BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra25_contig00028341
         (474 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EFA05312.1| hypothetical protein TcasGA2_TC015470 [Tribolium ...    77   3e-12
pir||E84492 probable retroelement pol polyprotein [imported] - A...    70   3e-10
gb|AAM15219.1| putative retroelement pol polyprotein [Arabidopsi...    70   3e-10
gb|AGW47867.1| polyprotein [Phaseolus vulgaris]                        69   5e-10
emb|CBI37296.3| unnamed protein product [Vitis vinifera]               69   5e-10
gb|AAQ01581.1| agCP7521-like protein [Aedes albopictus]                69   5e-10
pir||S00954 pol polyprotein - fruit fly (Drosophila melanogaster...    67   3e-09
gb|AAZ66952.1| 117M18_33 [Brassica rapa]                               66   6e-09
ref|XP_004237308.1| PREDICTED: uncharacterized protein LOC101266...    65   7e-09
ref|XP_004233950.1| PREDICTED: uncharacterized protein LOC101265...    65   9e-09
emb|CAN60238.1| hypothetical protein VITISV_032906 [Vitis vinifera]    65   9e-09
emb|CAN76821.1| hypothetical protein VITISV_017285 [Vitis vinifera]    65   1e-08
ref|XP_004149950.1| PREDICTED: LOW QUALITY PROTEIN: uncharacteri...    64   2e-08
gb|ADB85429.1| putative retrotransposon protein [Phyllostachys e...    64   2e-08
emb|CAN60366.1| hypothetical protein VITISV_031870 [Vitis vinifera]    64   2e-08
emb|CAN71759.1| hypothetical protein VITISV_020777 [Vitis vinifera]    64   2e-08
emb|CAN65188.1| hypothetical protein VITISV_004365 [Vitis vinifera]    64   2e-08
ref|XP_003376336.1| retrovirus-related Pol polyprotein from tran...    64   3e-08
ref|XP_003376808.1| retrovirus-related Pol polyprotein from tran...    64   3e-08
gb|AAT38758.1| Putative gag-pol polyprotein, identical [Solanum ...    64   3e-08

>gb|EFA05312.1| hypothetical protein TcasGA2_TC015470 [Tribolium castaneum]
          Length = 2375

 Score = 76.6 bits (187), Expect = 3e-12
 Identities = 44/119 (36%), Positives = 66/119 (55%), Gaps = 6/119 (5%)
 Frame = -1

Query: 360 IWHNKLEHISN-----VYQSMIEASVFHGPKNLSPTKGCNSFITTKLHRMPF-KHKTRIT 199
           +WH +L H+SN     + ++ + + +     N + ++ C   + +K+ ++PF K     T
Sbjct: 407 LWHRRLGHLSNKNLVTLSKNNMVSGLNIRNSNCNESQICEVCVKSKITKLPFGKRSDNKT 466

Query: 198 TQCLKIIHLDLCGAITPGTYEGKRYILTFSDDYLR*HGVIY*KKKSIVLEIFITFRKRV 22
           T+ L++IH DLCG ITP T++GKRY LTF DDY     V   K KS V E F  F   V
Sbjct: 467 TRVLELIHSDLCGPITPETHDGKRYFLTFLDDYTHFCVVYLLKSKSEVFEYFKCFESMV 525


>pir||E84492 probable retroelement pol polyprotein [imported] - Arabidopsis
           thaliana
          Length = 531

 Score = 70.1 bits (170), Expect = 3e-10
 Identities = 44/128 (34%), Positives = 67/128 (52%), Gaps = 3/128 (2%)
 Frame = -1

Query: 387 FLTDTKITNIWHNKLEHISNV-YQSMIEASVFHG-PKNLSPTKGCNSFITTKLHRMPFKH 214
           +LT T ++++WH ++ H+S +  +SMI+  +  G P  +  ++ C S +  K  R  F  
Sbjct: 295 YLTSTSMSSLWHARMGHVSLITLKSMIDKELIQGAPSLVIESEVCGSCLLGKQTRQSFPQ 354

