BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra25_contig00028902
         (482 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EFA05312.1| hypothetical protein TcasGA2_TC015470 [Tribolium ...    74   2e-11
ref|XP_002064813.1| GK15001 [Drosophila willistoni] gi|194160898...    70   2e-10
gb|ADN33807.1| ty1-copia retrotransposon protein [Cucumis melo s...    68   1e-09
gb|ADJ18449.1| gag/pol protein [Bryonia dioica]                        66   5e-09
gb|ACI62137.1| polyprotein [Drosophila melanogaster]                   65   1e-08
emb|CAN65627.1| hypothetical protein VITISV_032735 [Vitis vinifera]    62   6e-08
gb|AAD17409.1| putative retroelement pol polyprotein [Arabidopsi...    60   2e-07
gb|AAK13113.1|AC080019_5 Putative retroelement pol polyprotein [...    60   3e-07
emb|CAN67902.1| hypothetical protein VITISV_037907 [Vitis vinifera]    60   3e-07
gb|ABB47448.2| retrotransposon protein, putative, Ty1-copia subc...    60   3e-07
emb|CAC95126.1| gag-pol polyprotein [Populus deltoides]                60   3e-07
emb|CAN61630.1| hypothetical protein VITISV_003191 [Vitis vinifera]    60   4e-07
gb|EXB35423.1| Retrovirus-related Pol polyprotein from transposo...    59   5e-07
emb|CAN77149.1| hypothetical protein VITISV_019364 [Vitis vinifera]    59   5e-07
gb|AGW47867.1| polyprotein [Phaseolus vulgaris]                        59   7e-07
gb|AGV40508.1| hypothetical protein [Phaseolus vulgaris]               58   1e-06
gb|AAC26250.1| contains similarity to reverse transcriptase (Pfa...    58   1e-06
gb|AAO73527.1| gag-pol polyprotein [Glycine max]                       58   1e-06
gb|AAV59370.1| hypothetical protein [Oryza sativa Japonica Group]      58   1e-06
gb|AAO73521.1| gag-pol polyprotein [Glycine max]                       58   1e-06

>gb|EFA05312.1| hypothetical protein TcasGA2_TC015470 [Tribolium castaneum]
          Length = 2375

 Score = 74.3 bits (181), Expect = 2e-11
 Identities = 51/167 (30%), Positives = 84/167 (50%), Gaps = 13/167 (7%)
 Frame = -3

Query: 465 LKDALYVEGLRKNMIFLYKVLKQQYNLIAFQKKTGGTCCRILQNNRIIAKGTKQNGLF-V 289
           +K+ LYV+ L+ N++ + K+     N+     K       I +N++++A+G + + L+ +
Sbjct: 329 IKNVLYVKNLKHNLLSVQKIELASLNVSFEHGKVV-----IKRNSKVLAEGKRIDNLYEI 383

Query: 288 MKPVETKCYL------RDMETINLWHNRLGHINNAYLRKIEGAVSHGPKNLTVAKCYNSY 127
              VE KC +          ++ LWH RLGH++N  L  +         N+  + C  S 
Sbjct: 384 CFEVENKCKVVCSNVCEVSASLKLWHRRLGHLSNKNLVTLSKNNMVSGLNIRNSNCNESQ 443

Query: 126 IT-----IKLHKSPF-KQKTQVTRQCLEIIHSGLCGPISPSTSQGRR 4
           I       K+ K PF K+    T + LE+IHS LCGPI+P T  G+R
Sbjct: 444 ICEVCVKSKITKLPFGKRSDNKTTRVLELIHSDLCGPITPETHDGKR 490


>ref|XP_002064813.1| GK15001 [Drosophila willistoni] gi|194160898|gb|EDW75799.1| GK15001
           [Drosophila willistoni]
          Length = 1249

 Score = 70.5 bits (171), Expect = 2e-10
 Identities = 47/165 (28%), Positives = 78/165 (47%), Gaps = 8/165 (4%)
 Frame = -3

Query: 474 KIILKDALYVEGLRKNMIFLYKVLKQQYNLIAFQKKTGGTCCRILQNNRIIAKGTKQNGL 295
           K+ + + LYV GL  N + + +V+  +YN +   +K      +I+QN   I K  K   L
Sbjct: 320 KLTMNNVLYVPGLAGNFMSVARVI--EYNSVVHFEKH---MAKIIQNGECILKAKKIGNL 374

