BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra25_contig00028167
         (617 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EOY23170.1| DNA mismatch repair protein MSH3 isoform 2, parti...   162   9e-38
gb|EOY23169.1| DNA mismatch repair protein MSH3 isoform 1 [Theob...   162   9e-38
ref|XP_004234387.1| PREDICTED: DNA mismatch repair protein MSH3-...   155   1e-35
ref|XP_006353313.1| PREDICTED: DNA mismatch repair protein MSH3-...   154   2e-35
ref|XP_002510803.1| DNA mismatch repair protein MSH3, putative [...   154   2e-35
ref|XP_004308095.1| PREDICTED: DNA mismatch repair protein MSH3-...   154   2e-35
ref|XP_006827711.1| hypothetical protein AMTR_s00009p00259730 [A...   153   3e-35
gb|EMT16743.1| DNA mismatch repair protein Msh3 [Aegilops tauschii]   153   3e-35
ref|XP_002263286.2| PREDICTED: DNA mismatch repair protein Msh3-...   153   4e-35
ref|XP_004960023.1| PREDICTED: LOW QUALITY PROTEIN: DNA mismatch...   152   9e-35
ref|XP_001758062.1| predicted protein [Physcomitrella patens] gi...   150   3e-34
ref|NP_001054300.1| Os04g0682900 [Oryza sativa Japonica Group] g...   149   5e-34
emb|CAE03438.1| OSJNBa0032F06.21 [Oryza sativa Japonica Group]        149   5e-34
ref|XP_006283020.1| hypothetical protein CARUB_v10004012mg [Caps...   145   9e-33
gb|EXC15971.1| DNA mismatch repair protein Msh3 [Morus notabilis]     144   2e-32
ref|XP_006653893.1| PREDICTED: DNA mismatch repair protein MSH3-...   144   2e-32
ref|XP_004168537.1| PREDICTED: DNA mismatch repair protein MSH3-...   143   3e-32
ref|XP_004140847.1| PREDICTED: DNA mismatch repair protein MSH3-...   143   3e-32
ref|XP_006490371.1| PREDICTED: DNA mismatch repair protein MSH3-...   143   4e-32
ref|NP_194284.2| DNA mismatch repair protein MSH3 [Arabidopsis t...   142   6e-32

>gb|EOY23170.1| DNA mismatch repair protein MSH3 isoform 2, partial [Theobroma cacao]
          Length = 861

 Score =  162 bits (409), Expect = 9e-38
 Identities = 95/204 (46%), Positives = 129/204 (63%)
 Frame = -2

Query: 616  LKLMDHTCTAFGARLFRHWVTHPLCNENMILARLEAVSEFANYMSGVRRKXXXXXXXXXX 437
            L++M+HT T +G+RL RHWVTHPLC+  MI ARL+AVSE A  M     K          
Sbjct: 457  LQIMNHTLTIYGSRLLRHWVTHPLCDRTMISARLDAVSEIALSMGCY--KVSQSIIEIDG 514

Query: 436  XXXXXGAASHSFSEENSCHGIIASVLSSLGKVPDIERGITRIFHQTATSAEFVSVIHSLL 257
                   A   F      + +++SVL+ LG+ PDI+RGITRIFH+TAT AEF++VI ++L
Sbjct: 515  EDSDVTIAQPEF------YSVLSSVLTFLGRSPDIQRGITRIFHRTATPAEFIAVIKAIL 568

Query: 256  TAAKQLERIECIENTNDLSSTNNQMGIFRVQSHLLRRLISCASSSVVIEHATGFLSALNK 77
            +A KQL+R+   E   D  S   ++GI  VQS LL+RLI  ASSS V+ +A   LS LNK
Sbjct: 569  SAGKQLQRLHIDEEHEDNCSKKVRVGI--VQSALLKRLILTASSSNVLGNAAKLLSFLNK 626

Query: 76   DAAVQGDKQNIFVCSGNRFPDGAK 5
            +AA +GD  N+ + S N+FP+ A+
Sbjct: 627  EAADKGDLTNLIIISNNQFPEVAR 650


>gb|EOY23169.1| DNA mismatch repair protein MSH3 isoform 1 [Theobroma cacao]
          Length = 1115

 Score =  162 bits (409), Expect = 9e-38
 Identities = 95/204 (46%), Positives = 129/204 (63%)
 Frame = -2

Query: 616  LKLMDHTCTAFGARLFRHWVTHPLCNENMILARLEAVSEFANYMSGVRRKXXXXXXXXXX 437
            L++M+HT T +G+RL RHWVTHPLC+  MI ARL+AVSE A  M     K          
Sbjct: 457  LQIMNHTLTIYGSRLLRHWVTHPLCDRTMISARLDAVSEIALSMGCY--KVSQSIIEIDG 514

