BLASTX nr result
ID: Ephedra25_contig00027777
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Ephedra25_contig00027777 (461 letters) Database: ./nr 37,332,560 sequences; 13,225,080,153 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_004145327.1| PREDICTED: pentatricopeptide repeat-containi... 151 1e-34 dbj|BAB62584.1| pentatricopeptide (PPR) repeat-containing protei... 150 2e-34 gb|ESW34360.1| hypothetical protein PHAVU_001G146000g [Phaseolus... 149 5e-34 ref|XP_003545972.2| PREDICTED: pentatricopeptide repeat-containi... 148 6e-34 ref|XP_002877513.1| hypothetical protein ARALYDRAFT_905886 [Arab... 148 6e-34 ref|XP_006418855.1| hypothetical protein EUTSA_v10002433mg [Eutr... 147 1e-33 ref|NP_181269.1| pentatricopeptide repeat-containing protein [Ar... 147 1e-33 ref|XP_006410915.1| hypothetical protein EUTSA_v10017783mg [Eutr... 147 1e-33 gb|EOY03681.1| Pentatricopeptide repeat superfamily protein, put... 147 1e-33 ref|XP_006857329.1| hypothetical protein AMTR_s00067p00084250 [A... 147 2e-33 ref|NP_190263.1| protein CHLORORESPIRATORY REDUCTION 2 [Arabidop... 147 2e-33 ref|XP_004983935.1| PREDICTED: putative pentatricopeptide repeat... 146 2e-33 ref|XP_004493626.1| PREDICTED: pentatricopeptide repeat-containi... 146 2e-33 ref|XP_006290707.1| hypothetical protein CARUB_v10016805mg [Caps... 146 2e-33 tpg|DAA61049.1| TPA: hypothetical protein ZEAMMB73_995105 [Zea m... 146 2e-33 ref|XP_002282081.2| PREDICTED: pentatricopeptide repeat-containi... 146 2e-33 ref|XP_006646434.1| PREDICTED: pentatricopeptide repeat-containi... 145 4e-33 ref|XP_002313416.2| chlororespiratory reduction 2 family protein... 145 4e-33 ref|XP_004516023.1| PREDICTED: pentatricopeptide repeat-containi... 145 4e-33 gb|EMT12971.1| hypothetical protein F775_10400 [Aegilops tauschii] 144 1e-32 >ref|XP_004145327.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790, chloroplastic-like [Cucumis sativus] gi|449474033|ref|XP_004154055.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790, chloroplastic-like [Cucumis sativus] gi|449510921|ref|XP_004163811.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790, chloroplastic-like [Cucumis sativus] Length = 649 Score = 151 bits (381), Expect = 1e-34 Identities = 70/150 (46%), Positives = 103/150 (68%) Frame = +2 Query: 2 AGLRQGMMVHRYVVVLGSGCSLELSSALVAMYCKCGMVDSGRRIFDRISRRDVVCWNGMI 181 A L QG ++H Y++ G L + SAL+ MY +CG ++SG+ IFDR+ ++DVV WN +I Sbjct: 291 AALEQGKLIHAYILRRGLDSILPVISALITMYARCGKLESGQLIFDRMHKKDVVLWNSLI 350 Query: 182 RGYALNGRADEAIELFERMTRYSSTRPNHGTFSGVLAACCHGGLVSEGKQYFERMKRDFG 361 Y L+G +AI++FE M + + P+H +F VL AC H GLV EGK+ FE M ++ G Sbjct: 351 SSYGLHGYGRKAIKIFEEMIDHGFS-PSHISFISVLGACSHTGLVEEGKKLFESMVKEHG 409 Query: 362 LEPEAEHYACLIDLLGKLERLNEAVKIMEN 451 ++P EHYAC++DLLG+ RL+EA KI+E+ Sbjct: 410 IQPSVEHYACMVDLLGRANRLDEAAKIIED 439 Score = 68.6 bits (166), Expect = 8e-10 Identities = 44/148 (29%), Positives = 72/148 (48%), Gaps = 1/148 (0%) Frame = +2 Query: 8 LRQGMMVHRYVVVLGSGCSLELSSALVAMYCKCGMVDSGRRIFDRISRRDVVCWNGMIRG 187 L++G +H +++ G G + + + L+ MY + G V +FD + ++VV W+ MI Sbjct: 190 LQKGKEIHAHILRHGYGAHVHVMTTLMDMYARFGCVSYASAVFDEMPVKNVVSWSAMIAC 249 Query: 188 YALNGRADEAIELF-ERMTRYSSTRPNHGTFSGVLAACCHGGLVSEGKQYFERMKRDFGL 364 YA NG+ EA+ELF E M + PN T VL AC + +GK + R GL Sbjct: 250 YAKNGKPYEALELFREMMLNTHDSVPNSVTMVSVLQACAAFAALEQGKLIHAYILRR-GL 308 Query: 365 EPEAEHYACLIDLLGKLERLNEAVKIME 448 + + LI + + +L I + Sbjct: 309 DSILPVISALITMYARCGKLESGQLIFD 336 Score = 58.9 bits (141), Expect = 7e-07 Identities = 38/154 (24%), Positives = 72/154 (46%), Gaps = 4/154 (2%) Frame = +2 Query: 8 LRQGMMVHRYVVVLGSGCSLELSSALVAMYCKCGMVDSGRRIFDRISRRDVVCWNGMIRG 187 L + VH+ +V G L++ L+ M+ + VD+ R++FD+ +R + WN + R Sbjct: 85 LSDALDVHQLLVDGGFDQDPFLATKLINMFSELDTVDNARKVFDKTRKRTIYVWNALFRA 144 Query: 188 YALNGRADEAIELFERMTRYSSTRPNHGTFSGVLAAC----CHGGLVSEGKQYFERMKRD 355 AL GR ++ +EL+ RM + T++ +L AC C + +GK+ + R Sbjct: 145 LALAGRGNDVLELYPRM-NMMGVSSDRFTYTYLLKACVASECLVSFLQKGKEIHAHILR- 202 Query: 356 FGLEPEAEHYACLIDLLGKLERLNEAVKIMENTP 457 G L+D+ + ++ A + + P Sbjct: 203 HGYGAHVHVMTTLMDMYARFGCVSYASAVFDEMP 236 >dbj|BAB62584.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza sativa Japonica Group] Length = 612 Score = 150 bits (378), Expect = 2e-34 Identities = 77/154 (50%), Positives = 97/154 (62%), Gaps = 4/154 (2%) Frame = +2 Query: 2 AGLRQGMMVHRYVVVLGSGCSLELSS----ALVAMYCKCGMVDSGRRIFDRISRRDVVCW 169 A L+ G VH Y+V G C L S ALV MY K G +D RRIFDR+ +RDV W Sbjct: 320 AALQVGREVHGYIVTSGLACHGALDSFACNALVDMYAKSGALDEARRIFDRMQQRDVASW 379 Query: 170 NGMIRGYALNGRADEAIELFERMTRYSSTRPNHGTFSGVLAACCHGGLVSEGKQYFERMK 349 N MI GYA +G EA+ELF +MT P+ T G L+AC H GLV EGK + +RMK Sbjct: 380 NIMIDGYASHGHGKEALELFCQMTEVERLLPDEITLLGALSACSHSGLVEEGKNFLKRMK 439 Query: 350 RDFGLEPEAEHYACLIDLLGKLERLNEAVKIMEN 451 +F LEP+ EHYAC+ D+LG+ RL EA K++E+ Sbjct: 440 EEFSLEPQLEHYACVTDMLGRAGRLEEARKVVED 473 Score = 67.4 bits (163), Expect = 2e-09 Identities = 39/143 (27%), Positives = 65/143 (45%) Frame = +2 Query: 20 MMVHRYVVVLGSGCSLELSSALVAMYCKCGMVDSGRRIFDRISRRDVVCWNGMIRGYALN 199 + +H + G L +SA++ + G+ D RR+F + RRDVV WN M+ G+A Sbjct: 121 LALHALALRCGLAHDLFCASAMLRSCLRFGLADHARRLFGELPRRDVVVWNAMVNGFARL 180 Query: 200 GRADEAIELFERMTRYSSTRPNHGTFSGVLAACCHGGLVSEGKQYFERMKRDFGLEPEAE 379 G A+E F M + T +G+L+ C + G + + E E Sbjct: 181 GCFGHAVECFRMMREDGEVEISSFTVTGILSVCTATADLGHGAAVHGLVVKS-AFEQEVS 239 Query: 380 HYACLIDLLGKLERLNEAVKIME 448 L+DL GK ++++A + E Sbjct: 240 VCNALVDLYGKCHKVDDAAMVFE 262 >gb|ESW34360.1| hypothetical protein PHAVU_001G146000g [Phaseolus vulgaris] Length = 670 Score = 149 bits (375), Expect = 5e-34 Identities = 69/148 (46%), Positives = 103/148 (69%), Gaps = 1/148 (0%) Frame = +2 Query: 17 GMMVHRYVVV-LGSGCSLELSSALVAMYCKCGMVDSGRRIFDRISRRDVVCWNGMIRGYA 193 G +HRY V + S+ L++A++ MY KCG +D+ +F +S R++V WN MI GYA Sbjct: 399 GHWIHRYFVDRIRISLSVTLTNAIIDMYAKCGSIDAAAEVFSAMSERNLVSWNSMIAGYA 458 Query: 194 LNGRADEAIELFERMTRYSSTRPNHGTFSGVLAACCHGGLVSEGKQYFERMKRDFGLEPE 373 NGRA +A+E+F++M R P+ TF +L AC HGGLVS+GK+YF+ M+R +G++P+ Sbjct: 459 ANGRAKQAVEVFDKM-RCMGFEPDDITFVSLLTACSHGGLVSQGKEYFDTMERKYGIKPK 517 Query: 374 AEHYACLIDLLGKLERLNEAVKIMENTP 457 EHYAC+IDLLG+ + EA K+++N P Sbjct: 518 KEHYACMIDLLGRTGLVEEAYKLIKNMP 545 Score = 67.4 bits (163), Expect = 2e-09 Identities = 42/113 (37%), Positives = 55/113 (48%) Frame = +2 Query: 14 QGMMVHRYVVVLGSGCSLELSSALVAMYCKCGMVDSGRRIFDRISRRDVVCWNGMIRGYA 193 QG VH G L + + LV Y G ++ R +FD +S +DVV W MI GYA Sbjct: 165 QGESVHSLARKTGFDSELLVRNGLVHFYAVRGWLNHARGVFDEMSVKDVVTWTTMIDGYA 224 Query: 194 LNGRADEAIELFERMTRYSSTRPNHGTFSGVLAACCHGGLVSEGKQYFERMKR 352 +D A ELF M PN T VL+AC H G + GK+ E M++ Sbjct: 225 ACNCSDVATELFGLMLE-GDVEPNEVTLIAVLSACSHKGDLGMGKRIHEIMEK 276 Score = 59.3 bits (142), Expect = 5e-07 Identities = 38/136 (27%), Positives = 60/136 (44%) Frame = +2 Query: 8 LRQGMMVHRYVVVLGSGCSLELSSALVAMYCKCGMVDSGRRIFDRISRRDVVCWNGMIRG 187 L G +H + L L +AL+ MY KCG + + R++FDR+ RDV W M+ G Sbjct: 264 LGMGKRIHEIMEKKNVRWGLSLHNALLDMYVKCGCLVAARKVFDRMESRDVFSWTTMVNG 323 Query: 188 YALNGRADEAIELFERMTRYSSTRPNHGTFSGVLAACCHGGLVSEGKQYFERMKRDFGLE 367 YA G + A FE+ + + N +S ++A + + F M + G Sbjct: 324 