Query: 294 FVMKPVETKCYLRDMETINLWHNRLGHINNAYLRKIEG-------AVSHGPKNLTVAKCY 136
           FV +      +    E ++LWH R GH+N   L +I         +V++   N     C 
Sbjct: 375 FVFEAESENLFAAVGEDVSLWHKRFGHLNYKSLTQIASKGLVRGLSVTNFAPNTPCKTCM 434

Query: 135 NSYITIKLHKSPFKQKTQV-TRQCLEIIHSGLCGPISPSTSQGRR 4
            S    K+H  PF + T+  + + L+++HS +CGP    +  G R
Sbjct: 435 VS----KIHVQPFPKMTESRSSELLQLVHSDVCGPFGTKSLGGSR 475


>gb|ADN33807.1| ty1-copia retrotransposon protein [Cucumis melo subsp. melo]
          Length = 1038

 Score = 68.2 bits (165), Expect = 1e-09
 Identities = 52/166 (31%), Positives = 78/166 (46%), Gaps = 7/166 (4%)
 Frame = -3

Query: 477 KKIILKDALYVEGLRKNMIFLYKVLKQQYNLIAFQKKTGGTCCRILQNNRIIAKGTKQNG 298
           K + L + LYV  LR+N+     V     N    +    G    + +N   + KG   NG
Sbjct: 388 KTLSLSNVLYVPSLRRNL-----VSGSLLNRAGLKIVLEGDKVVLTKNGNFVGKGYLSNG 442

Query: 297 LFVMKPVE------TKCYLRDMETINLWHNRLGHINNAYLRKIEG-AVSHGPKNLTVAKC 139
           LFV+  +       +  YL  +E+ NLWH RLGH+N A +RK++   + +  +     KC
Sbjct: 443 LFVLNTISMNANASSSAYL--IESANLWHGRLGHVNFASIRKLKDMRLINTSETHETGKC 500

Query: 138 YNSYITIKLHKSPFKQKTQVTRQCLEIIHSGLCGPISPSTSQGRRN 1
               I  K HK PFK     T + LE+I+S L      + S+G +N
Sbjct: 501 -PVCIESKFHKKPFKPVEYRTTELLELIYSDL-ADFRTTASRGGKN 544


>gb|ADJ18449.1| gag/pol protein [Bryonia dioica]
          Length = 1292

 Score = 65.9 bits (159), Expect = 5e-09
 Identities = 50/170 (29%), Positives = 83/170 (48%), Gaps = 16/170 (9%)
 Frame = -3

Query: 471 IILKDALYVEGLRKNMIFLYKVLKQQYNLIAFQKKTGGTCCRILQNNRIIAKGTKQNGLF 292
           +ILKD LYV  +++N+I +  +L+  Y  I+F+       C+ +Q    I    ++N L+
Sbjct: 356 LILKDVLYVPLMKRNLISIACILEHIYT-ISFEVNEVFILCKGIQ----ICSAIRENNLY 410

Query: 291 VMKPVETKCYL-----RDMETIN----------LWHNRLGHIN-NAYLRKIEGAVSHGPK 160
            ++P      L     R +ET N          LWH RLGHIN N   R ++  + +  +
Sbjct: 411 KLRPTRANVVLNTEMFRTLETQNKKQKVSSNAYLWHLRLGHINLNRIERLVKSGILNQLE 470

Query: 159 NLTVAKCYNSYITIKLHKSPFKQKTQVTRQCLEIIHSGLCGPISPSTSQG 10
           + ++  C  S +  K+ K  F  K    +  LE++HS LCGP++     G
Sbjct: 471 DNSLPPC-ESCLEGKMTKRSFTGKGLRAKVPLELVHSDLCGPMNVKARGG 519


>gb|ACI62137.1| polyprotein [Drosophila melanogaster]
          Length = 1319

 Score = 64.7 bits (156), Expect = 1e-08
 Identities = 48/168 (28%), Positives = 81/168 (48%), Gaps = 12/168 (7%)
 Frame = -3

Query: 471 IILKDALYVEGLRKNMIFLYKVLKQQYNLIAFQKKT-------GGTCCRILQ-NNRIIAK 316
           I L+D +YV  L  N + + K  + + N+  F KK        G    R +Q +N  +  
Sbjct: 325 IELRDVIYVPSLHMNFLSVSKSAEYE-NITTFDKKAAVIKNKQGEVMMRAMQEDNLYLFT 383

