAFDDIISRPLEPRNRVGDGMGVVLFAGMMIRGDCFG 2904
K +AL LS+Q L F+G LS+ + +D+I RP++P NRVG+ G AG+M+R +C
Sbjct: 65 KIKALSLSEQGNLIFKGFRLSILPSSEDVIIRPVDPTNRVGNCAGSGFVAGVMVRDNCMA 124
Query: 2903 ILEFWDGVKLWVVPERKKLELFLTHEGESYKLEVQFGDVLETYGCCLDGDKQKVDAILLK 2724
+LE W G LW +PERK+L+ + ++GESYKLEVQFGDV E+ CCLD +KVDAILLK
Sbjct: 125 VLENWVG-DLWFMPERKRLDFVVIYDGESYKLEVQFGDVAESGRCCLDRGGEKVDAILLK 183
Query: 2723 LKYAPKVYRKVSGSDVASKF-RTDRYHICKEDFDFLWVRTTDFSSVKSIGYLSSLCWKIE 2547
LK+APKVY+K+SG V+S+F TDRY ICKEDFDF WVRTTDFS VKSIGYLSSLCW+I+
Sbjct: 184 LKHAPKVYKKISGPKVSSRFPATDRYRICKEDFDFAWVRTTDFSKVKSIGYLSSLCWEIK 243
Query: 2546 QGSSNVDIYTCLPYYKKDVRELALIEGKKFRSA--SNMVPLVTNHSDFKLGYEVLFQLNS 2373
+G S++D YT LP + KDV EL L +G +F +A S++VP++ N DF++ YEVLFQ+NS
Sbjct: 244 EGFSSLDAYTSLPCFSKDVIELYLEDGARFNNAPSSDLVPIIPNCPDFRVPYEVLFQINS 303
Query: 2372 LVHTHKMSLASVDTDLFQVLSRLDIDSAVLVLQKMHKLESTCFEPVSFITSHWHVINKDG 2193
LVHT KMSLASVD +LFQ LS LD+D A+L+L KMHKL STC+EP SFI + + +
Sbjct: 304 LVHTQKMSLASVDNNLFQTLSELDMDRALLILAKMHKLHSTCYEPKSFIETRSSMSIHNV 363
Query: 2192 KNLTSASYNRLMNQNVMSCHRVLVTPSKIYCSGPELETSNYIVKNFASYASDFLRVTFVD 2013
KNL S S+ RL + NVMSCHR+LVTPS+I+C GPELE+SNYIVKNFAS+ASDF+RVTFVD
Sbjct: 364 KNLPSESFKRLKDHNVMSCHRILVTPSRIFCVGPELESSNYIVKNFASHASDFVRVTFVD 423
Query: 2012 EDWGRLPAGAISTSIKRGIFARPHRTDVYDRILSVLRDGIAIGDKRFEFLAFSASQLRSN 1833
EDWGR+ A ++STSI RGIF++P+RTD+Y RILS+LRDGI IGDK+FEFLAFSASQLRSN
Sbjct: 424 EDWGRISANSVSTSINRGIFSKPYRTDIYRRILSILRDGIVIGDKKFEFLAFSASQLRSN 483
Query: 1832 SVWMFASNEHVKAEDIREWMGCFNKIRSVSKCAARMGQLFSSSMQTMKVLPREVKVIPDI 1653
SVWMFAS+E +KA++IREWMG F KIRS++KCAARMGQLFSSS+QT+ V PR+V +IPDI
Sbjct: 484 SVWMFASSETLKADNIREWMGSFTKIRSIAKCAARMGQLFSSSVQTLTVQPRDVDLIPDI 543
Query: 1652 EVISDGVGYCFSDGIGKISCAFAREISRKLGLSHIPSAFQIRYGGYKGVIVVDRSSYVKL 1473
EV +D V YCFSDGIGK+S AFARE+ +KLGLSH+PSAFQIRYGGYKGV+VVDR S+ KL
Sbjct: 544 EVTTDYVKYCFSDGIGKMSYAFAREVVKKLGLSHMPSAFQIRYGGYKGVVVVDRHSFRKL 603
Query: 1472 ALRGSMLKFESKNWMLNVTKWSESMPCYLNREIIILLSTLGIEDDVFXXXXXXXXXXXXX 1293
LRGSM KFES N MLN+TKWSES PCYLNREII LLSTLG+ED V
Sbjct: 604 GLRGSMRKFESDNCMLNITKWSESQPCYLNREIITLLSTLGVEDGVLLAMQDEQLKQLGK 663
Query: 1292 XLTNREAALKVLESMGGSDGKGVLARMLRQGYEPNREPYLSTMLQSQYENQLSDLRSRSR 1113
L +EAAL VLE+ GG + K VL RML +GY+P++EPYL ML+S ENQLSDLRSR R
Sbjct: 664 ILIEKEAALNVLEAAGGGEMKRVLTRMLTEGYQPSKEPYLCMMLKSHLENQLSDLRSRGR 723
Query: 1112 VFVPKGRVLVGCLDETGLLEYGQVYVRITMNKSELQCGEQIFFHKVDSTTSVLKGKVVVT 933
+FVPKGRVLVG LDETG LEYGQVYVRITM SE++ G Q FFH++D TT+VLKGKVVVT
Sbjct: 724 IFVPKGRVLVGVLDETGNLEYGQVYVRITMTMSEIESGNQRFFHRIDETTAVLKGKVVVT 783
Query: 932 KNPCLHPGDVRVLEAVYDAELDEKDLVDCLIFPQKGERPHPNECSGGDLDGDQYFISWDE 753
KNPCLHPGDVRVLEAV D +L E +LVDCL+FPQKG+RPHPNECSGGDLDGD YF+SWDE
Sbjct: 784 KNPCLHPGDVRVLEAVLDVKLQENNLVDCLVFPQKGDRPHPNECSGGDLDGDLYFVSWDE 843
Query: 752 NLIPARTVEPMDYTGRRPRIMDHDVTLEEIHRFFVDYMVGDTLGAISTAHLVHADREPDK 573
NL+P RTV+PMDYTGRRPRIMDHDVTLEEI RFF DYM+ DTLG ISTAHL+HADREP+K
Sbjct: 844 NLVPPRTVDPMDYTGRRPRIMDHDVTLEEIQRFFADYMISDTLGTISTAHLIHADREPEK 903
Query: 572 ALSSKCLELASLQSMAVDFAKSGAPAEMPRSLKPREFPDFMERWEKPMYISQGALGKIYR 393
AL +KCLELA+L SMAVDFAKSGAPAEMPR+LKPREFPDFMER+E+P YIS+G LGK+YR
Sbjct: 904 ALDAKCLELATLHSMAVDFAKSGAPAEMPRALKPREFPDFMERFEQPTYISKGVLGKLYR 963
Query: 392 AIIESHRHMNTNF--DCSSIISQDAYDQDLIVDGYEAFLETAESHKEQYLDRMSTLLNFY 219
A ++ N N + + I D +DQDL++DGYE+F+E A+ HKE YLDRM +LL +Y
Sbjct: 964 ATVQFIDQSNDNHSDEKNKISPHDYFDQDLVIDGYESFVEIAKEHKEMYLDRMDSLLRYY 1023
Query: 218 EAKSEVEILTGNMRNKSMYLQRDNRRFGEVKDRILGSAKSLQKEAKGWFESCCSGT---D 48
A SEVEILTGN R KS YLQRDNRR+GEV+DR+L + KSL KE KGW S C D
Sbjct: 1024 GAASEVEILTGNFRKKSDYLQRDNRRYGEVRDRVLVAVKSLMKEVKGWLRSGCDEAVEED 1083
Query: 47 QQQLASAWYYVTYHP 3
Q++LA+AWYYVTYHP
Sbjct: 1084 QRKLAAAWYYVTYHP 1098
>ref|XP_004236120.1| PREDICTED: RNA-dependent RNA polymerase 2 [Solanum lycopersicum]
Length = 1119
Score = 1489 bits (3856), Expect = 0.0
Identities = 728/1092 (66%), Positives = 890/1092 (81%)
Frame = -2
Query: 3278 IAMEERQTLTARVLNIPQNAIAKELFTFLESTLGKGTIFACEIFTEYNNWKSRGHGRIQF 3099
+ +E+R T T RV NIPQ+AIAK+L F +S +GKG++FAC+I +E+ NWKSRGHGR+QF
Sbjct: 1 MGVEKRATATVRVSNIPQSAIAKDLSNFFDSLIGKGSVFACDIHSEHKNWKSRGHGRVQF 60
Query: 3098 DTPEAKNQALLLSQQKKLFFRGSHLSLFLAFDDIISRPLEPRNRVGDGMGVVLFAGMMIR 2919
+T + K L L++Q L F+G LSL +FDDII+RP+EP+ R G +L G+++
Sbjct: 61 ETLQDKLHCLSLAEQGNLLFKGHQLSLVSSFDDIITRPVEPKCRFQAG---ILHTGLLVE 117
Query: 2918 GDCFGILEFWDGVKLWVVPERKKLELFLTHEGESYKLEVQFGDVLETYGCCLDGDKQKVD 2739
D +LE W+ VK ++PERK LE +++H E Y+LEVQFGDV E C ++ K
Sbjct: 118 KDVMQVLETWEDVKTLIMPERKCLEFWVSHAEECYRLEVQFGDVTEGTLCSVENQKS--- 174
Query: 2738 AILLKLKYAPKVYRKVSGSDVASKFRTDRYHICKEDFDFLWVRTTDFSSVKSIGYLSSLC 2559
A+LLKLK+APK+Y++VSG VASKF DRYHICKED +FLW+RTTDFS++KSIG SSLC
Sbjct: 175 ALLLKLKHAPKLYQRVSGPAVASKFSADRYHICKEDCEFLWIRTTDFSNIKSIGCSSSLC 234
Query: 2558 WKIEQGSSNVDIYTCLPYYKKDVRELALIEGKKFRSASNMVPLVTNHSDFKLGYEVLFQL 2379
W+ E G + D+++ LP +DV +L L + S S VPLV SD KL YE+LFQL
Sbjct: 235 WETEDGWLSSDLFSSLPCCNQDVIDLDLDKVGDIYSGSEFVPLVRIPSDLKLPYEILFQL 294
Query: 2378 NSLVHTHKMSLASVDTDLFQVLSRLDIDSAVLVLQKMHKLESTCFEPVSFITSHWHVINK 2199
NSLV T K+SL +++ +L +VLS+L++D+A+++LQKMHKL+S CF+P+ FI + HV+ K
Sbjct: 295 NSLVQTQKISLGAINPNLIEVLSKLELDTAMMILQKMHKLQSICFDPLLFIKTRLHVLGK 354
Query: 2198 DGKNLTSASYNRLMNQNVMSCHRVLVTPSKIYCSGPELETSNYIVKNFASYASDFLRVTF 2019
+ KN S+SY+RL+N ++MS HRVLVTPSKIYC GPELETSNYIVKNFAS+ASDFLRVTF
Sbjct: 355 NNKNRPSSSYSRLVNHSMMSVHRVLVTPSKIYCLGPELETSNYIVKNFASHASDFLRVTF 414
Query: 2018 VDEDWGRLPAGAISTSIKRGIFARPHRTDVYDRILSVLRDGIAIGDKRFEFLAFSASQLR 1839
V+EDWG+L A+S S+++GIFA+P+RT +Y RILS+LR+GI IG KRF FLAFSASQLR
Sbjct: 415 VEEDWGKLFPNAVSMSVEQGIFAKPYRTKIYHRILSILREGIVIGTKRFFFLAFSASQLR 474
Query: 1838 SNSVWMFASNEHVKAEDIREWMGCFNKIRSVSKCAARMGQLFSSSMQTMKVLPREVKVIP 1659
SNSVWMFASNE+VKAEDIREWMGCFNKIRS+SKCAARMGQLFS+S+QTM+V + V+++P
Sbjct: 475 SNSVWMFASNEYVKAEDIREWMGCFNKIRSISKCAARMGQLFSTSVQTMEVKLQHVEILP 534
Query: 1658 DIEVISDGVGYCFSDGIGKISCAFAREISRKLGLSHIPSAFQIRYGGYKGVIVVDRSSYV 1479
DIEV SDGV YCFSDGIGKIS AFAR++++K GL+H PSAFQIRYGGYKGVI VDR+S+
Sbjct: 535 DIEVTSDGVSYCFSDGIGKISQAFARQVAQKCGLNHTPSAFQIRYGGYKGVIAVDRNSFR 594
Query: 1478 KLALRGSMLKFESKNWMLNVTKWSESMPCYLNREIIILLSTLGIEDDVFXXXXXXXXXXX 1299
KL+LRGSMLKFESKN MLN+TKWS++MPCYLNREI+ILLSTLG+ED F
Sbjct: 595 KLSLRGSMLKFESKNRMLNITKWSDAMPCYLNREIVILLSTLGVEDKAFEDLLDNHLCLL 654
Query: 1298 XXXLTNREAALKVLESMGGSDGKGVLARMLRQGYEPNREPYLSTMLQSQYENQLSDLRSR 1119
LT EAAL VLESMGG + K +L RML QGY PN+EPYLS MLQS +ENQ+SDLRSR
Sbjct: 655 GKMLTTNEAALDVLESMGGGEVKKILMRMLLQGYAPNQEPYLSMMLQSHFENQISDLRSR 714
Query: 1118 SRVFVPKGRVLVGCLDETGLLEYGQVYVRITMNKSELQCGEQIFFHKVDSTTSVLKGKVV 939
R+F+PKGR+LVGCLDETG+L+YGQVYVRITM K+ELQ G+Q FF KVD TT+V++GKVV
Sbjct: 715 CRIFIPKGRILVGCLDETGILKYGQVYVRITMTKAELQNGQQNFFQKVDETTAVVRGKVV 774
Query: 938 VTKNPCLHPGDVRVLEAVYDAELDEKDLVDCLIFPQKGERPHPNECSGGDLDGDQYFISW 759
VTKNPCLHPGDVRVLEAVY+ L+EK VDC+IFPQKGERPHPNECSGGDLDGD YFI W
Sbjct: 775 VTKNPCLHPGDVRVLEAVYEVTLEEKTWVDCIIFPQKGERPHPNECSGGDLDGDLYFICW 834
Query: 758 DENLIPARTVEPMDYTGRRPRIMDHDVTLEEIHRFFVDYMVGDTLGAISTAHLVHADREP 579
DE+LIP +TV PMDYTGRRPRIMDH+VTLEEI RFFVDYM+ DTLGAISTAHLVHADREP
Sbjct: 835 DESLIPCQTVTPMDYTGRRPRIMDHEVTLEEIQRFFVDYMISDTLGAISTAHLVHADREP 894
Query: 578 DKALSSKCLELASLQSMAVDFAKSGAPAEMPRSLKPREFPDFMERWEKPMYISQGALGKI 399