Query: 436  XXXXXGAASHSFSEENSCHGIIASVLSSLGKVPDIERGITRIFHQTATSAEFVSVIHSLL 257
                   A   F      + +++SVL+ LG+ PDI+RGITRIFH+TAT AEF++VI ++L
Sbjct: 515  EDSDVTIAQPEF------YSVLSSVLTFLGRSPDIQRGITRIFHRTATPAEFIAVIKAIL 568

Query: 256  TAAKQLERIECIENTNDLSSTNNQMGIFRVQSHLLRRLISCASSSVVIEHATGFLSALNK 77
            +A KQL+R+   E   D  S   ++GI  VQS LL+RLI  ASSS V+ +A   LS LNK
Sbjct: 569  SAGKQLQRLHIDEEHEDNCSKKVRVGI--VQSALLKRLILTASSSNVLGNAAKLLSFLNK 626

Query: 76   DAAVQGDKQNIFVCSGNRFPDGAK 5
            +AA +GD  N+ + S N+FP+ A+
Sbjct: 627  EAADKGDLTNLIIISNNQFPEVAR 650


>ref|XP_004234387.1| PREDICTED: DNA mismatch repair protein MSH3-like [Solanum
            lycopersicum]
          Length = 1117

 Score =  155 bits (391), Expect = 1e-35
 Identities = 95/201 (47%), Positives = 124/201 (61%)
 Frame = -2

Query: 607  MDHTCTAFGARLFRHWVTHPLCNENMILARLEAVSEFANYMSGVRRKXXXXXXXXXXXXX 428
            M+ T T FG+RL RHWVTHPL + NMI ARL+AVSE A  M   R               
Sbjct: 459  MNQTLTLFGSRLLRHWVTHPLRDRNMIGARLDAVSEIAESMQTHRTSHTSVLEME----- 513

Query: 427  XXGAASHSFSEENSCHGIIASVLSSLGKVPDIERGITRIFHQTATSAEFVSVIHSLLTAA 248
                 +   S +   H II SVLS++G+ PDI+RG+TRIFH+ AT+AEF++VI ++L AA
Sbjct: 514  ----GADVTSSQPEIHHIIVSVLSTIGRPPDIQRGLTRIFHRKATAAEFIAVIQAILIAA 569

Query: 247  KQLERIECIENTNDLSSTNNQMGIFRVQSHLLRRLISCASSSVVIEHATGFLSALNKDAA 68
            KQL+R+   E+     STN Q     + S LLR+LIS ASSS VI  A   LSALNK+AA
Sbjct: 570  KQLQRLFITED----RSTNLQRE--TLHSVLLRKLISIASSSTVINGAAKLLSALNKEAA 623

Query: 67   VQGDKQNIFVCSGNRFPDGAK 5
             + D  N+F+ S  +FP+ A+
Sbjct: 624  DRQDLHNLFIISDGKFPEVAE 644


>ref|XP_006353313.1| PREDICTED: DNA mismatch repair protein MSH3-like [Solanum tuberosum]
          Length = 1117

 Score =  154 bits (389), Expect = 2e-35
 Identities = 95/204 (46%), Positives = 126/204 (61%)
 Frame = -2

Query: 616  LKLMDHTCTAFGARLFRHWVTHPLCNENMILARLEAVSEFANYMSGVRRKXXXXXXXXXX 437
            L  M+ T T FG+RL RHWVTHPL + NMI ARL+AVSE A  M   R            
Sbjct: 456  LHCMNQTLTLFGSRLLRHWVTHPLRDRNMIGARLDAVSEIAESMQTHRTSHTSVLEME-- 513

Query: 436  XXXXXGAASHSFSEENSCHGIIASVLSSLGKVPDIERGITRIFHQTATSAEFVSVIHSLL 257
                    +   S +   H II SVLS++G+ PDI+RG+TRIFH+ AT+AEF++VI ++L
Sbjct: 514  -------GADVTSSQPEIHHIIVSVLSTIGRSPDIQRGLTRIFHRKATAAEFIAVIQAIL 566

Query: 256  TAAKQLERIECIENTNDLSSTNNQMGIFRVQSHLLRRLISCASSSVVIEHATGFLSALNK 77
             AAKQL+++  IE+     STN  +    + S LLR+LIS ASSS VI  A   LSALNK
Sbjct: 567  IAAKQLQQLCIIED----KSTN--LPRETLHSVLLRKLISIASSSTVINGAAKLLSALNK 620

Query: 76   DAAVQGDKQNIFVCSGNRFPDGAK 5
            +AA + D  N+F+ S  +FP+ A+
Sbjct: 621  EAADRQDLHNLFIISDGKFPEVAE 644


>ref|XP_002510803.1| DNA mismatch repair protein MSH3, putative [Ricinus communis]
            gi|223549918|gb|EEF51405.1| DNA mismatch repair protein
            MSH3, putative [Ricinus communis]
          Length = 1100

