BLASTX nr result

ID: Ephedra25_contig00029079 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra25_contig00029079
         (464 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002324010.2| hypothetical protein POPTR_0017s10890g [Popu...    62   8e-08

>ref|XP_002324010.2| hypothetical protein POPTR_0017s10890g [Populus trichocarpa]
           gi|550320000|gb|EEF04143.2| hypothetical protein
           POPTR_0017s10890g [Populus trichocarpa]
          Length = 2184

 Score = 62.0 bits (149), Expect = 8e-08
 Identities = 42/137 (30%), Positives = 66/137 (48%), Gaps = 1/137 (0%)
 Frame = +3

Query: 57  SNMNKTVQQLGKDSDSLKVQESSNLENVVNGFASDGDLKTDQSNHKTKESDEKHFSSPSF 236
           SN+ K  Q  G +S        SNL     G  SD  ++  Q+   + E      +  SF
Sbjct: 139 SNLRKHTQSQGDNSFGAPPLTYSNLFYTGYGLLSDV-MRPMQTADTSAEG-----AGMSF 192

Query: 237 PKEQQQDRENMEAKT-SKTPEDEYIDRLREFIAQKNGVLVKGWKAELRRRQNGHDTDVIY 413
           P+   + R N   +  S+ P + ++  LREFI++++GVL +GW  E +   + +D   +Y
Sbjct: 193 PQGSLRSRNNTTIRLLSRNPSEIFLQGLREFISERHGVLEEGWSVEFKHSISNYDLYAVY 252

Query: 414 ISPEGYKLRSRLEVARH 464
            SP+G    S  EVA H
Sbjct: 253 CSPDGKTFHSMSEVACH 269


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