BLASTX nr result
ID: Ephedra29_contig00018601
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra29_contig00018601
(902 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
NP_001148353.1 small nuclear ribonucleoprotein Sm D1 [Zea mays] ... 189 3e-57
NP_001151154.1 uncharacterized protein LOC100284787 [Zea mays] A... 189 3e-57
KXG26521.1 hypothetical protein SORBI_006G115000 [Sorghum bicolor] 187 8e-57
AQK44205.1 Protein FATTY ACID EXPORT 1 chloroplastic [Zea mays] 190 1e-56
XP_002454085.1 hypothetical protein SORBIDRAFT_04g024330 [Sorghu... 187 1e-56
XP_007162409.1 hypothetical protein PHAVU_001G149700g [Phaseolus... 187 1e-56
XP_018847414.1 PREDICTED: small nuclear ribonucleoprotein Sm D1-... 187 1e-56
XP_003590660.1 small nuclear ribonucleoprotein [Medicago truncat... 186 2e-56
XP_015626285.1 PREDICTED: small nuclear ribonucleoprotein Sm D1 ... 186 3e-56
XP_003521240.1 PREDICTED: small nuclear ribonucleoprotein Sm D1-... 186 3e-56
XP_020109850.1 small nuclear ribonucleoprotein Sm D1-like [Anana... 186 4e-56
XP_010547179.1 PREDICTED: small nuclear ribonucleoprotein Sm D1-... 186 4e-56
XP_010551976.1 PREDICTED: small nuclear ribonucleoprotein Sm D1-... 186 5e-56
XP_016739316.1 PREDICTED: small nuclear ribonucleoprotein Sm D1-... 185 6e-56
XP_006652395.1 PREDICTED: small nuclear ribonucleoprotein Sm D1-... 185 6e-56
XP_012473940.1 PREDICTED: small nuclear ribonucleoprotein Sm D1-... 185 6e-56
XP_012476196.1 PREDICTED: small nuclear ribonucleoprotein Sm D1-... 185 6e-56
CDP03613.1 unnamed protein product [Coffea canephora] 187 8e-56
XP_015969542.1 PREDICTED: small nuclear ribonucleoprotein Sm D1-... 185 9e-56
OAY80757.1 Small nuclear ribonucleoprotein Sm D1, partial [Anana... 186 1e-55
>NP_001148353.1 small nuclear ribonucleoprotein Sm D1 [Zea mays] XP_004975919.1
PREDICTED: small nuclear ribonucleoprotein Sm D1-like
[Setaria italica] ACG30989.1 small nuclear
ribonucleoprotein Sm D1 [Zea mays] KQK97664.1
hypothetical protein SETIT_011381mg [Setaria italica]
ONM16794.1 Small nuclear ribonucleoprotein Sm D1 [Zea
mays] ONM16795.1 Small nuclear ribonucleoprotein Sm D1
[Zea mays]
Length = 115
Score = 189 bits (479), Expect = 3e-57
Identities = 93/98 (94%), Positives = 95/98 (96%)
