BLASTX nr result
ID: Ephedra25_contig00027811
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra25_contig00027811
(538 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002974049.1| hypothetical protein SELMODRAFT_232193 [Sela... 92 1e-20
ref|XP_006279895.1| hypothetical protein CARUB_v10025741mg [Caps... 93 1e-20
ref|XP_002983441.1| hypothetical protein SELMODRAFT_234261 [Sela... 92 1e-20
ref|XP_001779379.1| predicted protein [Physcomitrella patens] gi... 93 4e-20
ref|XP_002983525.1| hypothetical protein SELMODRAFT_422725 [Sela... 88 1e-19
ref|XP_006393908.1| hypothetical protein EUTSA_v10003515mg [Eutr... 89 2e-19
ref|XP_002866717.1| hypothetical protein ARALYDRAFT_332862 [Arab... 89 2e-19
ref|XP_006847112.1| hypothetical protein AMTR_s00017p00221560 [A... 88 2e-19
ref|NP_201511.2| DNA polymerase alpha catalytic subunit [Arabido... 89 2e-19
dbj|BAB10944.1| DNA polymerase alpha 1 [Arabidopsis thaliana] 89 2e-19
ref|NP_001266164.1| DNA polymerase alpha catalytic subunit [Sola... 86 3e-19
ref|XP_004289559.1| PREDICTED: DNA polymerase alpha catalytic su... 84 7e-19
ref|XP_002865605.1| predicted protein [Arabidopsis lyrata subsp.... 87 7e-19
ref|XP_002865689.1| predicted protein [Arabidopsis lyrata subsp.... 86 2e-18
ref|XP_006339883.1| PREDICTED: DNA polymerase alpha catalytic su... 86 2e-18
ref|XP_002277947.2| PREDICTED: DNA polymerase alpha catalytic su... 82 3e-18
ref|XP_002872345.1| hypothetical protein ARALYDRAFT_327035 [Arab... 85 4e-18
ref|XP_002310719.2| hypothetical protein POPTR_0007s10880g [Popu... 83 8e-18
ref|XP_006466591.1| PREDICTED: DNA polymerase alpha catalytic su... 82 1e-17
gb|EXB54380.1| DNA polymerase alpha catalytic subunit [Morus not... 83 2e-17
>ref|XP_002974049.1| hypothetical protein SELMODRAFT_232193 [Selaginella moellendorffii]
gi|300158381|gb|EFJ25004.1| hypothetical protein
SELMODRAFT_232193 [Selaginella moellendorffii]
Length = 1419
Score = 91.7 bits (226), Expect(2) = 1e-20
Identities = 52/99 (52%), Positives = 59/99 (59%)
Frame = +1
Query: 100 MIDCAETDAWLSFGLMFHVSVLPLTCQLTNLSGNLESKTLMVSRKM*SLCALSYIYIR** 279
+I ETDAWLS LMFH+SVLPLT QLTN+SGNL SKTL
Sbjct: 718 LIQSGETDAWLSLSLMFHLSVLPLTRQLTNISGNLWSKTLQ------------------- 758
Query: 280 L*FDAL*GARAQRVENFLLHEFYN*KYILPDKLSIKERK 396
GARAQRVE LLHEFY KYI+PDK+S E++