Query: 213 KTRI-TTQCLKIIHLDLCGAITPGTYEGKRYILTFSDDYLR*HGVIY*KKKSIVLEIFIT 37
            T    T+ L++IH DLCG ITP T  G RYI    DDY R    +  K+K      F  
Sbjct: 355 ATVFRATKKLELIHGDLCGPITPKTSVGNRYIFVLIDDYSRYMWTVLLKEKGDAFFKFKN 414

Query: 36  FRKRVQIE 13
           F+  V+ E
Sbjct: 415 FKALVEKE 422


>gb|AAM15219.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 767

 Score = 70.1 bits (170), Expect = 3e-10
 Identities = 44/128 (34%), Positives = 67/128 (52%), Gaps = 3/128 (2%)
 Frame = -1

Query: 387 FLTDTKITNIWHNKLEHISNV-YQSMIEASVFHG-PKNLSPTKGCNSFITTKLHRMPFKH 214
           +LT T ++++WH ++ H+S +  +SMI+  +  G P  +  ++ C S +  K  R  F  
Sbjct: 192 YLTSTSMSSLWHARMGHVSLITLKSMIDKELIQGAPSLVIESEVCGSCLLGKQTRQSFPQ 251

Query: 213 KTRI-TTQCLKIIHLDLCGAITPGTYEGKRYILTFSDDYLR*HGVIY*KKKSIVLEIFIT 37
            T    T+ L++IH DLCG ITP T  G RYI    DDY R    +  K+K      F  
Sbjct: 252 ATVFRATKKLELIHGDLCGPITPKTSVGNRYIFVLIDDYSRYMWTVLLKEKGDAFFKFKN 311

Query: 36  FRKRVQIE 13
           F+  V+ E
Sbjct: 312 FKALVEKE 319


>gb|AGW47867.1| polyprotein [Phaseolus vulgaris]
          Length = 1471

 Score = 69.3 bits (168), Expect = 5e-10
 Identities = 39/118 (33%), Positives = 65/118 (55%), Gaps = 3/118 (2%)
 Frame = -1

Query: 363 NIWHNKLEHISNV-YQSMIEASVFHGPKNLS-PTKGCNSFITTKLHRMPFKHKTRI-TTQ 193
           ++WH +  H+ +   + + + ++ HG  N+    K C   + +K  R  F  K +    Q
Sbjct: 487 SLWHLRFGHLHHGGLKELAKKNMVHGLPNMDYEGKFCEECVLSKHVRTSFPKKAQYWAKQ 546

Query: 192 CLKIIHLDLCGAITPGTYEGKRYILTFSDDYLR*HGVIY*KKKSIVLEIFITFRKRVQ 19
            L++IH D+CG ITP ++ GKRY +TF DD+ R   V + K+KS   E+F  F+  V+
Sbjct: 547 PLELIHTDICGPITPESFSGKRYFITFIDDFSRKTWVYFLKEKSEAFEVFKKFKVMVE 604


>emb|CBI37296.3| unnamed protein product [Vitis vinifera]
          Length = 3048

 Score = 69.3 bits (168), Expect = 5e-10
 Identities = 42/136 (30%), Positives = 74/136 (54%), Gaps = 4/136 (2%)
 Frame = -1

Query: 408 KPMGTECFLTDTK-ITNIWHNKLEHIS-NVYQSMIEASVFHG-PKNLSPTKGCNSFITTK 238
           +P+ + CF T T+ I  +WH +  H+S    +++ +  + +G P+   P+K C   +  K
Sbjct: 436 QPISSTCFNTVTEDILQLWHCRYGHLSFQGLKTLQQRKMVNGLPQFQPPSKLCKDCLVGK 495

Query: 237 LHRMPFKHKTRI-TTQCLKIIHLDLCGAITPGTYEGKRYILTFSDDYLR*HGVIY*KKKS 61
            HR     K+     + L+++H D+CG I P +   KRY+LTF+DD+ R   V +  +KS
Sbjct: 496 QHRSSIPKKSNWRAAEILQLVHADICGPINPISNSKKRYLLTFTDDFSRKTWVYFLVEKS 555