DKAL+SKCL+LA+L SMAVDFAK+GA AEMPR LKPREFPDFMERW+KPMYIS+G LGK+
Sbjct: 895 DKALNSKCLQLATLHSMAVDFAKTGAAAEMPRFLKPREFPDFMERWDKPMYISEGVLGKL 954
Query: 398 YRAIIESHRHMNTNFDCSSIISQDAYDQDLIVDGYEAFLETAESHKEQYLDRMSTLLNFY 219
YR +++S+ N++ + QDAYD DL+V+GYEAF ETA++HK YLD M++LLN+Y
Sbjct: 955 YRGVMKSYIRRNSDDLSADRAIQDAYDHDLLVEGYEAFTETAKTHKAMYLDSMNSLLNYY 1014
Query: 218 EAKSEVEILTGNMRNKSMYLQRDNRRFGEVKDRILGSAKSLQKEAKGWFESCCSGTDQQQ 39
A+ EVEILTGN+R KS+YLQRDNRR+ E+KDRIL SAKSL KE KGWF SCC D Q+
Sbjct: 1015 GAEKEVEILTGNLRQKSVYLQRDNRRYFELKDRILVSAKSLHKEVKGWFTSCCQEDDHQK 1074
Query: 38 LASAWYYVTYHP 3
LASAWY+VTYHP
Sbjct: 1075 LASAWYHVTYHP 1086
>ref|XP_002280099.1| PREDICTED: RNA-dependent RNA polymerase 2 [Vitis vinifera]
gi|297733815|emb|CBI15062.3| unnamed protein product
[Vitis vinifera]
Length = 1127
Score = 1453 bits (3762), Expect = 0.0
Identities = 719/1091 (65%), Positives = 875/1091 (80%)
Frame = -2
Query: 3278 IAMEERQTLTARVLNIPQNAIAKELFTFLESTLGKGTIFACEIFTEYNNWKSRGHGRIQF 3099
+A+ ER T+ +V NIP+ AIAKEL++FLES LG TI+A EI TE+ NWKSRG GR+QF
Sbjct: 1 MAVGERPTV--KVSNIPKTAIAKELWSFLESKLGPNTIYALEIATEHKNWKSRGFGRVQF 58
Query: 3098 DTPEAKNQALLLSQQKKLFFRGSHLSLFLAFDDIISRPLEPRNRVGDGMGVVLFAGMMIR 2919
+T +AK A LLS Q L FRGS LS+ FDDII RP+EPRN+V G VL G ++
Sbjct: 59 ETLQAKRAADLLSLQGDLVFRGSSLSISATFDDIIVRPVEPRNQVDSG---VLHVGFLVE 115
Query: 2918 GDCFGILEFWDGVKLWVVPERKKLELFLTHEGESYKLEVQFGDVLETYGCCLDGDKQKVD 2739
DC +LE W+GVK V+PER ++E ++ +GE YKLEV F DVLE+ CCL G K V+
Sbjct: 116 DDCMLVLESWEGVKTLVMPERNRVEFWVDKDGERYKLEVPFDDVLESSACCLGGGK--VN 173
Query: 2738 AILLKLKYAPKVYRKVSGSDVASKFRTDRYHICKEDFDFLWVRTTDFSSVKSIGYLSSLC 2559
A+LLKLKYAPK+++K +G ++ASKF DRYHI KED +FLW+RTTDFSS+KS+G +S C
Sbjct: 174 ALLLKLKYAPKIFQKFAGPNIASKFSADRYHISKEDAEFLWLRTTDFSSIKSLGQSTSFC 233
Query: 2558 WKIEQGSSNVDIYTCLPYYKKDVRELALIEGKKFRSASNMVPLVTNHSDFKLGYEVLFQL 2379
W+I++G +DI+ PYYK D+ EL L +G+ F S S +VPLV S KL YE+LFQL
Sbjct: 234 WEIKEGFPALDIFASFPYYK-DLTELTLEQGEGFCSDSGLVPLVKCESGPKLAYEILFQL 292
Query: 2378 NSLVHTHKMSLASVDTDLFQVLSRLDIDSAVLVLQKMHKLESTCFEPVSFITSHWHVINK 2199
NSLVH K+SLA+VDTDL ++LS L +D+A+++LQK+HK +ST ++P+SFI + H+IN
Sbjct: 293 NSLVHAQKISLAAVDTDLIEILSNLPVDTAIMILQKLHKRKSTRYDPISFIKAQAHIINM 352
Query: 2198 DGKNLTSASYNRLMNQNVMSCHRVLVTPSKIYCSGPELETSNYIVKNFASYASDFLRVTF 2019
+ KNL +S++RL N NVMSCHRVLVTPSKIYC GPELE+SNY+VK++A+YASDF+RV+F
Sbjct: 353 NIKNLPPSSHSRLTNNNVMSCHRVLVTPSKIYCLGPELESSNYVVKHYAAYASDFVRVSF 412
Query: 2018 VDEDWGRLPAGAISTSIKRGIFARPHRTDVYDRILSVLRDGIAIGDKRFEFLAFSASQLR 1839
V+EDW +LP+ A+S SI++ FA P RT++Y RILS+LR+GI IG KRF+FLAFSASQLR
Sbjct: 413 VEEDWSKLPSNALSMSIRKAFFADPFRTEIYHRILSILREGIVIGAKRFQFLAFSASQLR 472
Query: 1838 SNSVWMFASNEHVKAEDIREWMGCFNKIRSVSKCAARMGQLFSSSMQTMKVLPREVKVIP 1659
SNSVWMFASN+ V+ +DIREWMGCF KIRSVSKCAARMGQLFSSS+QT+ V ++V+VIP
Sbjct: 473 SNSVWMFASNDKVRVDDIREWMGCFKKIRSVSKCAARMGQLFSSSVQTLPVPVQDVEVIP 532
Query: 1658 DIEVISDGVGYCFSDGIGKISCAFAREISRKLGLSHIPSAFQIRYGGYKGVIVVDRSSYV 1479
DIEV SDG GYCFSDGIGKIS +FA+++++K GL PSAFQIRYGGYKGVI VDR+S+
Sbjct: 533 DIEVTSDGFGYCFSDGIGKISLSFAKQVAQKCGLHQTPSAFQIRYGGYKGVIAVDRNSFR 592
Query: 1478 KLALRGSMLKFESKNWMLNVTKWSESMPCYLNREIIILLSTLGIEDDVFXXXXXXXXXXX 1299
KL+LR SMLKFES+N MLNVTKWSES PCYLNREI+ LLSTLG+ED+ F
Sbjct: 593 KLSLRSSMLKFESQNRMLNVTKWSESTPCYLNREIVSLLSTLGVEDENFEALLNEQMHLL 652
Query: 1298 XXXLTNREAALKVLESMGGSDGKGVLARMLRQGYEPNREPYLSTMLQSQYENQLSDLRSR 1119
LTNR+AAL VLESMGG D K +LA+ML QGYEPN EPYLS MLQ+ E+QLSD+R+R
Sbjct: 653 DKMLTNRQAALDVLESMGGIDNKNILAKMLLQGYEPNVEPYLSMMLQAYRESQLSDIRTR 712
Query: 1118 SRVFVPKGRVLVGCLDETGLLEYGQVYVRITMNKSELQCGEQIFFHKVDSTTSVLKGKVV 939
R+FVPK RVL+GCLDETG+L YGQVYVR+TM K+E +C Q FF KVD TTSV+ GKV+
Sbjct: 713 CRIFVPKARVLIGCLDETGILNYGQVYVRVTMTKAEHKCRNQSFFQKVDDTTSVVIGKVI 772
Query: 938 VTKNPCLHPGDVRVLEAVYDAELDEKDLVDCLIFPQKGERPHPNECSGGDLDGDQYFISW 759
VTKNPCLHPGD+RVL+AVY+ EL+EK LVDC++FPQKGERPHPNECSGGDLDGDQ+FI W
Sbjct: 773 VTKNPCLHPGDIRVLDAVYEVELEEKGLVDCILFPQKGERPHPNECSGGDLDGDQFFICW 832
Query: 758 DENLIPARTVEPMDYTGRRPRIMDHDVTLEEIHRFFVDYMVGDTLGAISTAHLVHADREP 579
DE LIP++T PMDYT RRPRIMDHDVTLEEI +FFVDYM+ DTLG ISTAHLVHADREP
Sbjct: 833 DEGLIPSQTEAPMDYTSRRPRIMDHDVTLEEIQKFFVDYMINDTLGVISTAHLVHADREP 892
Query: 578 DKALSSKCLELASLQSMAVDFAKSGAPAEMPRSLKPREFPDFMERWEKPMYISQGALGKI 399
+KA S KCLELA+L SMAVDFAK+GAPAEMPR LKP+EFPDFMER +KPMYIS GALGK+
Sbjct: 893 EKARSKKCLELATLHSMAVDFAKTGAPAEMPRVLKPKEFPDFMERVDKPMYISNGALGKL 952
Query: 398 YRAIIESHRHMNTNFDCSSIISQDAYDQDLIVDGYEAFLETAESHKEQYLDRMSTLLNFY 219
YRA I S + ++F S I AYD DL VDG+E FLE A+ HKE Y ++M+TL+NFY
Sbjct: 953 YRATIASRVNEKSSFVWSGTIPGAAYDHDLEVDGFETFLEIAKLHKEMYAEKMATLMNFY 1012
Query: 218 EAKSEVEILTGNMRNKSMYLQRDNRRFGEVKDRILGSAKSLQKEAKGWFESCCSGTDQQQ 39
A+SE E+LTGN+RNK MYLQRDNRRF E+KDRIL S KSLQKEAK W C Q+
Sbjct: 1013 GAESEDEMLTGNLRNKLMYLQRDNRRFTEMKDRILISVKSLQKEAKEWLYGSCKPHQHQK 1072
Query: 38 LASAWYYVTYH 6
+ASAWY+VTYH
Sbjct: 1073 MASAWYHVTYH 1083
>ref|XP_007211312.1| hypothetical protein PRUPE_ppa000513mg [Prunus persica]
gi|462407047|gb|EMJ12511.1| hypothetical protein
PRUPE_ppa000513mg [Prunus persica]
Length = 1118
Score = 1434 bits (3713), Expect = 0.0
Identities = 698/1093 (63%), Positives = 871/1093 (79%), Gaps = 1/1093 (0%)
Frame = -2
Query: 3278 IAMEERQTLTARVLNIPQNAIAKELFTFLESTLGKGTIFACEIFTEYNNWKSRGHGRIQF 3099
+A+ ER T+ RV NIPQ AKEL +FL+S LG ++FA EI +++ NWKSRG GR+QF
Sbjct: 1 MALAERPTV--RVSNIPQTVTAKELLSFLQSKLGTDSVFAVEIISDHKNWKSRGFGRVQF 58
Query: 3098 DTPEAKNQALLLSQQKKLFFRGSHLSLFLAFDDIISRPLEPRNRVGDGMGVVLFAGMMIR 2919
T EAK++A LS Q L F+ L L +DDII RP++P+ R+ G VL AG M++
Sbjct: 59 TTLEAKSEAYSLSLQNGLVFKSESLRLSETYDDIIQRPVDPKRRLN---GTVLHAGFMVK 115
Query: 2918 GDCFGILEFWDGVKLWVVPERKKLELFLTHEGESYKLEVQFGDVLETYGCCLDGDKQKVD 2739
GDC +LE W+GV+ WV+PERK++E ++ E YKLE+ F +++E++GC L G+K V+
Sbjct: 116 GDCMSMLESWEGVRAWVMPERKRVEFWVWLRDECYKLEIAFENIMESFGCRLGGEK--VN 173
Query: 2738 AILLKLKYAPKVYRKVSGSDVASKFRTDRYHICKEDFDFLWVRTTDFSSVKSIGYLSSLC 2559
A+LLKLK+ P+++RK+SG +VA++F TDRYH+CK+DFDFLWVRTTDFS +KSIGY +S C
Sbjct: 174 ALLLKLKFGPRIFRKISGPNVAARFSTDRYHVCKDDFDFLWVRTTDFSDMKSIGYSTSFC 233
Query: 2558 WKIEQGSSNVDIYTCLPYYK-KDVRELALIEGKKFRSASNMVPLVTNHSDFKLGYEVLFQ 2382
W+IE+ S D++ C PYYK DV +L L G+K+ S S VPLV SD KL YE+LFQ
Sbjct: 234 WEIEEEFSVSDVFECFPYYKDNDVVDLILDNGEKYCSPSETVPLVKCRSDSKLPYEILFQ 293
Query: 2381 LNSLVHTHKMSLASVDTDLFQVLSRLDIDSAVLVLQKMHKLESTCFEPVSFITSHWHVIN 2202
LN+LVH+ K+SLA+ D+DL + LS L +D+ ++L+K+HK ++TC++P+SF+ HV+
Sbjct: 294 LNALVHSQKISLAATDSDLIEFLSGLSVDTTNVLLEKLHKRKTTCYDPLSFLKMQLHVLE 353
Query: 2201 KDGKNLTSASYNRLMNQNVMSCHRVLVTPSKIYCSGPELETSNYIVKNFASYASDFLRVT 2022
++ K+ S Y RLM NVMSCHRVL+TPSKI C GPELE SNY+VKNFA+YASDF+RVT
Sbjct: 354 RNHKSRPSP-YKRLMEHNVMSCHRVLITPSKICCLGPELEKSNYVVKNFAAYASDFMRVT 412
Query: 2021 FVDEDWGRLPAGAISTSIKRGIFARPHRTDVYDRILSVLRDGIAIGDKRFEFLAFSASQL 1842
FVDEDW +LPA AISTSI++GIFA+PHRT +Y R+LS+LRDGI IG+KRFEFLAFSASQL
Sbjct: 413 FVDEDWSKLPANAISTSIQQGIFAKPHRTGIYHRMLSILRDGIVIGEKRFEFLAFSASQL 472
Query: 1841 RSNSVWMFASNEHVKAEDIREWMGCFNKIRSVSKCAARMGQLFSSSMQTMKVLPREVKVI 1662
RS+SVWMF+SN++VKAEDIREWMGCF+KIRS+SKCAARMGQLFSSS QT+ V ++V++I
Sbjct: 473 RSSSVWMFSSNDNVKAEDIREWMGCFSKIRSISKCAARMGQLFSSSTQTLVVPAQDVEII 532
Query: 1661 PDIEVISDGVGYCFSDGIGKISCAFAREISRKLGLSHIPSAFQIRYGGYKGVIVVDRSSY 1482
PD+E SDGV YCFSDGIGKIS +FAR++++K GL PSAFQIRYGGYKGVI VD S+