 Score =  154 bits (389), Expect = 2e-35
 Identities = 92/209 (44%), Positives = 123/209 (58%), Gaps = 8/209 (3%)
 Frame = -2

Query: 610  LMDHTCTAFGARLFRHWVTHPLCNENMILARLEAVSEFANYMSGVRRKXXXXXXXXXXXX 431
            +M+HT T  G+RL RHWVTHPLC+ NMI ARL+AVSE A  M   +              
Sbjct: 446  IMNHTLTISGSRLLRHWVTHPLCDRNMISARLDAVSEIAESMGSYKALQN---------- 495

Query: 430  XXXGAASHSFSEENSCHGII--------ASVLSSLGKVPDIERGITRIFHQTATSAEFVS 275
                  +  F EE+S   II        ++VL  LG+ PDI+RGITRIFH+TAT++EF++
Sbjct: 496  ------TGDFDEEDSDVAIIQPDFYHLLSTVLEMLGRSPDIQRGITRIFHRTATASEFIA 549

Query: 274  VIHSLLTAAKQLERIECIENTNDLSSTNNQMGIFRVQSHLLRRLISCASSSVVIEHATGF 95
            VI ++L A KQL R++  E  N     N ++    V+S LL++LI   SSS V+ HA   
Sbjct: 550  VIQAILIAGKQLRRLQIEEEQN-----NKRVQAKTVRSVLLKKLILTVSSSSVVGHAAKL 604

Query: 94   LSALNKDAAVQGDKQNIFVCSGNRFPDGA 8
            LS LNK+AA  GD  N+ V S  +FP+ A
Sbjct: 605  LSTLNKEAAEHGDLTNLIVISNGQFPEVA 633


>ref|XP_004308095.1| PREDICTED: DNA mismatch repair protein MSH3-like [Fragaria vesca
            subsp. vesca]
          Length = 1106

 Score =  154 bits (388), Expect = 2e-35
 Identities = 91/204 (44%), Positives = 123/204 (60%)
 Frame = -2

Query: 616  LKLMDHTCTAFGARLFRHWVTHPLCNENMILARLEAVSEFANYMSGVRRKXXXXXXXXXX 437
            L+ M+HT T  G+RL RHWVTHPLC+ NMI ARL+AVSE A  M   +            
Sbjct: 446  LQCMNHTLTIHGSRLLRHWVTHPLCDRNMISARLDAVSEIAESMGSSKA--------CPI 497

Query: 436  XXXXXGAASHSFSEENSCHGIIASVLSSLGKVPDIERGITRIFHQTATSAEFVSVIHSLL 257
                    SH        + I++SVL++LG+ PDI+RGITRIFH+TAT +EF++VI ++L
Sbjct: 498  IEGDDAEDSHVTILRPEFNYILSSVLTTLGRSPDIQRGITRIFHRTATPSEFIAVIQAIL 557

Query: 256  TAAKQLERIECIENTNDLSSTNNQMGIFRVQSHLLRRLISCASSSVVIEHATGFLSALNK 77
             A KQL++++      D   +   +G   V S LLR+LI  ASSS +I +A   LS LNK
Sbjct: 558  HAGKQLQQLQI-----DEEGSGKTLGGKAVCSELLRKLILTASSSSIIGNAAKLLSTLNK 612

Query: 76   DAAVQGDKQNIFVCSGNRFPDGAK 5
            +AA Q D QN+   S  +FP+ AK
Sbjct: 613  EAADQQDLQNLITISDGQFPEVAK 636


>ref|XP_006827711.1| hypothetical protein AMTR_s00009p00259730 [Amborella trichopoda]
            gi|548832331|gb|ERM95127.1| hypothetical protein
            AMTR_s00009p00259730 [Amborella trichopoda]
          Length = 1092

 Score =  153 bits (387), Expect = 3e-35
 Identities = 92/213 (43%), Positives = 130/213 (61%), Gaps = 9/213 (4%)
 Frame = -2

Query: 616  LKLMDHTCTAFGARLFRHWVTHPLCNENMILARLEAVSEFANYMSGVRRKXXXXXXXXXX 437
            +KLMD+T TAFG+RL +HW+THPL +   ILARL+AVSE A+ +                
Sbjct: 454  IKLMDNTLTAFGSRLLKHWLTHPLRDRISILARLDAVSEIADSI---------------- 497

Query: 436  XXXXXGAASHSFSEENSC---------HGIIASVLSSLGKVPDIERGITRIFHQTATSAE 284
                 GA + + +E   C         + +++SVL++LG+ PD++RGI RIFH+TAT  E
Sbjct: 498  -RVGEGAHNAADNESTDCGAKVVRVELYNLLSSVLTTLGRSPDVQRGIARIFHRTATPKE 556