Frame = +3
Query: 213 MKLVRFLMKLNNETVTIELKNGTVVHGTITGVDISMNTHLKTVKLTLKGKNPVTFDHLSV 392
MKLVRFLMKLNNETVTIELKNGTVVHGTITGVDISMNTHLKTVKLTLKGKNPVT DHLSV
Sbjct: 1 MKLVRFLMKLNNETVTIELKNGTVVHGTITGVDISMNTHLKTVKLTLKGKNPVTLDHLSV 60
Query: 393 RGNNIRYYILPDSLNLETLLVEDAPRIKPKKATTGKPL 506
RGNNIRYYILPDSLNLETLLVE+ PR+KPKK TTGKPL
Sbjct: 61 RGNNIRYYILPDSLNLETLLVEETPRVKPKKPTTGKPL 98
>NP_001151154.1 uncharacterized protein LOC100284787 [Zea mays] ACG41805.1 small
nuclear ribonucleoprotein Sm D1 [Zea mays]
Length = 116
Score = 189 bits (479), Expect = 3e-57
Identities = 93/98 (94%), Positives = 95/98 (96%)
Frame = +3
Query: 213 MKLVRFLMKLNNETVTIELKNGTVVHGTITGVDISMNTHLKTVKLTLKGKNPVTFDHLSV 392
MKLVRFLMKLNNETVTIELKNGTVVHGTITGVDISMNTHLKTVKLTLKGKNPVT DHLSV
Sbjct: 1 MKLVRFLMKLNNETVTIELKNGTVVHGTITGVDISMNTHLKTVKLTLKGKNPVTLDHLSV 60
Query: 393 RGNNIRYYILPDSLNLETLLVEDAPRIKPKKATTGKPL 506
RGNNIRYYILPDSLNLETLLVE+ PR+KPKK TTGKPL
Sbjct: 61 RGNNIRYYILPDSLNLETLLVEETPRVKPKKPTTGKPL 98
>KXG26521.1 hypothetical protein SORBI_006G115000 [Sorghum bicolor]
Length = 115
Score = 187 bits (476), Expect = 8e-57
Identities = 92/98 (93%), Positives = 95/98 (96%)
Frame = +3
Query: 213 MKLVRFLMKLNNETVTIELKNGTVVHGTITGVDISMNTHLKTVKLTLKGKNPVTFDHLSV 392
MKLVRFLMKLNNETVTIELKNGTVVHGTITGVDISMNTHLKTVKLTLKGKNPVT DHLSV
Sbjct: 1 MKLVRFLMKLNNETVTIELKNGTVVHGTITGVDISMNTHLKTVKLTLKGKNPVTLDHLSV 60
Query: 393 RGNNIRYYILPDSLNLETLLVEDAPRIKPKKATTGKPL 506
RGNNIRYYILPDSLNLETLLVE+ P++KPKK TTGKPL
Sbjct: 61 RGNNIRYYILPDSLNLETLLVEETPKVKPKKPTTGKPL 98
>AQK44205.1 Protein FATTY ACID EXPORT 1 chloroplastic [Zea mays]
Length = 189
Score = 190 bits (482), Expect = 1e-56
Identities = 94/100 (94%), Positives = 96/100 (96%)
Frame = +3
Query: 207 AAMKLVRFLMKLNNETVTIELKNGTVVHGTITGVDISMNTHLKTVKLTLKGKNPVTFDHL 386
A MKLVRFLMKLNNETVTIELKNGTVVHGTITGVDISMNTHLKTVKLTLKGKNPVT DHL
Sbjct: 72 AKMKLVRFLMKLNNETVTIELKNGTVVHGTITGVDISMNTHLKTVKLTLKGKNPVTLDHL 131
Query: 387 SVRGNNIRYYILPDSLNLETLLVEDAPRIKPKKATTGKPL 506
SVRGNNIRYYILPDSLNLETLLVE+ PR+KPKK TTGKPL
Sbjct: 132 SVRGNNIRYYILPDSLNLETLLVEETPRVKPKKPTTGKPL 171
>XP_002454085.1 hypothetical protein SORBIDRAFT_04g024330 [Sorghum bicolor]
XP_008677413.1 PREDICTED: small nuclear
ribonucleoprotein Sm D1 isoform X1 [Zea mays] ACG24162.1