Sbjct: 533 PDVETSSDGVTYCFSDGIGKISLSFARKVAQKCGLDQTPSAFQIRYGGYKGVIAVDCRSF 592
Query: 1481 VKLALRGSMLKFESKNWMLNVTKWSESMPCYLNREIIILLSTLGIEDDVFXXXXXXXXXX 1302
KL+LR SMLKFESKN MLNVTKWS++MPCYLNREII LLSTLG++D+ F
Sbjct: 593 RKLSLRSSMLKFESKNRMLNVTKWSDAMPCYLNREIISLLSTLGVKDETFEALQEEQLRL 652
Query: 1301 XXXXLTNREAALKVLESMGGSDGKGVLARMLRQGYEPNREPYLSTMLQSQYENQLSDLRS 1122
T R AAL V E + G+D K L +ML GYEPN EPYLS MLQ+ YEN LSDL+S
Sbjct: 653 LGKMRTERGAALNVFERLNGADSKNTLVKMLLHGYEPNAEPYLSMMLQAYYENHLSDLKS 712
Query: 1121 RSRVFVPKGRVLVGCLDETGLLEYGQVYVRITMNKSELQCGEQIFFHKVDSTTSVLKGKV 942
R R+FVPKGRVLVGCLDETG L+YGQVYVRITM K+E + G+Q FF KVD TT V+ GKV
Sbjct: 713 RCRIFVPKGRVLVGCLDETGNLDYGQVYVRITMTKAEQEMGDQSFFQKVDETTLVVTGKV 772
Query: 941 VVTKNPCLHPGDVRVLEAVYDAELDEKDLVDCLIFPQKGERPHPNECSGGDLDGDQYFIS 762
VVTKNPCLHPGDVRVL+AVYD L+EK++VDCLIFPQKGERPHPNECSGGDLDGD +FIS
Sbjct: 773 VVTKNPCLHPGDVRVLDAVYDVVLEEKNMVDCLIFPQKGERPHPNECSGGDLDGDLFFIS 832
Query: 761 WDENLIPARTVEPMDYTGRRPRIMDHDVTLEEIHRFFVDYMVGDTLGAISTAHLVHADRE 582
WD++L+P+ TV PMDY+ RRPRIMDH VTLEEI +FFVDYM+ D LGAISTAHLVHAD E
Sbjct: 833 WDKDLVPSHTVPPMDYSARRPRIMDHTVTLEEIQKFFVDYMINDNLGAISTAHLVHADHE 892
Query: 581 PDKALSSKCLELASLQSMAVDFAKSGAPAEMPRSLKPREFPDFMERWEKPMYISQGALGK 402
PDKAL+ KCL+LA L SMAVDFAK+GAPAEM R+LKP+EFPDFMER +KPMYIS GALGK
Sbjct: 893 PDKALNPKCLQLADLHSMAVDFAKTGAPAEMSRTLKPKEFPDFMERVDKPMYISNGALGK 952
Query: 401 IYRAIIESHRHMNTNFDCSSIISQDAYDQDLIVDGYEAFLETAESHKEQYLDRMSTLLNF 222
+YRA++ S TN S I++ AYDQDL VDG E+ LE A+ H++ Y+++M T++N+
Sbjct: 953 LYRAVVGSVLQEKTNLVWSEQIAEAAYDQDLEVDGLESVLEVAKGHRDMYIEKMRTMMNY 1012
Query: 221 YEAKSEVEILTGNMRNKSMYLQRDNRRFGEVKDRILGSAKSLQKEAKGWFESCCSGTDQQ 42
Y A +E EILTGN+RN++ YLQRDNRR+G++KDRI S K+LQKEAKG FES C ++ Q
Sbjct: 1013 YGAVTEDEILTGNLRNRAAYLQRDNRRYGDMKDRISLSLKNLQKEAKGLFESSCPVSEHQ 1072
Query: 41 QLASAWYYVTYHP 3
++ASAWY+VTYHP
Sbjct: 1073 RMASAWYHVTYHP 1085
>gb|AHL27587.1| RNA-dependent RNA polymerase 4 [Salvia miltiorrhiza]
Length = 972
Score = 1426 bits (3692), Expect = 0.0
Identities = 693/960 (72%), Positives = 815/960 (84%)
Frame = -2
Query: 3269 EERQTLTARVLNIPQNAIAKELFTFLESTLGKGTIFACEIFTEYNNWKSRGHGRIQFDTP 3090
E R TLT +V NIP AIAK+L FLES LGKGT+FA EIFTE NWKSRGHGR+QF++P
Sbjct: 8 EARPTLTVKVTNIPPIAIAKDLQAFLESVLGKGTVFAVEIFTERENWKSRGHGRVQFESP 67
Query: 3089 EAKNQALLLSQQKKLFFRGSHLSLFLAFDDIISRPLEPRNRVGDGMGVVLFAGMMIRGDC 2910
EAK +AL LS +K F+G +LS+ + ++II RP++P RVGDG G+VLFAG+MIR DC
Sbjct: 68 EAKIEALSLSHHRKFLFKGFYLSVTHSLEEIIIRPVDPIYRVGDGGGLVLFAGIMIRADC 127
Query: 2909 FGILEFWDGVKLWVVPERKKLELFLTHEGESYKLEVQFGDVLETYGCCLDGDKQKVDAIL 2730
G LE W+G+KLW +PERKK+ F+ H GESYKLEVQFGDVLE+ GCCL G KVDAIL
Sbjct: 128 MGTLESWNGMKLWFMPERKKIHFFVDHGGESYKLEVQFGDVLESRGCCLGGGDMKVDAIL 187
Query: 2729 LKLKYAPKVYRKVSGSDVASKFRTDRYHICKEDFDFLWVRTTDFSSVKSIGYLSSLCWKI 2550
LKL++APK+++KVSG +AS+F TDRYHICKED+DF+WVRTTDFSS+KSIGYLSSLCW+I
Sbjct: 188 LKLRHAPKIFKKVSGPKIASRFTTDRYHICKEDYDFIWVRTTDFSSMKSIGYLSSLCWEI 247
Query: 2549 EQGSSNVDIYTCLPYYKKDVRELALIEGKKFRSASNMVPLVTNHSDFKLGYEVLFQLNSL 2370
E+G SN+D+YT LPYY K+V ELA E +F AS++VP+V N S F++ YEVLFQLNSL
Sbjct: 248 EEGFSNLDLYTSLPYYTKEVTELAF-EEVQFNHASDLVPIVKNDSVFQVAYEVLFQLNSL 306
Query: 2369 VHTHKMSLASVDTDLFQVLSRLDIDSAVLVLQKMHKLESTCFEPVSFITSHWHVINKDGK 2190
VH K+SLA+V+TDLFQ+LSRLD+D+A+L+L++MHKL STC+EP SF+ + + + K
Sbjct: 307 VHCQKLSLAAVNTDLFQILSRLDMDTALLILKEMHKLHSTCYEPKSFVENQPSITTHNRK 366
Query: 2189 NLTSASYNRLMNQNVMSCHRVLVTPSKIYCSGPELETSNYIVKNFASYASDFLRVTFVDE 2010
NL SA RL+ N+MSCHRVLVTP+KI+C GPELE+SNYIVKNFA YASDF+RVTFVDE
Sbjct: 367 NLPSAE--RLIEHNIMSCHRVLVTPTKIFCLGPELESSNYIVKNFADYASDFMRVTFVDE 424
Query: 2009 DWGRLPAGAISTSIKRGIFARPHRTDVYDRILSVLRDGIAIGDKRFEFLAFSASQLRSNS 1830
DWGRL GA+STSI +GIFA+P+RTD+Y RILSVL+DG+ IGDK+FEFLAFSASQLRSNS
Sbjct: 425 DWGRLSPGAVSTSIMKGIFAKPYRTDIYRRILSVLQDGLVIGDKKFEFLAFSASQLRSNS 484
Query: 1829 VWMFASNEHVKAEDIREWMGCFNKIRSVSKCAARMGQLFSSSMQTMKVLPREVKVIPDIE 1650
VWMFASN+HVKAEDIREWMGCFNKIRS+SKCAARMGQLFSSSMQT+KV+PR+V++IP+IE
Sbjct: 485 VWMFASNDHVKAEDIREWMGCFNKIRSISKCAARMGQLFSSSMQTLKVIPRDVELIPEIE 544
Query: 1649 VISDGVGYCFSDGIGKISCAFAREISRKLGLSHIPSAFQIRYGGYKGVIVVDRSSYVKLA 1470
V+SDGV +CFSDGIGKIS FARE+ RKLGLSHIPSAFQIRYGGYKGVI V+R S+ KL+
Sbjct: 545 VVSDGVKHCFSDGIGKISIPFAREVVRKLGLSHIPSAFQIRYGGYKGVIAVNRHSFRKLS 604
Query: 1469 LRGSMLKFESKNWMLNVTKWSESMPCYLNREIIILLSTLGIEDDVFXXXXXXXXXXXXXX 1290
LR SMLKFES N MLN+TKWSES PCYLNREII LLSTLG++D VF
Sbjct: 605 LRSSMLKFESTNCMLNITKWSESQPCYLNREIITLLSTLGVKDSVFLAMQDEQLQLLGTM 664
Query: 1289 LTNREAALKVLESMGGSDGKGVLARMLRQGYEPNREPYLSTMLQSQYENQLSDLRSRSRV 1110
LT+ +AAL VLES GG D K +ARML QGY+P+ EPYL TMLQS ENQ+SD+RSR R+
Sbjct: 665 LTDAKAALNVLESTGGGDMKSSMARMLLQGYDPSNEPYLLTMLQSYLENQISDIRSRCRI 724
Query: 1109 FVPKGRVLVGCLDETGLLEYGQVYVRITMNKSELQCGEQIFFHKVDSTTSVLKGKVVVTK 930
FVPKGRVLVGCLDE+G LEYGQV+VR+TMN +EL+ G+Q FF +VD TTS+L+GKVVVTK
Sbjct: 725 FVPKGRVLVGCLDESGTLEYGQVFVRLTMNTAELEGGDQPFFQRVDETTSILRGKVVVTK 784
Query: 929 NPCLHPGDVRVLEAVYDAELDEKDLVDCLIFPQKGERPHPNECSGGDLDGDQYFISWDEN 750
NPCLHPGDVRVLEAVYD +L E ++VDCL+FPQKGERPHPNECSGGDLDGD YFISWD +
Sbjct: 785 NPCLHPGDVRVLEAVYDIKLQEDNMVDCLVFPQKGERPHPNECSGGDLDGDLYFISWDVD 844
Query: 749 LIPARTVEPMDYTGRRPRIMDHDVTLEEIHRFFVDYMVGDTLGAISTAHLVHADREPDKA 570
L+P RTV PMDYTGRRPRIM+H+VTLEEI FF DYM+ DTLGAIS AHLVHADREP+KA
Sbjct: 845 LVPPRTVTPMDYTGRRPRIMNHEVTLEEIQTFFADYMISDTLGAISNAHLVHADREPEKA 904
Query: 569 LSSKCLELASLQSMAVDFAKSGAPAEMPRSLKPREFPDFMERWEKPMYISQGALGKIYRA 390
LS KCLELA+L SMAVDFAK+GAPAEMPR LKPREFPDFMERWEKP Y+S GALGK+YRA
Sbjct: 905 LSPKCLELANLHSMAVDFAKTGAPAEMPRYLKPREFPDFMERWEKPTYVSHGALGKLYRA 964
>ref|XP_012080101.1| PREDICTED: RNA-dependent RNA polymerase 2 isoform X1 [Jatropha
curcas] gi|643720862|gb|KDP31126.1| hypothetical protein
JCGZ_11502 [Jatropha curcas]
Length = 1122
Score = 1414 bits (3661), Expect = 0.0
Identities = 688/1084 (63%), Positives = 861/1084 (79%), Gaps = 1/1084 (0%)
Frame = -2
Query: 3251 TARVLNIPQNAIAKELFTFLESTLGKGTIFACEIFTEYNNWKSRGHGRIQFDTPEAKNQA 3072
TAR+ +IPQ IA++L +LES LG+ ++FA EI TE NWKSRG GR+QF T E +++A
Sbjct: 12 TARLTSIPQTVIAEDLLQYLESQLGQDSVFAIEICTERKNWKSRGFGRVQFSTLEFRHKA 71
Query: 3071 LLLSQQKKLFFRGSHLSLFLAFDDIISRPLEPRNRVGDGMGVVLFAGMMIRGDCFGILEF 2892
L Q KL F+ +L + +DDII RP++P++R +G VL+AG M + C +LE
Sbjct: 72 QSLCLQNKLVFKSHYLLVSDTYDDIIPRPIKPQHRQENG---VLYAGFMKQERCLCVLES 128
Query: 2891 WDGVKLWVVPERKKLELFLTHEGESYKLEVQFGDVLETYGCCLDGDKQKVDAILLKLKYA 2712
W+ V+ W++PER+++E +L + + YK+E++F DV + G CL GDK V+A+LLKL+Y
Sbjct: 129 WEDVRGWLMPERRRVEFWLWVDKDCYKVEIRFEDVKDAVGFCLGGDK--VNAVLLKLRYG 186
Query: 2711 PKVYRKVSGSDVASKFRTDRYHICKEDFDFLWVRTTDFSSVKSIGYLSSLCWKIEQGSSN 2532
P++Y+++SG DVASKF DRYHICKEDFDF+WVRT DFSSVKSIG +S CW++E+G
Sbjct: 187 PRIYKRISGPDVASKFSADRYHICKEDFDFIWVRTADFSSVKSIGKSTSFCWEVEEGLDA 246
Query: 2531 VDIYTCLPYYKKDVRELALIEGKKFRS-ASNMVPLVTNHSDFKLGYEVLFQLNSLVHTHK 2355
DI+T PYY +D R++ L +G+KF S MVPL SD KL YE+ FQLNSLVHTHK
Sbjct: 247 SDIFTSFPYYVEDRRDIVLEDGEKFHPITSEMVPLAGYESDSKLAYEIFFQLNSLVHTHK 306
Query: 2354 MSLASVDTDLFQVLSRLDIDSAVLVLQKMHKLESTCFEPVSFITSHWHVINKDGKNLTSA 2175
+SLA+VDTDLF++L L ID+A+ +LQK+HKL TC++PVSF+ H ++ K S+
Sbjct: 307 ISLAAVDTDLFKILGSLTIDTAMAILQKLHKLTFTCYDPVSFVKKQLHAPRRNLKK-PSS 365
Query: 2174 SYNRLMNQNVMSCHRVLVTPSKIYCSGPELETSNYIVKNFASYASDFLRVTFVDEDWGRL 1995
S + N+M CHR L+TPSKIYC GPELE+SNY+VKNFASYASDF+RVTFV+EDW +L