Query: 283  FVSVIHSLLTAAKQLERIECIENTNDLSSTNNQMGIFRVQSHLLRRLISCASSSVVIEHA 104
            F++VIH+LL A+KQL+R++  E +N+        G    +S LLRRLI  ASS  V  HA
Sbjct: 557  FIAVIHALLCASKQLQRLDLGEESNE--------GPTSPRSDLLRRLILTASSLKVTSHA 608

Query: 103  TGFLSALNKDAAVQGDKQNIFVCSGNRFPDGAK 5
               LSALNKDAA  GD  N+F+ S ++F + A+
Sbjct: 609  AKLLSALNKDAADLGDINNLFIASNDKFQEVAR 641


>gb|EMT16743.1| DNA mismatch repair protein Msh3 [Aegilops tauschii]
          Length = 858

 Score =  153 bits (387), Expect = 3e-35
 Identities = 92/201 (45%), Positives = 128/201 (63%)
 Frame = -2

Query: 607 MDHTCTAFGARLFRHWVTHPLCNENMILARLEAVSEFANYMSGVRRKXXXXXXXXXXXXX 428
           M++TCTAFG+RLFRHW+THPLC+ N+I AR +A+SE +  M G R+              
Sbjct: 207 MNNTCTAFGSRLFRHWLTHPLCDRNLICARHDAISEISESM-GSRQDSVSIRQDEGDGCC 265

Query: 427 XXGAASHSFSEENSCHGIIASVLSSLGKVPDIERGITRIFHQTATSAEFVSVIHSLLTAA 248
              A S           I++SVL+ LG+  D +RGITRIFH  AT+ EFV VI ++LTA 
Sbjct: 266 AASARS-------DLSTILSSVLTMLGRSLDSQRGITRIFHCKATAKEFVGVIQAVLTAG 318

Query: 247 KQLERIECIENTNDLSSTNNQMGIFRVQSHLLRRLISCASSSVVIEHATGFLSALNKDAA 68
           K+L ++  +E+T+++SS +       V S LLRRLIS ASSS V+ +A   LS L+KDAA
Sbjct: 319 KELRKL-VLEDTDNVSSQHR-----TVHSSLLRRLISTASSSAVLANAVKLLSCLDKDAA 372

Query: 67  VQGDKQNIFVCSGNRFPDGAK 5
            QGD  N+F+ S ++FP+ A+
Sbjct: 373 DQGDMINLFISSVDQFPEVAE 393


>ref|XP_002263286.2| PREDICTED: DNA mismatch repair protein Msh3-like [Vitis vinifera]
          Length = 1137

 Score =  153 bits (386), Expect = 4e-35
 Identities = 87/204 (42%), Positives = 122/204 (59%)
 Frame = -2

Query: 616  LKLMDHTCTAFGARLFRHWVTHPLCNENMILARLEAVSEFANYMSGVRRKXXXXXXXXXX 437
            L  M+HT T FG+RL RHWV+HPLC+ NMI ARL+AVSE    M   +            
Sbjct: 453  LHTMNHTLTIFGSRLLRHWVSHPLCDSNMISARLDAVSEIVMSMGSCKASQNFGGIDEGD 512

Query: 436  XXXXXGAASHSFSEENSCHGIIASVLSSLGKVPDIERGITRIFHQTATSAEFVSVIHSLL 257
                      ++        +++SVL++LG+ PDI+RG+TRIFH+TAT++EF+SV  ++L
Sbjct: 513  SDVTYVQPEVNY--------LLSSVLTTLGRSPDIQRGLTRIFHRTATASEFISVTQAIL 564

Query: 256  TAAKQLERIECIENTNDLSSTNNQMGIFRVQSHLLRRLISCASSSVVIEHATGFLSALNK 77
             A KQL+R+   E   D    +       V+S LLR+LI  ASSS +I +A   LS LNK
Sbjct: 565  FAGKQLQRLHIEEKDVDEKGQSRS-----VRSVLLRKLILTASSSGIIGNAAKLLSTLNK 619

Query: 76   DAAVQGDKQNIFVCSGNRFPDGAK 5
            +AA +GD  N+F+ S  +FP+ AK
Sbjct: 620  EAADKGDLPNLFIISSGQFPEVAK 643


>ref|XP_004960023.1| PREDICTED: LOW QUALITY PROTEIN: DNA mismatch repair protein MSH3-like
            [Setaria italica]
          Length = 1104

 Score =  152 bits (383), Expect = 9e-35
 Identities = 93/201 (46%), Positives = 125/201 (62%)
 Frame = -2

Query: 607  MDHTCTAFGARLFRHWVTHPLCNENMILARLEAVSEFANYMSGVRRKXXXXXXXXXXXXX 428
            M++TCTAFG+RLFR+W+THPLC+ + I AR +AVSE +  M G R               
Sbjct: 451  MNNTCTAFGSRLFRNWLTHPLCDRHRICARHDAVSEISESM-GSRHSINNLQDGGD---- 505