Query: 60  IVLEIFITFRKRVQIE 13
               +F +F+  V+ E
Sbjct: 556 EAFAVFKSFKTYVEKE 571


>gb|AAQ01581.1| agCP7521-like protein [Aedes albopictus]
          Length = 602

 Score = 69.3 bits (168), Expect = 5e-10
 Identities = 43/124 (34%), Positives = 64/124 (51%), Gaps = 3/124 (2%)
 Frame = -1

Query: 384 LTDTKITNIWHNKLEHI-SNVYQSMIEASVFHGPKNLSPTK--GCNSFITTKLHRMPFKH 214
           L  + +TN+WH +L H+  N  ++M+   +  G  N  P K   C++ +  K+ R PF  
Sbjct: 390 LCSSDVTNLWHRRLGHLCENGMKTMVREDLAKG-LNFKPEKLKFCDACVQGKMCREPFDG 448

Query: 213 KTRITTQCLKIIHLDLCGAITPGTYEGKRYILTFSDDYLR*HGVIY*KKKSIVLEIFITF 34
                T+ L  IH D+CG I P +++G RY ++F DDY     V   KKKS V E F  +
Sbjct: 449 TRERATRPLGRIHSDVCGPIEPASWDGCRYFVSFIDDYSHFAMVFLLKKKSQVFEKFQEY 508

Query: 33  RKRV 22
              V
Sbjct: 509 EAMV 512


>pir||S00954 pol polyprotein - fruit fly (Drosophila melanogaster) transposon
           1731 gi|8702|emb|CAA30503.1| unnamed protein product
           [Drosophila melanogaster]
          Length = 982

 Score = 66.6 bits (161), Expect = 3e-09
 Identities = 40/138 (28%), Positives = 67/138 (48%), Gaps = 4/138 (2%)
 Frame = -1

Query: 420 LFIIKPMGTECFLTDTKITNIWHNKLEHIS-NVYQSMIEASVFHGPKNL--SPTKGCNSF 250
           L++ +     CF       ++WH +  H++ +  Q M+   + +G + +   P   C + 
Sbjct: 118 LYMFQGKHNSCFAAVDADGSLWHKRNGHLNTSSLQEMVRKKMVYGVEKVVFKPDAVCKTC 177

Query: 249 ITTKLHRMPFKHKTRITTQ-CLKIIHLDLCGAITPGTYEGKRYILTFSDDYLR*HGVIY* 73
           +  K+H  PF   TR   +  L +IH DLCG  +  +  G +Y LTF DD  R   V + 
Sbjct: 178 MLAKIHVQPFPKTTRSRAEELLDMIHSDLCGPFSTPSLAGSKYFLTFIDDKSRRIFVYFL 237

Query: 72  KKKSIVLEIFITFRKRVQ 19
           +KK  V   F+ F+K V+
Sbjct: 238 RKKDEVFTKFVEFKKLVE 255


>gb|AAZ66952.1| 117M18_33 [Brassica rapa]
          Length = 681

 Score = 65.9 bits (159), Expect = 6e-09
 Identities = 41/112 (36%), Positives = 57/112 (50%), Gaps = 3/112 (2%)
 Frame = -1

Query: 357 WHNKLEHIS-NVYQSMIEASVFHGPKNLSPTKG-CNSFITTKLHRMPFKHKTRITTQC-L 187
           WH +L H++ +  + MI   +  G   ++ TK  C S +  K  R PF   T     C L
Sbjct: 429 WHARLGHVNTDTMKVMINKQLVTGMPEIAVTKETCVSCLRGKQVRQPFPQSTAYRASCPL 488

Query: 186 KIIHLDLCGAITPGTYEGKRYILTFSDDYLR*HGVIY*KKKSIVLEIFITFR 31
           +++H DLCG ITP T   KRY+    DDY R    +  +KKS  L+ F  FR
Sbjct: 489 ELVHGDLCGPITPSTPGQKRYVFVLIDDYSRYMWTVLLEKKSEALDKFKRFR 540