Sbjct: 366 SQKSSTDHNIMICHRALITPSKIYCLGPELESSNYVVKNFASYASDFMRVTFVEEDWSKL 425
Query: 1994 PAGAISTSIKRGIFARPHRTDVYDRILSVLRDGIAIGDKRFEFLAFSASQLRSNSVWMFA 1815
P AISTSI+ GIFA+P RT +Y+RILSVLRDGI IG KRFEFLAFSASQLRSNSVWMFA
Sbjct: 426 PVNAISTSIQHGIFAKPFRTKIYERILSVLRDGIVIGAKRFEFLAFSASQLRSNSVWMFA 485
Query: 1814 SNEHVKAEDIREWMGCFNKIRSVSKCAARMGQLFSSSMQTMKVLPREVKVIPDIEVISDG 1635
SN++VKAEDIR+WMGCFNKIRS+SKCAARMGQLFS+S QT V +V++IPDIEV SDG
Sbjct: 486 SNDNVKAEDIRQWMGCFNKIRSISKCAARMGQLFSASKQTFVVPAEDVEIIPDIEVTSDG 545
Query: 1634 VGYCFSDGIGKISCAFAREISRKLGLSHIPSAFQIRYGGYKGVIVVDRSSYVKLALRGSM 1455
+GYCFSDGIGKIS +FA+++++K GL+H PSAFQIRYGG+KGVI VDR+S KL+LR SM
Sbjct: 546 IGYCFSDGIGKISLSFAQQVAQKCGLNHTPSAFQIRYGGFKGVIAVDRNSLRKLSLRSSM 605
Query: 1454 LKFESKNWMLNVTKWSESMPCYLNREIIILLSTLGIEDDVFXXXXXXXXXXXXXXLTNRE 1275
LKFES+N MLNVTKWS+SMPCYLNREI+ LLSTLG++D++F L +RE
Sbjct: 606 LKFESENRMLNVTKWSDSMPCYLNREIVTLLSTLGVKDEIFQGLQQQQLHLLGRMLNDRE 665
Query: 1274 AALKVLESMGGSDGKGVLARMLRQGYEPNREPYLSTMLQSQYENQLSDLRSRSRVFVPKG 1095
AAL VLE++ D + ++ +ML QGY+PN EPYLS MLQ+ +EN L +LRSR RVFVPKG
Sbjct: 666 AALDVLENLAWVDSRNIMVKMLLQGYKPNVEPYLSMMLQAYHENLLVELRSRCRVFVPKG 725
Query: 1094 RVLVGCLDETGLLEYGQVYVRITMNKSELQCGEQIFFHKVDSTTSVLKGKVVVTKNPCLH 915
R+L+GCLDE G+L+YGQ+YVR+T++KSELQ +Q FF KVD TTS++ GKVVVTKNPCLH
Sbjct: 726 RILIGCLDEEGILDYGQIYVRVTLSKSELQNADQSFFRKVDETTSIVTGKVVVTKNPCLH 785
Query: 914 PGDVRVLEAVYDAELDEKDLVDCLIFPQKGERPHPNECSGGDLDGDQYFISWDENLIPAR 735
PGDVRVLEAVY+ L+EK LVDC++FPQKGERPHPNECSGGDLDGD +FISWDE+LIP++
Sbjct: 786 PGDVRVLEAVYEVGLEEKGLVDCILFPQKGERPHPNECSGGDLDGDLFFISWDEDLIPSQ 845
Query: 734 TVEPMDYTGRRPRIMDHDVTLEEIHRFFVDYMVGDTLGAISTAHLVHADREPDKALSSKC 555
T PMDY GRRPRIMDHDV LEEIH+FFVDYM+ DTLGAISTAHLVHADREPDKA S KC
Sbjct: 846 TESPMDYLGRRPRIMDHDVKLEEIHKFFVDYMINDTLGAISTAHLVHADREPDKARSRKC 905
Query: 554 LELASLQSMAVDFAKSGAPAEMPRSLKPREFPDFMERWEKPMYISQGALGKIYRAIIESH 375
L+LA L SMAVDFAK+GAPAEMPR+LKP+EFPDFMER++K YIS LGK+YR ++S
Sbjct: 906 LKLAELHSMAVDFAKTGAPAEMPRALKPKEFPDFMERFDKSTYISDAVLGKLYRGTLDST 965
Query: 374 RHMNTNFDCSSIISQDAYDQDLIVDGYEAFLETAESHKEQYLDRMSTLLNFYEAKSEVEI 195
T F S I++ YD +L V+G+ F++ A +HK Y++++S L+N+YEAK+E E+
Sbjct: 966 LQGRTKFIWSEKIAEATYDCNLEVEGFMEFIDIAANHKYMYMEKLSGLMNYYEAKNEDEM 1025
Query: 194 LTGNMRNKSMYLQRDNRRFGEVKDRILGSAKSLQKEAKGWFESCCSGTDQQQLASAWYYV 15
LTGN+RNK+MYLQRDNRR+G+ KDRIL S KSLQKEAK WFES C + QQ LASAWY+V
Sbjct: 1026 LTGNLRNKAMYLQRDNRRYGDTKDRILLSMKSLQKEAKEWFESSCRPSTQQCLASAWYHV 1085
Query: 14 TYHP 3
T HP
Sbjct: 1086 TCHP 1089
>ref|XP_007036161.1| RNA-dependent RNA polymerase 2 isoform 1 [Theobroma cacao]
gi|590663258|ref|XP_007036162.1| RNA-dependent RNA
polymerase 2 isoform 1 [Theobroma cacao]
gi|508773406|gb|EOY20662.1| RNA-dependent RNA polymerase
2 isoform 1 [Theobroma cacao] gi|508773407|gb|EOY20663.1|
RNA-dependent RNA polymerase 2 isoform 1 [Theobroma
cacao]
Length = 1149
Score = 1406 bits (3639), Expect = 0.0
Identities = 693/1092 (63%), Positives = 860/1092 (78%)
Frame = -2
Query: 3278 IAMEERQTLTARVLNIPQNAIAKELFTFLESTLGKGTIFACEIFTEYNNWKSRGHGRIQF 3099
I ER+ T RV N+PQ AIAK+L FLE LG T+FA EI T+ NNWKSRG GR+QF
Sbjct: 6 IGAMERERPTLRVTNVPQTAIAKDLLEFLEYKLGTDTVFAIEISTDRNNWKSRGFGRVQF 65
Query: 3098 DTPEAKNQALLLSQQKKLFFRGSHLSLFLAFDDIISRPLEPRNRVGDGMGVVLFAGMMIR 2919
T EAK++A LLS + L F+ L L +DDII RP+ +R+ G VL G M++
Sbjct: 66 ATLEAKSKAHLLSLRNDLVFKSHSLKLSETYDDIIPRPIRADHRLDGG---VLHVGFMVQ 122
Query: 2918 GDCFGILEFWDGVKLWVVPERKKLELFLTHEGESYKLEVQFGDVLETYGCCLDGDKQKVD 2739
D +LE W+ V+ W++PER++LE +L + GE YKLEV F DVLET GCC +G +
Sbjct: 123 DDYLRVLERWEDVRGWLMPERRRLEFWLWNNGECYKLEVLFDDVLETVGCCFNGSS--CN 180
Query: 2738 AILLKLKYAPKVYRKVSGSDVASKFRTDRYHICKEDFDFLWVRTTDFSSVKSIGYLSSLC 2559
A+LL++KYAP++Y+KVSG ++ASK R DRYHICKE+FDFLWVRTTDFS K++G ++
Sbjct: 181 ALLLRVKYAPRIYQKVSGPNIASKLRPDRYHICKENFDFLWVRTTDFSRTKAVGQSTAFY 240
Query: 2558 WKIEQGSSNVDIYTCLPYYKKDVRELALIEGKKFRSASNMVPLVTNHSDFKLGYEVLFQL 2379
W+I +D+++C Y++D++ L L G +F SA +VPLV SD KL YE+LFQL
Sbjct: 241 WEINAELLTLDLFSCFSCYREDMKGLTLKGGGEFSSAPEIVPLVKGPSDSKLAYEILFQL 300
Query: 2378 NSLVHTHKMSLASVDTDLFQVLSRLDIDSAVLVLQKMHKLESTCFEPVSFITSHWHVINK 2199
NSLVHT K+S+ASVDTDL +L L +++AV++LQK HKL STC+ PVSF+ + V +
Sbjct: 301 NSLVHTQKISIASVDTDLIDILRVLAVETAVMILQKFHKLLSTCYNPVSFVKENLPVSER 360
Query: 2198 DGKNLTSASYNRLMNQNVMSCHRVLVTPSKIYCSGPELETSNYIVKNFASYASDFLRVTF 2019
+ ++ +S+ RL++ NVMSCHR LVTPSKIYC GPELETSNY+VKNFA YASDF+RV+F
Sbjct: 361 NFQSRPLSSFKRLIDHNVMSCHRALVTPSKIYCLGPELETSNYVVKNFAEYASDFMRVSF 420
Query: 2018 VDEDWGRLPAGAISTSIKRGIFARPHRTDVYDRILSVLRDGIAIGDKRFEFLAFSASQLR 1839
V+EDWG+L A AISTS++ GIF++P RT +Y RILSVL+ GI IGDKRFEFLAFSASQLR
Sbjct: 421 VEEDWGKLSANAISTSVQLGIFSKPFRTKIYHRILSVLQHGIVIGDKRFEFLAFSASQLR 480
Query: 1838 SNSVWMFASNEHVKAEDIREWMGCFNKIRSVSKCAARMGQLFSSSMQTMKVLPREVKVIP 1659
SNSVWMFASN+ V AED+REWMGCF KIRSVSKCAARMGQLFSSS+ T+ V ++VK+IP
Sbjct: 481 SNSVWMFASNDKVTAEDVREWMGCFKKIRSVSKCAARMGQLFSSSLPTLVVPVQDVKIIP 540
Query: 1658 DIEVISDGVGYCFSDGIGKISCAFAREISRKLGLSHIPSAFQIRYGGYKGVIVVDRSSYV 1479
DIEV SDG+ YCFSDGIGKIS FARE+++K GL+ PSAFQIRYGGYKGV+ VDR+S+
Sbjct: 541 DIEVTSDGINYCFSDGIGKISLPFAREVAQKCGLNDTPSAFQIRYGGYKGVVAVDRNSFR 600
Query: 1478 KLALRGSMLKFESKNWMLNVTKWSESMPCYLNREIIILLSTLGIEDDVFXXXXXXXXXXX 1299
K++LRGSM KFESK MLNVTKWSESMPC+LNREI+ LLSTLGI+D+ F
Sbjct: 601 KMSLRGSMHKFESKIRMLNVTKWSESMPCFLNREIVTLLSTLGIKDEAFETLQQEQLHLL 660
Query: 1298 XXXLTNREAALKVLESMGGSDGKGVLARMLRQGYEPNREPYLSTMLQSQYENQLSDLRSR 1119
LTNREAAL VL+S+ G+D + +L +ML QGYEPN EPYLS ML + + + LSDL+ R
Sbjct: 661 GQMLTNREAALDVLQSLCGADSQNILVKMLLQGYEPNVEPYLSMMLLANHVSLLSDLKCR 720
Query: 1118 SRVFVPKGRVLVGCLDETGLLEYGQVYVRITMNKSELQCGEQIFFHKVDSTTSVLKGKVV 939
R++VPKG+VLVGCLDET L YGQVYVR+++ K+EL+ +Q FFHKVD T+++ GKVV
Sbjct: 721 CRIYVPKGQVLVGCLDETATLNYGQVYVRLSIKKAELEHADQNFFHKVDEKTAIVIGKVV 780
Query: 938 VTKNPCLHPGDVRVLEAVYDAELDEKDLVDCLIFPQKGERPHPNECSGGDLDGDQYFISW 759
VTKNPCLHPGDVRVLEAVY+AEL++K LVDCL+FPQKGERPHPNECSGGDLDGDQ+FISW
Sbjct: 781 VTKNPCLHPGDVRVLEAVYEAELEDKGLVDCLVFPQKGERPHPNECSGGDLDGDQFFISW 840
Query: 758 DENLIPARTVEPMDYTGRRPRIMDHDVTLEEIHRFFVDYMVGDTLGAISTAHLVHADREP 579
D++LIP +T PMDYTG RPRIMDH+VTLEEI +FFVDYM+ DTLGAISTAHLVHADREP
Sbjct: 841 DKDLIPCQTDAPMDYTGSRPRIMDHEVTLEEIQKFFVDYMINDTLGAISTAHLVHADREP 900
Query: 578 DKALSSKCLELASLQSMAVDFAKSGAPAEMPRSLKPREFPDFMERWEKPMYISQGALGKI 399
DKA S KCLELA+L SMAVDFAK+GAPAEMPRSLKPREFPDFM+R +KPMY S G LGK+
Sbjct: 901 DKARSEKCLELATLHSMAVDFAKTGAPAEMPRSLKPREFPDFMQRVDKPMYASLGVLGKL 960
Query: 398 YRAIIESHRHMNTNFDCSSIISQDAYDQDLIVDGYEAFLETAESHKEQYLDRMSTLLNFY 219
YRA I S + F S +++ YD DL V+G+EAFL TA++HK+ Y ++MS L+N+Y
Sbjct: 961 YRATINSTVQERSKFVWSKKMAEALYDHDLEVNGFEAFLSTAQTHKDMYEEKMSFLMNYY 1020
Query: 218 EAKSEVEILTGNMRNKSMYLQRDNRRFGEVKDRILGSAKSLQKEAKGWFESCCSGTDQQQ 39
E +SE EILTGNMRNK+ +LQRDNRR+G++KDRIL S K+LQ+EA+ FE+ C + Q+
Sbjct: 1021 EVESEDEILTGNMRNKATFLQRDNRRYGDMKDRILLSMKNLQREARERFENSCKVGEHQR 1080
Query: 38 LASAWYYVTYHP 3
LASAWY+VTYHP
Sbjct: 1081 LASAWYHVTYHP 1092
>ref|XP_008239735.1| PREDICTED: LOW QUALITY PROTEIN: RNA-dependent RNA polymerase 2
[Prunus mume]
Length = 1100
Score = 1405 bits (3638), Expect = 0.0
Identities = 688/1093 (62%), Positives = 859/1093 (78%), Gaps = 1/1093 (0%)
Frame = -2
Query: 3278 IAMEERQTLTARVLNIPQNAIAKELFTFLESTLGKGTIFACEIFTEYNNWKSRGHGRIQF 3099