Query: 315 GTKQNGLFVMKPVETKCYLRDMETINLWHNRLGHINNAYLRKI---EGAVSHGPKNLTVA 145
            + +NG   +        L D   +  WHNR GH+N   L++I   E  +    KN++V 
Sbjct: 384 SSSKNGAVHL--------LNDSSRMATWHNRFGHLNFQCLKEIKEKELVIGMDFKNMSVN 435

Query: 144 KCYNSYITIKLHKSPFKQKTQ-VTRQCLEIIHSGLCGPISPSTSQGRR 4
              ++    K+H  PF Q ++  T+  LE++HS +CGP++ S+  G +
Sbjct: 436 INCDTCNMAKIHVLPFPQNSERATQSVLELVHSDVCGPMNVSSLGGNK 483


>emb|CAN65627.1| hypothetical protein VITISV_032735 [Vitis vinifera]
          Length = 1285

 Score = 62.4 bits (150), Expect = 6e-08
 Identities = 49/174 (28%), Positives = 78/174 (44%), Gaps = 22/174 (12%)
 Frame = -3

Query: 465 LKDALYVEGLRKNMIFLYKVLKQQYNLIAFQKKTGGTCCRILQNNRIIAKGTKQNGLFVM 286
           LK+ LYV  +R+N+I +  + K  Y++   +        +  +  +II  G+  +GL+++
Sbjct: 319 LKNVLYVPSIRRNLISVSSLSKNGYSVCFNEFYDDSVVIKFRE--QIICSGSLIDGLYIL 376

Query: 285 K-------------------PVETKCYLRDMETINLWHNRLGHINNAYLRKIEGAVSHGP 163
           K                   P++ KC + ++    LWH RLGHIN   L +I   V  GP
Sbjct: 377 KVTPELQLTNSEVNNFDIVAPLKRKCPI-ELSYTYLWHLRLGHIN---LDRISLLVKDGP 432

Query: 162 KNLTVAKCY---NSYITIKLHKSPFKQKTQVTRQCLEIIHSGLCGPISPSTSQG 10
            +    +      S +  K+   PF  K       LE+IHS LCGP+S     G
Sbjct: 433 LSSLKVEALPTCESCLEGKMTNRPFPLKGNRANDVLELIHSDLCGPMSVQARGG 486


>gb|AAD17409.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 1347

 Score = 60.5 bits (145), Expect = 2e-07
 Identities = 46/162 (28%), Positives = 80/162 (49%), Gaps = 5/162 (3%)
 Frame = -3

Query: 474 KIILKDALYVEGLRKNMIFLYKVLKQQYNLIAFQKKTGGTCCRILQNNRIIAKGTKQNGL 295
           K I+K+   V GL KN++ + +++   Y  + FQ K    C     N + I      +  
Sbjct: 378 KRIIKNVFLVPGLEKNLLSVPQIISSGY-WVRFQDKR---CIIQDANGKEIMNIEMTDKS 433

Query: 294 FVMK--PVETKCYLRDMETINLWHNRLGHINNAYLRKIEG--AVSHGPK-NLTVAKCYNS 130
           F +K   VE +    +++T   WH RLGH++N  L++++    V+  P+  +T   C   
Sbjct: 434 FKIKLSSVEEEAMTANVQTEETWHKRLGHVSNKRLQQMQDKELVNGLPRFKVTKETCKAC 493

Query: 129 YITIKLHKSPFKQKTQVTRQCLEIIHSGLCGPISPSTSQGRR 4
            +  +  KS  K+    TR+ LEI+H+ +CGP+   +  G R
Sbjct: 494 NLGKQSRKSFPKESQTKTREKLEIVHTDVCGPMQHQSIDGSR 535


>gb|AAK13113.1|AC080019_5 Putative retroelement pol polyprotein [Oryza sativa Japonica Group]
          Length = 893

 Score = 60.1 bits (144), Expect = 3e-07
 Identities = 29/80 (36%), Positives = 48/80 (60%), Gaps = 3/80 (3%)
 Frame = -3

Query: 234 WHNRLGHINNAYLRKIE--GAVSHGPKNLTVAKCYNSYITIKLHKSPFKQKTQVTRQ-CL 64
           WH R GH+N   LR++   G V   P+   + +  + Y+  K H++PF ++ Q   Q  L
Sbjct: 429 WHARFGHLNFLALRRLAKGGVVRRIPQIDHIDQLCDGYLAGKQHRTPFPEEAQYRAQTAL 488