Query: 427  XXGAASHSFSEENSCHGIIASVLSSLGKVPDIERGITRIFHQTATSAEFVSVIHSLLTAA 248
                 S +    +    I++SVL  LGK  DI+RGITRIFH  AT+ EFV VIHS+LTA 
Sbjct: 506  ----GSCAALARSDLSTILSSVLEMLGKSLDIQRGITRIFHCKATAKEFVGVIHSILTAG 561

Query: 247  KQLERIECIENTNDLSSTNNQMGIFRVQSHLLRRLISCASSSVVIEHATGFLSALNKDAA 68
            KQ++++  +E+ + +SS +       V S LLRRLIS ASSS V+  A   LS LNK+AA
Sbjct: 562  KQMQKL-VLEDIDIVSSQHKP-----VHSSLLRRLISTASSSTVLNTAVKLLSCLNKEAA 615

Query: 67   VQGDKQNIFVCSGNRFPDGAK 5
             QGD  N+F+ S + FP+ A+
Sbjct: 616  DQGDMLNLFIASVDNFPEVAE 636


>ref|XP_001758062.1| predicted protein [Physcomitrella patens] gi|162690939|gb|EDQ77304.1|
            predicted protein [Physcomitrella patens]
          Length = 1109

 Score =  150 bits (379), Expect = 3e-34
 Identities = 89/205 (43%), Positives = 119/205 (58%)
 Frame = -2

Query: 616  LKLMDHTCTAFGARLFRHWVTHPLCNENMILARLEAVSEFANYMSGVRRKXXXXXXXXXX 437
            L LMDHT T FGARL RHWVTHPL +E +I ARL+AV+E A  M  V             
Sbjct: 458  LWLMDHTHTLFGARLMRHWVTHPLQDEGLIAARLDAVTEIAESMGSV----------GVA 507

Query: 436  XXXXXGAASHSFSEENSCHGIIASVLSSLGKVPDIERGITRIFHQTATSAEFVSVIHSLL 257
                    S          G++ S+L SLGK+PD+ERGITRIF +TAT+AEFVSV+  L+
Sbjct: 508  QGHGSFPGSGRGGGNVGKQGLLVSLLMSLGKLPDVERGITRIFLRTATAAEFVSVVQGLI 567

Query: 256  TAAKQLERIECIENTNDLSSTNNQMGIFRVQSHLLRRLISCASSSVVIEHATGFLSALNK 77
             A++QL ++      +D+    + +    V+S L+RRL++ ASS  V E A   LS+L+ 
Sbjct: 568  KASRQLRQLHFDHKDSDMEL--DDVHPKSVKSSLMRRLVAAASSVSVSEPAAQLLSSLDT 625

Query: 76   DAAVQGDKQNIFVCSGNRFPDGAKC 2
            DAA  GDK  +F C   +FP+   C
Sbjct: 626  DAAASGDKLKLFHCRDGKFPEVKNC 650


>ref|NP_001054300.1| Os04g0682900 [Oryza sativa Japonica Group]
           gi|113565871|dbj|BAF16214.1| Os04g0682900 [Oryza sativa
           Japonica Group]
          Length = 813

 Score =  149 bits (377), Expect = 5e-34
 Identities = 88/201 (43%), Positives = 123/201 (61%)
 Frame = -2

Query: 607 MDHTCTAFGARLFRHWVTHPLCNENMILARLEAVSEFANYMSGVRRKXXXXXXXXXXXXX 428
           M++TCTAFG+RLFRHW+THPLC+ N I  R +AVSE +  +   +               
Sbjct: 439 MNNTCTAFGSRLFRHWLTHPLCDRNQICTRHDAVSEISESIGSQQYSTNNLQDEVD---- 494

Query: 427 XXGAASHSFSEENSCHGIIASVLSSLGKVPDIERGITRIFHQTATSAEFVSVIHSLLTAA 248
                S S S  +    I++SVL  L    DI+RGITRIFH  AT+ EFV V+ ++LTA 
Sbjct: 495 ----MSCSSSVRSDLSTILSSVLRMLAGTLDIQRGITRIFHCKATAKEFVGVVQAILTAG 550

Query: 247 KQLERIECIENTNDLSSTNNQMGIFRVQSHLLRRLISCASSSVVIEHATGFLSALNKDAA 68
           KQL+++  +E+T+ +SS +       V S LLRRLI+ ASS  V+ +A   +S LNKDAA
Sbjct: 551 KQLQKL-VLEDTDTMSSQHR-----TVHSPLLRRLINTASSCTVLANAATLVSCLNKDAA 604

Query: 67  VQGDKQNIFVCSGNRFPDGAK 5
            QGD  N+F+ S ++FP+ A+
Sbjct: 605 DQGDMLNLFIASVDQFPEVAE 625


>emb|CAE03438.1| OSJNBa0032F06.21 [Oryza sativa Japonica Group]
          Length = 1085