+A+ ER T+ RV NIPQ AKEL +FLES LG ++FA EI +++ NWKSRG GR+QF
Sbjct: 1 MAVAERPTV--RVSNIPQTVTAKELLSFLESKLGPDSVFAVEIISDHKNWKSRGFGRVQF 58
Query: 3098 DTPEAKNQALLLSQQKKLFFRGSHLSLFLAFDDIISRPLEPRNRVGDGMGVVLFAGMMIR 2919
EAK++ L +DDII RP++P+ R+ G VL AG M++
Sbjct: 59 TNHEAKSE------------------LSETYDDIIQRPVDPKRRLN---GTVLHAGFMVK 97
Query: 2918 GDCFGILEFWDGVKLWVVPERKKLELFLTHEGESYKLEVQFGDVLETYGCCLDGDKQKVD 2739
GDC +LE W+GV+ WV+PERK++E ++ E YKLE+ F +++E++GC L G+K V+
Sbjct: 98 GDCMSMLESWEGVRAWVMPERKRVEFWVWLRDECYKLEIAFENIMESFGCRLGGEK--VN 155
Query: 2738 AILLKLKYAPKVYRKVSGSDVASKFRTDRYHICKEDFDFLWVRTTDFSSVKSIGYLSSLC 2559
A+LLKLK+ P+++RK+SG +VA++F TDRYH+CK+DFDFLWVRTTDFS +KSIGY +S C
Sbjct: 156 ALLLKLKFGPRIFRKISGPNVAARFSTDRYHVCKDDFDFLWVRTTDFSDMKSIGYSTSFC 215
Query: 2558 WKIEQGSSNVDIYTCLPYYK-KDVRELALIEGKKFRSASNMVPLVTNHSDFKLGYEVLFQ 2382
W+IE+ S D++ C PYYK DV +L L G+K+ S S VPLV SD KL YE+LFQ
Sbjct: 216 WEIEEEFSLSDVFECFPYYKDNDVVDLILDNGEKYCSPSETVPLVKCGSDSKLPYEILFQ 275
Query: 2381 LNSLVHTHKMSLASVDTDLFQVLSRLDIDSAVLVLQKMHKLESTCFEPVSFITSHWHVIN 2202
LN+LVH+ K+SLA+ D+DL + LS L +D+ ++L+K+HK ++TC++P SF+ HV+
Sbjct: 276 LNALVHSQKISLAATDSDLIEFLSGLSVDTTNVLLEKLHKRKTTCYDPQSFLKMQLHVLE 335
Query: 2201 KDGKNLTSASYNRLMNQNVMSCHRVLVTPSKIYCSGPELETSNYIVKNFASYASDFLRVT 2022
++ K+ S Y RL NVMSCHRVL+TPSKI C GPELE SNY+VKNFA+YASDF+RVT
Sbjct: 336 RNHKSRPSP-YKRLTEHNVMSCHRVLITPSKICCLGPELEKSNYVVKNFAAYASDFMRVT 394
Query: 2021 FVDEDWGRLPAGAISTSIKRGIFARPHRTDVYDRILSVLRDGIAIGDKRFEFLAFSASQL 1842
FVDEDW +LPA AISTSI++GIFA+PHRT +Y R+LS+LRDGI IG+K FEFLAFSASQL
Sbjct: 395 FVDEDWSKLPANAISTSIQQGIFAKPHRTGIYHRMLSILRDGIVIGEKNFEFLAFSASQL 454
Query: 1841 RSNSVWMFASNEHVKAEDIREWMGCFNKIRSVSKCAARMGQLFSSSMQTMKVLPREVKVI 1662
RS+SVWMF+SN++VKAEDIREWMGCF+KIRS+SKCAARMGQLFSSS QT+ V ++V++I
Sbjct: 455 RSSSVWMFSSNDNVKAEDIREWMGCFSKIRSISKCAARMGQLFSSSTQTLVVPAQDVEII 514
Query: 1661 PDIEVISDGVGYCFSDGIGKISCAFAREISRKLGLSHIPSAFQIRYGGYKGVIVVDRSSY 1482
PD+E SDGV YCFSDGIGKIS +FAR++++K GL PSAFQIRYGGYKGVI VD S+
Sbjct: 515 PDVETSSDGVTYCFSDGIGKISLSFARKVAQKCGLDQTPSAFQIRYGGYKGVIAVDCRSF 574
Query: 1481 VKLALRGSMLKFESKNWMLNVTKWSESMPCYLNREIIILLSTLGIEDDVFXXXXXXXXXX 1302
KL+LR SMLKFESKN MLNVTKWS++MPCYLNREII L+STLG++D+ F
Sbjct: 575 RKLSLRSSMLKFESKNTMLNVTKWSDAMPCYLNREIISLMSTLGVKDETFEALQEEQLRL 634
Query: 1301 XXXXLTNREAALKVLESMGGSDGKGVLARMLRQGYEPNREPYLSTMLQSQYENQLSDLRS 1122
T R AAL VLE + G+D K L +ML GYEPN EPYLS MLQ+ YEN LSDL+S
Sbjct: 635 LGKMRTERGAALNVLERLNGADSKNTLVKMLLHGYEPNVEPYLSMMLQAYYENHLSDLKS 694
Query: 1121 RSRVFVPKGRVLVGCLDETGLLEYGQVYVRITMNKSELQCGEQIFFHKVDSTTSVLKGKV 942
R R+FVPKGRVLVGCLDETG L+YGQVYVRITM K+E + G+Q FF KVD TT ++ GKV
Sbjct: 695 RCRIFVPKGRVLVGCLDETGNLDYGQVYVRITMTKAEQEMGDQSFFQKVDETTCIVTGKV 754
Query: 941 VVTKNPCLHPGDVRVLEAVYDAELDEKDLVDCLIFPQKGERPHPNECSGGDLDGDQYFIS 762
VVTKNPCLHPGDVRVL+AVYD L+EK++VDCLIFPQKGERPHPNECSGGDLDGD +FIS
Sbjct: 755 VVTKNPCLHPGDVRVLDAVYDVVLEEKNMVDCLIFPQKGERPHPNECSGGDLDGDLFFIS 814
Query: 761 WDENLIPARTVEPMDYTGRRPRIMDHDVTLEEIHRFFVDYMVGDTLGAISTAHLVHADRE 582
WD++L+P+ TV PMDY+ RRPRIMDH VTLEEI +FFVDYM+ D LGAISTAHLVHAD E
Sbjct: 815 WDKDLVPSHTVPPMDYSARRPRIMDHTVTLEEIQKFFVDYMINDNLGAISTAHLVHADHE 874
Query: 581 PDKALSSKCLELASLQSMAVDFAKSGAPAEMPRSLKPREFPDFMERWEKPMYISQGALGK 402
PDKAL+ KCL+LA L SMAVDFAK+GAPAEM R+LKP+EFPDFMER +KPMYIS GALGK
Sbjct: 875 PDKALNPKCLQLADLHSMAVDFAKTGAPAEMSRTLKPKEFPDFMERVDKPMYISNGALGK 934
Query: 401 IYRAIIESHRHMNTNFDCSSIISQDAYDQDLIVDGYEAFLETAESHKEQYLDRMSTLLNF 222
+YRA++ S TN S I++ AYDQDL VDG E+ LE A+ H++ Y+++M T++N
Sbjct: 935 LYRAVVGSVLQEKTNLVWSEQIAEAAYDQDLEVDGLESVLEVAKGHRDTYIEKMRTIMNN 994
Query: 221 YEAKSEVEILTGNMRNKSMYLQRDNRRFGEVKDRILGSAKSLQKEAKGWFESCCSGTDQQ 42
Y A +E EILTGN+RN++ YLQRDNRR+G++KDRI S K+LQKEAKG FES C ++ Q
Sbjct: 995 YGAVTEDEILTGNLRNRAAYLQRDNRRYGDMKDRISLSLKNLQKEAKGMFESSCPVSEHQ 1054
Query: 41 QLASAWYYVTYHP 3
++ASAWY+VTYHP
Sbjct: 1055 RMASAWYHVTYHP 1067
>ref|XP_010107450.1| RNA-dependent RNA polymerase 2 [Morus notabilis]
gi|587928851|gb|EXC16034.1| RNA-dependent RNA polymerase
2 [Morus notabilis]
Length = 1115
Score = 1399 bits (3620), Expect = 0.0
Identities = 682/1091 (62%), Positives = 853/1091 (78%)
Frame = -2
Query: 3275 AMEERQTLTARVLNIPQNAIAKELFTFLESTLGKGTIFACEIFTEYNNWKSRGHGRIQFD 3096
AM ER T+ RV NIPQ AIA +L TFLES LG ++FA EI TE NWKSRG GR+QF
Sbjct: 3 AMVERPTV--RVTNIPQTAIATDLQTFLESKLGPNSVFAVEISTERKNWKSRGFGRVQFT 60
Query: 3095 TPEAKNQALLLSQQKKLFFRGSHLSLFLAFDDIISRPLEPRNRVGDGMGVVLFAGMMIRG 2916
+ AK A LS FR +L +F DDI++ P++P+ R+ DG VL AG MIR
Sbjct: 61 SLAAKLVAQALSLSNNFVFRSRNLGIFDTHDDIVALPVDPKLRLEDG---VLHAGFMIRD 117
Query: 2915 DCFGILEFWDGVKLWVVPERKKLELFLTHEGESYKLEVQFGDVLETYGCCLDGDKQKVDA 2736
D +L+ W+GV+ W +PER ++E ++ + + YKLEV F DVLET G CLD K + A
Sbjct: 118 DRMAVLQSWEGVRAWAMPERNRVEFWVWSDEDCYKLEVAFEDVLETVGYCLDDGK--LYA 175
Query: 2735 ILLKLKYAPKVYRKVSGSDVASKFRTDRYHICKEDFDFLWVRTTDFSSVKSIGYLSSLCW 2556
LL+LKY PK+Y+++S SKF DRYHICKEDF+F WVRTTDF KSIG+ +SLCW
Sbjct: 176 FLLQLKYGPKIYKRISRP---SKFVADRYHICKEDFEFHWVRTTDFLESKSIGHSTSLCW 232
Query: 2555 KIEQGSSNVDIYTCLPYYKKDVRELALIEGKKFRSASNMVPLVTNHSDFKLGYEVLFQLN 2376
++ + D + PYY++ +++L L + +F S S VPL+ + L YE+LFQLN
Sbjct: 233 DAKEDFLSSDTFRSFPYYREGMKDLILEDSDEFCSVSETVPLIKCPAGSNLSYEILFQLN 292
Query: 2375 SLVHTHKMSLASVDTDLFQVLSRLDIDSAVLVLQKMHKLESTCFEPVSFITSHWHVINKD 2196
SLVH K+S AS D DL + L+ID+A V+QK+HKL+STC++P+S ++ H++ K+
Sbjct: 293 SLVHMQKISFASADADLIEYFGSLNIDTANAVIQKLHKLKSTCYDPLSLAKTYAHILEKN 352
Query: 2195 GKNLTSASYNRLMNQNVMSCHRVLVTPSKIYCSGPELETSNYIVKNFASYASDFLRVTFV 2016
KN +SA RL ++MSCHR L+TPSKIYC GPELETSNY+VKNFA+YASDFLRVTFV
Sbjct: 353 TKNPSSA-IKRLTENSLMSCHRALITPSKIYCMGPELETSNYVVKNFAAYASDFLRVTFV 411
Query: 2015 DEDWGRLPAGAISTSIKRGIFARPHRTDVYDRILSVLRDGIAIGDKRFEFLAFSASQLRS 1836
+EDWG+L +STSI++GIFA+P+RT +YDRILS+LR+GI IG KR+EFLAFSASQLRS
Sbjct: 412 EEDWGKLHPHVVSTSIEQGIFAKPYRTGIYDRILSILRNGILIGAKRYEFLAFSASQLRS 471
Query: 1835 NSVWMFASNEHVKAEDIREWMGCFNKIRSVSKCAARMGQLFSSSMQTMKVLPREVKVIPD 1656
++VWMFASN++VKAEDIREWMGCFNKIRSVSKCAARMGQLFSSS QT+ V +++++IPD
Sbjct: 472 SAVWMFASNDNVKAEDIREWMGCFNKIRSVSKCAARMGQLFSSSRQTLIVPTQDLEIIPD 531
Query: 1655 IEVISDGVGYCFSDGIGKISCAFAREISRKLGLSHIPSAFQIRYGGYKGVIVVDRSSYVK 1476
+EV +DG+ YCFSDGIGKIS +FAR++++K GL PSAFQIRYGGYKGVI V+RSS+ K
Sbjct: 532 VEVTTDGIDYCFSDGIGKISSSFARQVAQKCGLKETPSAFQIRYGGYKGVIAVNRSSFRK 591
Query: 1475 LALRGSMLKFESKNWMLNVTKWSESMPCYLNREIIILLSTLGIEDDVFXXXXXXXXXXXX 1296
L+LR SMLKFES N MLNVTKWS SMPCYLNREI+ LLS+LG++D+ F
Sbjct: 592 LSLRSSMLKFESSNRMLNVTKWSGSMPCYLNREIVSLLSSLGVKDESFLALLREQLLLLG 651
Query: 1295 XXLTNREAALKVLESMGGSDGKGVLARMLRQGYEPNREPYLSTMLQSQYENQLSDLRSRS 1116
TNREAAL VLE++ GSD +L +ML QGYEPN EPYLS M+QS YENQLSDL++R
Sbjct: 652 KMRTNREAALNVLENLNGSDSSNILVKMLLQGYEPNAEPYLSMMIQSYYENQLSDLKTRC 711
Query: 1115 RVFVPKGRVLVGCLDETGLLEYGQVYVRITMNKSELQCGEQIFFHKVDSTTSVLKGKVVV 936
R+FVPKG+VL+GCLDETG+LEYGQVYVR+TM K+EL+ G Q FF KVD TS++ GKVVV
Sbjct: 712 RIFVPKGKVLIGCLDETGILEYGQVYVRLTMKKAELEAGNQSFFRKVDDETSIVVGKVVV 771
Query: 935 TKNPCLHPGDVRVLEAVYDAELDEKDLVDCLIFPQKGERPHPNECSGGDLDGDQYFISWD 756
TKNPCLHPGDVRVLEAVYDA+L+E+ LVDCL+FPQKGERPHPNECSGGDLDGD +FISWD
Sbjct: 772 TKNPCLHPGDVRVLEAVYDAKLEEEGLVDCLVFPQKGERPHPNECSGGDLDGDLFFISWD 831
Query: 755 ENLIPARTVEPMDYTGRRPRIMDHDVTLEEIHRFFVDYMVGDTLGAISTAHLVHADREPD 576
NLIP RT PMDY GRRPRIMDHDVTLEEI +FFVDYM+ DTLG ISTAHL+HADREP+