YAKCGDLESARRFFEQ-----TPQKNVVCWSAMIAGYSQNDKPKDSLKLFHEMLEE-GFV 377 Query: 368 PEAEHYACLIDLLGKL 415 P ++ GKL Sbjct: 378 PVEHTLVSVLSACGKL 393 >ref|XP_003545972.2| PREDICTED: pentatricopeptide repeat-containing protein At3g63370-like [Glycine max] Length = 930 Score = 148 bits (374), Expect = 6e-34 Identities = 71/149 (47%), Positives = 96/149 (64%) Frame = +2 Query: 14 QGMMVHRYVVVLGSGCSLELSSALVAMYCKCGMVDSGRRIFDRISRRDVVCWNGMIRGYA 193 QG +H + + G C + S++LV MY KCG ++ R F I R +V W+ MI GYA Sbjct: 576 QGKQLHVHAIKFGFMCDIFASNSLVNMYAKCGSIEDADRAFSEIPNRGIVSWSAMIGGYA 635 Query: 194 LNGRADEAIELFERMTRYSSTRPNHGTFSGVLAACCHGGLVSEGKQYFERMKRDFGLEPE 373 +G EA+ LF +M R PNH T VL AC H GLV+EGKQYFE+M+ FG++P Sbjct: 636 QHGHGKEALRLFNQMLR-DGVPPNHITLVSVLCACNHAGLVNEGKQYFEKMEVMFGIKPT 694 Query: 374 AEHYACLIDLLGKLERLNEAVKIMENTPF 460 EHYAC+IDLLG+ +LNEAV+++ + PF Sbjct: 695 QEHYACMIDLLGRSGKLNEAVELVNSIPF 723 Score = 72.4 bits (176), Expect = 6e-11 Identities = 47/148 (31%), Positives = 71/148 (47%) Frame = +2 Query: 8 LRQGMMVHRYVVVLGSGCSLELSSALVAMYCKCGMVDSGRRIFDRISRRDVVCWNGMIRG 187 L G VH VV G +++ LV MY KCG++D RR+F I R+VV WN + Sbjct: 170 LNMGRKVHGMAVVTGFESDGFVANTLVVMYAKCGLLDDSRRLFGGIVERNVVSWNALFSC 229 Query: 188 YALNGRADEAIELFERMTRYSSTRPNHGTFSGVLAACCHGGLVSEGKQYFERMKRDFGLE 367 Y + EA+ LF+ M R S PN + S +L AC G++ M + GL+ Sbjct: 230 YVQSELCGEAVGLFKEMVR-SGIMPNEFSISIILNACAGLQEGDLGRKIHGLMLK-MGLD 287 Query: 368 PEAEHYACLIDLLGKLERLNEAVKIMEN 451 + L+D+ K + AV + ++ Sbjct: 288 LDQFSANALVDMYSKAGEIEGAVAVFQD 315 Score = 70.9 bits (172), Expect = 2e-10 Identities = 47/157 (29%), Positives = 81/157 (51%), Gaps = 5/157 (3%) Frame = +2 Query: 2 AGLRQGMM---VHRYVVVLGSGCSLELSSALVAMYCKCGMVDSGRRIFDRISRRDVVCWN 172 AGL++G + +H ++ +G ++ALV MY K G ++ +F I+ DVV WN Sbjct: 266 AGLQEGDLGRKIHGLMLKMGLDLDQFSANALVDMYSKAGEIEGAVAVFQDIAHPDVVSWN 325 Query: 173 GMIRGYALNGRADEAIELFERMTRYSSTRPNHGTFSGVLAACCHGGLVSEGKQYFERMKR 352 +I G L+ D A+ L + M + S TRPN T S L AC G G+Q + + Sbjct: 326 AIIAGCVLHDCNDLALMLLDEM-KGSGTRPNMFTLSSALKACAAMGFKELGRQLHSSLIK 384 Query: 353 DFGLEPEAEHYAC--LIDLLGKLERLNEAVKIMENTP 457 ++ ++ +A L+D+ K E +++A + ++ P Sbjct: 385 ---MDAHSDLFAAVGLVDMYSKCEMMDDARRAYDSMP 418 Score = 65.5 bits (158), Expect = 7e-09 Identities = 42/144 (29%), Positives = 68/144 (47%) Frame = +2 Query: 17 GMMVHRYVVVLGSGCSLELSSALVAMYCKCGMVDSGRRIFDRISRRDVVCWNGMIRGYAL 196 G +H ++ + + L + LV MY KC M+D RR +D + ++D++ WN +I GY+ Sbjct: 375 GRQLHSSLIKMDAHSDLFAAVGLVDMYSKCEMMDDARRAYDSMPKKDIIAWNALISGYSQ 434 Query: 197 NGRADEAIELFERMTRYSSTRPNHGTFSGVLAACCHGGLVSEGKQYFERMKRDFGLEPEA 376 G +A+ LF +M N T S VL + + KQ + G+ + Sbjct: 435 CGDHLDAVSLFSKMFS-EDIDFNQTTLSTVLKSVASLQAIKVCKQ-IHTISIKSGIYSDF 492 Query: 377 EHYACLIDLLGKLERLNEAVKIME 448 L+D GK ++EA KI E Sbjct: 493 YVINSLLDTYGKCNHIDEASKIFE 516 Score = 61.2 bits (147), Expect = 1e-07 Identities = 33/97 (34%), Positives = 48/97 (49%) Frame = +2 Query: 8 LRQGMMVHRYVVVLGSGCSLELSSALVAMYCKCGMVDSGRRIFDRISRRDVVCWNGMIRG 187 L GM +H +++ G L + LV +Y KC R++ D S DVV W+ ++ G Sbjct: 69 LTSGMELHAHLIKFGFSRDPSLRNHLVTLYSKCRRFGYARKLVDESSELDVVSWSSLLSG 128 Query: 188 YALNGRADEAIELFERMTRYSSTRPNHGTFSGVLAAC 298 Y NG +EA+ +F M + N TF VL AC Sbjct: 129 YVQNGFVEEALLVFNEMC-LLGVKCNEFTFPSVLKAC 164 >ref|XP_002877513.1| hypothetical protein ARALYDRAFT_905886 [Arabidopsis lyrata subsp. lyrata] gi|297323351|gb|EFH53772.1| hypothetical protein ARALYDRAFT_905886 [Arabidopsis lyrata subsp. lyrata] Length = 657 Score = 148 bits (374), Expect = 6e-34 Identities = 71/150 (47%), Positives = 101/150 (67%) Frame = +2 Query: 2 AGLRQGMMVHRYVVVLGSGCSLELSSALVAMYCKCGMVDSGRRIFDRISRRDVVCWNGMI 181 A L QG ++H Y++ G L + SALV MY +CG +D G+R+FDR+ RDVV WN +I Sbjct: 299 AALEQGRLIHGYILRRGLDSILPVISALVTMYGRCGKLDVGQRVFDRMHDRDVVSWNSLI 358 Query: 182 RGYALNGRADEAIELFERMTRYSSTRPNHGTFSGVLAACCHGGLVSEGKQYFERMKRDFG 361 Y ++G +AI++FE M ++ P TF VL AC H GLV EGK+ FE M RD G Sbjct: 359 SSYGVHGYGRKAIQIFEEMLANGAS-PTPVTFVSVLGACSHEGLVEEGKRLFESMWRDHG 417 Query: 362 LEPEAEHYACLIDLLGKLERLNEAVKIMEN 451 ++P+ EHYAC++DLLG+ RL+EA K++++ Sbjct: 418 IKPQVEHYACMVDLLGRANRLDEAAKMVQD 447 Score = 68.2 bits (165), Expect = 1e-09 Identities = 41/156 (26%), Positives = 73/156 (46%), Gaps = 4/156 (2%) Frame = +2 Query: 2 AGLRQGMMVHRYVVVLGSGCSLELSSALVAMYCKCGMVDSGRRIFDRISRRDVVCWNGMI 181 + L G+ VHR+++ GS L++ L+ MY G VD R++FD+ +R + WN + Sbjct: 91 SSLSDGLRVHRHILDNGSDQDPFLATKLIGMYSDLGSVDYARKVFDKTRKRTIYVWNALF 150 Query: 182 RGYALNGRADEAIELFERMTRYSSTRPNHGTFSGVLAAC----CHGGLVSEGKQYFERMK 349 R L G +E + L+ +M R + T++ VL AC C +++GK+ + Sbjct: 151 RALTLAGHGEEVLGLYWKMNRI-GVESDRFTYTYVLKACVASECTADHLTKGKEIHAHLT 209 Query: 350 RDFGLEPEAEHYACLIDLLGKLERLNEAVKIMENTP 457 R G L+D+ + ++ A + P Sbjct: 210 RR-GYNSHVYIMTTLVDMYARFGCVDYASYVFNGMP 244 Score = 68.2 bits (165), Expect = 1e-09 Identities = 43/148 (29%), Positives = 73/148 (49%), Gaps = 1/148 (0%) Frame = +2 Query: 8 LRQGMMVHRYVVVLGSGCSLELSSALVAMYCKCGMVDSGRRIFDRISRRDVVCWNGMIRG 187 L +G +H ++ G + + + LV MY + G VD +F+ + R+VV W+ MI Sbjct: 198 LTKGKEIHAHLTRRGYNSHVYIMTTLVDMYARFGCVDYASYVFNGMPVRNVVSWSAMIAC 257 Query: 188 YALNGRADEAIELF-ERMTRYSSTRPNHGTFSGVLAACCHGGLVSEGKQYFERMKRDFGL 364 YA NG+A EA+ F E MT + PN T VL AC + +G+ + R GL Sbjct: 258 YAKNGKAFEALRTFREMMTETKDSSPNSVTMVSVLQACASLAALEQGRLIHGYILRR-GL 316 Query: 365 EPEAEHYACLIDLLGKLERLNEAVKIME 448 + + L+ + G+ +L+ ++ + Sbjct: 317 DSILPVISALVTMYGRCGKLDVGQRVFD 344 >ref|XP_006418855.1| hypothetical protein EUTSA_v10002433mg [Eutrema salsugineum] gi|557096783|gb|ESQ37291.1| hypothetical protein EUTSA_v10002433mg [Eutrema salsugineum] Length = 659 Score = 147 bits (372), Expect = 1e-33 Identities = 70/150 (46%), Positives = 101/150 (67%) Frame = +2 Query: 2 AGLRQGMMVHRYVVVLGSGCSLELSSALVAMYCKCGMVDSGRRIFDRISRRDVVCWNGMI 181 A L QG ++H Y++ G L + SALV MY +CG ++ G+R+FDR+ RDVV WN +I Sbjct: 301 AALEQGRLIHGYILRRGLDSILPVISALVTMYGRCGRLEVGQRVFDRMHERDVVSWNSLI 360 Query: 182 RGYALNGRADEAIELFERMTRYSSTRPNHGTFSGVLAACCHGGLVSEGKQYFERMKRDFG 361 Y ++G +AI++FE M ++ P TF VL AC H GLV EGK+ FE M RD G Sbjct: 361 SSYGVHGYGRKAIQIFEEMLANGAS-PTPVTFVSVLGACSHEGLVEEGKRLFESMWRDHG 419 Query: 362 LEPEAEHYACLIDLLGKLERLNEAVKIMEN 451 ++P+ EHYAC++DLLG+ RL+EA K++++ Sbjct: 420 IKPQVEHYACMVDLLGRANRLDEAAKMVQD 449 Score = 71.2 bits (173), Expect = 1e-10 Identities = 44/148 (29%), Positives = 72/148 (48%), Gaps = 1/148 (0%) Frame = +2 Query: 8 LRQGMMVHRYVVVLGSGCSLELSSALVAMYCKCGMVDSGRRIFDRISRRDVVCWNGMIRG 187 L +G +H ++ G + + + L+ MY + G VD +FD + R+VV W+ MI Sbjct: 200 LTKGKEIHAHLTRRGYNSHVYIMTTLLDMYARFGCVDYASHVFDEMPVRNVVSWSAMIAC 259 Query: 188 YALNGRADEAIELF-ERMTRYSSTRPNHGTFSGVLAACCHGGLVSEGKQYFERMKRDFGL 364 YA NG+A EA+ F E MT + PN T VL AC + +G+ + R GL Sbjct: 260 YAKNGKAFEALRTFREMMTETKDSSPNSVTMVSVLQACASLAALEQGRLIHGYILRR-GL 318 Query: 365 EPEAEHYACLIDLLGKLERLNEAVKIME 448 + + L+ + G+ RL ++ + Sbjct: 319 DSILPVISALVTMYGRCGRLEVGQRVFD 346 Score = 66.6 bits (161), Expect = 3e-09 Identities = 40/157 (25%), Positives = 73/157 (46%), Gaps = 5/157 (3%) Frame = +2 Query: 2 AGLRQGMMVHRYVVVLGSGCSLELSSALVAMYCKCGMVDSGRRIFDRISRRDVVCWNGMI 181 + L + VHR+++ GS L++ L+ MY G VD R++FD+ +R + WN + Sbjct: 92 SSLSDALRVHRHILDNGSDQDPFLATKLIGMYSDLGSVDHARKVFDKTRKRTIYVWNALF 151 Query: 182 RGYALNGRADEAIELFERMTRYSSTRPNHGTFSGVLAAC-----CHGGLVSEGKQYFERM 346 R L G +E + L+ +M R + T++ VL AC C +++GK+ + Sbjct: 152 RALTLAGHGEEVLGLYWKMNRI-GVESDRFTYTYVLKACVASPECTADHLTKGKEIHAHL 210 Query: 347 KRDFGLEPEAEHYACLIDLLGKLERLNEAVKIMENTP 457 R G L+D+ + ++ A + + P Sbjct: 211 TRR-GYNSHVYIMTTLLDMYARFGCVDYASHVFDEMP 246 >ref|NP_181269.