Sbjct: 759 -------GARAQRVEYLLLHEFYGRKYIVPDKVSASEKE 790
Score = 33.9 bits (76), Expect(2) = 1e-20
Identities = 15/33 (45%), Positives = 22/33 (66%), Gaps = 3/33 (9%)
Frame = +2
Query: 449 EATYEDDIDP---INVKSKKGPTYSGDLVLEPK 538
+A ++D +P + K+KK P Y+G LVLEPK
Sbjct: 799 KAQQDEDFEPDSAVEAKNKKAPAYTGGLVLEPK 831
>ref|XP_006279895.1| hypothetical protein CARUB_v10025741mg [Capsella rubella]
gi|482548599|gb|EOA12793.1| hypothetical protein
CARUB_v10025741mg [Capsella rubella]
Length = 1478
Score = 93.2 bits (230), Expect(2) = 1e-20
Identities = 55/101 (54%), Positives = 62/101 (61%), Gaps = 2/101 (1%)
Frame = +1
Query: 100 MIDCAETDAWLSFGLMFHVSVLPLTCQLTNLSGNLESKTLMVSRKM*SLCALSYIYIR** 279
+I+C ETDAWLS LMFH+SVLPLT QLTN+SGNL KTL
Sbjct: 740 LIECGETDAWLSMELMFHLSVLPLTLQLTNISGNLWGKTLQ------------------- 780
Query: 280 L*FDAL*GARAQRVENFLLHEFYN*KYILPDKLS--IKERK 396
GARAQR E +LLH F++ KYILPDKLS IKERK
Sbjct: 781 -------GARAQRNEYYLLHTFHSKKYILPDKLSQHIKERK 814
Score = 32.0 bits (71), Expect(2) = 1e-20
Identities = 13/17 (76%), Positives = 15/17 (88%)
Frame = +2
Query: 488 KSKKGPTYSGDLVLEPK 538
K+KKGP Y+G LVLEPK
Sbjct: 847 KTKKGPAYAGGLVLEPK 863
>ref|XP_002983441.1| hypothetical protein SELMODRAFT_234261 [Selaginella moellendorffii]
gi|300148684|gb|EFJ15342.1| hypothetical protein
SELMODRAFT_234261 [Selaginella moellendorffii]
Length = 1386
Score = 91.7 bits (226), Expect(2) = 1e-20
Identities = 52/99 (52%), Positives = 59/99 (59%)
Frame = +1
Query: 100 MIDCAETDAWLSFGLMFHVSVLPLTCQLTNLSGNLESKTLMVSRKM*SLCALSYIYIR** 279
+I ETDAWLS LMFH+SVLPLT QLTN+SGNL SKTL
Sbjct: 718 LIQSGETDAWLSLSLMFHLSVLPLTRQLTNISGNLWSKTLQ------------------- 758
Query: 280 L*FDAL*GARAQRVENFLLHEFYN*KYILPDKLSIKERK 396
GARAQRVE LLHEFY KYI+PDK+S E++
Sbjct: 759 -------GARAQRVEYLLLHEFYGRKYIVPDKVSASEKE 790
Score = 33.5 bits (75), Expect(2) = 1e-20
Identities = 15/32 (46%), Positives = 21/32 (65%), Gaps = 3/32 (9%)
Frame = +2
Query: 452 ATYEDDIDP---INVKSKKGPTYSGDLVLEPK 538
A ++D +P + K+KK P Y+G LVLEPK
Sbjct: 800 AQQDEDFEPDSAVEAKNKKAPAYTGGLVLEPK 831
>ref|XP_001779379.1| predicted protein [Physcomitrella patens]
gi|162669177|gb|EDQ55769.1| predicted protein
[Physcomitrella patens]
Length = 1231
Score = 93.2 bits (230), Expect(2) = 4e-20
Identities = 57/106 (53%), Positives = 65/106 (61%), Gaps = 1/106 (0%)
Frame = +1