Sbjct: 832 TNLIPPRTTAPMDYIGRRPRIMDHDVTLEEIQKFFVDYMINDTLGGISTAHLIHADREPE 891
Query: 575 KALSSKCLELASLQSMAVDFAKSGAPAEMPRSLKPREFPDFMERWEKPMYISQGALGKIY 396
KA S CL+LA+L SMAVDFAK+GAPAEMPR+L+PR++PDFMER ++PMY+S GALGK+Y
Sbjct: 892 KAFSENCLQLATLHSMAVDFAKTGAPAEMPRALRPRDYPDFMERLDRPMYVSNGALGKLY 951
Query: 395 RAIIESHRHMNTNFDCSSIISQDAYDQDLIVDGYEAFLETAESHKEQYLDRMSTLLNFYE 216
RA +ES ++N S ++ AYD+DL V+G+E F+ AESH++ Y+D+M+ ++N+YE
Sbjct: 952 RATVESESQGSSNLVWSEKTAEAAYDRDLEVNGFEEFIALAESHRDMYIDKMNGIMNYYE 1011
Query: 215 AKSEVEILTGNMRNKSMYLQRDNRRFGEVKDRILGSAKSLQKEAKGWFESCCSGTDQQQL 36
+SE E+LTGN+R ++ YLQRDNRR+ EVKDRIL + KSLQ+EAKGWFE C +QQ++
Sbjct: 1012 LESEDEVLTGNLRKRAAYLQRDNRRYFEVKDRILLAVKSLQREAKGWFEGSCEAMEQQKM 1071
Query: 35 ASAWYYVTYHP 3
ASAWY+VTYHP
Sbjct: 1072 ASAWYHVTYHP 1082
>ref|XP_006476748.1| PREDICTED: RNA-dependent RNA polymerase 2-like [Citrus sinensis]
Length = 1131
Score = 1386 bits (3587), Expect = 0.0
Identities = 686/1100 (62%), Positives = 854/1100 (77%), Gaps = 17/1100 (1%)
Frame = -2
Query: 3251 TARVLNIPQNAIAKELFTFLESTLGKGTIFACEIFTEYNNWKSRGHGRIQFDTPEAKNQA 3072
T V NIPQ AIAK+L FLES LGK ++FA EI T+ +NWKSRG GR+QF + + K++A
Sbjct: 5 TVWVSNIPQTAIAKDLLLFLESKLGKNSVFALEIITDRSNWKSRGIGRVQFTSLDFKSKA 64
Query: 3071 LLLSQQKKLFFRGSHLSLFLAFDDIISRPLEPRNRVGDGMGVVLFAGMMIRGDCFGILEF 2892
LS KL F +L + DI+ RP++ ++RV DG VL G+M + + +L+
Sbjct: 65 QNLSLNDKLVFNSQNLKISETHSDIVPRPVKAQHRVEDG---VLHVGVMCKEERLRVLQT 121
Query: 2891 WDGVKLWVVPERKKLELFL--THEGE---------------SYKLEVQFGDVLETYGCCL 2763
++GV+ W++P+R++LE ++ H GE +K+E+ F DVLET G L
Sbjct: 122 FEGVRGWLLPDRRRLEFWVWPKHNGEWQKGIQECQSDSSDCCFKVEILFEDVLETVGFSL 181
Query: 2762 DGDKQKVDAILLKLKYAPKVYRKVSGSDVASKFRTDRYHICKEDFDFLWVRTTDFSSVKS 2583
D + V+ IL KLKY PK+Y+KVSG VASKF +DRYHICKEDFDF WVRTTDFS KS
Sbjct: 182 D-EGATVNGILFKLKYGPKIYQKVSGPHVASKFPSDRYHICKEDFDFFWVRTTDFSVTKS 240
Query: 2582 IGYLSSLCWKIEQGSSNVDIYTCLPYYKKDVRELALIEGKKFRSASNMVPLVTNHSDFKL 2403
IG +S W+I+ G DI P+YK+D +L L EG++F + S +VPLV F L
Sbjct: 241 IGCSTSFFWEIKNGLLASDISNIFPFYKEDKTDLILEEGEEFCTTSEIVPLVKCRPGFNL 300
Query: 2402 GYEVLFQLNSLVHTHKMSLASVDTDLFQVLSRLDIDSAVLVLQKMHKLESTCFEPVSFIT 2223
+EVLFQLNSLVH K+SL + D +L Q+L+ L +++A++VLQK+HKL+S C++PVSF+
Sbjct: 301 SHEVLFQLNSLVHNQKVSLVAADAELIQILNGLSMETALMVLQKLHKLKSICYDPVSFVK 360
Query: 2222 SHWHVINKDGKNLTSASYNRLMNQNVMSCHRVLVTPSKIYCSGPELETSNYIVKNFASYA 2043
+ HV+ ++ K++ +S+ RL++ NVMSC+R LVTP KIYC GPELETSNY+VKNFA YA
Sbjct: 361 TQLHVLGRNCKSIPLSSHKRLIDHNVMSCYRALVTPMKIYCLGPELETSNYVVKNFAKYA 420
Query: 2042 SDFLRVTFVDEDWGRLPAGAISTSIKRGIFARPHRTDVYDRILSVLRDGIAIGDKRFEFL 1863
SDF+RVTFV+EDW +LPA A+STSI+RGIFA+P+RT +Y RIL++L+DGI IGDK +EFL
Sbjct: 421 SDFMRVTFVEEDWSKLPANALSTSIQRGIFAKPYRTKIYSRILTILQDGIVIGDKHYEFL 480
Query: 1862 AFSASQLRSNSVWMFASNEHVKAEDIREWMGCFNKIRSVSKCAARMGQLFSSSMQTMKVL 1683
AFSASQLR+NSVWMFASN+ V AED+REWMGCFNKI SVSKCAARMGQLFSSS QT+ V
Sbjct: 481 AFSASQLRNNSVWMFASNDEVSAEDVREWMGCFNKIHSVSKCAARMGQLFSSSKQTLVVP 540
Query: 1682 PREVKVIPDIEVISDGVGYCFSDGIGKISCAFAREISRKLGLSHIPSAFQIRYGGYKGVI 1503
++V++IPD+EV SDG YCFSDGIGKIS +FAR++++K GLSH PSAFQIRYGGYKGVI
Sbjct: 541 VQDVEMIPDVEVTSDGNTYCFSDGIGKISLSFARQVAQKCGLSHTPSAFQIRYGGYKGVI 600
Query: 1502 VVDRSSYVKLALRGSMLKFESKNWMLNVTKWSESMPCYLNREIIILLSTLGIEDDVFXXX 1323
VDR+S+ KL+LR SMLKFES+N MLNVTKWSESMPC+LNREII LLSTLG++DDVF
Sbjct: 601 AVDRNSFRKLSLRRSMLKFESRNRMLNVTKWSESMPCFLNREIISLLSTLGVKDDVFEAM 660
Query: 1322 XXXXXXXXXXXLTNREAALKVLESMGGSDGKGVLARMLRQGYEPNREPYLSTMLQSQYEN 1143
L NREAAL VL+ + G D K +L +ML QGYEPN EPYLS ML S +EN
Sbjct: 661 QQQQLILLGKMLINREAALDVLQKLNGVDSKNILVKMLLQGYEPNVEPYLSMMLLSHHEN 720
Query: 1142 QLSDLRSRSRVFVPKGRVLVGCLDETGLLEYGQVYVRITMNKSELQCGEQIFFHKVDSTT 963
QLSDL+SR R++VPKGR+L+GC DETG+L YGQV+VR+TM + EL+ +Q FFH+VD T
Sbjct: 721 QLSDLKSRCRIYVPKGRLLIGCFDETGILNYGQVFVRVTMTREELESKDQSFFHRVDDKT 780
Query: 962 SVLKGKVVVTKNPCLHPGDVRVLEAVYDAELDEKDLVDCLIFPQKGERPHPNECSGGDLD 783
S++KGKV+VTKNPCLHPGDVRVLEAVY+ +L+EKD VDC+IFPQKGERPHPNECSGGDLD
Sbjct: 781 SIVKGKVLVTKNPCLHPGDVRVLEAVYEMKLEEKDYVDCIIFPQKGERPHPNECSGGDLD 840
Query: 782 GDQYFISWDENLIPARTVEPMDYTGRRPRIMDHDVTLEEIHRFFVDYMVGDTLGAISTAH 603
GD +FISWD +LIP T PMDYTGRR RIMDHDVTLEEIH+FFVDYM+ DTLGAISTAH
Sbjct: 841 GDIFFISWDNDLIPCETEPPMDYTGRRSRIMDHDVTLEEIHKFFVDYMINDTLGAISTAH 900
Query: 602 LVHADREPDKALSSKCLELASLQSMAVDFAKSGAPAEMPRSLKPREFPDFMERWEKPMYI 423
LVHADR+PDKA SSKCL LA+L SMAVDFAK+GAPAEMP +LKP+EFPDFMER +KP YI
Sbjct: 901 LVHADRDPDKARSSKCLHLATLHSMAVDFAKTGAPAEMPLALKPKEFPDFMEREDKPRYI 960
Query: 422 SQGALGKIYRAIIESHRHMNTNFDCSSIISQDAYDQDLIVDGYEAFLETAESHKEQYLDR 243
S G LGK+YRA ++S + +N S I++ +YD DL VDG+EAFL AESHKE Y +
Sbjct: 961 SFGVLGKLYRATLDSIMQIRSNAIWSEKIAEASYDHDLEVDGFEAFLGVAESHKEMYEEE 1020
Query: 242 MSTLLNFYEAKSEVEILTGNMRNKSMYLQRDNRRFGEVKDRILGSAKSLQKEAKGWFESC 63
M+ L+N+Y A +E EILTGN+RN++ YLQRDNRR+G++KDRIL SAK+LQ EAK WF S
Sbjct: 1021 MNALMNYYGASTEDEILTGNLRNRASYLQRDNRRYGDMKDRILLSAKNLQNEAKEWFGSS 1080
Query: 62 CSGTDQQQLASAWYYVTYHP 3
C + QLASAWY+VTY P
Sbjct: 1081 CKENEHPQLASAWYHVTYSP 1100
>gb|KDO69723.1| hypothetical protein CISIN_1g001183mg [Citrus sinensis]
Length = 1131
Score = 1384 bits (3581), Expect = 0.0
Identities = 685/1100 (62%), Positives = 854/1100 (77%), Gaps = 17/1100 (1%)
Frame = -2
Query: 3251 TARVLNIPQNAIAKELFTFLESTLGKGTIFACEIFTEYNNWKSRGHGRIQFDTPEAKNQA 3072
T V NIPQ AIAK+L FLES LGK ++FA EI T+ +NWKSRG GR+QF + + K++A
Sbjct: 5 TVWVSNIPQTAIAKDLLLFLESKLGKNSVFALEIITDRSNWKSRGIGRVQFTSLDFKSKA 64
Query: 3071 LLLSQQKKLFFRGSHLSLFLAFDDIISRPLEPRNRVGDGMGVVLFAGMMIRGDCFGILEF 2892
LS KL F +L + DI+ RP++ ++RV DG VL G+M + + +L+
Sbjct: 65 QNLSLNDKLVFNSQNLKISETHSDIVPRPVKAQHRVEDG---VLHVGVMCKEERLRVLQT 121
Query: 2891 WDGVKLWVVPERKKLELFL--THEGE---------------SYKLEVQFGDVLETYGCCL 2763
++GV+ W++P+R++LE ++ H GE +K+E+ F DVLET G L
Sbjct: 122 FEGVRGWLLPDRRRLEFWVWPKHNGEWQKGIQECQSDSSDCCFKVEILFEDVLETVGFSL 181
Query: 2762 DGDKQKVDAILLKLKYAPKVYRKVSGSDVASKFRTDRYHICKEDFDFLWVRTTDFSSVKS 2583
D + V+ IL KLKY PK+Y+KVSG VASKF +DRYHICKEDFDF WVRTTDFS KS
Sbjct: 182 D-EGATVNGILFKLKYGPKIYQKVSGPHVASKFPSDRYHICKEDFDFFWVRTTDFSVTKS 240
Query: 2582 IGYLSSLCWKIEQGSSNVDIYTCLPYYKKDVRELALIEGKKFRSASNMVPLVTNHSDFKL 2403
IG +S W+I+ G DI P+YK+D +L L EG++F + S +VPLV F L
Sbjct: 241 IGCSTSFFWEIKNGLLASDISNIFPFYKEDKTDLILEEGEEFCTTSEIVPLVKCRPGFNL 300
Query: 2402 GYEVLFQLNSLVHTHKMSLASVDTDLFQVLSRLDIDSAVLVLQKMHKLESTCFEPVSFIT 2223
+EVLFQLNSLVH K+SL + D +L Q+LS L +++A++VLQK+HKL+S C++PVSF+
Sbjct: 301 SHEVLFQLNSLVHNQKVSLVAADAELIQILSGLSMETALMVLQKLHKLKSICYDPVSFVK 360
Query: 2222 SHWHVINKDGKNLTSASYNRLMNQNVMSCHRVLVTPSKIYCSGPELETSNYIVKNFASYA 2043
+ HV+ ++ K++ +S+ RL++ NVMSC+R LVTP KIYC GPELETSNY+VKNFA YA
Sbjct: 361 TQLHVLGRNCKSIPLSSHKRLIDHNVMSCYRALVTPMKIYCLGPELETSNYVVKNFAKYA 420
Query: 2042 SDFLRVTFVDEDWGRLPAGAISTSIKRGIFARPHRTDVYDRILSVLRDGIAIGDKRFEFL 1863
SDF+RVTFV+EDW +LPA A+STSI+RGIF++P+RT +Y RIL++L+DGI IGDK +EFL
Sbjct: 421 SDFMRVTFVEEDWSKLPANALSTSIQRGIFSKPYRTKIYSRILTILQDGIVIGDKHYEFL 480
Query: 1862 AFSASQLRSNSVWMFASNEHVKAEDIREWMGCFNKIRSVSKCAARMGQLFSSSMQTMKVL 1683
AFSASQLR+NSVWMFASN+ V AED+R WMGCFNKIRSVSKCAARMGQLFSSS QT+ V
Sbjct: 481 AFSASQLRNNSVWMFASNDEVSAEDVRGWMGCFNKIRSVSKCAARMGQLFSSSKQTLVVP 540
Query: 1682 PREVKVIPDIEVISDGVGYCFSDGIGKISCAFAREISRKLGLSHIPSAFQIRYGGYKGVI 1503
++V++IPD+EV SDG YCFSDGIGKIS +FAR++++K GLSH PSAFQIRYGGYKGVI