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana] gi|75216847|sp|Q9ZUT4.1|PP192_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g37320 gi|4056486|gb|AAC98052.1| hypothetical protein [Arabidopsis thaliana] gi|37202040|gb|AAQ89635.1| At2g37320 [Arabidopsis thaliana] gi|51969760|dbj|BAD43572.1| hypothetical protein [Arabidopsis thaliana] gi|330254289|gb|AEC09383.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana] Length = 500 Score = 147 bits (372), Expect = 1e-33 Identities = 73/150 (48%), Positives = 102/150 (68%) Frame = +2 Query: 8 LRQGMMVHRYVVVLGSGCSLELSSALVAMYCKCGMVDSGRRIFDRISRRDVVCWNGMIRG 187 L QG VH + +G L +S++L++MYCKCG + RIFD+ S +DVV WN MI G Sbjct: 237 LGQGRSVHCQTLHMGLKSYLHISNSLISMYCKCGDLKDAFRIFDQFSNKDVVSWNSMIAG 296 Query: 188 YALNGRADEAIELFERMTRYSSTRPNHGTFSGVLAACCHGGLVSEGKQYFERMKRDFGLE 367 YA +G A +AIELFE M S T+P+ T+ GVL++C H GLV EG+++F M + GL+ Sbjct: 297 YAQHGLAMQAIELFELMMPKSGTKPDAITYLGVLSSCRHAGLVKEGRKFFNLM-AEHGLK 355 Query: 368 PEAEHYACLIDLLGKLERLNEAVKIMENTP 457 PE HY+CL+DLLG+ L EA++++EN P Sbjct: 356 PELNHYSCLVDLLGRFGLLQEALELIENMP 385 Score = 66.6 bits (161), Expect = 3e-09 Identities = 43/146 (29%), Positives = 72/146 (49%) Frame = +2 Query: 11 RQGMMVHRYVVVLGSGCSLELSSALVAMYCKCGMVDSGRRIFDRISRRDVVCWNGMIRGY 190 R G H + G + L S+LV +Y G V++ ++F+ + R+VV W MI G+ Sbjct: 137 RTGSGFHCLALKGGFISDVYLGSSLVVLYRDSGEVENAYKVFEEMPERNVVSWTAMISGF 196 Query: 191 ALNGRADEAIELFERMTRYSSTRPNHGTFSGVLAACCHGGLVSEGKQYFERMKRDFGLEP 370 A R D ++L+ +M R S++ PN TF+ +L+AC G + +G+ GL+ Sbjct: 197 AQEWRVDICLKLYSKM-RKSTSDPNDYTFTALLSACTGSGALGQGRS-VHCQTLHMGLKS 254 Query: 371 EAEHYACLIDLLGKLERLNEAVKIME 448 LI + K L +A +I + Sbjct: 255 YLHISNSLISMYCKCGDLKDAFRIFD 280 >ref|XP_006410915.1| hypothetical protein EUTSA_v10017783mg [Eutrema salsugineum] gi|557112084|gb|ESQ52368.1| hypothetical protein EUTSA_v10017783mg [Eutrema salsugineum] Length = 502 Score = 147 bits (371), Expect = 1e-33 Identities = 73/150 (48%), Positives = 102/150 (68%) Frame = +2 Query: 8 LRQGMMVHRYVVVLGSGCSLELSSALVAMYCKCGMVDSGRRIFDRISRRDVVCWNGMIRG 187 L QG VH + +G L +S+AL++MYCKCG + IFD+ S +DVV WN MI G Sbjct: 237 LGQGRSVHCQTLQMGFKSYLHISNALISMYCKCGDLKDAFCIFDQFSNKDVVSWNSMIAG 296 Query: 188 YALNGRADEAIELFERMTRYSSTRPNHGTFSGVLAACCHGGLVSEGKQYFERMKRDFGLE 367 YA +G A +AIELFE M S T+P+ T+ GVL++C H GLV EG++ F+ M+ + GL+ Sbjct: 297 YAQHGLASQAIELFEVMMLKSGTKPDAITYLGVLSSCRHAGLVKEGRKVFDSME-EHGLK 355 Query: 368 PEAEHYACLIDLLGKLERLNEAVKIMENTP 457 PE HY+CL+DLLG+ L EA++++EN P Sbjct: 356 PELSHYSCLVDLLGRFGLLQEALELIENMP 385 Score = 64.3 bits (155), Expect = 2e-08 Identities = 33/106 (31%), Positives = 56/106 (52%) Frame = +2 Query: 11 RQGMMVHRYVVVLGSGCSLELSSALVAMYCKCGMVDSGRRIFDRISRRDVVCWNGMIRGY 190 R G H + G + + S+LV +Y G +D ++F+ + ++VV W MI G+ Sbjct: 137 RSGSGFHCVALKCGFTSDVYVGSSLVVLYRGSGDLDDAHKVFEEMPEKNVVSWTAMISGF 196 Query: 191 ALNGRADEAIELFERMTRYSSTRPNHGTFSGVLAACCHGGLVSEGK 328 A R D + L+ +M R S + PN TF+ +L+AC G + +G+ Sbjct: 197 AQEWRVDICLNLYSKM-RNSRSFPNDYTFTALLSACTGSGALGQGR 241 >gb|EOY03681.1| Pentatricopeptide repeat superfamily protein, putative [Theobroma cacao] Length = 577 Score = 147 bits (371), Expect = 1e-33 Identities = 73/155 (47%), Positives = 108/155 (69%), Gaps = 3/155 (1%) Frame = +2 Query: 2 AGLRQGMMVHRYVVVLGSGC-SLE--LSSALVAMYCKCGMVDSGRRIFDRISRRDVVCWN 172 A + G +H ++V + S C SL + +AL+ MYCKCG ++S + +F RIS +DVV WN Sbjct: 287 ARIEIGKQIHGHIVRVSSRCDSLNEFVFNALIDMYCKCGDMNSAKLLFARISEKDVVSWN 346 Query: 173 GMIRGYALNGRADEAIELFERMTRYSSTRPNHGTFSGVLAACCHGGLVSEGKQYFERMKR 352 +I G+A NG +E++++F M + ++TRPNH TF G L+AC H GLVSEG + + M++ Sbjct: 347 SLITGFAQNGHGEESLDVFRMMIK-ANTRPNHVTFLGALSACNHTGLVSEGLRILDLMEK 405 Query: 353 DFGLEPEAEHYACLIDLLGKLERLNEAVKIMENTP 457 DFG+ P ++HYA LIDLLG+ RL EA+ ++E TP Sbjct: 406 DFGVIPRSDHYAILIDLLGRKNRLEEAMSMIERTP 440 Score = 69.7 bits (169), Expect = 4e-10 Identities = 42/133 (31%), Positives = 67/133 (50%) Frame = +2 Query: 26 VHRYVVVLGSGCSLELSSALVAMYCKCGMVDSGRRIFDRISRRDVVCWNGMIRGYALNGR 205 VH +++V G L + +AL+ Y KCG V+S RIF R+S RDVV W M+ YA R Sbjct: 163 VHGFMIVFGLELDLIVYNALIDAYGKCGEVNSAYRIFCRMSERDVVSWTSMVVAYAKVSR 222 Query: 206 ADEAIELFERMTRYSSTRPNHGTFSGVLAACCHGGLVSEGKQYFERMKRDFGLEPEAEHY 385 ++A +F M N +++G++ G +E F +M + ++P A Y Sbjct: 223 LEDASRVFNEM-----PVKNTVSWTGLITGFAQNGRGNEALNLFWQMLEE-RVQPNAYTY 276 Query: 386 ACLIDLLGKLERL 424 C++ L R+ Sbjct: 277 VCVLSACADLARI 289 >ref|XP_006857329.1| hypothetical protein AMTR_s00067p00084250 [Amborella trichopoda] gi|548861422|gb|ERN18796.1| hypothetical protein AMTR_s00067p00084250 [Amborella trichopoda] Length = 630 Score = 147 bits (370), Expect = 2e-33 Identities = 67/152 (44%), Positives = 103/152 (67%) Frame = +2 Query: 2 AGLRQGMMVHRYVVVLGSGCSLELSSALVAMYCKCGMVDSGRRIFDRISRRDVVCWNGMI 181 A ++G +H Y++ L + AL+ MY KCG+V+ +F+R+ RDVV W MI Sbjct: 352 ASHQKGKEIHHYIIEKELESDLMVGGALIDMYAKCGLVEEAHHVFERLPDRDVVSWTAMI 411 Query: 182 RGYALNGRADEAIELFERMTRYSSTRPNHGTFSGVLAACCHGGLVSEGKQYFERMKRDFG 361 Y NG A++A++LFERM++ S+ +P++ TF VL+AC HGGLV EG YF+RM+ ++G Sbjct: 412 EAYGSNGLANDALKLFERMSQ-SNVKPDNVTFLSVLSACSHGGLVHEGCGYFKRMEMEYG 470 Query: 362 LEPEAEHYACLIDLLGKLERLNEAVKIMENTP 457 + P EHY+C+IDLLG+ +L+EA +I ++ P Sbjct: 471 ISPSLEHYSCMIDLLGRAGKLHEAYEIFKSIP 502 Score = 78.2 bits (191), Expect = 1e-12 Identities = 48/150 (32%), Positives = 77/150 (51%) Frame = +2 Query: 8 LRQGMMVHRYVVVLGSGCSLELSSALVAMYCKCGMVDSGRRIFDRISRRDVVCWNGMIRG 187 L+ G +H YV+ G + + AL+ +Y KCG + +F ++ + +VV WN M+ G Sbjct: 253 LQLGKFIHGYVIKNGIDNDVFIGCALIDLYFKCGNIKHAELLFLKMPKNNVVVWNVMVSG 312 Query: 188 YALNGRADEAIELFERMTRYSSTRPNHGTFSGVLAACCHGGLVSEGKQYFERMKRDFGLE 367 Y G +EA+E+FE M R S+ + + TFS VL+AC +GK+ + + LE Sbjct: 313 YVTRGHYNEALEIFEGM-RKSNIQADAVTFSSVLSACSQIASHQKGKEIHHYI-IEKELE 370 Query: 368 PEAEHYACLIDLLGKLERLNEAVKIMENTP 457 + LID+ K + EA + E P Sbjct: 371 SDLMVGGALIDMYAKCGLVEEAHHVFERLP 400 Score = 71.6 bits (174), Expect = 1e-10 Identities = 43/129 (33%), Positives = 67/129 (51%) Frame = +2 Query: 71 LSSALVAMYCKCGMVDSGRRIFDRISRRDVVCWNGMIRGYALNGRADEAIELFERMTRYS 250 L SA+V MY KCG + R++F+ + ++VV +N +I G A+NG D +ELF RM Sbjct: 173 LGSAIVDMYAKCGCLGMSRKVFEAMPTKNVVSFNSIISGCAMNGDTDSCMELFIRM-EME 231 Query: 251 STRPNHGTFSGVLAACCHGGLVSEGKQYFERMKRDFGLEPEAEHYACLIDLLGKLERLNE 430 +PN T +G+LAAC + GK + ++ G++ + LIDL K + Sbjct: 232 GLKPNSTTLTGLLAACTRTSFLQLGKFIHGYVIKN-GIDNDVFIGCALIDLYFKCGNIKH 290 Query: 431 AVKIMENTP 457 A + P Sbjct: 291 AELLFLKMP 299 Score = 66.2 bits (160), Expect = 4e-09 Identities = 41/155 (26%), Positives = 77/155 (49%), Gaps = 3/155 (1%) Frame = +2 Query: 2 AGLRQ---GMMVHRYVVVLGSGCSLELSSALVAMYCKCGMVDSGRRIFDRISRRDVVCWN 172 AGL+ G +H +++ G + + S+L+ +YCK ++F+ + RDV WN Sbjct: 46 AGLKMIKFGENIHGFLIKSGFEHDIVVMSSLMGVYCKSENFIDACQVFNEMPERDVASWN 105 Query: 173 GMIRGYALNGRADEAIELFERMTRYSSTRPNHGTFSGVLAACCHGGLVSEGKQYFERMKR 352 M+ Y +G+ ++A+E FE+M R + +PN TF+ +AC + GK + E + Sbjct: 106 TMLSCYYQDGQCEKALEFFEKM-RSAGVKPNSVTFTIAFSACARLLALDRGKDFHESIMN 