small nuclear ribonucleoprotein Sm D1 [Zea mays]
ACR36934.1 unknown [Zea mays] EES07061.1 hypothetical
protein SORBI_004G196400 [Sorghum bicolor] AQK53234.1
Small nuclear ribonucleoprotein family protein [Zea
mays]
Length = 114
Score = 187 bits (475), Expect = 1e-56
Identities = 92/98 (93%), Positives = 95/98 (96%)
Frame = +3
Query: 213 MKLVRFLMKLNNETVTIELKNGTVVHGTITGVDISMNTHLKTVKLTLKGKNPVTFDHLSV 392
MKLVRFLMKLNNETVTIELKNGTVVHGTITGVDISMNTHLKTVKLTLKGKNPVT DHLSV
Sbjct: 1 MKLVRFLMKLNNETVTIELKNGTVVHGTITGVDISMNTHLKTVKLTLKGKNPVTLDHLSV 60
Query: 393 RGNNIRYYILPDSLNLETLLVEDAPRIKPKKATTGKPL 506
RGNNIRYYILPDSLNLETLLVE+ PR+KPKK T+GKPL
Sbjct: 61 RGNNIRYYILPDSLNLETLLVEETPRVKPKKPTSGKPL 98
>XP_007162409.1 hypothetical protein PHAVU_001G149700g [Phaseolus vulgaris]
XP_014495349.1 PREDICTED: small nuclear
ribonucleoprotein Sm D1 [Vigna radiata var. radiata]
XP_017411054.1 PREDICTED: small nuclear
ribonucleoprotein Sm D1-like [Vigna angularis]
ESW34403.1 hypothetical protein PHAVU_001G149700g
[Phaseolus vulgaris] BAT85425.1 hypothetical protein
VIGAN_04297300 [Vigna angularis var. angularis]
Length = 114
Score = 187 bits (475), Expect = 1e-56
Identities = 93/98 (94%), Positives = 95/98 (96%)
Frame = +3
Query: 213 MKLVRFLMKLNNETVTIELKNGTVVHGTITGVDISMNTHLKTVKLTLKGKNPVTFDHLSV 392
MKLVRFLMKLNNETV+IELKNGTVVHGTITGVDISMNTHLKTVKLTLKGKNPVT DHLSV
Sbjct: 1 MKLVRFLMKLNNETVSIELKNGTVVHGTITGVDISMNTHLKTVKLTLKGKNPVTLDHLSV 60
Query: 393 RGNNIRYYILPDSLNLETLLVEDAPRIKPKKATTGKPL 506
RGNNIRYYILPDSLNLETLLVE+APRIKPKK T GKPL
Sbjct: 61 RGNNIRYYILPDSLNLETLLVEEAPRIKPKKPTAGKPL 98
>XP_018847414.1 PREDICTED: small nuclear ribonucleoprotein Sm D1-like [Juglans
regia]
Length = 114
Score = 187 bits (474), Expect = 1e-56
Identities = 92/98 (93%), Positives = 95/98 (96%)
Frame = +3
Query: 213 MKLVRFLMKLNNETVTIELKNGTVVHGTITGVDISMNTHLKTVKLTLKGKNPVTFDHLSV 392
MKLVRFLMKLNNETV+IELKNGTVVHGTITGVDISMNTHLKTVKLTLKGKNPVT DHLSV
Sbjct: 1 MKLVRFLMKLNNETVSIELKNGTVVHGTITGVDISMNTHLKTVKLTLKGKNPVTLDHLSV 60
Query: 393 RGNNIRYYILPDSLNLETLLVEDAPRIKPKKATTGKPL 506
RGNNIRYYILPDSLNLETLLVE+APR+KPKK T GKPL
Sbjct: 61 RGNNIRYYILPDSLNLETLLVEEAPRVKPKKPTAGKPL 98
>XP_003590660.1 small nuclear ribonucleoprotein [Medicago truncatula]