Query: 63  EIIHSGLCGPISPSTSQGRR 4
           E++H  LCGPI+P+T+ G++
Sbjct: 489 ELVHGDLCGPITPATTGGKK 508


>emb|CAN67902.1| hypothetical protein VITISV_037907 [Vitis vinifera]
          Length = 735

 Score = 60.1 bits (144), Expect = 3e-07
 Identities = 47/161 (29%), Positives = 76/161 (47%), Gaps = 5/161 (3%)
 Frame = -3

Query: 468 ILKDALYVEGLRKNMIFLYKVLKQQYNLIAFQKKTGGTCCRILQNNRIIAKGTKQNGLFV 289
           +L+D  Y+  L+KN+I L  + + +Y       K      R+ + + I+ KGT + GL+ 
Sbjct: 46  VLEDVRYIPELKKNLISLGMLDESRYTF-----KLEPNSLRVARGSLIVMKGTIKIGLYT 100

Query: 288 M--KPVETKCYL---RDMETINLWHNRLGHINNAYLRKIEGAVSHGPKNLTVAKCYNSYI 124
           +  + V +K       DM T  LWH RLGHI++  L+++E     G   LT        +
Sbjct: 101 LIGQTVTSKVSTMLKEDMGTTKLWHQRLGHISHRGLQELEKQGVLGNYKLTNLTFCEHCV 160

Query: 123 TIKLHKSPFKQKTQVTRQCLEIIHSGLCGPISPSTSQGRRN 1
             K  +  F +    T+  L+ IHS L  P   S+  G R+
Sbjct: 161 FGKTTRVKFAKVVHETQNQLDYIHSDLWEPSRVSSIGGARS 201


>gb|ABB47448.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 886

 Score = 60.1 bits (144), Expect = 3e-07
 Identities = 29/80 (36%), Positives = 48/80 (60%), Gaps = 3/80 (3%)
 Frame = -3

Query: 234 WHNRLGHINNAYLRKIE--GAVSHGPKNLTVAKCYNSYITIKLHKSPFKQKTQVTRQ-CL 64
           WH R GH+N   LR++   G V   P+   + +  + Y+  K H++PF ++ Q   Q  L
Sbjct: 410 WHARFGHLNFLALRRLAKGGVVRRIPQIDHIDQLCDGYLAGKQHRTPFPEEAQYRAQTAL 469

Query: 63  EIIHSGLCGPISPSTSQGRR 4
           E++H  LCGPI+P+T+ G++
Sbjct: 470 ELVHGDLCGPITPATTGGKK 489


>emb|CAC95126.1| gag-pol polyprotein [Populus deltoides]
          Length = 1382

 Score = 60.1 bits (144), Expect = 3e-07
 Identities = 44/169 (26%), Positives = 79/169 (46%), Gaps = 15/169 (8%)
 Frame = -3

Query: 465 LKDALYVEGLRKNMIFLYKVLKQQYNLIAFQKKTGGTCC-RILQNNRIIAKGTKQNGLFV 289
           L +   +  L+ N+  + ++      L+ F   +G  CC + LQ+ ++I  G ++NGL++
Sbjct: 393 LPNVYLIPKLKLNLASIGQICDSGDYLVMF---SGSFCCVQDLQSQKLIGTGRRENGLYI 449

Query: 288 MK----PVETKCYLRDME---------TINLWHNRLGHINNAYLRKIEGAVSHGP-KNLT 151
           +     PV       D+          +  LWH+RLGH++++ LR +    + G  K   
Sbjct: 450 LDELKVPVVVAATTVDLSFFRLSLSSSSFYLWHSRLGHVSSSRLRFLASTGALGNLKTCD 509

Query: 150 VAKCYNSYITIKLHKSPFKQKTQVTRQCLEIIHSGLCGPISPSTSQGRR 4
           ++ C    +  K    PF + T V+    ++IHS + GP   ST  G R
Sbjct: 510 ISDCSGCKLA-KFSALPFNRSTSVSSSPFDLIHSDVWGPSPVSTKGGSR 557


>emb|CAN61630.1| hypothetical protein VITISV_003191 [Vitis vinifera]
          Length = 1208