Query: 100 MIDCAETDAWLSFGLMFHVSVLPLTCQLTNLSGNLESKTLMVSRKM*SLCALSYIYIR** 279
+I+ ETDAWLS GLMFH+SVLPLT QLTN+SGNL S+TL
Sbjct: 485 LIESGETDAWLSLGLMFHLSVLPLTRQLTNISGNLWSRTLQ------------------- 525
Query: 280 L*FDAL*GARAQRVENFLLHEFYN*KYILPDKLSIKER-KHVFKAK 414
GARAQRVE LLHEF+ K+ILPDKLS KE+ K V K K
Sbjct: 526 -------GARAQRVEYLLLHEFHIRKFILPDKLSQKEKEKEVGKRK 564
Score = 30.4 bits (67), Expect(2) = 4e-20
Identities = 13/17 (76%), Positives = 13/17 (76%)
Frame = +2
Query: 488 KSKKGPTYSGDLVLEPK 538
K KKGP Y G LVLEPK
Sbjct: 594 KGKKGPAYLGGLVLEPK 610
>ref|XP_002983525.1| hypothetical protein SELMODRAFT_422725 [Selaginella moellendorffii]
gi|300148768|gb|EFJ15426.1| hypothetical protein
SELMODRAFT_422725 [Selaginella moellendorffii]
Length = 935
Score = 88.2 bits (217), Expect(2) = 1e-19
Identities = 50/99 (50%), Positives = 59/99 (59%)
Frame = +1
Query: 100 MIDCAETDAWLSFGLMFHVSVLPLTCQLTNLSGNLESKTLMVSRKM*SLCALSYIYIR** 279
+I ETDAWLS LMFH+SVLPLT QLTN++GNL SKTL
Sbjct: 425 LIQSGETDAWLSLSLMFHLSVLPLTRQLTNINGNLWSKTLQ------------------- 465
Query: 280 L*FDAL*GARAQRVENFLLHEFYN*KYILPDKLSIKERK 396
GARAQRV+ LLHEFY KYI+PDK+S E++
Sbjct: 466 -------GARAQRVQYLLLHEFYGRKYIVPDKVSGSEKE 497
Score = 33.5 bits (75), Expect(2) = 1e-19
Identities = 15/32 (46%), Positives = 21/32 (65%), Gaps = 3/32 (9%)
Frame = +2
Query: 452 ATYEDDIDP---INVKSKKGPTYSGDLVLEPK 538
A ++D +P + K+KK P Y+G LVLEPK
Sbjct: 507 AQQDEDFEPDSAVEAKNKKAPAYTGGLVLEPK 538
>ref|XP_006393908.1| hypothetical protein EUTSA_v10003515mg [Eutrema salsugineum]
gi|557090547|gb|ESQ31194.1| hypothetical protein
EUTSA_v10003515mg [Eutrema salsugineum]
Length = 1518
Score = 89.4 bits (220), Expect(2) = 2e-19
Identities = 48/94 (51%), Positives = 58/94 (61%)
Frame = +1
Query: 100 MIDCAETDAWLSFGLMFHVSVLPLTCQLTNLSGNLESKTLMVSRKM*SLCALSYIYIR** 279
+I+C ETDAWLS LMFH+SVLPLT QLTN+SGNL +TL
Sbjct: 783 LIECGETDAWLSMELMFHLSVLPLTLQLTNISGNLWGRTLQ------------------- 823
Query: 280 L*FDAL*GARAQRVENFLLHEFYN*KYILPDKLS 381
GARAQR+E +LLH F++ KYILPDK+S
Sbjct: 824 -------GARAQRIEYYLLHTFHSKKYILPDKIS 850
Score = 32.0 bits (71), Expect(2) = 2e-19
Identities = 13/17 (76%), Positives = 15/17 (88%)
Frame = +2
Query: 488 KSKKGPTYSGDLVLEPK 538
K+KKGP Y+G LVLEPK
Sbjct: 884 KTKKGPAYAGGLVLEPK 900
>ref|XP_002866717.1| hypothetical protein ARALYDRAFT_332862 [Arabidopsis lyrata subsp.