>ref|XP_004237308.1| PREDICTED: uncharacterized protein LOC101266020 [Solanum
           lycopersicum]
          Length = 771

 Score = 65.5 bits (158), Expect = 7e-09
 Identities = 38/128 (29%), Positives = 67/128 (52%), Gaps = 4/128 (3%)
 Frame = -1

Query: 390 CFLTDTKITNIWHNKLEHISN-VYQSMIEASVFHG-PK-NLSPTKGCNSFITTKLHRMPF 220
           C     +  ++WH +L H+S+ +   +I   +  G PK   +  K C + +  K  R  F
Sbjct: 428 CLSAQNENADLWHRRLGHVSSSLLNKLISKDLVQGLPKLKFAENKICEACVKGKQIRSSF 487

Query: 219 KHKTRITT-QCLKIIHLDLCGAITPGTYEGKRYILTFSDDYLR*HGVIY*KKKSIVLEIF 43
           K K ++T+ + L+++H+DLCG +   +  GK+YIL   DDY R   + + + K+   E  
Sbjct: 488 KPKNQVTSSRTLELLHMDLCGPLKVQSRNGKKYILVIVDDYSRYTWMRFLRSKADTTEEL 547

Query: 42  ITFRKRVQ 19
           + F K +Q
Sbjct: 548 VVFFKMIQ 555


>ref|XP_004233950.1| PREDICTED: uncharacterized protein LOC101265997 [Solanum
           lycopersicum]
          Length = 953

 Score = 65.1 bits (157), Expect = 9e-09
 Identities = 42/138 (30%), Positives = 69/138 (50%), Gaps = 10/138 (7%)
 Frame = -1

Query: 384 LTDTKITNIWHNKLEHISNVYQSMIEASVFHGPKNLSPTK--GCNSFITTKLHRMPFKHK 211
           + D+++  +WH +L H S    S +   VFH P      +   C      K HR+PF H 
Sbjct: 508 IADSRVL-LWHQRLGHTS----SSVLTQVFHFPVTQCSKEVHTCTICPLAKQHRLPFFHS 562

Query: 210 TRITTQCLKIIHLDLCGAITPGTYEGKRYILTFSDDYLR*HGVIY*KKKS---IVLEIFI 40
           T ++T+  +++H+D+ G     T++G R+ +T  DDY R   +   K KS   +VL+ F 
Sbjct: 563 TSMSTKAFQLLHIDVWGPFNTTTHDGNRFFVTIVDDYTRMLWLFLVKLKSDVCVVLQNFF 622

Query: 39  T-----FRKRVQIEKIKN 1
                 F+ +VQI +  N
Sbjct: 623 VLVQTQFQSKVQIIRTDN 640


>emb|CAN60238.1| hypothetical protein VITISV_032906 [Vitis vinifera]
          Length = 1430

 Score = 65.1 bits (157), Expect = 9e-09
 Identities = 39/123 (31%), Positives = 63/123 (51%), Gaps = 3/123 (2%)
 Frame = -1

Query: 378 DTKITNIWHNKLEHISNVYQSMIEAS--VFHGPKNLSPTKGCNSFITTKLHRMPF-KHKT 208
           +T  +N+WH +  H++     ++     VF  PK +     C   I  K  + PF K ++
Sbjct: 544 ETSESNLWHLRYGHLNVKGLKLLSKKEMVFELPK-IDSVNVCEGCIYGKQSKKPFPKGRS 602

Query: 207 RITTQCLKIIHLDLCGAITPGTYEGKRYILTFSDDYLR*HGVIY*KKKSIVLEIFITFRK 28
           R  + CL+IIH DLCG +   ++ G RY L F+DD+ R   V + + K+   E F  F+ 
Sbjct: 603 RRASSCLEIIHADLCGPMQTASFGGSRYFLLFTDDHSRMSWVYFLQSKAETFETFKKFKA 662

Query: 27  RVQ 19
            V+
Sbjct: 663 FVE 665


>emb|CAN76821.1| hypothetical protein VITISV_017285 [Vitis vinifera]
          Length = 672