 Score = 59.7 bits (143), Expect = 4e-07
 Identities = 46/160 (28%), Positives = 74/160 (46%), Gaps = 5/160 (3%)
 Frame = -3

Query: 468 ILKDALYVEGLRKNMIFLYKVLKQQYNLIAFQKKTGGTCCRILQNNRIIAKGTKQNGLFV 289
           +L+D  Y+  L++N+I L  + K  Y       K+     R+ + +  + KGT +NGL+ 
Sbjct: 316 VLEDVRYIPELKRNLISLGMLDKSGYTF-----KSEPNSLRVARGSLTVMKGTIKNGLYT 370

Query: 288 M--KPVETKCYL---RDMETINLWHNRLGHINNAYLRKIEGAVSHGPKNLTVAKCYNSYI 124
           +  + V  K       D+ T  LWH RLGHI++  L+++E     G   LT        +
Sbjct: 371 LIGQTVTGKVSTVLKEDVGTTKLWHQRLGHISHRGLQELEKQGVLGNYKLTDLPFCEHCV 430

Query: 123 TIKLHKSPFKQKTQVTRQCLEIIHSGLCGPISPSTSQGRR 4
             K  +  F +    T+  L+ IHS L GP    +  G R
Sbjct: 431 FGKATRVKFAKAIHETQNQLDYIHSDLWGPSRVPSIGGAR 470


>gb|EXB35423.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Morus
           notabilis]
          Length = 443

 Score = 59.3 bits (142), Expect = 5e-07
 Identities = 46/175 (26%), Positives = 78/175 (44%), Gaps = 19/175 (10%)
 Frame = -3

Query: 477 KKIILKDALYVEGLRKNMIFLYKVLKQQYNLIAFQKKTGGTCCRILQNNRIIAKGTKQNG 298
           K ++L +  ++  +R+N+I + K+ +Q + +             I +N   I  G   +G
Sbjct: 259 KFLVLNNVYFIPDIRRNLISMSKLFEQFFKVYFVNDFV-----HISRNGLNIYSGRLDDG 313

Query: 297 LFVMKPVETKCYLRDMETIN----------------LWHNRLGHINNAYLRKIEGAVSHG 166
           L+ +KP+       +M  +                 LWH  LGHIN   L +IE  V  G
Sbjct: 314 LYCIKPIPNSLLNTEMFRVAEPKNKKQKISHENNTYLWHLGLGHIN---LNRIERLVKDG 370

Query: 165 P-KNLTVAKCY--NSYITIKLHKSPFKQKTQVTRQCLEIIHSGLCGPISPSTSQG 10
           P + LTV +     S +  K+ K PF  K ++  + L+ IH  +CGP++     G
Sbjct: 371 PLRELTVGELLVCRSCLEGKMTKRPFTAKGKIATKPLQPIHLDVCGPLNVQARGG 425


>emb|CAN77149.1| hypothetical protein VITISV_019364 [Vitis vinifera]
          Length = 1544

 Score = 59.3 bits (142), Expect = 5e-07
 Identities = 49/176 (27%), Positives = 79/176 (44%), Gaps = 20/176 (11%)
 Frame = -3

Query: 477  KKIILKDALYVEGLRKNMIFLYKVLKQQYNL---------IAFQKKTGGTCCRILQNNRI 325
            + + LK+ LYV  +R+N+I +  + K  Y++         +  + +    C   L ++  
Sbjct: 667  RTLFLKNVLYVPSIRRNLIPISSLSKNGYSVCFNEFYDDSVVIKFREQMICSGSLIDSLY 726

Query: 324  IAKGTKQ--------NGLFVMKPVETKCYLRDMETINLWHNRLGHINNAYLRKIEGAVSH 169
            I K T +        N   ++ P++ K  + ++    LWH RLGHIN   L +I   V  
Sbjct: 727  ILKVTPELQLTNSEVNNFDIVAPLKRKRPI-ELSYTYLWHLRLGHIN---LDRISLLVKD 782

Query: 168  GPKNLTVAKCY---NSYITIKLHKSPFKQKTQVTRQCLEIIHSGLCGPISPSTSQG 10
            GP +    +      S +  K+ K PF  K       LE+IHS LCGP+S     G
Sbjct: 783  GPLSSLKVEALPTCESCLEGKMTKRPFPLKGNRANDVLELIHSDLCGPMSVQARGG 838