lyrata] gi|297312552|gb|EFH42976.1| hypothetical protein
ARALYDRAFT_332862 [Arabidopsis lyrata subsp. lyrata]
Length = 1492
Score = 89.4 bits (220), Expect(2) = 2e-19
Identities = 48/94 (51%), Positives = 58/94 (61%)
Frame = +1
Query: 100 MIDCAETDAWLSFGLMFHVSVLPLTCQLTNLSGNLESKTLMVSRKM*SLCALSYIYIR** 279
+I+C ETDAWLS LMFH+SVLPLT QLTN+SGNL KTL
Sbjct: 785 LIECGETDAWLSMELMFHLSVLPLTLQLTNISGNLWGKTLQ------------------- 825
Query: 280 L*FDAL*GARAQRVENFLLHEFYN*KYILPDKLS 381
GAR+QR+E +LLH F++ KYILPDK+S
Sbjct: 826 -------GARSQRIEYYLLHTFHSKKYILPDKIS 852
Score = 32.0 bits (71), Expect(2) = 2e-19
Identities = 13/17 (76%), Positives = 15/17 (88%)
Frame = +2
Query: 488 KSKKGPTYSGDLVLEPK 538
K+KKGP Y+G LVLEPK
Sbjct: 892 KTKKGPAYAGGLVLEPK 908
>ref|XP_006847112.1| hypothetical protein AMTR_s00017p00221560 [Amborella trichopoda]
gi|548850141|gb|ERN08693.1| hypothetical protein
AMTR_s00017p00221560 [Amborella trichopoda]
Length = 1706
Score = 88.2 bits (217), Expect(2) = 2e-19
Identities = 48/92 (52%), Positives = 56/92 (60%)
Frame = +1
Query: 100 MIDCAETDAWLSFGLMFHVSVLPLTCQLTNLSGNLESKTLMVSRKM*SLCALSYIYIR** 279
+++C ETDAWLS GLMFH+SVLPLT QLTN+SGNL KTL
Sbjct: 804 LVECGETDAWLSLGLMFHLSVLPLTRQLTNISGNLWGKTLQ------------------- 844
Query: 280 L*FDAL*GARAQRVENFLLHEFYN*KYILPDK 375
GARAQRVE LLH F++ KYI+PDK
Sbjct: 845 -------GARAQRVEYLLLHAFHSKKYIVPDK 869
Score = 32.7 bits (73), Expect(2) = 2e-19
Identities = 16/25 (64%), Positives = 16/25 (64%)
Frame = +2
Query: 464 DDIDPINVKSKKGPTYSGDLVLEPK 538
DD K KKGP YSG LVLEPK
Sbjct: 904 DDQHNDKEKRKKGPAYSGGLVLEPK 928
>ref|NP_201511.2| DNA polymerase alpha catalytic subunit [Arabidopsis thaliana]
gi|363548407|sp|Q9FHA3.2|DPOLA_ARATH RecName: Full=DNA
polymerase alpha catalytic subunit
gi|332010917|gb|AED98300.1| DNA polymerase alpha
catalytic subunit [Arabidopsis thaliana]
Length = 1524
Score = 89.0 bits (219), Expect(2) = 2e-19
Identities = 48/94 (51%), Positives = 58/94 (61%)
Frame = +1
Query: 100 MIDCAETDAWLSFGLMFHVSVLPLTCQLTNLSGNLESKTLMVSRKM*SLCALSYIYIR** 279
+I+C ETDAWLS LMFH+SVLPLT QLTN+SGNL KTL
Sbjct: 783 LIECGETDAWLSMELMFHLSVLPLTLQLTNISGNLWGKTLQ------------------- 823
Query: 280 L*FDAL*GARAQRVENFLLHEFYN*KYILPDKLS 381
GARAQR+E +LLH F++ K+ILPDK+S
Sbjct: 824 -------GARAQRIEYYLLHTFHSKKFILPDKIS 850