 Score =  149 bits (377), Expect = 5e-34
 Identities = 88/201 (43%), Positives = 123/201 (61%)
 Frame = -2

Query: 607 MDHTCTAFGARLFRHWVTHPLCNENMILARLEAVSEFANYMSGVRRKXXXXXXXXXXXXX 428
           M++TCTAFG+RLFRHW+THPLC+ N I  R +AVSE +  +   +               
Sbjct: 439 MNNTCTAFGSRLFRHWLTHPLCDRNQICTRHDAVSEISESIGSQQYSTNNLQDEVD---- 494

Query: 427 XXGAASHSFSEENSCHGIIASVLSSLGKVPDIERGITRIFHQTATSAEFVSVIHSLLTAA 248
                S S S  +    I++SVL  L    DI+RGITRIFH  AT+ EFV V+ ++LTA 
Sbjct: 495 ----MSCSSSVRSDLSTILSSVLRMLAGTLDIQRGITRIFHCKATAKEFVGVVQAILTAG 550

Query: 247 KQLERIECIENTNDLSSTNNQMGIFRVQSHLLRRLISCASSSVVIEHATGFLSALNKDAA 68
           KQL+++  +E+T+ +SS +       V S LLRRLI+ ASS  V+ +A   +S LNKDAA
Sbjct: 551 KQLQKL-VLEDTDTMSSQHR-----TVHSPLLRRLINTASSCTVLANAATLVSCLNKDAA 604

Query: 67  VQGDKQNIFVCSGNRFPDGAK 5
            QGD  N+F+ S ++FP+ A+
Sbjct: 605 DQGDMLNLFIASVDQFPEVAE 625


>ref|XP_006283020.1| hypothetical protein CARUB_v10004012mg [Capsella rubella]
            gi|482551725|gb|EOA15918.1| hypothetical protein
            CARUB_v10004012mg [Capsella rubella]
          Length = 1182

 Score =  145 bits (366), Expect = 9e-33
 Identities = 83/202 (41%), Positives = 123/202 (60%), Gaps = 1/202 (0%)
 Frame = -2

Query: 607  MDHTCTAFGARLFRHWVTHPLCNENMILARLEAVSEFANYMSGVRRKXXXXXXXXXXXXX 428
            M+HT T +G+RL RHWVTHPLCN N+I ARL+AVSE A  M                   
Sbjct: 538  MNHTLTVYGSRLLRHWVTHPLCNRNVISARLDAVSEIAACMGS--------HSSSQNSDE 589

Query: 427  XXGAASHSFSEENSCHGIIASVLSSLGKVPDIERGITRIFHQTATSAEFVSVIHSLLTAA 248
                 S    E +  + +++SVL++L +  DI+RGITRIFH+TA ++EF++V+ ++L A 
Sbjct: 590  LVEEGSERTMESSEFYLVLSSVLTTLSRSSDIQRGITRIFHRTAKASEFIAVMEAILLAG 649

Query: 247  KQLERIECIENTN-DLSSTNNQMGIFRVQSHLLRRLISCASSSVVIEHATGFLSALNKDA 71
            K L+R+   ++    + ST+       VQS LLR+LIS  SS  V+++A   LS+LNK+ 
Sbjct: 650  KHLKRLGLKQDCEMSMQSTS-------VQSSLLRKLISVVSSVTVVDNAAKLLSSLNKEG 702

Query: 70   AVQGDKQNIFVCSGNRFPDGAK 5
            AV+GD  +I + S  +FP+ A+
Sbjct: 703  AVRGDLLDILITSSGQFPELAE 724


>gb|EXC15971.1| DNA mismatch repair protein Msh3 [Morus notabilis]
          Length = 1080

 Score =  144 bits (363), Expect = 2e-32
 Identities = 89/207 (42%), Positives = 122/207 (58%), Gaps = 3/207 (1%)
 Frame = -2

Query: 616  LKLMDHTCTAFGARLFRHWVTHPLCNENMILARLEAVSEFANYMSGVRRKXXXXXXXXXX 437
            L+ M+ T T FG+RL RHWVTHPLC+ NMI ARL+AVSE    M   +            
Sbjct: 437  LQSMNRTITTFGSRLLRHWVTHPLCDRNMITARLDAVSEIGESMGSSQAS----QNIEDL 492

Query: 436  XXXXXGAASHSFSEENSCHGIIASVLSSLGKVPDIERGITRIFHQTATSAEFVSVIHSLL 257
                    SH          +++SVL++LG+VPDI+RGITRIFH+T T  EF++VI ++L
Sbjct: 493  AVVIRPEISH----------VLSSVLTTLGRVPDIQRGITRIFHRTTTPTEFIAVIQAIL 542