>gb|AGW47867.1| polyprotein [Phaseolus vulgaris]
          Length = 1471

 Score = 58.9 bits (141), Expect = 7e-07
 Identities = 44/165 (26%), Positives = 86/165 (52%), Gaps = 11/165 (6%)
 Frame = -3

Query: 465 LKDALYVEGLRKNMIFLYKVLKQQYNL------IAFQKKTGGTCCRI-LQNNRIIAKGTK 307
           L+D  YV  L+ N++ + ++ ++ Y++      +  + K G    RI +  NR+     K
Sbjct: 412 LQDVYYVPDLKTNILSMGQLTEKGYSIFLKDRFLHLKNKQGCLVARIEMARNRMY----K 467

Query: 306 QNGLFVMKPVETKCYLRDMET-INLWHNRLGHINNAYLRKI-EGAVSHGPKNLTVAKCYN 133
            N    ++ +  KC   ++E   +LWH R GH+++  L+++ +  + HG  N+     + 
Sbjct: 468 LN----LRSIREKCLQVNIEDKASLWHLRFGHLHHGGLKELAKKNMVHGLPNMDYEGKFC 523

Query: 132 SYITIKLH-KSPFKQKTQV-TRQCLEIIHSGLCGPISPSTSQGRR 4
               +  H ++ F +K Q   +Q LE+IH+ +CGPI+P +  G+R
Sbjct: 524 EECVLSKHVRTSFPKKAQYWAKQPLELIHTDICGPITPESFSGKR 568


>gb|AGV40508.1| hypothetical protein [Phaseolus vulgaris]
          Length = 1121

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 42/168 (25%), Positives = 76/168 (45%), Gaps = 10/168 (5%)
 Frame = -3

Query: 477 KKIILKDALYVEGLRKNMIFLYKVLKQQYNLIAFQKKTGGTCCRIL--QNNRIIAKGTKQ 304
           K + L D L+V  + KN++ + K  +    +  F   +    C +L  +  R++ +G  +
Sbjct: 272 KPLFLTDLLHVPSITKNLLSVSKFCRDNNVIFEFHSNS----CYVLDQETKRVLLQGYLK 327

Query: 303 NGLFVMKPVET--KCYLRDME------TINLWHNRLGHINNAYLRKIEGAVSHGPKNLTV 148
           + L++   + +   C +  M       ++N WH R GH +   L+KI  +      N  +
Sbjct: 328 DSLYIFSDLHSLSSCSVHSMSFIAEPISVNQWHERFGHCSFNILKKILASCDIFVSN-NI 386

Query: 147 AKCYNSYITIKLHKSPFKQKTQVTRQCLEIIHSGLCGPISPSTSQGRR 4
             C +S +  K H+ PF   T    Q L +I++ + GP S   S G R
Sbjct: 387 VFC-SSCVRGKCHQLPFYNSTHTYSQPLRLIYTDVWGPTSVLVSNGAR 433


>gb|AAC26250.1| contains similarity to reverse transcriptase (Pfam: rvt.hmm, score
           19.29) [Arabidopsis thaliana] gi|7267136|emb|CAB80804.1|
           putative retrotransposon protein [Arabidopsis thaliana]
          Length = 964

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 44/158 (27%), Positives = 72/158 (45%), Gaps = 10/158 (6%)
 Frame = -3

Query: 465 LKDALYVEGLRKNMIFLYKVLKQQYNLIAFQKKTGGTCCRILQNNRIIAKGTKQNGLFVM 286
           LK+  YV  + KN+I +  +     ++  F       CC   +++         NGL V+
Sbjct: 5   LKNCYYVPAINKNIISVSCL-----DMEGFHFSIKNKCCSFDRDDMFYGSAPLDNGLHVL 59

Query: 285 KP------VETKCYL-RDMETINLWHNRLGHINNAYLRKIEGAVSHGPKNLTVAKCY--- 136
                   + TK +   D+    LWH RLGHIN  +++K+    S G  N    + Y   
Sbjct: 60  NQSMPIYNIRTKKFKSNDLNPTFLWHCRLGHINEKHIQKLH---SDGLLNSFDYESYETC 116

Query: 135 NSYITIKLHKSPFKQKTQVTRQCLEIIHSGLCGPISPS 22
            S +  K+ K+PF   ++     L +IH+ +CGP+S S
Sbjct: 117 ESCLLGKMTKAPFTGHSERASDLLGLIHTDVCGPMSTS 154


