BLASTX nr result

ID: Ephedra25_contig00028109 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra25_contig00028109
         (496 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_001776742.1| predicted protein [Physcomitrella patens] gi...    86   4e-15
ref|XP_001779547.1| predicted protein [Physcomitrella patens] gi...    82   6e-14
ref|XP_002968169.1| hypothetical protein SELMODRAFT_440341 [Sela...    79   6e-13
ref|XP_002970399.1| hypothetical protein SELMODRAFT_411392 [Sela...    79   6e-13

>ref|XP_001776742.1| predicted protein [Physcomitrella patens] gi|162671891|gb|EDQ58436.1|
            predicted protein [Physcomitrella patens]
          Length = 1414

 Score = 86.3 bits (212), Expect = 4e-15
 Identities = 57/147 (38%), Positives = 79/147 (53%), Gaps = 3/147 (2%)
 Frame = -1

Query: 493  VSGIRSGLRRIVYDILLSYPHGISCDDFEGVFFNETGKTLTDVLREHAYSTPISECMIHD 314
            V+GIRSGLRRIVY+IL ++   +  D  E +     G+ L +VL +H Y T   ECM+HD
Sbjct: 723  VAGIRSGLRRIVYEILRTH-QWLHLDTIESLCEGAIGQPLHEVLIDHGYHTASVECMLHD 781

Query: 313  MLDIACILLSGSHTLFSLCKDAEDPSLTDGLLLGRS---RKSTSNSGPFHYLSGETSVCA 143
            M DIA +      T   LCK AEDP+LTDG LL +S   R     +G       E S C 
Sbjct: 782  MPDIAHLDERAEQTRVYLCKGAEDPALTDGFLLRQSIQERSFVGLAGSISQFHREVSGC- 840

Query: 142  DTKAEMPSHIASSKDLADEGEDANASS 62
              K+++  H+  ++   D+ +    SS
Sbjct: 841  --KSDL--HVEENQQSPDDDDTDERSS 863


>ref|XP_001779547.1| predicted protein [Physcomitrella patens]
           gi|162669028|gb|EDQ55623.1| predicted protein
           [Physcomitrella patens]
          Length = 871

 Score = 82.4 bits (202), Expect = 6e-14
 Identities = 47/96 (48%), Positives = 60/96 (62%)
 Frame = -1

Query: 493 VSGIRSGLRRIVYDILLSYPHGISCDDFEGVFFNETGKTLTDVLREHAYSTPISECMIHD 314
           V GIRSGLRR+VYD+L S   GI  +  EG+     G+ L +VL +H Y T   ECM+ D
Sbjct: 114 VGGIRSGLRRVVYDVL-SVHRGIYINAVEGLCDQLIGQPLKEVLVDHGYHTASVECMLRD 172

Query: 313 MLDIACILLSGSHTLFSLCKDAEDPSLTDGLLLGRS 206
           M DIA +  S       LC +AEDP+LTDGLL+ R+
Sbjct: 173 MPDIAFLDESKEMIRVYLCNEAEDPALTDGLLIRRT 208


>ref|XP_002968169.1| hypothetical protein SELMODRAFT_440341 [Selaginella moellendorffii]
           gi|300163813|gb|EFJ30423.1| hypothetical protein
           SELMODRAFT_440341 [Selaginella moellendorffii]
          Length = 745

 Score = 79.0 bits (193), Expect = 6e-13
 Identities = 48/112 (42%), Positives = 64/112 (57%), Gaps = 5/112 (4%)
 Frame = -1

Query: 493 VSGIRSGLRRIVYDILLSYPHGISCDDFEGVFFNETGKTLTDVLREHAYSTPISECMIHD 314
           V+GIRSGLRRIV+ +L  YP G+S    +        + L+ VL E  Y TP  ECM+ D
Sbjct: 154 VAGIRSGLRRIVFHVLRQYPKGVSAGILDEECSKLLARPLSVVLSELTYDTPNVECMVRD 213

Query: 313 MLDIAC---ILLSGSHTLFSLCKDAEDPSLTDGLLLG--RSRKSTSNSGPFH 173
           M DIA    +   G   +F L  +AEDP+LTDG+L+G  R   S+  +G  H
Sbjct: 214 MADIASFRQLSTPGGSRVF-LSSEAEDPTLTDGILVGVPRLHHSSKENGDSH 264


>ref|XP_002970399.1| hypothetical protein SELMODRAFT_411392 [Selaginella moellendorffii]
           gi|300161915|gb|EFJ28529.1| hypothetical protein
           SELMODRAFT_411392 [Selaginella moellendorffii]
          Length = 747

 Score = 79.0 bits (193), Expect = 6e-13
 Identities = 48/112 (42%), Positives = 64/112 (57%), Gaps = 5/112 (4%)
 Frame = -1

Query: 493 VSGIRSGLRRIVYDILLSYPHGISCDDFEGVFFNETGKTLTDVLREHAYSTPISECMIHD 314
           V+GIRSGLRRIV+ +L  YP G+S    +        + L+ VL E  Y TP  ECM+ D
Sbjct: 154 VAGIRSGLRRIVFHVLRQYPKGVSAGILDEECSKLLARPLSVVLSELTYDTPNVECMVRD 213

Query: 313 MLDIAC---ILLSGSHTLFSLCKDAEDPSLTDGLLLG--RSRKSTSNSGPFH 173
           M DIA    +   G   +F L  +AEDP+LTDG+L+G  R   S+  +G  H
Sbjct: 214 MADIASFRQLSTPGGSRVF-LSSEAEDPTLTDGILVGVPRLHHSSKENGDSH 264


Top