Query: 256  TAAKQLERIECIENTNDLSSTNNQMGIFR---VQSHLLRRLISCASSSVVIEHATGFLSA 86
             A KQL+++   E   +        G FR   V+S LLR+LI  ASS  VI +A   LS+
Sbjct: 543  YAGKQLQQLHNEEEEEEEEGD----GKFRAKIVRSELLRKLILTASSPTVIRNAAKLLSS 598

Query: 85   LNKDAAVQGDKQNIFVCSGNRFPDGAK 5
            LN +AA Q D QN+ + +G +FP+ A+
Sbjct: 599  LNNEAADQRDLQNLIISNG-QFPEVAE 624


>ref|XP_006653893.1| PREDICTED: DNA mismatch repair protein MSH3-like, partial [Oryza
           brachyantha]
          Length = 894

 Score =  144 bits (363), Expect = 2e-32
 Identities = 86/201 (42%), Positives = 121/201 (60%)
 Frame = -2

Query: 607 MDHTCTAFGARLFRHWVTHPLCNENMILARLEAVSEFANYMSGVRRKXXXXXXXXXXXXX 428
           +++TCTA G+RLFRHW+THPLC+ N I AR +AVSE +  +   R               
Sbjct: 246 INNTCTASGSRLFRHWLTHPLCDRNQICARHDAVSEISESIGSQRYSINNPQDEED---- 301

Query: 427 XXGAASHSFSEENSCHGIIASVLSSLGKVPDIERGITRIFHQTATSAEFVSVIHSLLTAA 248
                S   S  +    I++SVL  L    D++RGITRIFH  AT+ EFV VI ++LTA 
Sbjct: 302 ----RSCPSSVRSDLSTILSSVLRMLAGTLDVQRGITRIFHCKATAKEFVGVIQAILTAG 357

Query: 247 KQLERIECIENTNDLSSTNNQMGIFRVQSHLLRRLISCASSSVVIEHATGFLSALNKDAA 68
           KQL+++  + +T+ +SS +       V S LLRRLI+ ASS  V+ +A   +S LNKDAA
Sbjct: 358 KQLQKL-VLHDTDTMSSQHR-----TVHSPLLRRLINTASSCTVLANAVKLVSCLNKDAA 411

Query: 67  VQGDKQNIFVCSGNRFPDGAK 5
            QGD  N+F+ S ++FP+ A+
Sbjct: 412 DQGDMLNLFIASVDQFPEVAE 432


>ref|XP_004168537.1| PREDICTED: DNA mismatch repair protein MSH3-like [Cucumis sativus]
          Length = 966

 Score =  143 bits (361), Expect = 3e-32
 Identities = 86/208 (41%), Positives = 123/208 (59%), Gaps = 4/208 (1%)
 Frame = -2

Query: 616  LKLMDHTCTAFGARLFRHWVTHPLCNENMILARLEAVSEFANYMSGVRRKXXXXXXXXXX 437
            L  M+HT T FG+RL R W+THPLC+ NMI+AR EAVSE A  M   +            
Sbjct: 471  LHCMNHTLTIFGSRLLRQWITHPLCDRNMIIARQEAVSEIAASMVSSK------------ 518

Query: 436  XXXXXGAASHSFSE----ENSCHGIIASVLSSLGKVPDIERGITRIFHQTATSAEFVSVI 269
                  A    +S+    E   + I++SVL++LG+ PDI+RGITRIFH+TA  +EF++VI
Sbjct: 519  VSPNNRALDEEYSDVIVIEPELNYILSSVLTTLGRAPDIQRGITRIFHRTAAPSEFIAVI 578

Query: 268  HSLLTAAKQLERIECIENTNDLSSTNNQMGIFRVQSHLLRRLISCASSSVVIEHATGFLS 89
             ++L A KQL++    E  ++ SS +       + S LLR+LI  ASSS +I  A   LS
Sbjct: 579  QAILFAGKQLQQFHIDEEDDNCSSES------IIGSKLLRKLILSASSSGLINIAAKLLS 632

Query: 88   ALNKDAAVQGDKQNIFVCSGNRFPDGAK 5
             ++K+AA QGD  N+ +   ++FP  A+
Sbjct: 633  TISKEAADQGDFPNLMIIYSDQFPKVAR 660


>ref|XP_004140847.1| PREDICTED: DNA mismatch repair protein MSH3-like [Cucumis sativus]
          Length = 1094

 Score =  143 bits (361), Expect = 3e-32
 Identities = 86/208 (41%), Positives = 123/208 (59%), Gaps = 4/208 (1%)
 Frame = -2

Query: 616  LKLMDHTCTAFGARLFRHWVTHPLCNENMILARLEAVSEFANYMSGVRRKXXXXXXXXXX 437
            L  M+HT T FG+RL R W+THPLC+ NMI+AR EAVSE A  M   +            
Sbjct: 454  LHCMNHTLTIFGSRLLRQWITHPLCDRNMIIARQEAVSEIAASMVSSK------------ 501