>gb|AAO73527.1| gag-pol polyprotein [Glycine max]
          Length = 1576

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 43/164 (26%), Positives = 80/164 (48%), Gaps = 10/164 (6%)
 Frame = -3

Query: 465  LKDALYVEGLRKNMIFLYKVLKQQYNLIAFQKKTGGTCCRILQNNRIIAKGTK-QNGLFV 289
            L   L V+GL  N+I + ++  + +N+      T   C    + + ++ KG++ ++  ++
Sbjct: 614  LNKVLLVKGLTANLISISQLCDEGFNV----NFTKSECLVTNEKSEVLMKGSRSKDNCYL 669

Query: 288  MKPVETK----CYLRDMETINLWHNRLGHINNAYLRKI--EGAVSHGPKNLTVAK---CY 136
              P ET     C     + + +WH R GH++   ++KI  +GAV  G  NL + +   C 
Sbjct: 670  WTPQETSYSSTCLSSKEDEVRIWHQRFGHLHLRGMKKIIDKGAV-RGIPNLKIEEGRICG 728

Query: 135  NSYITIKLHKSPFKQKTQVTRQCLEIIHSGLCGPISPSTSQGRR 4
               I  ++  S  K + Q T + LE++H  L GP+   +  G+R
Sbjct: 729  ECQIGKQVKMSHQKLRHQTTSRVLELLHMDLMGPMQVESLGGKR 772


>gb|AAV59370.1| hypothetical protein [Oryza sativa Japonica Group]
          Length = 1332

 Score = 57.8 bits (138), Expect = 1e-06
 Identities = 48/163 (29%), Positives = 79/163 (48%), Gaps = 7/163 (4%)
 Frame = -3

Query: 468 ILKDALYVEGLRKNMIFLYKVLKQQYNLIAFQKKTGGTCCRILQNNRIIAKGTKQNG--- 298
           I+    Y+  L+ N+I L ++     N  A     G    R  +   ++AK T+  G   
Sbjct: 401 IVSGVYYIPKLKSNLISLGQL---DENGCAIHIDDGVMTIRD-RARALVAKVTRTEGRSY 456

Query: 297 LFVMKPVETKCYLRDMETIN-LWHNRLGHINNAYLRKI-EGAVSHG-PKNLTVAKCYNSY 127
           L  +K  +  C +   E +  LWH R GH+N   LR++ +GA+  G P    V +  +  
Sbjct: 457 LLDLKVAQPVCLVASCEEVPWLWHARYGHLNFDSLRRLAQGAMVRGLPDIEQVDRICDCC 516

Query: 126 ITIKLHKSPFKQKTQV-TRQCLEIIHSGLCGPISPSTSQGRRN 1
              K  ++PF  + +    + LE++H  LCGPISP+T  G+R+
Sbjct: 517 QIAKQRRAPFPSEAKYRATEPLELVHGDLCGPISPATPGGKRH 559


>gb|AAO73521.1| gag-pol polyprotein [Glycine max]
          Length = 1574

 Score = 57.8 bits (138), Expect = 1e-06
 Identities = 43/164 (26%), Positives = 80/164 (48%), Gaps = 10/164 (6%)
 Frame = -3

Query: 465  LKDALYVEGLRKNMIFLYKVLKQQYNLIAFQKKTGGTCCRILQNNRIIAKGTK-QNGLFV 289
            L   L V+GL  N+I + ++  + +N+      T   C    + + ++ KG++ ++  ++
Sbjct: 612  LNKVLLVKGLTANLISISQLCDEGFNV----NFTKSECLVTNEKSEVLMKGSRSKDNCYL 667

Query: 288  MKPVETK----CYLRDMETINLWHNRLGHINNAYLRKI--EGAVSHGPKNLTVAK---CY 136
              P ET     C     + + +WH R GH++   ++KI  +GAV  G  NL + +   C 
Sbjct: 668  WTPQETSYSSTCLSSKEDEVRIWHQRFGHLHLRGMKKIIDKGAV-RGIPNLKIEEGRICG 726

Query: 135  NSYITIKLHKSPFKQKTQVTRQCLEIIHSGLCGPISPSTSQGRR 4
               I  ++  S  K + Q T + LE++H  L GP+   +  G+R
Sbjct: 727  ECQIGKQVKMSHQKLQHQTTSRVLELLHMDLMGPMQVESLGGKR 770