164 Query: 353 DFGLEPEAEHYACLIDLLGKLERLNEAVKIMENTP 457 + + + ++D+ K L + K+ E P Sbjct: 165 S-EIYLDVFLGSAIVDMYAKCGCLGMSRKVFEAMP 198 >ref|NP_190263.1| protein CHLORORESPIRATORY REDUCTION 2 [Arabidopsis thaliana] gi|75207666|sp|Q9STF3.1|PP265_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g46790, chloroplastic; AltName: Full=Protein CHLORORESPIRATORY REDUCTION 2; Flags: Precursor gi|5541680|emb|CAB51186.1| putative protein [Arabidopsis thaliana] gi|110741961|dbj|BAE98921.1| hypothetical protein [Arabidopsis thaliana] gi|332644684|gb|AEE78205.1| protein chlororespiratory reduction 2 [Arabidopsis thaliana] Length = 657 Score = 147 bits (370), Expect = 2e-33 Identities = 70/150 (46%), Positives = 101/150 (67%) Frame = +2 Query: 2 AGLRQGMMVHRYVVVLGSGCSLELSSALVAMYCKCGMVDSGRRIFDRISRRDVVCWNGMI 181 A L QG ++H Y++ G L + SALV MY +CG ++ G+R+FDR+ RDVV WN +I Sbjct: 299 AALEQGKLIHGYILRRGLDSILPVISALVTMYGRCGKLEVGQRVFDRMHDRDVVSWNSLI 358 Query: 182 RGYALNGRADEAIELFERMTRYSSTRPNHGTFSGVLAACCHGGLVSEGKQYFERMKRDFG 361 Y ++G +AI++FE M ++ P TF VL AC H GLV EGK+ FE M RD G Sbjct: 359 SSYGVHGYGKKAIQIFEEMLANGAS-PTPVTFVSVLGACSHEGLVEEGKRLFETMWRDHG 417 Query: 362 LEPEAEHYACLIDLLGKLERLNEAVKIMEN 451 ++P+ EHYAC++DLLG+ RL+EA K++++ Sbjct: 418 IKPQIEHYACMVDLLGRANRLDEAAKMVQD 447 Score = 66.6 bits (161), Expect = 3e-09 Identities = 43/148 (29%), Positives = 71/148 (47%), Gaps = 1/148 (0%) Frame = +2 Query: 8 LRQGMMVHRYVVVLGSGCSLELSSALVAMYCKCGMVDSGRRIFDRISRRDVVCWNGMIRG 187 L +G +H ++ G + + + LV MY + G VD +F + R+VV W+ MI Sbjct: 198 LMKGKEIHAHLTRRGYSSHVYIMTTLVDMYARFGCVDYASYVFGGMPVRNVVSWSAMIAC 257 Query: 188 YALNGRADEAIELFERMTRYS-STRPNHGTFSGVLAACCHGGLVSEGKQYFERMKRDFGL 364 YA NG+A EA+ F M R + + PN T VL AC + +GK + R GL Sbjct: 258 YAKNGKAFEALRTFREMMRETKDSSPNSVTMVSVLQACASLAALEQGKLIHGYILRR-GL 316 Query: 365 EPEAEHYACLIDLLGKLERLNEAVKIME 448 + + L+ + G+ +L ++ + Sbjct: 317 DSILPVISALVTMYGRCGKLEVGQRVFD 344 Score = 63.5 bits (153), Expect = 3e-08 Identities = 40/156 (25%), Positives = 71/156 (45%), Gaps = 4/156 (2%) Frame = +2 Query: 2 AGLRQGMMVHRYVVVLGSGCSLELSSALVAMYCKCGMVDSGRRIFDRISRRDVVCWNGMI 181 + L + VHR+++ GS L++ L+ MY G VD R++FD+ +R + WN + Sbjct: 91 SSLSDALRVHRHILDNGSDQDPFLATKLIGMYSDLGSVDYARKVFDKTRKRTIYVWNALF 150 Query: 182 RGYALNGRADEAIELFERMTRYSSTRPNHGTFSGVLAAC----CHGGLVSEGKQYFERMK 349 R L G +E + L+ +M R + T++ VL AC C + +GK+ + Sbjct: 151 RALTLAGHGEEVLGLYWKMNRI-GVESDRFTYTYVLKACVASECTVNHLMKGKEIHAHLT 209 Query: 350 RDFGLEPEAEHYACLIDLLGKLERLNEAVKIMENTP 457 R G L+D+ + ++ A + P Sbjct: 210 RR-GYSSHVYIMTTLVDMYARFGCVDYASYVFGGMP 244 >ref|XP_004983935.1| PREDICTED: putative pentatricopeptide repeat-containing protein At1g77010, mitochondrial-like isoform X1 [Setaria italica] gi|514818464|ref|XP_004983936.1| PREDICTED: putative pentatricopeptide repeat-containing protein At1g77010, mitochondrial-like isoform X2 [Setaria italica] gi|514818466|ref|XP_004983937.1| PREDICTED: putative pentatricopeptide repeat-containing protein At1g77010, mitochondrial-like isoform X3 [Setaria italica] Length = 685 Score = 146 bits (369), Expect = 2e-33 Identities = 72/148 (48%), Positives = 97/148 (65%) Frame = +2 Query: 17 GMMVHRYVVVLGSGCSLELSSALVAMYCKCGMVDSGRRIFDRISRRDVVCWNGMIRGYAL 196 G + + LG ++S+L+ +YCKCG + +G RIFD I D V WN M+ GYA Sbjct: 457 GEQIFGLAIALGLQSDHIVASSLIDLYCKCGNLANGCRIFDGIDNPDEVLWNSMLIGYAS 516 Query: 197 NGRADEAIELFERMTRYSSTRPNHGTFSGVLAACCHGGLVSEGKQYFERMKRDFGLEPEA 376 NG EA+EL + M + +P+ TF GVL+ACCH GLV EG ++F+RMK DFG+ P A Sbjct: 517 NGYGYEALELLKLM-QSRGVKPSERTFVGVLSACCHSGLVEEGLRWFDRMKEDFGVSPSA 575 Query: 377 EHYACLIDLLGKLERLNEAVKIMENTPF 