BLASTX nr result

ID: Ephedra25_contig00028357 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra25_contig00028357
         (772 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABK22692.1| unknown [Picea sitchensis]                             105   2e-20

>gb|ABK22692.1| unknown [Picea sitchensis]
          Length = 326

 Score =  105 bits (261), Expect = 2e-20
 Identities = 70/240 (29%), Positives = 109/240 (45%), Gaps = 15/240 (6%)
 Frame = +2

Query: 17  RTGMAWGVIENCLYLAGGCKEDGTPVNAVDIYDMETGELWPGPVMPTAVKSDVHFTYKGR 196
           R   AWGVI N LY+AGG    G  +   + YD ETGELW    +P ++  DV F +  +
Sbjct: 105 RGSFAWGVIGNRLYMAGGIGPSGN-IQETEAYDFETGELWAVAALPVSMAVDVFFVFSNK 163

Query: 197 LRLRGW-------GSDGVKKLLCFDPKRNEWQTDKWLDKALKRIPRNPRAAFSL-SGEDL 352
           L +RGW        ++   + L + P RN W  D W+ K +KR+PR  R  F++ S E+L
Sbjct: 164 LCVRGWVRERGGRSAESKSRCLRYCPDRNAWHNDPWMQKVVKRVPRMTRFKFAVTSDEEL 223

Query: 353 FMASVDVSSK------MALIRKLEAATGKWERWFGMFDIDI-GKCRCKEYGSDGGRCVKM 511
           + A +   +          + KL+    +W+++F + D ++   C C        R V+ 
Sbjct: 224 YRAELKTDNLSWKKPWTVFVHKLDRENFEWKQFFNIIDSEVPNHCECPA----AEREVRF 279

Query: 512 VTAGQGLCVLLHASNVESAGNLDLLSPGDVSDVPPGGFVDVPFKYGCISEVSVPCPSQWS 691
                 L  L+H  +             D  +V P   +D       I+EVS  CP +W+
Sbjct: 280 FACRDKLVALMHHDD------------PDEGEVTP--LIDK------ITEVSFLCPFKWA 319


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