Query: 436  XXXXXGAASHSFSE----ENSCHGIIASVLSSLGKVPDIERGITRIFHQTATSAEFVSVI 269
                  A    +S+    E   + I++SVL++LG+ PDI+RGITRIFH+TA  +EF++VI
Sbjct: 502  VSPNNRALDEEYSDVIVIEPELNYILSSVLTTLGRAPDIQRGITRIFHRTAAPSEFIAVI 561

Query: 268  HSLLTAAKQLERIECIENTNDLSSTNNQMGIFRVQSHLLRRLISCASSSVVIEHATGFLS 89
             ++L A KQL++    E  ++ SS +       + S LLR+LI  ASSS +I  A   LS
Sbjct: 562  QAILFAGKQLQQFHIDEEDDNCSSES------IIGSKLLRKLILSASSSGLINIAAKLLS 615

Query: 88   ALNKDAAVQGDKQNIFVCSGNRFPDGAK 5
             ++K+AA QGD  N+ +   ++FP  A+
Sbjct: 616  TISKEAADQGDFPNLMIIYSDQFPKVAR 643


>ref|XP_006490371.1| PREDICTED: DNA mismatch repair protein MSH3-like [Citrus sinensis]
          Length = 1087

 Score =  143 bits (360), Expect = 4e-32
 Identities = 84/204 (41%), Positives = 120/204 (58%)
 Frame = -2

Query: 616  LKLMDHTCTAFGARLFRHWVTHPLCNENMILARLEAVSEFANYMSGVRRKXXXXXXXXXX 437
            L +M+HT T +G+RL R WVTHPLC+ N+I ARL+AVSE A  M   R            
Sbjct: 433  LHIMNHTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKN 492

Query: 436  XXXXXGAASHSFSEENSCHGIIASVLSSLGKVPDIERGITRIFHQTATSAEFVSVIHSLL 257
                    S     E   + I++SVL+SLG+ PDI+RGITRIFH+TAT +EF++V+ ++L
Sbjct: 493  --------SDVTIVEPQFYYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAIL 544

Query: 256  TAAKQLERIECIENTNDLSSTNNQMGIFRVQSHLLRRLISCASSSVVIEHATGFLSALNK 77
             A KQL++++      +  ++        + S LL+RLI  ASS  VI  A   LS +NK
Sbjct: 545  YAGKQLQQLQIDGEYREKVTSKT------LHSALLKRLILTASSPAVIGKAAKLLSTVNK 598

Query: 76   DAAVQGDKQNIFVCSGNRFPDGAK 5
            +AA QGD  N+ + S  +F + A+
Sbjct: 599  EAADQGDLLNLMIISNGQFSEVAR 622


>ref|NP_194284.2| DNA mismatch repair protein MSH3 [Arabidopsis thaliana]
            gi|12644077|sp|O65607.2|MSH3_ARATH RecName: Full=DNA
            mismatch repair protein MSH3; Short=AtMSH3; AltName:
            Full=MutS protein homolog 3 gi|3319876|emb|CAA07684.1|
            Msh3 protein [Arabidopsis thaliana]
            gi|332659675|gb|AEE85075.1| DNA mismatch repair protein
            MSH3 [Arabidopsis thaliana]
          Length = 1081

 Score =  142 bits (359), Expect = 6e-32
 Identities = 86/209 (41%), Positives = 127/209 (60%), Gaps = 8/209 (3%)
 Frame = -2

Query: 607  MDHTCTAFGARLFRHWVTHPLCNENMILARLEAVSEFANYMSGVRRKXXXXXXXXXXXXX 428
            M+HT T +G+RL RHWVTHPLC+ N+I ARL+AVSE +  M                   
Sbjct: 449  MNHTLTVYGSRLLRHWVTHPLCDRNLISARLDAVSEISACMGS----------------H 492

Query: 427  XXGAASHSFSEENSCHGII--------ASVLSSLGKVPDIERGITRIFHQTATSAEFVSV 272
                 S    EE S   I+        +SVL+++ +  DI+RGITRIFH+TA + EF++V
Sbjct: 493  SSSQLSSELVEEGSERAIVSPEFYLVLSSVLTAMSRSSDIQRGITRIFHRTAKATEFIAV 552

Query: 271  IHSLLTAAKQLERIECIENTNDLSSTNNQMGIFRVQSHLLRRLISCASSSVVIEHATGFL 92
            + ++L A KQ++R+  I+  +++ S    M    V+S LLR+LIS  SS VV+++A   L
Sbjct: 553  MEAILLAGKQIQRLG-IKQDSEMRS----MQSATVRSTLLRKLISVISSPVVVDNAGKLL 607

Query: 91   SALNKDAAVQGDKQNIFVCSGNRFPDGAK 5
            SALNK+AAV+GD  +I + S ++FP+ A+
Sbjct: 608  SALNKEAAVRGDLLDILITSSDQFPELAE 636