BLASTX nr result

ID: Ephedra27_contig00025767 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra27_contig00025767
         (1376 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002879887.1| hypothetical protein ARALYDRAFT_903365 [Arab...    59   4e-06

>ref|XP_002879887.1| hypothetical protein ARALYDRAFT_903365 [Arabidopsis lyrata subsp.
            lyrata] gi|297325726|gb|EFH56146.1| hypothetical protein
            ARALYDRAFT_903365 [Arabidopsis lyrata subsp. lyrata]
          Length = 1359

 Score = 59.3 bits (142), Expect = 4e-06
 Identities = 49/211 (23%), Positives = 103/211 (48%), Gaps = 4/211 (1%)
 Frame = -2

Query: 1318 RFKKMEEEEEG-DRLSALPDAILTQILALTNSYKTPAICSTLSTRWRKLYTLVPSMYFSP 1142
            + K+  +  EG D +S++PD IL  IL+L  + +     S LS RWR +++ +PS+YF  
Sbjct: 28   KIKEPGDSSEGLDSISSMPDVILQVILSLIPT-RFAIRTSVLSRRWRHVWSYIPSLYFHK 86

Query: 1141 DDIWGRIHHSAASVYAVRFRHIVSTALFRRRDEIQTLRV---KLLDRQCLSSWLQYCASL 971
            D         A S+     R+        +  ++ + R+   +L +   + SW+++  S 
Sbjct: 87   D------RPDANSINETLARY--------KAPKMMSFRICTSELDNLPNMDSWIKFALSR 132

Query: 970  NVKNLQIDEHFIFAKIKSYHANFVPENDDIDDINMHRLLFGDIVFTKSSQFTLSFLVSVR 791
            NV+NL +   ++  +       F+  N  + ++ +  + + +I+   S  +T    +S+ 
Sbjct: 133  NVENLSL---YLERRSDYNIPEFLYVNSSVKNLCIESIFYSNIIPKCSVSWTSLKNMSL- 188

Query: 790  LHWVFSLNAKWVSRLIQWSPVLRELSLSFCE 698
              W   L+ + +++++   P+L  L+L FC+
Sbjct: 189  --WCCKLSDESIAKILFGCPILESLTLCFCK 217


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