XP_004493656.1 PREDICTED: small nuclear
ribonucleoprotein Sm D1-like [Cicer arietinum]
XP_004495217.1 PREDICTED: small nuclear
ribonucleoprotein Sm D1-like [Cicer arietinum]
AES60911.1 small nuclear ribonucleoprotein [Medicago
truncatula]
Length = 114
Score = 186 bits (473), Expect = 2e-56
Identities = 91/98 (92%), Positives = 95/98 (96%)
Frame = +3
Query: 213 MKLVRFLMKLNNETVTIELKNGTVVHGTITGVDISMNTHLKTVKLTLKGKNPVTFDHLSV 392
MKLVRFLMKLNNETV+IELKNGT+VHGTITGVDISMNTHLKTVKLTLKGKNPVT DHLSV
Sbjct: 1 MKLVRFLMKLNNETVSIELKNGTIVHGTITGVDISMNTHLKTVKLTLKGKNPVTLDHLSV 60
Query: 393 RGNNIRYYILPDSLNLETLLVEDAPRIKPKKATTGKPL 506
RGNNIRYYILPDSLNLETLLVE+APR+KPKK T GKPL
Sbjct: 61 RGNNIRYYILPDSLNLETLLVEEAPRVKPKKPTAGKPL 98
>XP_015626285.1 PREDICTED: small nuclear ribonucleoprotein Sm D1 [Oryza sativa
Japonica Group] BAD17484.1 putative small nuclear
ribonucleoprotein D1 polypeptide 16kDa; snRNP core
protein D1; Sm-D autoantigen [Oryza sativa Japonica
Group] BAF09182.1 Os02g0586500 [Oryza sativa Japonica
Group] EAZ23605.1 hypothetical protein OsJ_07305 [Oryza
sativa Japonica Group] BAS79467.1 Os02g0586500 [Oryza
sativa Japonica Group]
Length = 114
Score = 186 bits (472), Expect = 3e-56
Identities = 92/98 (93%), Positives = 93/98 (94%)
Frame = +3
Query: 213 MKLVRFLMKLNNETVTIELKNGTVVHGTITGVDISMNTHLKTVKLTLKGKNPVTFDHLSV 392
MKLVRFLMKLNNETVTIELKNGT VHGTITGVDISMNTHLKTVKLTLKGKNPVTFDHLSV
Sbjct: 1 MKLVRFLMKLNNETVTIELKNGTTVHGTITGVDISMNTHLKTVKLTLKGKNPVTFDHLSV 60
Query: 393 RGNNIRYYILPDSLNLETLLVEDAPRIKPKKATTGKPL 506
RGNNIRYYILPDSLNLETLLVED PR+K KK T GKPL
Sbjct: 61 RGNNIRYYILPDSLNLETLLVEDTPRVKAKKPTAGKPL 98
>XP_003521240.1 PREDICTED: small nuclear ribonucleoprotein Sm D1-like [Glycine max]
KHN19880.1 Small nuclear ribonucleoprotein Sm D1
[Glycine soja] KHN45366.1 Small nuclear
ribonucleoprotein Sm D1 [Glycine soja] KRG95500.1
hypothetical protein GLYMA_19G154600 [Glycine max]
KRH67180.1 hypothetical protein GLYMA_03G152100 [Glycine
max]
Length = 114
Score = 186 bits (472), Expect = 3e-56
Identities = 92/98 (93%), Positives = 95/98 (96%)
Frame = +3
Query: 213 MKLVRFLMKLNNETVTIELKNGTVVHGTITGVDISMNTHLKTVKLTLKGKNPVTFDHLSV 392
MKLVRFLMKLNNETV+IELKNGTVVHGTITGVDISMNTHLKTVKLTLKGKNPVT DHLSV
Sbjct: 1 MKLVRFLMKLNNETVSIELKNGTVVHGTITGVDISMNTHLKTVKLTLKGKNPVTLDHLSV 60