 Score = 64.7 bits (156), Expect = 1e-08
 Identities = 43/143 (30%), Positives = 76/143 (53%), Gaps = 5/143 (3%)
 Frame = -1

Query: 426 NGLFIIKPMGTECFL-TDTK-ITNIWHNKLEHIS-NVYQSMIEASVFHGPKNLS-PTKGC 259
           N LF +K    + FL  + K ++ +WH +  H++    +++ +  +  G   +S P++ C
Sbjct: 293 NRLFPLKIDSVQSFLMAEVKDLSWLWHLRYGHLNFGGLKTLQQKHMVTGLPQISIPSQVC 352

Query: 258 NSFITTKLHRMPFKH-KTRITTQCLKIIHLDLCGAITPGTYEGKRYILTFSDDYLR*HGV 82
              +  K HR  F   K+R     L+++H D+CG I P +  GK+Y++ F DDY R   V
Sbjct: 353 EECVVGKQHRSQFPQGKSRRAKNVLELVHSDICGLINPTSNGGKKYLIIFIDDYSRKTWV 412

Query: 81  IY*KKKSIVLEIFITFRKRVQIE 13
            + ++KS     F +F+ RV+ E
Sbjct: 413 SFLQEKSEAFSAFKSFKARVEKE 435


>ref|XP_004149950.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein
           LOC101216349 [Cucumis sativus]
          Length = 1830

 Score = 64.3 bits (155), Expect = 2e-08
 Identities = 47/145 (32%), Positives = 71/145 (48%), Gaps = 6/145 (4%)
 Frame = -1

Query: 429 HNGLFIIKPMGTE--CFLTDTKITN-IWHNKLEHIS-NVYQSMIEASVFHGPKNLSPTKG 262
           HN +F IK    +  CF T    T+ +WH +  H+S +    M +  +  G  N+     
Sbjct: 412 HNKMFPIKICYEKLVCFETLVNDTSWLWHCRFGHLSFDTLSHMCQQHMVRGMSNIKKEDQ 471

Query: 261 -CNSFITTKLHRMPFKHK-TRITTQCLKIIHLDLCGAITPGTYEGKRYILTFSDDYLR*H 88
            C + +  K HR  F    +   ++ L+++H DLCG +   T+ G RY LTF DDY R  
Sbjct: 472 LCEACVFGKHHRNSFPTGGSWRASKPLELVHTDLCGPMRTTTHGGNRYFLTFIDDYSRKT 531

Query: 87  GVIY*KKKSIVLEIFITFRKRVQIE 13
            +   K+KS   E F TF+  V+ E
Sbjct: 532 WIYLLKEKSATFECFKTFKAMVENE 556


>gb|ADB85429.1| putative retrotransposon protein [Phyllostachys edulis]
          Length = 1313

 Score = 64.3 bits (155), Expect = 2e-08
 Identities = 46/145 (31%), Positives = 66/145 (45%), Gaps = 9/145 (6%)
 Frame = -1

Query: 426 NGLFIIKPMGTECFLTDTK--------ITNIWHNKLEHISNVYQSMIEASVFHGPKNLSP 271
           NGLFI+       F  + K         T IWH +L HIS      +         +L  
Sbjct: 497 NGLFILNLDDAPIFNINAKRLRPNNMNSTFIWHCRLGHISEKRMKKLHDDGILNSFDLES 556

Query: 270 TKGCNSFITTKLHRMPFKHKTRITTQCLKIIHLDLCGAITPGTYEGKRYILTFSDDYLR* 91
            + C S I  K+ + PF  +    +  L +IH D+CG ++     G +Y +TF+DDY R 
Sbjct: 557 FETCESCILGKMTKTPFTGRNERASDLLALIHTDVCGPMSTTARGGFQYFITFTDDYSR- 615

Query: 90  HGVIY-*KKKSIVLEIFITFRKRVQ 19
           +G IY  + KS   E F  F+  VQ
Sbjct: 616 YGYIYLMRHKSESFEKFKEFQNEVQ 640


>emb|CAN60366.1| hypothetical protein VITISV_031870 [Vitis vinifera]
          Length = 1274

