BLASTX nr result

ID: Ephedra28_contig00008745 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra28_contig00008745
         (797 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAD83522.2| hypothetical protein (mitochondrion) [Nicotiana ...    62   2e-07
gb|ABD24440.1| succinate dehydrogenase subunit 4 [Populus tricho...    62   2e-07
gb|AAK77854.1|AF362735_1 succinate dehydrogenase subunit 4 [Sola...    62   2e-07
dbj|BAO50913.1| succinate dehydrogenase subunit 4 (mitochondrion...    61   4e-07
ref|XP_002305108.2| succinate dehydrogenase subunit 4 family pro...    61   4e-07
ref|XP_006371678.1| hypothetical protein POPTR_0019s15140g [Popu...    61   4e-07
ref|YP_006280925.1| succinate dehydrogenase subunit 4 (mitochond...    61   4e-07
ref|YP_004237273.1| succinate dehydrogenase subunit 4 (mitochond...    61   4e-07
gb|ABK92762.1| unknown [Populus trichocarpa]                           61   4e-07
gb|ABD24436.1| succinate dehydrogenase subunit 4 [Populus deltoi...    61   4e-07
gb|ABD24439.1| succinate dehydrogenase subunit 4 [Salix gilgiana]      61   4e-07
ref|YP_003587375.1| succinate dehydrogenase subunit 4 [Cucurbita...    60   9e-07
ref|YP_004849351.1| succinate dehydrogenase subunit 4 [Cucumis s...    60   1e-06
ref|YP_173457.1| hypothetical protein NitaMp119 [Nicotiana tabacum]    59   1e-06
ref|XP_006345724.1| PREDICTED: uncharacterized mitochondrial pro...    59   1e-06
ref|YP_008802494.1| succinate dehydrogenase subunit 4 (mitochond...    59   1e-06
gb|AAW47287.1| succinate oxido-reductase subunit 4 [Eschscholzia...    59   1e-06
gb|AAW47281.1| succinate oxido-reductase subunit 4 [Platanus occ...    59   1e-06
ref|YP_003587239.1| succinate dehydrogenase subunit 4 [Citrullus...    59   1e-06
ref|YP_002608211.1| succinate dehydrogenase subunit 4 [Carica pa...    59   1e-06

>dbj|BAD83522.2| hypothetical protein (mitochondrion) [Nicotiana tabacum]
          Length = 125

 Score = 62.4 bits (150), Expect = 2e-07
 Identities = 29/48 (60%), Positives = 36/48 (75%)
 Frame = -3

Query: 516 LGILTFQHISAGIEEILADYVHQGMTRKWILIFLEPALLIAAKDLFVS 373
           L +  F HI+ GIEEI+ADYVHQ MTR WIL++L   LLI  KD+F+S
Sbjct: 68  LNLSLFWHINEGIEEIMADYVHQEMTRNWILVYLRLFLLIVIKDVFLS 115


>gb|ABD24440.1| succinate dehydrogenase subunit 4 [Populus trichocarpa]
          Length = 108

 Score = 62.4 bits (150), Expect = 2e-07
 Identities = 29/48 (60%), Positives = 36/48 (75%)
 Frame = -3

Query: 516 LGILTFQHISAGIEEILADYVHQGMTRKWILIFLEPALLIAAKDLFVS 373
           L +  F HI+ GIEEI+ADYVHQ MTR WIL++L   LLI  KD+F+S
Sbjct: 45  LNLSLFWHINEGIEEIMADYVHQEMTRNWILVYLRLFLLIVIKDVFLS 92


>gb|AAK77854.1|AF362735_1 succinate dehydrogenase subunit 4 [Solanum lycopersicum]
          Length = 100

 Score = 62.4 bits (150), Expect = 2e-07
 Identities = 29/48 (60%), Positives = 36/48 (75%)
 Frame = -3

Query: 516 LGILTFQHISAGIEEILADYVHQGMTRKWILIFLEPALLIAAKDLFVS 373
           L +  F HI+ GIEEI+ADYVHQ MTR WIL++L   LLI  KD+F+S
Sbjct: 45  LNLSLFWHINEGIEEIMADYVHQEMTRNWILVYLRLFLLIVIKDVFLS 92