Query: 393 RGNNIRYYILPDSLNLETLLVEDAPRIKPKKATTGKPL 506
RGNNIRYYILPDSLNLETLLVE+AP+IKPKK T GKPL
Sbjct: 61 RGNNIRYYILPDSLNLETLLVEEAPKIKPKKPTAGKPL 98
>XP_020109850.1 small nuclear ribonucleoprotein Sm D1-like [Ananas comosus]
Length = 114
Score = 186 bits (471), Expect = 4e-56
Identities = 91/98 (92%), Positives = 94/98 (95%)
Frame = +3
Query: 213 MKLVRFLMKLNNETVTIELKNGTVVHGTITGVDISMNTHLKTVKLTLKGKNPVTFDHLSV 392
MKLVRFLMKLNNETVTIELKNGTVVHGTITGVDISMNTHLKTVKLTLKGKNPVT DHLSV
Sbjct: 1 MKLVRFLMKLNNETVTIELKNGTVVHGTITGVDISMNTHLKTVKLTLKGKNPVTLDHLSV 60
Query: 393 RGNNIRYYILPDSLNLETLLVEDAPRIKPKKATTGKPL 506
RGNNIRYYILPDSLNLETLLVE+ PR+KPKK T G+PL
Sbjct: 61 RGNNIRYYILPDSLNLETLLVEETPRVKPKKPTAGRPL 98
>XP_010547179.1 PREDICTED: small nuclear ribonucleoprotein Sm D1-like [Tarenaya
hassleriana]
Length = 114
Score = 186 bits (471), Expect = 4e-56
Identities = 91/98 (92%), Positives = 94/98 (95%)
Frame = +3
Query: 213 MKLVRFLMKLNNETVTIELKNGTVVHGTITGVDISMNTHLKTVKLTLKGKNPVTFDHLSV 392
MKLVRFLMKLNNETV+IELKNGTVVHGTITGVD+SMNTHLKTVKLTLKGKNPVT DHLSV
Sbjct: 1 MKLVRFLMKLNNETVSIELKNGTVVHGTITGVDVSMNTHLKTVKLTLKGKNPVTLDHLSV 60
Query: 393 RGNNIRYYILPDSLNLETLLVEDAPRIKPKKATTGKPL 506
RGNNIRYYILPDSLNLETLLVED PRIKPKKA GKP+
Sbjct: 61 RGNNIRYYILPDSLNLETLLVEDTPRIKPKKAAAGKPV 98
>XP_010551976.1 PREDICTED: small nuclear ribonucleoprotein Sm D1-like [Tarenaya
hassleriana]
Length = 116
Score = 186 bits (471), Expect = 5e-56
Identities = 91/98 (92%), Positives = 94/98 (95%)
Frame = +3
Query: 213 MKLVRFLMKLNNETVTIELKNGTVVHGTITGVDISMNTHLKTVKLTLKGKNPVTFDHLSV 392
MKLVRFLMKLNNETV+IELKNGTVVHGTITGVD+SMNTHLKTVKLTLKGKNPVT DHLSV
Sbjct: 1 MKLVRFLMKLNNETVSIELKNGTVVHGTITGVDVSMNTHLKTVKLTLKGKNPVTLDHLSV 60
Query: 393 RGNNIRYYILPDSLNLETLLVEDAPRIKPKKATTGKPL 506
RGNNIRYYILPDSLNLETLLVED PRIKPKKA GKP+
Sbjct: 61 RGNNIRYYILPDSLNLETLLVEDTPRIKPKKAAAGKPV 98
>XP_016739316.1 PREDICTED: small nuclear ribonucleoprotein Sm D1-like [Gossypium
hirsutum]
Length = 114
Score = 185 bits (470), Expect = 6e-56
Identities = 91/98 (92%), Positives = 94/98 (95%)
Frame = +3
Query: 213 MKLVRFLMKLNNETVTIELKNGTVVHGTITGVDISMNTHLKTVKLTLKGKNPVTFDHLSV 392
MKLVRFLMKLNNETV+IELKNGTVVHGTITGVDISMNTHLKTVKLTLKGKNPVT DHLSV