Score = 32.0 bits (71), Expect(2) = 2e-19
Identities = 13/17 (76%), Positives = 15/17 (88%)
Frame = +2
Query: 488 KSKKGPTYSGDLVLEPK 538
K+KKGP Y+G LVLEPK
Sbjct: 890 KTKKGPAYAGGLVLEPK 906
>dbj|BAB10944.1| DNA polymerase alpha 1 [Arabidopsis thaliana]
Length = 1492
Score = 89.0 bits (219), Expect(2) = 2e-19
Identities = 48/94 (51%), Positives = 58/94 (61%)
Frame = +1
Query: 100 MIDCAETDAWLSFGLMFHVSVLPLTCQLTNLSGNLESKTLMVSRKM*SLCALSYIYIR** 279
+I+C ETDAWLS LMFH+SVLPLT QLTN+SGNL KTL
Sbjct: 783 LIECGETDAWLSMELMFHLSVLPLTLQLTNISGNLWGKTLQ------------------- 823
Query: 280 L*FDAL*GARAQRVENFLLHEFYN*KYILPDKLS 381
GARAQR+E +LLH F++ K+ILPDK+S
Sbjct: 824 -------GARAQRIEYYLLHTFHSKKFILPDKIS 850
Score = 32.0 bits (71), Expect(2) = 2e-19
Identities = 13/17 (76%), Positives = 15/17 (88%)
Frame = +2
Query: 488 KSKKGPTYSGDLVLEPK 538
K+KKGP Y+G LVLEPK
Sbjct: 890 KTKKGPAYAGGLVLEPK 906
>ref|NP_001266164.1| DNA polymerase alpha catalytic subunit [Solanum lycopersicum]
gi|380710181|gb|AFD98849.1| DNA polymerase alpha
catalytic subunit [Solanum lycopersicum]
Length = 1561
Score = 85.9 bits (211), Expect(2) = 3e-19
Identities = 52/106 (49%), Positives = 60/106 (56%)
Frame = +1
Query: 100 MIDCAETDAWLSFGLMFHVSVLPLTCQLTNLSGNLESKTLMVSRKM*SLCALSYIYIR** 279
+I+C ETDAWLS LMFH+SVLPLT QLTN+SGNL KTL
Sbjct: 816 LIECGETDAWLSMELMFHLSVLPLTRQLTNISGNLWGKTLQ------------------- 856
Query: 280 L*FDAL*GARAQRVENFLLHEFYN*KYILPDKLSIKERKHVFKAKI 417
GARAQRVE LLH F+ K+I+PDK S H +AKI
Sbjct: 857 -------GARAQRVEYLLLHAFHAKKFIVPDKFS----SHAREAKI 891
Score = 34.7 bits (78), Expect(2) = 3e-19
Identities = 19/32 (59%), Positives = 22/32 (68%), Gaps = 1/32 (3%)
Frame = +2
Query: 446 DEATYEDDIDPINV-KSKKGPTYSGDLVLEPK 538
D+ E I IN K+KKGP+YSG LVLEPK
Sbjct: 911 DDPNIEGGILDINHGKAKKGPSYSGGLVLEPK 942
>ref|XP_004289559.1| PREDICTED: DNA polymerase alpha catalytic subunit-like [Fragaria
vesca subsp. vesca]
Length = 1532
Score = 84.0 bits (206), Expect(2) = 7e-19
Identities = 48/93 (51%), Positives = 55/93 (59%)
Frame = +1
Query: 100 MIDCAETDAWLSFGLMFHVSVLPLTCQLTNLSGNLESKTLMVSRKM*SLCALSYIYIR** 279
+I+ ETDAWLS GLMFH+SVLPLT QLTN+SGNL KTL
Sbjct: 789 LIEYGETDAWLSMGLMFHLSVLPLTRQLTNISGNLWGKTLQ------------------- 829
Query: 280 L*FDAL*GARAQRVENFLLHEFYN*KYILPDKL 378
GARAQRVE LLH F+ KYI+PDK+
Sbjct: 830 -------GARAQRVEYLLLHAFHAKKYIVPDKI 855
