BLASTX nr result
ID: Ephedra25_contig00028176
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra25_contig00028176
(969 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAN62375.1| hypothetical protein VITISV_028920 [Vitis vinifera] 54 2e-08
gb|EEC80813.1| hypothetical protein OsI_23383 [Oryza sativa Indi... 46 1e-06
ref|XP_002450932.1| hypothetical protein SORBIDRAFT_05g021390 [S... 41 1e-06
gb|ABA98003.1| retrotransposon protein, putative, unclassified [... 42 1e-06
ref|XP_006300939.1| hypothetical protein CARUB_v10021318mg, part... 52 1e-06
ref|XP_003577179.1| PREDICTED: uncharacterized protein LOC100830... 49 2e-06
ref|XP_004986389.1| PREDICTED: putative ribonuclease H protein A... 47 2e-06
ref|XP_002460808.1| hypothetical protein SORBIDRAFT_02g035330 [S... 43 3e-06
emb|CAN78583.1| hypothetical protein VITISV_029931 [Vitis vinifera] 50 5e-06
ref|XP_006337991.1| PREDICTED: putative ribonuclease H protein A... 46 6e-06
ref|XP_006347119.1| PREDICTED: putative ribonuclease H protein A... 46 7e-06
emb|CAN67355.1| hypothetical protein VITISV_002170 [Vitis vinifera] 50 8e-06
emb|CAN79808.1| hypothetical protein VITISV_014911 [Vitis vinifera] 50 8e-06
>emb|CAN62375.1| hypothetical protein VITISV_028920 [Vitis vinifera]
Length = 843
Score = 53.5 bits (127), Expect(2) = 2e-08
Identities = 24/53 (45%), Positives = 33/53 (62%)
Frame = -3
Query: 841 SMFSWLFRKKKILT*DRLRRMGSKIPNCCLLCLSGVESVEHFTKECRYVKEVW 683
+ F+W K+LT DRL+R G ++PNCC LC S ESV+H C V+ +W
Sbjct: 430 AFFAWEATWGKVLTLDRLQRRGWQLPNCCFLCGSEEESVDHLLIHCIVVRVLW 482
Score = 32.7 bits (73), Expect(2) = 2e-08
Identities = 18/57 (31%), Positives = 25/57 (43%), Gaps = 4/57 (7%)
Frame = -1
Query: 663 HWDKNLQVADKALSLEERVKRRNRKFIFE----HVAWAIWKERNTRVFRNTCHSSKV 505
HW V LS + RK I++ ++ W +WKERN FR C + V
Sbjct: 492 HWVFPETVKKVLLSWRGPFVGKKRKKIWKSIPLYIFWTVWKERNRLAFRGVCSNESV 548
>gb|EEC80813.1| hypothetical protein OsI_23383 [Oryza sativa Indica Group]
Length = 305
Score = 45.8 bits (107), Expect(2) = 1e-06
Identities = 21/53 (39%), Positives = 29/53 (54%)
Frame = -3
Query: 835 FSWLFRKKKILT*DRLRRMGSKIPNCCLLCLSGVESVEHFTKECRYVKEVWQH 677
F WL +KILT D+L+ G + C LC E+ H EC + K+VW+H
Sbjct: 166 FGWLMIHRKILTADKLQLRGWDNSHICPLCGVEPETAMHLLMECAFAKQVWRH 218
Score = 34.3 bits (77), Expect(2) = 1e-06
Identities = 13/28 (46%), Positives = 18/28 (64%)
Frame = -1
Query: 606 KRRNRKFIFEHVAWAIWKERNTRVFRNT 523
+RRN +F + AW IW +RN R+F T
Sbjct: 252 QRRNFDGLFIYTAWGIWLQRNARIFNGT 279
>ref|XP_002450932.1| hypothetical protein SORBIDRAFT_05g021390 [Sorghum bicolor]