Sbjct: 1 MKLVRFLMKLNNETVSIELKNGTVVHGTITGVDISMNTHLKTVKLTLKGKNPVTMDHLSV 60
Query: 393 RGNNIRYYILPDSLNLETLLVEDAPRIKPKKATTGKPL 506
RGNNIRYYILPDSLNLETLLVE+ PR+KPKK T GKPL
Sbjct: 61 RGNNIRYYILPDSLNLETLLVEETPRVKPKKPTAGKPL 98
>XP_006652395.1 PREDICTED: small nuclear ribonucleoprotein Sm D1-like [Oryza
brachyantha] XP_015635423.1 PREDICTED: small nuclear
ribonucleoprotein Sm D1 [Oryza sativa Japonica Group]
XP_015635424.1 PREDICTED: small nuclear
ribonucleoprotein Sm D1 [Oryza sativa Japonica Group]
CAE03048.2 OSJNBa0089K21.2 [Oryza sativa Japonica Group]
CAH67043.1 OSIGBa0124N08.5 [Oryza sativa Indica Group]
EEE61163.1 hypothetical protein OsJ_15131 [Oryza sativa
Japonica Group] BAF14963.2 Os04g0470200 [Oryza sativa
Japonica Group]
Length = 114
Score = 185 bits (470), Expect = 6e-56
Identities = 92/98 (93%), Positives = 93/98 (94%)
Frame = +3
Query: 213 MKLVRFLMKLNNETVTIELKNGTVVHGTITGVDISMNTHLKTVKLTLKGKNPVTFDHLSV 392
MKLVRFLMKLNNETVTIELKNGTVVHGTITGVDISMNTHLKTVKLTLKGKNPVT DHLSV
Sbjct: 1 MKLVRFLMKLNNETVTIELKNGTVVHGTITGVDISMNTHLKTVKLTLKGKNPVTLDHLSV 60
Query: 393 RGNNIRYYILPDSLNLETLLVEDAPRIKPKKATTGKPL 506
RGNNIRYYILPDSLNLETLLVED PR+K KK T GKPL
Sbjct: 61 RGNNIRYYILPDSLNLETLLVEDTPRVKAKKPTAGKPL 98
>XP_012473940.1 PREDICTED: small nuclear ribonucleoprotein Sm D1-like [Gossypium
raimondii] XP_017624320.1 PREDICTED: small nuclear
ribonucleoprotein Sm D1-like [Gossypium arboreum]
Length = 114
Score = 185 bits (470), Expect = 6e-56
Identities = 91/98 (92%), Positives = 94/98 (95%)
Frame = +3
Query: 213 MKLVRFLMKLNNETVTIELKNGTVVHGTITGVDISMNTHLKTVKLTLKGKNPVTFDHLSV 392
MKLVRFLMKLNNETV+IELKNGTVVHGTITGVDISMNTHLKTVKLTLKGKNPVT DHLSV
Sbjct: 1 MKLVRFLMKLNNETVSIELKNGTVVHGTITGVDISMNTHLKTVKLTLKGKNPVTMDHLSV 60
Query: 393 RGNNIRYYILPDSLNLETLLVEDAPRIKPKKATTGKPL 506
RGNNIRYYILPDSLNLETLLVE+ PR+KPKK T GKPL
Sbjct: 61 RGNNIRYYILPDSLNLETLLVEETPRVKPKKPTAGKPL 98
>XP_012476196.1 PREDICTED: small nuclear ribonucleoprotein Sm D1-like [Gossypium
raimondii] XP_016722277.1 PREDICTED: small nuclear
ribonucleoprotein Sm D1-like [Gossypium hirsutum]
KJB25918.1 hypothetical protein B456_004G215800
[Gossypium raimondii]
Length = 114
Score = 185 bits (470), Expect = 6e-56
Identities = 91/98 (92%), Positives = 94/98 (95%)
Frame = +3
