BLASTX nr result

ID: Ephedra26_contig00019280 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra26_contig00019280
         (996 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EMS54795.1| hypothetical protein TRIUR3_05584 [Triticum urartu]     63   2e-07

>gb|EMS54795.1| hypothetical protein TRIUR3_05584 [Triticum urartu]
          Length = 1501

 Score = 62.8 bits (151), Expect = 2e-07
 Identities = 55/224 (24%), Positives = 87/224 (38%), Gaps = 9/224 (4%)
 Frame = +3

Query: 102 DCSHPPCTYHYGNGHVPPSLYHWPSEGWNGYYSRPQQH-CIPYDHTAYHYYSRPTFHEYY 278
           DCS  PC   YG          WP  G   +   P+ H C  + +   +Y  RP F +  
Sbjct: 33  DCS--PCRPPYGP---------WPYSGSMNHSGLPESHSCCSHTYPPGYYSFRPPFPQEL 81

Query: 279 DPPNSQFH--YPPMNI-PYI--HYGYRPVHPAEQFRXXXXXXXXXXXXXXXXSELHYPQK 443
            PP   +H  +PP +  PY   ++G  P +P +Q                        + 
Sbjct: 82  PPPYPYYHGPFPPHHPNPYSSSYFGPFPPYPVDQTAYNGLYDKF--------------KS 127

Query: 444 HCCGCPNHVCHSGPLHPEEKNQVAVKNNRPTIVDDEGARDMVKNGSECGKKVQQISPGIW 623
           HCCGCPNHVCH       +K+ V ++ + P + DD   +D   + S   +      P +W
Sbjct: 128 HCCGCPNHVCHG---DGGQKSNVKIEEHVPEVKDDSKHKD--ADNSRIIRNPNYQYPVMW 182

Query: 624 FMPYDGQTPRIESQKKKDESPTY---WIPLKDADSSNAKSGVDS 746
            +P   +  +  +    +  P +   W P     + + K   DS
Sbjct: 183 -LPSGDKKDKANNGTSFEFPPQFFSKWFPQSGERTEDVKPADDS 225


Top