gi|241936775|gb|EES09920.1| hypothetical protein
SORBIDRAFT_05g021390 [Sorghum bicolor]
Length = 1093
Score = 41.2 bits (95), Expect(2) = 1e-06
Identities = 17/52 (32%), Positives = 29/52 (55%)
Frame = -3
Query: 838 MFSWLFRKKKILT*DRLRRMGSKIPNCCLLCLSGVESVEHFTKECRYVKEVW 683
+F WL + + T DR RR G ++ + C LC E+++H C + ++VW
Sbjct: 950 IFLWLAIRGRHWTADRRRRHGLQVVDICYLCDQEPETIDHIVASCSFSRQVW 1001
Score = 38.5 bits (88), Expect(2) = 1e-06
Identities = 18/35 (51%), Positives = 23/35 (65%)
Frame = -1
Query: 606 KRRNRKFIFEHVAWAIWKERNTRVFRNTCHSSKVT 502
+++ +F VAW IWKERN R FRNT SS +T
Sbjct: 1035 RQKGADTLFALVAWEIWKERNARCFRNT--SSNIT 1067
>gb|ABA98003.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 583
Score = 42.4 bits (98), Expect(2) = 1e-06
Identities = 18/52 (34%), Positives = 29/52 (55%)
Frame = -3
Query: 838 MFSWLFRKKKILT*DRLRRMGSKIPNCCLLCLSGVESVEHFTKECRYVKEVW 683
+FSWL + ++ T DRL+ G C LC +E+++H EC K++W
Sbjct: 437 IFSWLVLQNRVWTTDRLQIRGWPNNYFCQLCFRNLETIDHLLFECPVSKQIW 488
Score = 37.4 bits (85), Expect(2) = 1e-06
Identities = 17/47 (36%), Positives = 27/47 (57%), Gaps = 3/47 (6%)
Frame = -1
Query: 660 WDKNLQVAD---KALSLEERVKRRNRKFIFEHVAWAIWKERNTRVFR 529
W+ + + D + S E K++ + +F +AW IWKERN R+FR
Sbjct: 504 WNTSRNLLDWWTQGTSDPEATKQKGLRALFLLIAWEIWKERNARIFR 550
>ref|XP_006300939.1| hypothetical protein CARUB_v10021318mg, partial [Capsella rubella]
gi|482569649|gb|EOA33837.1| hypothetical protein
CARUB_v10021318mg, partial [Capsella rubella]
Length = 290
Score = 51.6 bits (122), Expect(2) = 1e-06
Identities = 27/66 (40%), Positives = 34/66 (51%), Gaps = 1/66 (1%)
Frame = -3
Query: 859 KRNHPESMF-SWLFRKKKILT*DRLRRMGSKIPNCCLLCLSGVESVEHFTKECRYVKEVW 683
K P+ F SW+ + ++ T DRLR G +P+ CLLC S ES H EC Y EVW
Sbjct: 120 KERIPKHAFISWVVIRNRLTTRDRLRGWGMNVPSECLLCTSSAESRLHLFFECAYSHEVW 179
Query: 682 QHNAPH 665
H
Sbjct: 180 SSFFTH 185
Score = 28.1 bits (61), Expect(2) = 1e-06
Identities = 10/29 (34%), Positives = 19/29 (65%)
Frame = -1
Query: 591 KFIFEHVAWAIWKERNTRVFRNTCHSSKV 505
K IF+ V + +W+ERN+R+ ++ S +
Sbjct: 214 KLIFQAVVYGLWRERNSRLHTSSFKSPAI 242
>ref|XP_003577179.1| PREDICTED: uncharacterized protein LOC100830461 [Brachypodium
distachyon]
Length = 1564
Score = 49.3 bits (116), Expect(2) = 2e-06
Identities = 23/53 (43%), Positives = 29/53 (54%)
Frame = -3
Query: 838 MFSWLFRKKKILT*DRLRRMGSKIPNCCLLCLSGVESVEHFTKECRYVKEVWQ 680
+FSWL + +ILT DRL G C LCL ES H K+C + K VW+
Sbjct: 1417 IFSWLLLQNRILTADRLAIRGWPHDPVCQLCLGAPESATHLCKDCPFTKSVWR 1469
Score = 30.0 bits (66), Expect(2) = 2e-06
Identities = 17/43 (39%), Positives = 22/43 (51%)
