BLASTX nr result
ID: Ephedra25_contig00027801
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra25_contig00027801
(414 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ABR16597.1| unknown [Picea sitchensis] 57 9e-14
gb|EOX93215.1| General transcription factor IIE subunit 1 isofor... 47 1e-09
gb|EOX93214.1| General transcription factor IIE subunit 1 isofor... 47 1e-09
gb|EOX93216.1| General transcription factor IIE subunit 1 isofor... 47 1e-09
ref|XP_006854401.1| hypothetical protein AMTR_s00039p00190210 [A... 45 2e-08
gb|EMJ11181.1| hypothetical protein PRUPE_ppa005116mg [Prunus pe... 45 7e-08
ref|XP_003633196.1| PREDICTED: general transcription factor IIE ... 42 6e-07
gb|EMT02545.1| General transcription factor IIE subunit 1 [Aegil... 44 5e-06
gb|EXC28058.1| General transcription factor IIE subunit 1 [Morus... 45 6e-06
>gb|ABR16597.1| unknown [Picea sitchensis]
Length = 480
Score = 57.4 bits (137), Expect(2) = 9e-14
Identities = 30/76 (39%), Positives = 50/76 (65%), Gaps = 3/76 (3%)
Frame = -2
Query: 224 MNLTSEQRGEVKPDIKPDSKSSFVD--ADQKPSTEDQEAAQKRMQ-VCLKAYYFELYKHR 54
MNLT+EQRGEVK ++KPD+ SSF+ ++KP+ +++ Q+ +Q LKAYY ++K +
Sbjct: 332 MNLTNEQRGEVKQELKPDNISSFMGPAVEKKPTDDEKGNIQQNLQEEYLKAYYAAIFKQQ 391
Query: 53 NKTNASVASEAETKSE 6
+ A+ + A +E
Sbjct: 392 QEAEAAATAAAAAAAE 407
Score = 44.7 bits (104), Expect(2) = 9e-14
Identities = 19/34 (55%), Positives = 26/34 (76%)
Frame = -3
Query: 331 QKEVEVQISGIDNKTEDSKEAAAGRKMLPPWMVR 230
+ +VEV +SG++ K EDSKE A K+LPPWM+R
Sbjct: 296 ETKVEVALSGMEVKAEDSKEDVASLKVLPPWMIR 329
>gb|EOX93215.1| General transcription factor IIE subunit 1 isoform 2 [Theobroma
cacao]
Length = 480
Score = 47.4 bits (111), Expect(2) = 1e-09
Identities = 28/70 (40%), Positives = 37/70 (52%), Gaps = 1/70 (1%)
Frame = -2
Query: 224 MNLTSEQRGEVKPDIKPDSKSSFVD-ADQKPSTEDQEAAQKRMQVCLKAYYFELYKHRNK 48
MNLT EQRGEVK + K D S+ D +D K ST + + LKAYY LYK + +
Sbjct: 339 MNLTKEQRGEVKQESKTDGTSAQPDFSDDKKSTIGTDDKKNLQDEYLKAYYAALYKKQQE 398
Query: 47 TNASVASEAE 18
+ + E
Sbjct: 399 LEEAAKKQEE 408
Score = 40.8 bits (94), Expect(2) = 1e-09
Identities = 18/34 (52%), Positives = 25/34 (73%), Gaps = 2/34 (5%)
Frame = -3
Query: 325 EVEVQISGIDNKTEDSKEAAAGR--KMLPPWMVR 230
+VEV SG+D K ED+K +AG K+LPPWM++
Sbjct: 303 QVEVAFSGLDGKEEDAKSESAGTSLKVLPPWMIK 336
>gb|EOX93214.1| General transcription factor IIE subunit 1 isoform 1 [Theobroma
cacao]
Length = 475
Score = 47.4 bits (111), Expect(2) = 1e-09
Identities = 28/70 (40%), Positives = 37/70 (52%), Gaps = 1/70 (1%)
Frame = -2
Query: 224 MNLTSEQRGEVKPDIKPDSKSSFVD-ADQKPSTEDQEAAQKRMQVCLKAYYFELYKHRNK 48