>dbj|BAO50913.1| succinate dehydrogenase subunit 4 (mitochondrion) [Hevea
           brasiliensis] gi|584592165|dbj|BAO50916.1| succinate
           dehydrogenase subunit 4 (mitochondrion) [Hevea
           brasiliensis]
          Length = 119

 Score = 61.2 bits (147), Expect = 4e-07
 Identities = 28/43 (65%), Positives = 34/43 (79%)
 Frame = -3

Query: 501 FQHISAGIEEILADYVHQGMTRKWILIFLEPALLIAAKDLFVS 373
           F HI+ GIEEI+ADYVHQ MTR WIL++L   LLI  KD+F+S
Sbjct: 73  FWHINEGIEEIMADYVHQEMTRNWILVYLRLFLLIVIKDVFLS 115


>ref|XP_002305108.2| succinate dehydrogenase subunit 4 family protein [Populus
           trichocarpa] gi|550340352|gb|EEE85619.2| succinate
           dehydrogenase subunit 4 family protein [Populus
           trichocarpa]
          Length = 273

 Score = 61.2 bits (147), Expect = 4e-07
 Identities = 27/46 (58%), Positives = 36/46 (78%)
 Frame = -3

Query: 510 ILTFQHISAGIEEILADYVHQGMTRKWILIFLEPALLIAAKDLFVS 373
           +  F+HI+ GI+EI+ADYVHQ MTR WIL++L   LLI  KD+F+S
Sbjct: 226 LFLFRHINEGIKEIMADYVHQEMTRNWILVYLRLFLLIVIKDVFLS 271


>ref|XP_006371678.1| hypothetical protein POPTR_0019s15140g [Populus trichocarpa]
           gi|550317608|gb|ERP49475.1| hypothetical protein
           POPTR_0019s15140g [Populus trichocarpa]
          Length = 98

 Score = 61.2 bits (147), Expect = 4e-07
 Identities = 28/43 (65%), Positives = 34/43 (79%)
 Frame = -3

Query: 501 FQHISAGIEEILADYVHQGMTRKWILIFLEPALLIAAKDLFVS 373
           F HI+ GIEEI+ADYVHQ MTR WIL++L   LLI  KD+F+S
Sbjct: 40  FWHINEGIEEIMADYVHQEMTRNWILVYLRLFLLIVIKDVFLS 82


>ref|YP_006280925.1| succinate dehydrogenase subunit 4 (mitochondrion) [Spirodela
           polyrhiza] gi|385252626|gb|AFI54934.1| succinate
           dehydrogenase subunit 4 (mitochondrion) [Spirodela
           polyrhiza]
          Length = 150

 Score = 61.2 bits (147), Expect = 4e-07
 Identities = 28/45 (62%), Positives = 35/45 (77%)
 Frame = -3

Query: 510 ILTFQHISAGIEEILADYVHQGMTRKWILIFLEPALLIAAKDLFV 376
           I  F HI+ GIEEI+ADYVHQ +TRKWIL++L   LLI  KD+F+
Sbjct: 70  ISVFWHINVGIEEIMADYVHQEITRKWILVYLRLFLLIVIKDVFL 114


>ref|YP_004237273.1| succinate dehydrogenase subunit 4 (mitochondrion) [Ricinus
           communis] gi|322394280|gb|ADW96037.1| succinate
           dehydrogenase subunit 4 (mitochondrion) [Ricinus
           communis]
          Length = 130

 Score = 61.2 bits (147), Expect = 4e-07
 Identities = 28/43 (65%), Positives = 34/43 (79%)
 Frame = -3

Query: 501 FQHISAGIEEILADYVHQGMTRKWILIFLEPALLIAAKDLFVS 373
           F HI+ GIEEI+ADYVHQ MTR WIL++L   LLI  KD+F+S
Sbjct: 73  FWHINEGIEEIMADYVHQEMTRNWILVYLRLFLLIVIKDVFLS 115


>gb|ABK92762.1| unknown [Populus trichocarpa]
          Length = 273

 Score = 61.2 bits (147), Expect = 4e-07
 Identities = 27/46 (58%), Positives = 36/46 (78%)
 Frame = -3