Frame = -1
Query: 660 WDKNLQVADKALSLEERVKRRNRKFIFEHVAWAIWKERNTRVF 532
WD +L DK+ KRR + +V W WKERN R+F
Sbjct: 1492 WDASLPHTDKS------AKRRMSGHLI-YVWWNAWKERNHRIF 1527
>ref|XP_004986389.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Setaria
italica]
Length = 610
Score = 46.6 bits (109), Expect(2) = 2e-06
Identities = 25/74 (33%), Positives = 37/74 (50%), Gaps = 2/74 (2%)
Frame = -3
Query: 898 ESSTQQKEKKNLSKRNHPESM--FSWLFRKKKILT*DRLRRMGSKIPNCCLLCLSGVESV 725
E S + + K + K P + F+WL K+++ T DR RR G + C LC E+
Sbjct: 443 EGSIRLQGSKRIWKNWTPPRVKFFTWLAAKRRLWTADRRRRHGLDARDNCWLCDQEAETS 502
Query: 724 EHFTKECRYVKEVW 683
+H C Y KE+W
Sbjct: 503 DHILVTCAYAKEIW 516
Score = 32.7 bits (73), Expect(2) = 2e-06
Identities = 15/41 (36%), Positives = 22/41 (53%)
Frame = -1
Query: 630 ALSLEERVKRRNRKFIFEHVAWAIWKERNTRVFRNTCHSSK 508
A L+ KRR + V W +W+ERN R+F T S++
Sbjct: 543 ARRLQPPTKRRGTDSLVMLVLWNLWRERNARLFDGTSSSTQ 583
>ref|XP_002460808.1| hypothetical protein SORBIDRAFT_02g035330 [Sorghum bicolor]
gi|241924185|gb|EER97329.1| hypothetical protein
SORBIDRAFT_02g035330 [Sorghum bicolor]
Length = 748
Score = 43.1 bits (100), Expect(2) = 3e-06
Identities = 19/52 (36%), Positives = 28/52 (53%)
Frame = -3
Query: 838 MFSWLFRKKKILT*DRLRRMGSKIPNCCLLCLSGVESVEHFTKECRYVKEVW 683
+F WL +++ T DR RR G CLLC E+++H C Y K++W
Sbjct: 3 LFLWLAFRRRHWTADRRRRYGLDAHANCLLCDQEPETIDHIVITCSYAKQIW 54
Score = 35.4 bits (80), Expect(2) = 3e-06
Identities = 21/52 (40%), Positives = 26/52 (50%)
Frame = -1
Query: 678 TMPLTHWDKNLQVADKALSLEERVKRRNRKFIFEHVAWAIWKERNTRVFRNT 523
T L H D L+ + SL ++ IF VAW IWKERN R+F T
Sbjct: 64 TSALRHCDNVLEWWEVWRSLWVGEYKQGADSIFALVAWEIWKERNARLFCGT 115
>emb|CAN78583.1| hypothetical protein VITISV_029931 [Vitis vinifera]
Length = 1875
Score = 49.7 bits (117), Expect(2) = 5e-06
Identities = 22/53 (41%), Positives = 30/53 (56%)
Frame = -3
Query: 841 SMFSWLFRKKKILT*DRLRRMGSKIPNCCLLCLSGVESVEHFTKECRYVKEVW 683
+ F+W KILT DRL+R G ++PNCC LC E+V H C + +W
Sbjct: 1723 AFFAWEATWGKILTLDRLQRRGWQLPNCCFLCGCEEENVHHILLHCTVARVLW 1775
Score = 28.1 bits (61), Expect(2) = 5e-06
Identities = 16/49 (32%), Positives = 21/49 (42%), Gaps = 4/49 (8%)
Frame = -1
Query: 663 HWDKNLQVADKALSLEERVKRRNRKFIFEHVA----WAIWKERNTRVFR 529
HW V + LS + RK I+ + W +WKERN FR
Sbjct: 1785 HWVFPETVIEVLLSWRGSFVGKKRKKIWNSIPVCIFWTVWKERNRLAFR 1833
>ref|XP_006337991.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
tuberosum]
Length = 556
Score = 46.2 bits (108), Expect(2) = 6e-06
Identities = 19/57 (33%), Positives = 31/57 (54%)
Frame = -3