Sbjct: 541 VQDVEMIPDVEVTSDGNTYCFSDGIGKISLSFARQVAQKCGLSHTPSAFQIRYGGYKGVI 600
Query: 1502 VVDRSSYVKLALRGSMLKFESKNWMLNVTKWSESMPCYLNREIIILLSTLGIEDDVFXXX 1323
VDR+S+ KL+LR SMLKFES+N MLNVTKWSESMPC+LNREII LLSTLG++D+VF
Sbjct: 601 AVDRNSFRKLSLRRSMLKFESRNRMLNVTKWSESMPCFLNREIISLLSTLGVKDEVFEAM 660
Query: 1322 XXXXXXXXXXXLTNREAALKVLESMGGSDGKGVLARMLRQGYEPNREPYLSTMLQSQYEN 1143
L NREAAL VL+ + G D K +L +ML QGYEPN EPYLS ML S +EN
Sbjct: 661 QQQQLILLGKMLINREAALDVLQKLNGVDSKNILVKMLLQGYEPNVEPYLSMMLLSHHEN 720
Query: 1142 QLSDLRSRSRVFVPKGRVLVGCLDETGLLEYGQVYVRITMNKSELQCGEQIFFHKVDSTT 963
QLSDL+SR R++VPKGR+L+GC DETG+L YGQV+VR+TM + EL+ +Q FFH+VD T
Sbjct: 721 QLSDLKSRCRIYVPKGRLLIGCFDETGILNYGQVFVRVTMTREELESKDQSFFHRVDDKT 780
Query: 962 SVLKGKVVVTKNPCLHPGDVRVLEAVYDAELDEKDLVDCLIFPQKGERPHPNECSGGDLD 783
S++KGKV+VTKNPCLHPGDVRVLEAVY+ +L+EKD VDC+IFPQKGERPHPNECSGGDLD
Sbjct: 781 SIVKGKVLVTKNPCLHPGDVRVLEAVYEMKLEEKDYVDCIIFPQKGERPHPNECSGGDLD 840
Query: 782 GDQYFISWDENLIPARTVEPMDYTGRRPRIMDHDVTLEEIHRFFVDYMVGDTLGAISTAH 603
GD +FISWD +LIP T PMDYTGRR RIMDHDVTLEEIH+FFVDYM+ DTLGAISTAH
Sbjct: 841 GDIFFISWDNDLIPCETEPPMDYTGRRSRIMDHDVTLEEIHKFFVDYMINDTLGAISTAH 900
Query: 602 LVHADREPDKALSSKCLELASLQSMAVDFAKSGAPAEMPRSLKPREFPDFMERWEKPMYI 423
LVHADR+PDKA SSKCL LA+L SMAVDFAK+GAPAEMP +LKP+EFPDFMER +KP YI
Sbjct: 901 LVHADRDPDKARSSKCLHLATLHSMAVDFAKTGAPAEMPLALKPKEFPDFMEREDKPRYI 960
Query: 422 SQGALGKIYRAIIESHRHMNTNFDCSSIISQDAYDQDLIVDGYEAFLETAESHKEQYLDR 243
S G LGK+YRA ++S + +N S I++ +YD DL VDG+EAFL AESHKE Y +
Sbjct: 961 SFGVLGKLYRATLDSIMQIRSNAIWSEKIAEASYDHDLEVDGFEAFLGVAESHKEMYEEE 1020
Query: 242 MSTLLNFYEAKSEVEILTGNMRNKSMYLQRDNRRFGEVKDRILGSAKSLQKEAKGWFESC 63
M+ L+N+Y A +E EILTGN+RN++ YLQRDNRR+G++KDRIL SAK+LQ EAK WF S
Sbjct: 1021 MNALMNYYGASTEDEILTGNLRNRASYLQRDNRRYGDMKDRILLSAKNLQNEAKEWFGSS 1080
Query: 62 CSGTDQQQLASAWYYVTYHP 3
C + QLASAWY+VTY P
Sbjct: 1081 CKENEHPQLASAWYHVTYSP 1100
>ref|XP_004508850.1| PREDICTED: RNA-dependent RNA polymerase 2 [Cicer arietinum]
Length = 1122
Score = 1380 bits (3571), Expect = 0.0
Identities = 667/1089 (61%), Positives = 860/1089 (78%), Gaps = 3/1089 (0%)
Frame = -2
Query: 3260 QTLTARVLNIPQNAIAKELFTFLESTLGKGTIFACEIFTEYNNWKSRGHGRIQFDTPEAK 3081
+T T RV NIPQ+A AK+L FLEST+G ++FA EIF++++NWKSRG GR+QF+T EAK
Sbjct: 7 ETPTVRVFNIPQSATAKDLLHFLESTVGPSSVFALEIFSDHSNWKSRGSGRVQFETFEAK 66
Query: 3080 NQALLLSQQKKLFFRGSHLSLFLAFDDIISRPLEPRNRVGDGMGVVLFAGMMIRGDCFGI 2901
++AL LS KL F L L + DDI+ RP P NR+ +G L AG + D +
Sbjct: 67 SKALSLSSNDKLLFNSHFLRLAASSDDIVPRPPLPCNRLHNG---TLHAGFPLGPDRMSV 123
Query: 2900 LEFWDGVKLWVVPERKKLELFLTHEGESYKLEVQFGDVLETYGCCLDGDKQKVDAILLKL 2721
++ W+GVK WV+PER +L+ ++TH + +KLE+ F ++LE G DG K +A+LLKL
Sbjct: 124 IQSWEGVKGWVMPERNRLDFWVTHHDQCFKLEIPFENILECDGFSSDGSKP--NALLLKL 181
Query: 2720 KYAPKVYRKVSGSDVASKFRTDRYHICKEDFDFLWVRTTDFSSVKSIGYLSSLCWKIEQG 2541
KY P++Y+++ G +V++KF+ DRY CKEDF F+WVRTTDFS +KSIG+ +S CW+IE+
Sbjct: 182 KYGPRIYQRMEGPNVSAKFKADRYRFCKEDFAFMWVRTTDFSRLKSIGHSTSFCWEIEEE 241
Query: 2540 SSNVDIYTCLPYYKKDVRELALIEGKKFRSASNMVPLVTNHSDFKLGYEVLFQLNSLVHT 2361
SS+ D++ P Y++++++L+L +G++F S + VPLV D KL YE LFQLNSLVHT
Sbjct: 242 SSDSDVFRSFPLYRENLKDLSLEDGEEFCSPTETVPLVKCRLDTKLPYEALFQLNSLVHT 301
Query: 2360 HKMSLASVDTDLFQVLSRLDIDSAVLVLQKMHKLESTCFEPVSFITSHWHVINKDGKNLT 2181
K+SLASVD +L +++ LD ++ ++ QK+HK+ STC+EP+ F+ + HV++ K+L
Sbjct: 302 QKISLASVDDELIDLIASLDDETKAVIFQKLHKMSSTCYEPLRFVKTQLHVLSIKKKSLR 361
Query: 2180 SASYNRLMNQNVMSCHRVLVTPSKIYCSGPELETSNYIVKNFASYASDFLRVTFVDEDWG 2001
+S RL + N+MSCHR L+TPSKIYC GPELETSN++VK+FASYASDF+R+TFV+EDW
Sbjct: 362 PSSQKRLADNNIMSCHRALITPSKIYCLGPELETSNHVVKHFASYASDFMRITFVEEDWS 421
Query: 2000 RLPAGAISTSIKRGIFARPHRTDVYDRILSVLRDGIAIGDKRFEFLAFSASQLRSNSVWM 1821
+LP A+STS+++GIFA+P RTD+Y R+L++LRDGI IG KRFEFLAFSASQLRSNSVW+
Sbjct: 422 KLPINAVSTSLQKGIFAKPFRTDIYKRVLTILRDGIVIGSKRFEFLAFSASQLRSNSVWL 481
Query: 1820 FASNEHVKAEDIREWMGCFNKIRSVSKCAARMGQLFSSSMQTMKVLPREVKVIPDIEVIS 1641
FASN+ VKAEDIREWMG F IRSVSKCAARMGQLFSSS QT ++ P++V +IPDIE+ S
Sbjct: 482 FASNDKVKAEDIREWMGSFTNIRSVSKCAARMGQLFSSSKQTFEMAPQDVDIIPDIELTS 541
Query: 1640 DGVGYCFSDGIGKISCAFAREISRKLGL--SHIPSAFQIRYGGYKGVIVVDRSSYVKLAL 1467
DG+ YCFSDGIGKIS +FA+++++KL L S IPSAFQIRYGGYKGVI VDR S+ KL++
Sbjct: 542 DGINYCFSDGIGKISLSFAKQLAQKLKLDQSRIPSAFQIRYGGYKGVIAVDRHSFRKLSM 601
Query: 1466 RGSMLKFESKNWMLNVTKWSESMPCYLNREIIILLSTLGIEDDVFXXXXXXXXXXXXXXL 1287
R SMLKFESKN ML VTKWSESMPC+LNREII LLSTLG++D+ L
Sbjct: 602 RNSMLKFESKNRMLCVTKWSESMPCFLNREIISLLSTLGVKDEALLAMQEEQLQLLGKML 661
Query: 1286 TNREAALKVLESMGGSDGKGVLARMLRQGYEPNREPYLSTMLQSQYENQLSDLRSRSRVF 1107
T+REAAL VLES+ G+D + +L +ML YEPN EPYLS ML++ Y QLSDL+SR R+F
Sbjct: 662 TDREAALDVLESLSGADSRSILVKMLNGFYEPNSEPYLSMMLKAHYAYQLSDLKSRCRIF 721
Query: 1106 VPKGRVLVGCLDETGLLEYGQVYVRITMNKSELQCGEQIFFH-KVDSTTSVLKGKVVVTK 930
VPKGRVL+GCLDETG+L YGQV+VRIT+ K++ + G++ + D +T ++ GKVVVTK
Sbjct: 722 VPKGRVLIGCLDETGILNYGQVFVRITVTKTKEKIGDENLQNVDGDDSTRIIVGKVVVTK 781
Query: 929 NPCLHPGDVRVLEAVYDAELDEKDLVDCLIFPQKGERPHPNECSGGDLDGDQYFISWDEN 750
NPCLHPGD+RVL+A+Y+ EL+EK L DCL+FPQKG RPHPNECSGGDLDGD +FISWD++
Sbjct: 782 NPCLHPGDIRVLDAIYNEELEEKGLRDCLVFPQKGPRPHPNECSGGDLDGDLFFISWDKD 841
Query: 749 LIPARTVEPMDYTGRRPRIMDHDVTLEEIHRFFVDYMVGDTLGAISTAHLVHADREPDKA 570
LIP +T PMDYTGRRPRIMDH VTLEEIH+FFVDYM+ DTLGAISTAHLVHADREP+KA
Sbjct: 842 LIPPQTDNPMDYTGRRPRIMDHKVTLEEIHQFFVDYMINDTLGAISTAHLVHADREPEKA 901
Query: 569 LSSKCLELASLQSMAVDFAKSGAPAEMPRSLKPREFPDFMERWEKPMYISQGALGKIYRA 390
S KCLELA L SMAVDFAK+GAPAEMPR+LKPREFPDFMER++KPMYIS G LGK+YRA
Sbjct: 902 RSRKCLELAELHSMAVDFAKTGAPAEMPRALKPREFPDFMERFDKPMYISNGVLGKLYRA 961
Query: 389 IIESHRHMNTNFDCSSIISQDAYDQDLIVDGYEAFLETAESHKEQYLDRMSTLLNFYEAK 210
++ES + +N S +++AYD L V+G+EAFLETA SHKE Y +MS+L++FY+A+
Sbjct: 962 LVESTTQVRSNIVLSEKFAEEAYDHQLEVNGFEAFLETASSHKEMYAQKMSSLMSFYDAE 1021
Query: 209 SEVEILTGNMRNKSMYLQRDNRRFGEVKDRILGSAKSLQKEAKGWFESCCSGTDQQQLAS 30
+E E+LTGN++N++ YLQRDNRR+G++KDRIL S K LQ+EAK WFES C + Q +AS
Sbjct: 1022 TEDEMLTGNLQNRASYLQRDNRRYGDMKDRILISVKDLQREAKEWFESDCQPHEYQLMAS 1081
Query: 29 AWYYVTYHP 3
AWY+VTYHP
Sbjct: 1082 AWYHVTYHP 1090
>gb|KHG14638.1| RNA-dependent RNA polymerase 2 -like protein [Gossypium arboreum]
Length = 1147
Score = 1379 bits (3568), Expect = 0.0
Identities = 681/1091 (62%), Positives = 847/1091 (77%), Gaps = 3/1091 (0%)
Frame = -2
Query: 3266 ERQTLTARVLNIPQNAIAKELFTFLESTLGKGTIFACEIFTEYNNWKSRGHGRIQFDTPE 3087
ER TL R+ NIPQ A+AK+L F ES LG ++FA EI T+ NNWKSRG GR+QF P+
Sbjct: 7 ERPTL--RLTNIPQTAVAKDLLDFFESKLGPDSVFAIEISTDRNNWKSRGFGRVQFAAPQ 64
Query: 3086 AKNQALLLSQQKKLFFRGSHLSLFLAFDDIISRPLEPRNRVGDGMGVVLFAGMMIRGDCF 2907
A + AL LS+ L F+ L L +DDII RP+ +R+ G VL AG M DC
Sbjct: 65 AMSDALRLSRHDHLLFKSHSLKLSRTYDDIIPRPIRADHRLDGG---VLHAGFMSSDDCL 121
Query: 2906 GILEFWDGVKLWVVPERKKLELFLTHEGESYKLEVQFGDVLETYGCCLDGDKQKVDAILL 2727
+LE W+GV+ W++PER++LE ++ +GE YKL+ F D+ ET GCC DG +A+LL
Sbjct: 122 RVLERWEGVRGWIMPERRRLEFWVWTDGECYKLDFLFDDLFETVGCCFDGSA--CNALLL 179
Query: 2726 KLKYAPKVYRKVSGSDVASKFRTDRYHICKEDFDFLWVRTTDFSSVKSIGYLSSLCWKIE 2547
+++YAP++YRKVSG +VASKF TDRYHICKE FDFLWVRTTDFS +KSIG +S W+
Sbjct: 180 RVRYAPRIYRKVSGPNVASKFSTDRYHICKEKFDFLWVRTTDFSRIKSIGQSTSFYWEFN 239
Query: 2546 QGSSNVDIYTCLPYYKKDVRELALIEGKKFRSASNMVPLVTNHSDFKLGYEVLFQLNSLV 2367
G S D+ T LP Y++D++ +L +F S S +VPLV SD KL YE+LFQLN+LV