 Score = 64.3 bits (155), Expect = 2e-08
 Identities = 39/123 (31%), Positives = 63/123 (51%), Gaps = 3/123 (2%)
 Frame = -1

Query: 378 DTKITNIWHNKLEHISNVYQSMIEAS--VFHGPKNLSPTKGCNSFITTKLHRMPF-KHKT 208
           +T  +N+WH +  H++     ++     VF  PK +     C   I  K  + PF K ++
Sbjct: 433 ETSESNLWHLRYGHLNVKGLKLLSKKEMVFGLPK-IDSVNVCEGCIYGKQSKKPFPKGRS 491

Query: 207 RITTQCLKIIHLDLCGAITPGTYEGKRYILTFSDDYLR*HGVIY*KKKSIVLEIFITFRK 28
           R  + CL+IIH DLCG +   ++ G RY L F+DD+ R   V + + K+   E F  F+ 
Sbjct: 492 RRASSCLEIIHADLCGPMQTASFGGSRYFLLFTDDHSRMSWVYFLQSKAETFETFKKFKA 551

Query: 27  RVQ 19
            V+
Sbjct: 552 FVE 554


>emb|CAN71759.1| hypothetical protein VITISV_020777 [Vitis vinifera]
          Length = 1472

 Score = 64.3 bits (155), Expect = 2e-08
 Identities = 39/123 (31%), Positives = 63/123 (51%), Gaps = 3/123 (2%)
 Frame = -1

Query: 378 DTKITNIWHNKLEHISNVYQSMIEAS--VFHGPKNLSPTKGCNSFITTKLHRMPF-KHKT 208
           +T  +N+WH +  H++     ++     VF  PK +     C   I  K  + PF K ++
Sbjct: 418 ETSESNLWHLRYGHLNVKGLKLLSKKEMVFGLPK-IDSVNVCEGCIYGKQSKKPFPKGRS 476

Query: 207 RITTQCLKIIHLDLCGAITPGTYEGKRYILTFSDDYLR*HGVIY*KKKSIVLEIFITFRK 28
           R  + CL+IIH DLCG +   ++ G RY L F+DD+ R   V + + K+   E F  F+ 
Sbjct: 477 RRASSCLEIIHADLCGPMQTASFGGSRYFLLFTDDHSRMSWVYFLQSKAETFETFKKFKA 536

Query: 27  RVQ 19
            V+
Sbjct: 537 FVE 539


>emb|CAN65188.1| hypothetical protein VITISV_004365 [Vitis vinifera]
          Length = 1265

 Score = 63.9 bits (154), Expect = 2e-08
 Identities = 44/143 (30%), Positives = 78/143 (54%), Gaps = 5/143 (3%)
 Frame = -1

Query: 414 IIKPMGTECFLTDTK-ITNIWHNKLEHIS-NVYQSMIEASVFHG-PKNLSPTKGCNSFIT 244
           I +P+ + CF   T+ I ++WH +  H+S    +++ +  + +G P+  SP + C   + 
Sbjct: 393 ISQPIASTCFNAITEDIVHLWHCRYGHLSFKGLKTLQQKKMVNGLPQLKSPLRLCKDCLV 452

Query: 243 TKLHRMPFKHK-TRITTQCLKIIHLDLCGAITPGTYEGKRYILTFSDDYLR*HGVIY*KK 67
            K  R  F  K T   +Q L ++H D+ G I P +   KRY++TF+DD+ R   V +  +
Sbjct: 453 GKQQRYSFPWKSTWRASQILXLVHADIXGPIKPISNSKKRYLITFTDDFSRKTWVYFLIE 512

Query: 66  KSIVLEIFITFRK-RVQIEKIKN 1
           KS   E F+ F++ ++ +EK  N
Sbjct: 513 KS---EAFVVFKRFKIHVEKETN 532


>ref|XP_003376336.1| retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Trichinella spiralis] gi|316974954|gb|EFV58419.1|
           retrovirus-related Pol polyprotein from transposon TNT
           1-94 [Trichinella spiralis]
          Length = 1003