Score = 35.4 bits (80), Expect(2) = 7e-19
Identities = 19/42 (45%), Positives = 24/42 (57%), Gaps = 9/42 (21%)
Frame = +2
Query: 440 VNDEATYEDDIDPINV---------KSKKGPTYSGDLVLEPK 538
V ++A E D+ +NV K KKGP Y+G LVLEPK
Sbjct: 872 VEEKAAEELDVGDVNVVNDPQSGHGKGKKGPAYAGGLVLEPK 913
>ref|XP_002865605.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297311440|gb|EFH41864.1| predicted protein
[Arabidopsis lyrata subsp. lyrata]
Length = 1449
Score = 87.4 bits (215), Expect(2) = 7e-19
Identities = 51/101 (50%), Positives = 60/101 (59%), Gaps = 2/101 (1%)
Frame = +1
Query: 100 MIDCAETDAWLSFGLMFHVSVLPLTCQLTNLSGNLESKTLMVSRKM*SLCALSYIYIR** 279
+IDC ETDAWLS LMFH+S+LPLT QLTN+SGNL KTL
Sbjct: 743 LIDCGETDAWLSMELMFHLSILPLTLQLTNISGNLWGKTLQ------------------- 783
Query: 280 L*FDAL*GARAQRVENFLLHEFYN*KYILPDKL--SIKERK 396
GARAQR E +LLH F++ K+ILPDK+ KERK
Sbjct: 784 -------GARAQRNEYYLLHTFHSKKFILPDKIPQHRKERK 817
Score = 32.0 bits (71), Expect(2) = 7e-19
Identities = 13/17 (76%), Positives = 15/17 (88%)
Frame = +2
Query: 488 KSKKGPTYSGDLVLEPK 538
K+KKGP Y+G LVLEPK
Sbjct: 850 KTKKGPAYAGGLVLEPK 866
>ref|XP_002865689.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297311524|gb|EFH41948.1| predicted protein
[Arabidopsis lyrata subsp. lyrata]
Length = 1550
Score = 86.3 bits (212), Expect(2) = 2e-18
Identities = 50/101 (49%), Positives = 60/101 (59%), Gaps = 2/101 (1%)
Frame = +1
Query: 100 MIDCAETDAWLSFGLMFHVSVLPLTCQLTNLSGNLESKTLMVSRKM*SLCALSYIYIR** 279
+I+C ETDAWLS LMFH++VLPLT QLTN+SGNL KTL
Sbjct: 854 LIECGETDAWLSMELMFHLNVLPLTLQLTNISGNLWGKTLQ------------------- 894
Query: 280 L*FDAL*GARAQRVENFLLHEFYN*KYILPDKLS--IKERK 396
G AQR E +LLH F++ KYILPDK+S +KERK
Sbjct: 895 -------GGSAQRNEYYLLHTFHSKKYILPDKISQHMKERK 928
Score = 32.0 bits (71), Expect(2) = 2e-18
Identities = 13/17 (76%), Positives = 15/17 (88%)
Frame = +2
Query: 488 KSKKGPTYSGDLVLEPK 538
K+KKGP Y+G LVLEPK
Sbjct: 951 KTKKGPAYAGGLVLEPK 967
>ref|XP_006339883.1| PREDICTED: DNA polymerase alpha catalytic subunit-like [Solanum
tuberosum]
Length = 1560
Score = 85.9 bits (211), Expect(2) = 2e-18
Identities = 52/106 (49%), Positives = 60/106 (56%)
Frame = +1
Query: 100 MIDCAETDAWLSFGLMFHVSVLPLTCQLTNLSGNLESKTLMVSRKM*SLCALSYIYIR** 279
+I+C ETDAWLS LMFH+SVLPLT QLTN+SGNL KTL