MNLT EQRGEVK + K D S+ D +D K ST + + LKAYY LYK + +
Sbjct: 334 MNLTKEQRGEVKQESKTDGTSAQPDFSDDKKSTIGTDDKKNLQDEYLKAYYAALYKKQQE 393
Query: 47 TNASVASEAE 18
+ + E
Sbjct: 394 LEEAAKKQEE 403
Score = 40.8 bits (94), Expect(2) = 1e-09
Identities = 18/36 (50%), Positives = 26/36 (72%), Gaps = 2/36 (5%)
Frame = -3
Query: 331 QKEVEVQISGIDNKTEDSKEAAAGR--KMLPPWMVR 230
+ +VEV SG+D K ED+K +AG K+LPPWM++
Sbjct: 296 ETKVEVAFSGLDGKEEDAKSESAGTSLKVLPPWMIK 331
>gb|EOX93216.1| General transcription factor IIE subunit 1 isoform 3 [Theobroma
cacao]
Length = 473
Score = 47.4 bits (111), Expect(2) = 1e-09
Identities = 28/70 (40%), Positives = 37/70 (52%), Gaps = 1/70 (1%)
Frame = -2
Query: 224 MNLTSEQRGEVKPDIKPDSKSSFVD-ADQKPSTEDQEAAQKRMQVCLKAYYFELYKHRNK 48
MNLT EQRGEVK + K D S+ D +D K ST + + LKAYY LYK + +
Sbjct: 332 MNLTKEQRGEVKQESKTDGTSAQPDFSDDKKSTIGTDDKKNLQDEYLKAYYAALYKKQQE 391
Query: 47 TNASVASEAE 18
+ + E
Sbjct: 392 LEEAAKKQEE 401
Score = 40.8 bits (94), Expect(2) = 1e-09
Identities = 18/36 (50%), Positives = 26/36 (72%), Gaps = 2/36 (5%)
Frame = -3
Query: 331 QKEVEVQISGIDNKTEDSKEAAAGR--KMLPPWMVR 230
+ +VEV SG+D K ED+K +AG K+LPPWM++
Sbjct: 294 ETKVEVAFSGLDGKEEDAKSESAGTSLKVLPPWMIK 329
>ref|XP_006854401.1| hypothetical protein AMTR_s00039p00190210 [Amborella trichopoda]
gi|548858077|gb|ERN15868.1| hypothetical protein
AMTR_s00039p00190210 [Amborella trichopoda]
Length = 478
Score = 45.4 bits (106), Expect(2) = 2e-08
Identities = 28/74 (37%), Positives = 44/74 (59%), Gaps = 2/74 (2%)
Frame = -2
Query: 224 MNLTSEQRGEVKPDIKPDSKS-SFVDADQKPSTEDQEAAQKRMQ-VCLKAYYFELYKHRN 51
MNLT+EQRGEVK +IK ++ S + ++KP +++ AQ +Q LKAYY + K +
Sbjct: 334 MNLTNEQRGEVKQEIKTENASIAHPLEEKKPKEGEKQNAQTNIQEEYLKAYYAAILKRQQ 393
Query: 50 KTNASVASEAETKS 9
+ A+ A + S
Sbjct: 394 EEQAAAAYSVASTS 407
Score = 38.9 bits (89), Expect(2) = 2e-08
Identities = 18/36 (50%), Positives = 25/36 (69%), Gaps = 2/36 (5%)
Frame = -3
Query: 331 QKEVEVQISGIDNKTEDSKE--AAAGRKMLPPWMVR 230
+ VEV +SG++ K ED K AA RK+LPPWM++
Sbjct: 296 ETRVEVALSGVEEKEEDLKPDYAATVRKVLPPWMIK 331
>gb|EMJ11181.1| hypothetical protein PRUPE_ppa005116mg [Prunus persica]
Length = 476
Score = 44.7 bits (104), Expect(2) = 7e-08
Identities = 29/72 (40%), Positives = 37/72 (51%), Gaps = 4/72 (5%)
Frame = -2
Query: 224 MNLTSEQRGEVKPDIKPDSKSSFV----DADQKPSTEDQEAAQKRMQVCLKAYYFELYKH 57
MNLT EQRGEVK + K D S D+K +TE+ E + LKAYY L K
Sbjct: 332 MNLTKEQRGEVKQEAKMDGSGSLAAPEYSEDKKFNTENNE--KNLQDEYLKAYYAALIKR 389
Query: 56 RNKTNASVASEA 21
+ + A A E+
Sbjct: 390 QEEEEAKKAQES 401