 Score = 63.5 bits (153), Expect = 3e-08
 Identities = 41/146 (28%), Positives = 74/146 (50%), Gaps = 2/146 (1%)
 Frame = -1

Query: 435 TEHNGLFIIKPMGTECFLTDTKITNIWHNKLEHISNVYQSMIEASVFHG-PKNLSPTKGC 259
           T++NGL+ +     +  +T   + ++WH +L H+S     +++     G P +      C
Sbjct: 92  TQYNGLYRLNRCD-QWAMTVHDVPDLWHRQLGHLSRGSMKLLQDGQATGIPSDAITKTDC 150

Query: 258 NSFITTKLHRMPF-KHKTRITTQCLKIIHLDLCGAITPGTYEGKRYILTFSDDYLR*HGV 82
            + +  K  R+PF K  T+ + + L+++H D+CG +   +  G RY L+F DD+ R   V
Sbjct: 151 VTCLKGKQCRLPFPKSATKRSKEVLELVHSDICGPMQVASVGGARYFLSFIDDFSRKSFV 210

Query: 81  IY*KKKSIVLEIFITFRKRVQIEKIK 4
            + K K+ VL  F  F   V+ +  K
Sbjct: 211 YFLKHKNEVLSKFKDFIAMVERQTSK 236


>ref|XP_003376808.1| retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Trichinella spiralis] gi|316974460|gb|EFV57947.1|
           retrovirus-related Pol polyprotein from transposon TNT
           1-94 [Trichinella spiralis]
          Length = 1324

 Score = 63.5 bits (153), Expect = 3e-08
 Identities = 41/146 (28%), Positives = 74/146 (50%), Gaps = 2/146 (1%)
 Frame = -1

Query: 435 TEHNGLFIIKPMGTECFLTDTKITNIWHNKLEHISNVYQSMIEASVFHG-PKNLSPTKGC 259
           T++NGL+ +     +  +T   + ++WH +L H+S     +++     G P +      C
Sbjct: 399 TQYNGLYRLNRCD-QWAMTVHDVPDLWHRRLGHLSRGSMKLLQDGQATGIPSDAITKTDC 457

Query: 258 NSFITTKLHRMPF-KHKTRITTQCLKIIHLDLCGAITPGTYEGKRYILTFSDDYLR*HGV 82
            + +  K  R+PF K  T+ + + L+++H D+CG +   +  G RY L+F DD+ R   V
Sbjct: 458 VTCLKGKQCRLPFPKSATKRSKEVLELVHSDICGPMQVASVGGARYFLSFIDDFSRKSFV 517

Query: 81  IY*KKKSIVLEIFITFRKRVQIEKIK 4
            + K K+ VL  F  F   V+ +  K
Sbjct: 518 YFLKHKNEVLPKFKDFIAMVERQTSK 543


>gb|AAT38758.1| Putative gag-pol polyprotein, identical [Solanum demissum]
          Length = 1333

 Score = 63.5 bits (153), Expect = 3e-08
 Identities = 39/118 (33%), Positives = 59/118 (50%), Gaps = 2/118 (1%)
 Frame = -1

Query: 366 TNIWHNKLEHIS-NVYQSMIEASVFHGPKNLSPTKGCNSFITTKLHRMPFK-HKTRITTQ 193
           TN+WH +  H++ N  + +++  +  G  N+     C   I  K  R  F   K+   T 
Sbjct: 442 TNLWHLRYGHLNVNWLKLLVQKDMVIGLPNIKELDLCEGCIYGKQTRKSFPVGKSWRATT 501

Query: 192 CLKIIHLDLCGAITPGTYEGKRYILTFSDDYLR*HGVIY*KKKSIVLEIFITFRKRVQ 19
           CL+++H DLCG +   +  G RY L F+DDY R   V + K KS   E F  F+  V+
Sbjct: 502 CLELVHADLCGPMKMESLGGSRYFLMFTDDYSRFSWVYFLKFKSETFETFKKFKAFVE 559