Sbjct: 815 LIECGETDAWLSMELMFHLSVLPLTRQLTNISGNLWGKTLQ------------------- 855
Query: 280 L*FDAL*GARAQRVENFLLHEFYN*KYILPDKLSIKERKHVFKAKI 417
GARAQRVE LLH F+ K+I+PDK S H +AKI
Sbjct: 856 -------GARAQRVEYLLLHAFHAKKFIVPDKFS----SHAREAKI 890
Score = 32.0 bits (71), Expect(2) = 2e-18
Identities = 17/32 (53%), Positives = 21/32 (65%), Gaps = 1/32 (3%)
Frame = +2
Query: 446 DEATYEDDI-DPINVKSKKGPTYSGDLVLEPK 538
D+ E I D + K KKGP+Y+G LVLEPK
Sbjct: 910 DDPNIEGGIPDSSHGKVKKGPSYAGGLVLEPK 941
>ref|XP_002277947.2| PREDICTED: DNA polymerase alpha catalytic subunit-like [Vitis
vinifera]
Length = 1522
Score = 82.0 bits (201), Expect(2) = 3e-18
Identities = 48/94 (51%), Positives = 55/94 (58%)
Frame = +1
Query: 100 MIDCAETDAWLSFGLMFHVSVLPLTCQLTNLSGNLESKTLMVSRKM*SLCALSYIYIR** 279
+I+ ETDAWLS LMFH+SVLPLT LTN+SGNL KTL
Sbjct: 779 LIEYGETDAWLSMELMFHLSVLPLTRLLTNISGNLWGKTLQ------------------- 819
Query: 280 L*FDAL*GARAQRVENFLLHEFYN*KYILPDKLS 381
GARAQRVE LLHEF+ KYI+PDK+S
Sbjct: 820 -------GARAQRVEYLLLHEFHAKKYIVPDKIS 846
Score = 35.0 bits (79), Expect(2) = 3e-18
Identities = 19/32 (59%), Positives = 21/32 (65%), Gaps = 1/32 (3%)
Frame = +2
Query: 446 DEATYEDDIDPINV-KSKKGPTYSGDLVLEPK 538
D+A E+D N K KKGP YSG LVLEPK
Sbjct: 875 DDAHVENDAHHNNQGKGKKGPAYSGGLVLEPK 906
>ref|XP_002872345.1| hypothetical protein ARALYDRAFT_327035 [Arabidopsis lyrata subsp.
lyrata] gi|297318182|gb|EFH48604.1| hypothetical protein
ARALYDRAFT_327035 [Arabidopsis lyrata subsp. lyrata]
Length = 1376
Score = 84.7 bits (208), Expect(2) = 4e-18
Identities = 51/101 (50%), Positives = 60/101 (59%), Gaps = 2/101 (1%)
Frame = +1
Query: 100 MIDCAETDAWLSFGLMFHVSVLPLTCQLTNLSGNLESKTLMVSRKM*SLCALSYIYIR** 279
+I+ ETDAWLS LMFH+SVLPLT QLTN+SGNL TL
Sbjct: 673 LIERGETDAWLSMELMFHLSVLPLTLQLTNISGNLWGNTLQ------------------- 713
Query: 280 L*FDAL*GARAQRVENFLLHEFYN*KYILPDKLS--IKERK 396
GARAQR E +LLH F++ KYILPDK+S +KERK
Sbjct: 714 -------GARAQRNEYYLLHTFHSRKYILPDKISQHMKERK 747
Score = 32.0 bits (71), Expect(2) = 4e-18
Identities = 13/17 (76%), Positives = 15/17 (88%)
Frame = +2
Query: 488 KSKKGPTYSGDLVLEPK 538
K+KKGP Y+G LVLEPK
Sbjct: 778 KTKKGPAYAGGLVLEPK 794
>ref|XP_002310719.2| hypothetical protein POPTR_0007s10880g [Populus trichocarpa]
gi|550334610|gb|EEE91169.2| hypothetical protein
POPTR_0007s10880g [Populus trichocarpa]