Query: 213 MKLVRFLMKLNNETVTIELKNGTVVHGTITGVDISMNTHLKTVKLTLKGKNPVTFDHLSV 392
MKLVRFLMKLNNETV+IELKNGTVVHGTITGVDISMNTHLKTVKLTLKGKNPVT DHLSV
Sbjct: 1 MKLVRFLMKLNNETVSIELKNGTVVHGTITGVDISMNTHLKTVKLTLKGKNPVTLDHLSV 60
Query: 393 RGNNIRYYILPDSLNLETLLVEDAPRIKPKKATTGKPL 506
RGNNIRYYILPDSLNLETLLVE+ PR+KPKK T GKPL
Sbjct: 61 RGNNIRYYILPDSLNLETLLVEETPRVKPKKPTAGKPL 98
>CDP03613.1 unnamed protein product [Coffea canephora]
Length = 189
Score = 187 bits (476), Expect = 8e-56
Identities = 92/100 (92%), Positives = 96/100 (96%)
Frame = +3
Query: 207 AAMKLVRFLMKLNNETVTIELKNGTVVHGTITGVDISMNTHLKTVKLTLKGKNPVTFDHL 386
A MKLVRFLMKLNNETV+IELKNGTVVHGTITGVDISMNTHLKTVKLTLKGKNPVT DHL
Sbjct: 74 ATMKLVRFLMKLNNETVSIELKNGTVVHGTITGVDISMNTHLKTVKLTLKGKNPVTLDHL 133
Query: 387 SVRGNNIRYYILPDSLNLETLLVEDAPRIKPKKATTGKPL 506
SVRGNNIRYYILPDSLNLETLLVE+ PR+KPKK TTG+PL
Sbjct: 134 SVRGNNIRYYILPDSLNLETLLVEETPRVKPKKPTTGRPL 173
>XP_015969542.1 PREDICTED: small nuclear ribonucleoprotein Sm D1-like [Arachis
duranensis] XP_016204613.1 PREDICTED: small nuclear
ribonucleoprotein Sm D1 [Arachis ipaensis]
XP_017625314.1 PREDICTED: small nuclear
ribonucleoprotein Sm D1-like [Gossypium arboreum]
KHF99961.1 Small nuclear ribonucleoprotein Sm D1
[Gossypium arboreum]
Length = 114
Score = 185 bits (469), Expect = 9e-56
Identities = 90/98 (91%), Positives = 94/98 (95%)
Frame = +3
Query: 213 MKLVRFLMKLNNETVTIELKNGTVVHGTITGVDISMNTHLKTVKLTLKGKNPVTFDHLSV 392
MKLVRFLMKLNNETV+IELKNGT+VHGTITGVDISMNTHLKTVKLTLKGKNPVT DHLSV
Sbjct: 1 MKLVRFLMKLNNETVSIELKNGTIVHGTITGVDISMNTHLKTVKLTLKGKNPVTLDHLSV 60
Query: 393 RGNNIRYYILPDSLNLETLLVEDAPRIKPKKATTGKPL 506
RGNNIRYYILPDSLNLETLLVE+ PR+KPKK T GKPL
Sbjct: 61 RGNNIRYYILPDSLNLETLLVEETPRVKPKKPTAGKPL 98
>OAY80757.1 Small nuclear ribonucleoprotein Sm D1, partial [Ananas comosus]
Length = 140
Score = 186 bits (471), Expect = 1e-55
Identities = 91/98 (92%), Positives = 94/98 (95%)
Frame = +3
Query: 213 MKLVRFLMKLNNETVTIELKNGTVVHGTITGVDISMNTHLKTVKLTLKGKNPVTFDHLSV 392
MKLVRFLMKLNNETVTIELKNGTVVHGTITGVDISMNTHLKTVKLTLKGKNPVT DHLSV
Sbjct: 27 MKLVRFLMKLNNETVTIELKNGTVVHGTITGVDISMNTHLKTVKLTLKGKNPVTLDHLSV 86
Query: 393 RGNNIRYYILPDSLNLETLLVEDAPRIKPKKATTGKPL 506
RGNNIRYYILPDSLNLETLLVE+ PR+KPKK T G+PL
Sbjct: 87 RGNNIRYYILPDSLNLETLLVEETPRVKPKKPTAGRPL 124