Sbjct: 240 AGFSISDMSTYLPCYREDIQSPSLEARGEFSSPSEIVPLVKFPSDSKLAYEILFQLNALV 299
Query: 2366 HTHKMSLASVDTDLFQVLSRLDIDSAVLVLQKMHKLESTCFEPVSFITSHWHVINKDGKN 2187
HT K+S+A+VDTDL +LS L +++AV++LQK+ L+S C+ PVSF+ + GKN
Sbjct: 300 HTQKISIAAVDTDLIGILSVLPVETAVMILQKLRLLQSPCYNPVSFVKAKLPT----GKN 355
Query: 2186 --LTSASYNRLMNQNVMSCHRVLVTPSKIYCSGPELETSNYIVKNFASYASDFLRVTFVD 2013
+ + RL N NVMSCHR L+TP+KIYC GPELET+NY+VKNFA YASDF+RVTFV+
Sbjct: 356 YRIPLSVSERLKNHNVMSCHRALITPTKIYCLGPELETANYVVKNFAEYASDFMRVTFVE 415
Query: 2012 EDWGRLPAGAISTSIKRGIFARPHRTDVYDRILSVLRDGIAIGDKRFEFLAFSASQLRSN 1833
EDW +L A AIST + G+F+RP +T +YDRILSVL++GI IGDKRF+FLAFSASQLRSN
Sbjct: 416 EDWSKLSANAISTGVHLGVFSRPFKTKIYDRILSVLQNGIVIGDKRFKFLAFSASQLRSN 475
Query: 1832 SVWMFASNEHVKAEDIREWMGCFNKIRSVSKCAARMGQLFSSSMQTMKVLPREVKVIPDI 1653
SVWMFASN+ VKAEDIREWMGCF KIRS+SKCA+RMGQLFSSSM T+ V ++V++I DI
Sbjct: 476 SVWMFASNDEVKAEDIREWMGCFKKIRSISKCASRMGQLFSSSMPTLVVPVQDVEIIDDI 535
Query: 1652 EVISDGVGYCFSDGIGKISCAFAREISRKLGLSHIPSAFQIRYGGYKGVIVVDRSSYVKL 1473
EV +DG+ YCFSDGIGKIS FAR+++ K GL+HIPSAFQIRYGGYKGV+ VDR+S+ K+
Sbjct: 536 EVKTDGINYCFSDGIGKISLPFARQVAEKCGLNHIPSAFQIRYGGYKGVVAVDRNSFWKM 595
Query: 1472 ALRGSMLKFESKNWMLNVTKWSESMPCYLNREIIILLSTLGIEDDVFXXXXXXXXXXXXX 1293
+LR SMLKFESK MLNVTKWSESMPC+LNREI+ L STLGI+D+VF
Sbjct: 596 SLRDSMLKFESKVRMLNVTKWSESMPCFLNREIVTLFSTLGIKDEVFERMQEEQLCLLGK 655
Query: 1292 XLTNREAALKVLESMGGSDGKGVLARMLRQGYEPNREPYLSTMLQSQYENQLSDLRSRSR 1113
+TNREAAL L+S+GG + K +L ML Q YEPN +PYLS MLQ+ YEN LSDL+SR R
Sbjct: 656 MVTNREAALDTLQSLGGVNSKNILVEML-QFYEPNVQPYLSMMLQAHYENLLSDLKSRCR 714
Query: 1112 VFVPKGRVLVGCLDETGLLEYGQVYVRITMNKSELQCGEQIFFHKVDSTTSVLKGKVVVT 933
+FVPKGR+L+GCLDETG L YGQVY+ I M K+EL+C +Q +F KVD T+++ GKVVVT
Sbjct: 715 IFVPKGRILIGCLDETGTLNYGQVYLCIKMKKAELECADQSYFRKVDEETAIVIGKVVVT 774
Query: 932 KNPCLHPGDVRVLEAVYDAELDEKDLVDCLIFPQKGERPHPNECSGGDLDGDQYFISWDE 753
KNPCLHPGDVRVLEAVY+ +L+EK LVDCL+FP+KGERPHPNECSGGDLDGDQ+FISWD+
Sbjct: 775 KNPCLHPGDVRVLEAVYEPQLEEKGLVDCLVFPEKGERPHPNECSGGDLDGDQFFISWDK 834
Query: 752 NLIPARTVEPMDYTGRRPRIMDHDVTLEEIHRFFVDYMVGDTLGAISTAHLVHADREPDK 573
+LIP +T PMDYTG+RPRIMDH+VTLEEI +FFVDYM+ DTLGAISTAHLVHADREPDK
Sbjct: 835 DLIPCQTEPPMDYTGQRPRIMDHEVTLEEIQKFFVDYMINDTLGAISTAHLVHADREPDK 894
Query: 572 ALSSKCLELASLQSMAVDFAKSGAPAEMPRSLKPREFPDFMERWEKPMYISQGALGKIYR 393
A S CL LA+L SMAVDFAK+GAPAEMPR+LKPREFPDFM+R KPMY S G LGK+YR
Sbjct: 895 ARSENCLALATLHSMAVDFAKTGAPAEMPRALKPREFPDFMQRGNKPMYTSSGVLGKLYR 954
Query: 392 AIIESHRHMNTNFDCSSIISQDAYDQDLIVDGYEAFLETAESHKEQYLDRMSTLLNFYEA 213
A I S + + F + +++ AYD DL V+G+E+ + AE+HKE Y +RMS L+++Y+
Sbjct: 955 ATINSTVQIRSKFVWTKEMAELAYDHDLEVNGFESLISVAETHKEMYEERMSLLMSYYDV 1014
Query: 212 KSEVEILTGNMRNKSMYLQRDNRRFGEVKDRILGSAKSLQKEAKGWFESCCSGTDQ-QQL 36
+ E EILTGNM NK+ +L RDNRR+GE+K+RI+ S K LQ+EAK WF+S CS D+ Q+L
Sbjct: 1015 EYEDEILTGNMYNKAQFLLRDNRRYGEMKERIVLSVKDLQREAKEWFKSSCSKADEHQKL 1074
Query: 35 ASAWYYVTYHP 3
ASAWYYVTYHP
Sbjct: 1075 ASAWYYVTYHP 1085
>ref|NP_001267608.1| RNA-dependent RNA polymerase 2-like [Cucumis sativus]
gi|316989905|gb|ADU77018.1| RNA-dependent RNA polymerase
2 [Cucumis sativus] gi|700208501|gb|KGN63597.1|
hypothetical protein Csa_1G005580 [Cucumis sativus]
Length = 1117
Score = 1377 bits (3563), Expect = 0.0
Identities = 669/1092 (61%), Positives = 858/1092 (78%)
Frame = -2
Query: 3278 IAMEERQTLTARVLNIPQNAIAKELFTFLESTLGKGTIFACEIFTEYNNWKSRGHGRIQF 3099
+A ER TL RV N+P++AIA++L FL S LG ++FA EIFTE NWKSRG GR+QF
Sbjct: 1 MAQPERSTL--RVSNVPESAIAQDLLNFLNSKLGPDSVFAIEIFTERKNWKSRGSGRVQF 58
Query: 3098 DTPEAKNQALLLSQQKKLFFRGSHLSLFLAFDDIISRPLEPRNRVGDGMGVVLFAGMMIR 2919
T EAK +A+ LS Q L F +L L DDI+ RP+ NR +G VL G M++
Sbjct: 59 TTLEAKAKAMSLSVQNSLVFGTQNLRFSLINDDIVVRPVHATNRTENG---VLHVGFMLK 115
Query: 2918 GDCFGILEFWDGVKLWVVPERKKLELFLTHEGESYKLEVQFGDVLETYGCCLDGDKQKVD 2739
+ +LE W+GVK W++PER+++E ++ HE E YKLEV F ++LET G CL ++K++
Sbjct: 116 EERMSVLESWEGVKAWIMPERRRIEFWIWHEQECYKLEVMFEEILETTGHCLG--EEKLN 173
Query: 2738 AILLKLKYAPKVYRKVSGSDVASKFRTDRYHICKEDFDFLWVRTTDFSSVKSIGYLSSLC 2559
A+LLKLKYAP++Y+K+SGS++AS+F + RY +C ED+D+LWVRTT+FS ++S+G +S C
Sbjct: 174 ALLLKLKYAPRIYKKISGSNMASRFSSTRYRLCIEDYDYLWVRTTEFSPMRSVGQSTSFC 233
Query: 2558 WKIEQGSSNVDIYTCLPYYKKDVRELALIEGKKFRSASNMVPLVTNHSDFKLGYEVLFQL 2379
W++E+ DI++C P+YK+ +++ L +G++F S S +VPL+ + L YEV +QL
Sbjct: 234 WEVEEDLQASDIFSCFPFYKETQKDIVLEDGEEFCSTSEIVPLIKSGLGSNLAYEVEYQL 293
Query: 2378 NSLVHTHKMSLASVDTDLFQVLSRLDIDSAVLVLQKMHKLESTCFEPVSFITSHWHVINK 2199
NSLVH K+SL++ + DL L LDID+A+ VLQ++H+L+ C++P+SF+ + HV +
Sbjct: 294 NSLVHMQKISLSAANQDLIDFLCTLDIDTALNVLQRLHQLKFVCYDPLSFLKTQLHVYKR 353
Query: 2198 DGKNLTSASYNRLMNQNVMSCHRVLVTPSKIYCSGPELETSNYIVKNFASYASDFLRVTF 2019
+ K+L +S RL N NVM+C+RVLVTPS+IYC GPELETSNY+VKNF+SYASDF+RVTF
Sbjct: 354 NCKSLPPSSQKRLSN-NVMNCYRVLVTPSRIYCLGPELETSNYVVKNFSSYASDFMRVTF 412
Query: 2018 VDEDWGRLPAGAISTSIKRGIFARPHRTDVYDRILSVLRDGIAIGDKRFEFLAFSASQLR 1839
V+EDW +LPAGA++TSI+RGI ++P+RT++Y RI++VLRDGI IG KRFEFLAFSASQLR
Sbjct: 413 VEEDWSKLPAGAVTTSIQRGILSKPYRTEIYHRIMTVLRDGIVIGAKRFEFLAFSASQLR 472
Query: 1838 SNSVWMFASNEHVKAEDIREWMGCFNKIRSVSKCAARMGQLFSSSMQTMKVLPREVKVIP 1659
SNSVWMFAS++++KAE+IR+WMGCF KIRS+SKCAARMGQLFSSS QT+ V R+V++IP
Sbjct: 473 SNSVWMFASSDNLKAEEIRQWMGCFEKIRSISKCAARMGQLFSSSTQTLVVPTRDVEIIP 532
Query: 1658 DIEVISDGVGYCFSDGIGKISCAFAREISRKLGLSHIPSAFQIRYGGYKGVIVVDRSSYV 1479
DIEV +DG+ YCFSDGIGKIS +FAR+++ K G++HIPSAFQIRYGGYKGVI VDR+S+
Sbjct: 533 DIEVNTDGIDYCFSDGIGKISLSFARQVADKCGVNHIPSAFQIRYGGYKGVIAVDRNSFR 592
Query: 1478 KLALRGSMLKFESKNWMLNVTKWSESMPCYLNREIIILLSTLGIEDDVFXXXXXXXXXXX 1299
KL+LR SMLKFESKN MLNVTK +SMPCYLNREI LLSTLG++D+ F
Sbjct: 593 KLSLRDSMLKFESKNKMLNVTKCCDSMPCYLNREIATLLSTLGVKDESFEALQQEQLHLL 652
Query: 1298 XXXLTNREAALKVLESMGGSDGKGVLARMLRQGYEPNREPYLSTMLQSQYENQLSDLRSR 1119
LT+++ AL VLE+ G+D +L +ML GYEPN EPYLS MLQ+ Y N SDLRSR
Sbjct: 653 KRMLTDKDVALNVLENFHGADSNNILVQMLNHGYEPNIEPYLSMMLQAHYWNLFSDLRSR 712
Query: 1118 SRVFVPKGRVLVGCLDETGLLEYGQVYVRITMNKSELQCGEQIFFHKVDSTTSVLKGKVV 939
R+FVPKGR+L+GCLDETG+L YGQVY IT+ KSELQ Q +FH +D T S+L GKVV
Sbjct: 713 CRIFVPKGRILLGCLDETGILNYGQVYACITLTKSELQSRNQNYFHTIDETKSILLGKVV 772
Query: 938 VTKNPCLHPGDVRVLEAVYDAELDEKDLVDCLIFPQKGERPHPNECSGGDLDGDQYFISW 759
VTKNPCLHPGDVRVLEA++ EL+EK LVDCLIFPQKG RPH NECSGGDLDGD YFISW
Sbjct: 773 VTKNPCLHPGDVRVLEAIFHVELEEKGLVDCLIFPQKGARPHTNECSGGDLDGDLYFISW 832
Query: 758 DENLIPARTVEPMDYTGRRPRIMDHDVTLEEIHRFFVDYMVGDTLGAISTAHLVHADREP 579
DENLIP +T PMDYTGRRPRIMDHDV LEEI +FFVDYM+ DTLGAISTAHLVHADREP
Sbjct: 833 DENLIPPKTEAPMDYTGRRPRIMDHDVKLEEIQKFFVDYMINDTLGAISTAHLVHADREP 892
Query: 578 DKALSSKCLELASLQSMAVDFAKSGAPAEMPRSLKPREFPDFMERWEKPMYISQGALGKI 399
KALS+KCLELA+L SMAVDFAK+GAPAEMPR LKPREFPDFMER++KPMYIS LGK+
Sbjct: 893 KKALSAKCLELAALHSMAVDFAKTGAPAEMPRVLKPREFPDFMERFDKPMYISSNVLGKL 952
Query: 398 YRAIIESHRHMNTNFDCSSIISQDAYDQDLIVDGYEAFLETAESHKEQYLDRMSTLLNFY 219
YRA ++S + S ++ YD DL VDG+EAFLE AE++KE Y+++MS L+N+Y
Sbjct: 953 YRAAVKSIEQERSRLVWSEEAARAIYDYDLEVDGFEAFLEIAETYKEMYIEKMSILMNYY 1012
Query: 218 EAKSEVEILTGNMRNKSMYLQRDNRRFGEVKDRILGSAKSLQKEAKGWFESCCSGTDQQQ 39
A+ E EIL G++R+++ YLQRDNR++G++KDRIL S K+L+KE K WFE+ C +++
Sbjct: 1013 GAEYEDEILMGDLRSRASYLQRDNRKYGDMKDRILLSVKNLRKEVKEWFENSCDPLNRRM 1072
Query: 38 LASAWYYVTYHP 3
+ASAWY+VTYHP
Sbjct: 1073 MASAWYHVTYHP 1084