BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra27_contig00025949
         (647 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004485976.1| PREDICTED: pentatricopeptide repeat-containi...    57   5e-06
ref|XP_002442546.1| hypothetical protein SORBIDRAFT_08g021630 [S...    57   5e-06
tpg|DAA54699.1| TPA: hypothetical protein ZEAMMB73_211194, parti...    57   6e-06
ref|XP_004963213.1| PREDICTED: pentatricopeptide repeat-containi...    56   8e-06

>ref|XP_004485976.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04760,
           chloroplastic-like [Cicer arietinum]
          Length = 784

 Score = 57.0 bits (136), Expect = 5e-06
 Identities = 48/165 (29%), Positives = 75/165 (45%), Gaps = 1/165 (0%)
 Frame = +3

Query: 153 SAENPNTNTHKPNPSTLGEFRGSCLRRPRRHKVEHKKAVDREIKGARKLFESRNKGEQVN 332
           S+ N N N H+ N           + R    + E +  + RE+     L  + N   + N
Sbjct: 96  SSSNCNNNKHREN-----------IARFEIDESEFRHPLVREVCRLITLRSTWNPKFEGN 144

Query: 333 KREVKMALQRLNSSHICAALRAHKRDAKVAFQFLEWYMGNTTGKVDTCVFQCMLDILSTT 512
            R +   L+ L    +CA LR+   D ++A  F  W       + DT V+  MLDILS T
Sbjct: 145 LRHL---LRSLKPPLVCAVLRSQV-DERIALSFFYWADRQWRYRHDTIVYYTMLDILSKT 200

Query: 513 EMWVTARSMLEVLIRRN-SCGVHDFNRYMVCLHRAGRVRKSMRTL 644
           ++   AR +L ++ RR   C    F   MV   RAG++R +++ L
Sbjct: 201 KLCQGARRILRLMTRRGIECTPEAFGYVMVSYSRAGKLRNALQLL 245


>ref|XP_002442546.1| hypothetical protein SORBIDRAFT_08g021630 [Sorghum bicolor]
           gi|241943239|gb|EES16384.1| hypothetical protein
           SORBIDRAFT_08g021630 [Sorghum bicolor]
          Length = 735

 Score = 57.0 bits (136), Expect = 5e-06
 Identities = 39/126 (30%), Positives = 64/126 (50%), Gaps = 2/126 (1%)
 Frame = +3

Query: 273 REIKGARKLFESRNKGEQVNKREVKMALQRLNSSHICAALRAH-KRDAKVAFQFLEWYMG 449
           R ++   +L E R+      + +++  L+ +  S + A LRA  +RDA+ AF+F  W   
Sbjct: 59  RLVRDTCRLLELRDSWSAKLEAQLRHLLRAMTPSQVRAVLRAQAQRDARAAFEFFRWADR 118

Query: 450 NTTGKVDTCVFQCMLDILSTTEMWVTARSMLEVLIRRN-SCGVHDFNRYMVCLHRAGRVR 626
               +    VF  ML +LS T +   AR ++ ++IRR    G   F   M+   RAG++R
Sbjct: 119 QWKYRHAPEVFDEMLVLLSRTRLHDPARRVMRLMIRRGMPRGTRQFAHLMLSYSRAGKLR 178

Query: 627 KSMRTL 644
            +MR L
Sbjct: 179 SAMRVL 184


>tpg|DAA54699.1| TPA: hypothetical protein ZEAMMB73_211194, partial [Zea mays]
          Length = 709

 Score = 56.6 bits (135), Expect = 6e-06
 Identities = 39/124 (31%), Positives = 63/124 (50%), Gaps = 2/124 (1%)
 Frame = +3

Query: 279 IKGARKLFESRNKGEQVNKREVKMALQRLNSSHICAALRAH-KRDAKVAFQFLEWYMGNT 455
           ++   +L E R+      + +++  L+ L  S + A LRA  +RDA+ AF+F  W     
Sbjct: 63  VRDTCRLLELRDSWSAKLEAQLRHFLRALTPSQVRAVLRAQAQRDARAAFEFFRWADRQW 122

Query: 456 TGKVDTCVFQCMLDILSTTEMWVTARSMLEVLIRRN-SCGVHDFNRYMVCLHRAGRVRKS 632
             +    VF  ML +LS T +   AR ++ ++IRR    G   F   M+   RAG++R +
Sbjct: 123 KYRHAPEVFDEMLALLSRTRLHDPARRVVRLMIRRGIRRGTRQFAHLMLSYSRAGKLRSA 182

Query: 633 MRTL 644
           MR L
Sbjct: 183 MRVL 186


>ref|XP_004963213.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g39710-like [Setaria italica]
          Length = 722

 Score = 56.2 bits (134), Expect = 8e-06
 Identities = 39/126 (30%), Positives = 64/126 (50%), Gaps = 2/126 (1%)
 Frame = +3

Query: 273 REIKGARKLFESRNKGEQVNKREVKMALQRLNSSHICAALRAH-KRDAKVAFQFLEWYMG 449
           R ++   +L E R+      + +++  L+ L+   + A LRA  +RDA+ AF+F  W   
Sbjct: 60  RLVQDICRLLELRDSWSAKREAQLRHLLRVLSPPQVRAVLRAQAQRDARAAFEFFRWADR 119

Query: 450 NTTGKVDTCVFQCMLDILSTTEMWVTARSMLEVLIRRN-SCGVHDFNRYMVCLHRAGRVR 626
               +    VF  ML +LS T +   AR ++ ++IRR    G   F   M+   RAG++R
Sbjct: 120 QWKYRHAPEVFDEMLALLSRTRLHDPARRVMRLMIRRGMRRGTQQFAHLMLTYSRAGKLR 179

Query: 627 KSMRTL 644
            +MR L
Sbjct: 180 SAMRVL 185