Length = 1536
Score = 83.2 bits (204), Expect(2) = 8e-18
Identities = 49/101 (48%), Positives = 59/101 (58%), Gaps = 2/101 (1%)
Frame = +1
Query: 100 MIDCAETDAWLSFGLMFHVSVLPLTCQLTNLSGNLESKTLMVSRKM*SLCALSYIYIR** 279
+++ ETDAWLS LMFH+S+LPLT QLTN+SGNL KTL
Sbjct: 789 LVEYGETDAWLSMELMFHLSILPLTRQLTNISGNLWGKTLQ------------------- 829
Query: 280 L*FDAL*GARAQRVENFLLHEFYN*KYILPDKLS--IKERK 396
GARAQRVE LLH F+ KYI+PDK+S +KE K
Sbjct: 830 -------GARAQRVEYLLLHAFHAKKYIVPDKMSSRVKEAK 863
Score = 32.7 bits (73), Expect(2) = 8e-18
Identities = 17/32 (53%), Positives = 21/32 (65%), Gaps = 1/32 (3%)
Frame = +2
Query: 446 DEATYEDDIDPINV-KSKKGPTYSGDLVLEPK 538
D A +E+D + K KKGP Y+G LVLEPK
Sbjct: 884 DAANFENDNQQSDHGKRKKGPAYAGGLVLEPK 915
>ref|XP_006466591.1| PREDICTED: DNA polymerase alpha catalytic subunit-like [Citrus
sinensis]
Length = 1517
Score = 82.4 bits (202), Expect(2) = 1e-17
Identities = 50/100 (50%), Positives = 58/100 (58%), Gaps = 1/100 (1%)
Frame = +1
Query: 100 MIDCAETDAWLSFGLMFHVSVLPLTCQLTNLSGNLESKTLMVSRKM*SLCALSYIYIR** 279
+I+ ETDAWLS LMFH+SVLPLT QLTN+SGNL KTL
Sbjct: 775 LIEYGETDAWLSMELMFHLSVLPLTRQLTNISGNLWGKTLQ------------------- 815
Query: 280 L*FDAL*GARAQRVENFLLHEFYN*KYILPDKLS-IKERK 396
GARAQRVE LLH F+ KYI+PDK + +KE K
Sbjct: 816 -------GARAQRVEYLLLHAFHAKKYIVPDKFTYVKETK 848
Score = 32.7 bits (73), Expect(2) = 1e-17
Identities = 15/33 (45%), Positives = 23/33 (69%), Gaps = 1/33 (3%)
Frame = +2
Query: 443 NDEATYEDDIDPINV-KSKKGPTYSGDLVLEPK 538
N++A +++D + K K+GP Y+G LVLEPK
Sbjct: 868 NEDANFDNDTSHNDHRKGKRGPAYAGGLVLEPK 900
>gb|EXB54380.1| DNA polymerase alpha catalytic subunit [Morus notabilis]
Length = 1551
Score = 82.8 bits (203), Expect(2) = 2e-17
Identities = 50/101 (49%), Positives = 59/101 (58%), Gaps = 2/101 (1%)
Frame = +1
Query: 100 MIDCAETDAWLSFGLMFHVSVLPLTCQLTNLSGNLESKTLMVSRKM*SLCALSYIYIR** 279
+I+ ETDAWLS LMFH+SVLPLT QLTN+SGNL KTL
Sbjct: 768 LIEYGETDAWLSMELMFHLSVLPLTRQLTNISGNLWGKTLQ------------------- 808
Query: 280 L*FDAL*GARAQRVENFLLHEFYN*KYILPDKLS--IKERK 396
GARAQRVE LLH F+ KY++PDK+S +KE K
Sbjct: 809 -------GARAQRVEYLLLHAFHAKKYMVPDKISSHVKETK 842
Score = 31.6 bits (70), Expect(2) = 2e-17
Identities = 13/17 (76%), Positives = 14/17 (82%)
Frame = +2
Query: 488 KSKKGPTYSGDLVLEPK 538
K KKGP Y+G LVLEPK
Sbjct: 878 KGKKGPAYAGGLVLEPK 894