Score = 37.4 bits (85), Expect(2) = 7e-08
Identities = 17/34 (50%), Positives = 24/34 (70%), Gaps = 2/34 (5%)
Frame = -3
Query: 325 EVEVQISGIDNKTEDSKEAA--AGRKMLPPWMVR 230
+VEV SG++ K +D K A AG K+LPPWM++
Sbjct: 296 KVEVDFSGVEGKGKDIKSEADGAGLKVLPPWMIK 329
>ref|XP_003633196.1| PREDICTED: general transcription factor IIE subunit 1-like [Vitis
vinifera] gi|297735317|emb|CBI17757.3| unnamed protein
product [Vitis vinifera]
Length = 475
Score = 42.4 bits (98), Expect(2) = 6e-07
Identities = 23/70 (32%), Positives = 37/70 (52%), Gaps = 1/70 (1%)
Frame = -2
Query: 224 MNLTSEQRGEVKPDIKPDSKSS-FVDADQKPSTEDQEAAQKRMQVCLKAYYFELYKHRNK 48
MNLT EQRGE+K + K S S+ +D K ST +++ + +KAYY + K + +
Sbjct: 333 MNLTKEQRGEIKQESKMGSSSAPLGSSDDKKSTTNKDEEKNLQDEYVKAYYAAILKRQQE 392
Query: 47 TNASVASEAE 18
+ + E
Sbjct: 393 QEEAAKKQLE 402
Score = 36.6 bits (83), Expect(2) = 6e-07
Identities = 18/36 (50%), Positives = 24/36 (66%), Gaps = 2/36 (5%)
Frame = -3
Query: 331 QKEVEVQISGIDNKTEDSKE--AAAGRKMLPPWMVR 230
+ +VEV SG+ K EDSK A A K+LPPWM++
Sbjct: 295 ETKVEVAFSGVGVKEEDSKSEIANASLKVLPPWMIK 330
>gb|EMT02545.1| General transcription factor IIE subunit 1 [Aegilops tauschii]
Length = 479
Score = 43.9 bits (102), Expect(2) = 5e-06
Identities = 31/80 (38%), Positives = 40/80 (50%), Gaps = 6/80 (7%)
Frame = -2
Query: 224 MNLTSEQRGEVKPDIKPDSKSSFVDADQKPSTEDQEAAQKRMQVCLKAYYFELYKHRNKT 45
MNLT EQRGE K D KS D ++ S ED+++ Q LKAYY L K + +
Sbjct: 344 MNLTKEQRGESSNTSKGDEKSEVKDEKKQDSKEDEKSLQDEY---LKAYYEALKKRQEEE 400
Query: 44 NA------SVASEAETKSER 3
+A A +E SER
Sbjct: 401 DAKRMQQEGQAFSSEIHSER 420
Score = 32.0 bits (71), Expect(2) = 5e-06
Identities = 14/36 (38%), Positives = 23/36 (63%)
Frame = -3
Query: 337 DHQKEVEVQISGIDNKTEDSKEAAAGRKMLPPWMVR 230
D + +VE+ SG+ + ++S + K+LPPWMVR
Sbjct: 306 DTKVDVELAGSGVKAEGDESGRDGSALKVLPPWMVR 341
>gb|EXC28058.1| General transcription factor IIE subunit 1 [Morus notabilis]
Length = 406
Score = 44.7 bits (104), Expect(2) = 6e-06
Identities = 24/73 (32%), Positives = 38/73 (52%), Gaps = 1/73 (1%)
Frame = -2
Query: 224 MNLTSEQRGEVKPDIKPDSKSSFVD-ADQKPSTEDQEAAQKRMQVCLKAYYFELYKHRNK 48
MNLT EQRG++K + K D S+ + +D K ST + + + +KAYY L K + +
Sbjct: 263 MNLTKEQRGDIKQEAKMDGSSTSAEISDDKKSTIEHDETKNIQDEYVKAYYAALLKKQQE 322
Query: 47 TNASVASEAETKS 9
+ + E S
Sbjct: 323 LEEAAKQQQEPSS 335
Score = 30.8 bits (68), Expect(2) = 6e-06
Identities = 15/34 (44%), Positives = 21/34 (61%), Gaps = 2/34 (5%)
Frame = -3
Query: 325 EVEVQISGIDNKTEDSKEAAAG--RKMLPPWMVR 230
+VEV SG + K E+ K A K+LPPWM++
Sbjct: 227 KVEVAFSGAEGKGENIKSEAESISLKVLPPWMIK 260