Query: 850 HPESMFSWLFRKKKILT*DRLRRMGSKIPNCCLLCLSGVESVEHFTKECRYVKEVWQ 680
H S F WL K+ LT D + + G + + C LC +E+V H C+Y +++W+
Sbjct: 404 HKVSCFIWLLAKEAALTQDNVMKRGITLCSRCFLCGETLETVNHLFLHCKYTRQLWR 460
Score = 31.2 bits (69), Expect(2) = 6e-06
Identities = 19/47 (40%), Positives = 24/47 (51%), Gaps = 4/47 (8%)
Frame = -1
Query: 660 WDKNLQVADKALSLEER---VKRRNR-KFIFEHVAWAIWKERNTRVF 532
W +V + S EE K R R + I + WAIWKERN+R F
Sbjct: 470 WTMPRRVTEALYSWEEAGALAKDRTRWRIIPASIWWAIWKERNSRCF 516
>ref|XP_006347119.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
tuberosum]
Length = 450
Score = 46.2 bits (108), Expect(2) = 7e-06
Identities = 19/57 (33%), Positives = 31/57 (54%)
Frame = -3
Query: 850 HPESMFSWLFRKKKILT*DRLRRMGSKIPNCCLLCLSGVESVEHFTKECRYVKEVWQ 680
H S F WL K+ LT D + + G + + C LC +E+V H C+Y +++W+
Sbjct: 298 HKVSCFIWLLAKEAALTQDNVMKRGITLCSRCFLCGETLETVNHLFLHCKYTRQLWR 354
Score = 31.2 bits (69), Expect(2) = 7e-06
Identities = 19/47 (40%), Positives = 24/47 (51%), Gaps = 4/47 (8%)
Frame = -1
Query: 660 WDKNLQVADKALSLEER---VKRRNR-KFIFEHVAWAIWKERNTRVF 532
W +V + S EE K R R + I + WAIWKERN+R F
Sbjct: 364 WTMPRRVTEALYSWEEAGALAKDRTRWRIIPASIWWAIWKERNSRCF 410
>emb|CAN67355.1| hypothetical protein VITISV_002170 [Vitis vinifera]
Length = 1385
Score = 49.7 bits (117), Expect(2) = 8e-06
Identities = 26/72 (36%), Positives = 37/72 (51%), Gaps = 2/72 (2%)
Frame = -3
Query: 892 STQQKEKKNLSKRNHPESM--FSWLFRKKKILT*DRLRRMGSKIPNCCLLCLSGVESVEH 719
ST KK + N P + F+W +ILT DRL++ G ++PNCC LC E+V H
Sbjct: 1253 STLLFPKKGIWVENVPSKLAFFAWEATWGRILTLDRLQKRGWQLPNCCYLCGMDEENVNH 1312
Query: 718 FTKECRYVKEVW 683
C + +W
Sbjct: 1313 LLLHCTVARVLW 1324
Score = 27.3 bits (59), Expect(2) = 8e-06
Identities = 13/29 (44%), Positives = 16/29 (55%)
Frame = -1
Query: 615 ERVKRRNRKFIFEHVAWAIWKERNTRVFR 529
E++ R FIF W +WKERN FR
Sbjct: 1358 EKIWRSIPLFIF----WTVWKERNRLAFR 1382
>emb|CAN79808.1| hypothetical protein VITISV_014911 [Vitis vinifera]
Length = 869
Score = 49.7 bits (117), Expect(2) = 8e-06
Identities = 26/72 (36%), Positives = 37/72 (51%), Gaps = 2/72 (2%)
Frame = -3
Query: 892 STQQKEKKNLSKRNHPESM--FSWLFRKKKILT*DRLRRMGSKIPNCCLLCLSGVESVEH 719
ST KK + N P + F+W +ILT DRL++ G ++PNCC LC E+V H
Sbjct: 732 STLLFPKKGIWVENVPSKLAFFAWEATWGRILTLDRLQKRGWQLPNCCYLCGMDEENVNH 791
Query: 718 FTKECRYVKEVW 683
C + +W
Sbjct: 792 LLLHCTVARVLW 803
Score = 27.3 bits (59), Expect(2) = 8e-06
Identities = 13/29 (44%), Positives = 16/29 (55%)
Frame = -1
Query: 615 ERVKRRNRKFIFEHVAWAIWKERNTRVFR 529
E++ R FIF W +WKERN FR
Sbjct: 837 EKIWRSIPLFIF----WTVWKERNRLAFR 861