Query: 510 ILTFQHISAGIEEILADYVHQGMTRKWILIFLEPALLIAAKDLFVS 373
           +  F+HI+ GI+EI+ADYVHQ MTR WIL++L   LLI  KD+F+S
Sbjct: 226 LFLFRHINEGIKEIMADYVHQEMTRNWILVYLRLFLLIVIKDVFLS 271


>gb|ABD24436.1| succinate dehydrogenase subunit 4 [Populus deltoides]
           gi|87133590|gb|ABD24437.1| succinate dehydrogenase
           subunit 4 [Populus nigra] gi|87133592|gb|ABD24438.1|
           succinate dehydrogenase subunit 4 [Populus tremuloides]
          Length = 106

 Score = 61.2 bits (147), Expect = 4e-07
 Identities = 28/43 (65%), Positives = 34/43 (79%)
 Frame = -3

Query: 501 FQHISAGIEEILADYVHQGMTRKWILIFLEPALLIAAKDLFVS 373
           F HI+ GIEEI+ADYVHQ MTR WIL++L   LLI  KD+F+S
Sbjct: 50  FWHINEGIEEIMADYVHQEMTRNWILVYLRLFLLIVIKDVFLS 92


>gb|ABD24439.1| succinate dehydrogenase subunit 4 [Salix gilgiana]
          Length = 100

 Score = 61.2 bits (147), Expect = 4e-07
 Identities = 28/43 (65%), Positives = 34/43 (79%)
 Frame = -3

Query: 501 FQHISAGIEEILADYVHQGMTRKWILIFLEPALLIAAKDLFVS 373
           F HI+ GIEEI+ADYVHQ MTR WIL++L   LLI  KD+F+S
Sbjct: 50  FWHINEGIEEIMADYVHQEMTRNWILVYLRLFLLIVIKDVFLS 92


>ref|YP_003587375.1| succinate dehydrogenase subunit 4 [Cucurbita pepo]
           gi|259156838|gb|ACV96699.1| succinate dehydrogenase
           subunit 4 [Cucurbita pepo]
          Length = 128

 Score = 60.1 bits (144), Expect = 9e-07
 Identities = 27/43 (62%), Positives = 35/43 (81%)
 Frame = -3

Query: 501 FQHISAGIEEILADYVHQGMTRKWILIFLEPALLIAAKDLFVS 373
           F HI++GIEEI+AD+VHQ MTR WIL++L   LLI  KD+F+S
Sbjct: 73  FWHINSGIEEIMADHVHQEMTRNWILVYLRLFLLIVIKDVFLS 115


>ref|YP_004849351.1| succinate dehydrogenase subunit 4 [Cucumis sativus]
           gi|325305609|gb|ADZ10778.1| succinate dehydrogenase
           subunit 4 [Cucumis sativus]
          Length = 144

 Score = 59.7 bits (143), Expect = 1e-06
 Identities = 27/43 (62%), Positives = 35/43 (81%)
 Frame = -3

Query: 501 FQHISAGIEEILADYVHQGMTRKWILIFLEPALLIAAKDLFVS 373
           F HI++GIEEI+AD+VHQ MTR WIL++L   L I+ KDLF+S
Sbjct: 73  FWHINSGIEEIMADHVHQEMTRNWILVYLRFFLFISIKDLFLS 115


>ref|YP_173457.1| hypothetical protein NitaMp119 [Nicotiana tabacum]
          Length = 125

 Score = 59.3 bits (142), Expect = 1e-06
 Identities = 27/43 (62%), Positives = 34/43 (79%)
 Frame = -3

Query: 501 FQHISAGIEEILADYVHQGMTRKWILIFLEPALLIAAKDLFVS 373
           F HI+ GIEEI+AD+VHQ MTR WIL++L   LLI  KD+F+S
Sbjct: 73  FWHINEGIEEIMADHVHQEMTRNWILVYLRLFLLIVIKDVFLS 115


>ref|XP_006345724.1| PREDICTED: uncharacterized mitochondrial protein ymf17-like
           [Solanum tuberosum]
          Length = 137

 Score = 59.3 bits (142), Expect = 1e-06
 Identities = 30/59 (50%), Positives = 43/59 (72%)
 Frame = -3

Query: 501 FQHISAGIEEILADYVHQGMTRKWILIFLEPALLIAAKDLFVSSL**MT*KKEKYLLPK 325
           F HI+ G+EEI+AD+VHQ MTR WIL++L   LLI  KD+F+S +  +  KK+K L+ +
Sbjct: 73  FWHINEGVEEIMADHVHQEMTRNWILVYLRLFLLIVIKDVFLSLVSFL--KKKKNLMDR 129


>ref|YP_008802494.1| succinate dehydrogenase subunit 4 (mitochondrion) [Asclepias
           syriaca] gi|556562333|gb|AGZ63029.1| succinate
           dehydrogenase subunit 4 (mitochondrion) [Asclepias
           syriaca]
          Length = 143

 Score = 59.3 bits (142), Expect = 1e-06
 Identities = 28/48 (58%), Positives = 37/48 (77%)
 Frame = -3

Query: 516 LGILTFQHISAGIEEILADYVHQGMTRKWILIFLEPALLIAAKDLFVS 373
           L +  F HI++GIEEI+ADYVHQ MTR +IL++L   LLI  KD+F+S
Sbjct: 66  LNLSLFWHINSGIEEIMADYVHQEMTRNFILVYLRLFLLIVIKDVFLS 113


>gb|AAW47287.1| succinate oxido-reductase subunit 4 [Eschscholzia californica]
          Length = 108

 Score = 59.3 bits (142), Expect = 1e-06
 Identities = 27/43 (62%), Positives = 34/43 (79%)
 Frame = -3

Query: 501 FQHISAGIEEILADYVHQGMTRKWILIFLEPALLIAAKDLFVS 373
           F HI+ GIEEI+AD+VHQ MTR WIL++L   LLI  KD+F+S
Sbjct: 50  FWHINEGIEEIMADHVHQEMTRNWILVYLRLFLLIVIKDVFLS 92


>gb|AAW47281.1| succinate oxido-reductase subunit 4 [Platanus occidentalis]
          Length = 119

 Score = 59.3 bits (142), Expect = 1e-06
 Identities = 27/43 (62%), Positives = 34/43 (79%)
 Frame = -3

Query: 501 FQHISAGIEEILADYVHQGMTRKWILIFLEPALLIAAKDLFVS 373
           F HI+ GIEEI+AD+VHQ MTR WIL++L   LLI  KD+F+S
Sbjct: 50  FWHINEGIEEIMADHVHQEMTRNWILVYLRLFLLIVIKDVFLS 92


>ref|YP_003587239.1| succinate dehydrogenase subunit 4 [Citrullus lanatus]
           gi|259156796|gb|ACV96658.1| succinate dehydrogenase
           subunit 4 [Citrullus lanatus]
          Length = 135

 Score = 59.3 bits (142), Expect = 1e-06
 Identities = 27/43 (62%), Positives = 34/43 (79%)
 Frame = -3

Query: 501 FQHISAGIEEILADYVHQGMTRKWILIFLEPALLIAAKDLFVS 373
           F HI+ GIEEI+AD+VHQ MTR WIL++L   LLI  KD+F+S
Sbjct: 73  FWHINEGIEEIMADHVHQEMTRNWILVYLRLFLLIVIKDVFLS 115


>ref|YP_002608211.1| succinate dehydrogenase subunit 4 [Carica papaya]
           gi|170522390|gb|ACB20500.1| succinate dehydrogenase
           subunit 4, partial (mitochondrion) [Carica papaya]
          Length = 136

 Score = 59.3 bits (142), Expect = 1e-06
 Identities = 27/43 (62%), Positives = 34/43 (79%)
 Frame = -3

Query: 501 FQHISAGIEEILADYVHQGMTRKWILIFLEPALLIAAKDLFVS 373
           F HI+ GIEEI+AD+VHQ MTR WIL++L   LLI  KD+F+S
Sbjct: 73  FWHINEGIEEIMADHVHQEMTRNWILVYLRLFLLIVIKDVFLS 115


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