460 EHYAC+ DLL + RL+EAV+ +EN PF Sbjct: 576 EHYACVTDLLVRAGRLDEAVEFIENMPF 603 Score = 58.2 bits (139), Expect = 1e-06 Identities = 39/124 (31%), Positives = 62/124 (50%) Frame = +2 Query: 77 SALVAMYCKCGMVDSGRRIFDRISRRDVVCWNGMIRGYALNGRADEAIELFERMTRYSST 256 ++++ +Y CG D RRIFD I + + WN MI G++ NG A +A+ELF M + Sbjct: 376 NSMITVYSNCGRTDVARRIFDMIPSKSAISWNSMIVGFSQNGHALDAMELFCEMHQLGLW 435 Query: 257 RPNHGTFSGVLAACCHGGLVSEGKQYFERMKRDFGLEPEAEHYACLIDLLGKLERLNEAV 436 + + VL+A +S G+Q F + GL+ + + LIDL K L Sbjct: 436 L-DKVAIASVLSASSSICSISFGEQIF-GLAIALGLQSDHIVASSLIDLYCKCGNLANGC 493 Query: 437 KIME 448 +I + Sbjct: 494 RIFD 497 Score = 57.4 bits (137), Expect = 2e-06 Identities = 38/142 (26%), Positives = 65/142 (45%) Frame = +2 Query: 17 GMMVHRYVVVLGSGCSLELSSALVAMYCKCGMVDSGRRIFDRISRRDVVCWNGMIRGYAL 196 G H +VV L +L+ MYCKCG +DS R + D + D + ++ GY Sbjct: 193 GRQAHARIVVAKIEIDSVLGCSLIDMYCKCGDLDSARCVHDGLKHVDQFSLSALVHGYTS 252 Query: 197 NGRADEAIELFERMTRYSSTRPNHGTFSGVLAACCHGGLVSEGKQYFERMKRDFGLEPEA 376 G+ EA+ LF+++ P+ ++ +++ C F RM R G+ P + Sbjct: 253 CGQLHEALCLFDKV-----ENPSIAIWNSLISGCVPAYHGDGAFVLFVRMLRS-GMLPNS 306 Query: 377 EHYACLIDLLGKLERLNEAVKI 442 YA ++++ G L L +I Sbjct: 307 STYASVLNMCGFLGLLKPGQQI 328 >ref|XP_004493626.1| PREDICTED: pentatricopeptide repeat-containing protein At2g22410, mitochondrial-like [Cicer arietinum] Length = 666 Score = 146 bits (369), Expect = 2e-33 Identities = 69/152 (45%), Positives = 103/152 (67%), Gaps = 2/152 (1%) Frame = +2 Query: 8 LRQGMMVHRYVVVLGSGCSLE--LSSALVAMYCKCGMVDSGRRIFDRISRRDVVCWNGMI 181 L G +H+Y VV G SL L++ +V MY KCG +D+ +F + R+++ WN MI Sbjct: 396 LNLGYWIHQYFVV-GKRMSLSVTLANVMVDMYAKCGSIDAAAEVFSTMPERNLISWNSMI 454 Query: 182 RGYALNGRADEAIELFERMTRYSSTRPNHGTFSGVLAACCHGGLVSEGKQYFERMKRDFG 361 GYA NGRA +AI +F++M R +P++ TF +L AC HGGL+SEG++YF+ M+R +G Sbjct: 455 AGYAANGRAKQAINVFDQM-RNVGFKPDNITFVSLLTACSHGGLISEGREYFDNMERSYG 513 Query: 362 LEPEAEHYACLIDLLGKLERLNEAVKIMENTP 457 ++P+ EHYAC++DLLG+ L EA K++ N P Sbjct: 514 IKPQREHYACMVDLLGRTGLLEEAYKLITNMP 545 Score = 70.9 bits (172), Expect = 2e-10 Identities = 44/140 (31%), Positives = 66/140 (47%) Frame = +2 Query: 8 LRQGMMVHRYVVVLGSGCSLELSSALVAMYCKCGMVDSGRRIFDRISRRDVVCWNGMIRG 187 L G VH V GCSL L +AL+ MY KCG + + R +FDR+ RDV W M+ G Sbjct: 264 LEMGKKVHEKVKEKCMGCSLSLHNALLVMYVKCGHLIAARELFDRVETRDVYSWTCMVNG 323 Query: 188 YALNGRADEAIELFERMTRYSSTRPNHGTFSGVLAACCHGGLVSEGKQYFERMKRDFGLE 367 YA G + A F++ + + N +++ ++A E + F M GL Sbjct: 324 YAKCGDLESARRFFDQ-----TPQKNVVSWNAMIAGYSQNNKPEESLKLFHEMVGG-GLV 377 Query: 368 PEAEHYACLIDLLGKLERLN 427 P+ ++ G+L LN Sbjct: 378 PDEHTLVSVLSACGQLTCLN 397 Score = 69.3 bits (168), Expect = 5e-10 Identities = 40/116 (34%), Positives = 61/116 (52%) Frame = +2 Query: 2 AGLRQGMMVHRYVVVLGSGCSLELSSALVAMYCKCGMVDSGRRIFDRISRRDVVCWNGMI 181 +G+ +G VH V +G L + + L+ Y + G++ R +FD S +DVV W MI Sbjct: 161 SGVYEGESVHCLVWKMGFDYELLVRNGLIHFYSERGLLKHAREVFDESSDKDVVTWTTMI 220 Query: 182 RGYALNGRADEAIELFERMTRYSSTRPNHGTFSGVLAACCHGGLVSEGKQYFERMK 349 GYA + EA+E+F+ M PN T VL+AC G + GK+ E++K Sbjct: 221 DGYAAQKCSHEAMEVFKLML-LGDVEPNEVTLIAVLSACSEMGDLEMGKKVHEKVK 275 >ref|XP_006290707.1| hypothetical protein CARUB_v10016805mg [Capsella rubella] gi|482559414|gb|EOA23605.1| hypothetical protein CARUB_v10016805mg [Capsella rubella] Length = 657 Score = 146 bits (369), Expect = 2e-33 Identities = 70/150 (46%), Positives = 100/150 (66%) Frame = +2 Query: 2 AGLRQGMMVHRYVVVLGSGCSLELSSALVAMYCKCGMVDSGRRIFDRISRRDVVCWNGMI 181 A L QG ++H Y++ G L + SALV MY +CG ++ G+R+FDR+ RDVV WN +I Sbjct: 299 AALEQGRLIHGYILRRGLDSILPVISALVTMYGRCGKLEVGQRVFDRMDDRDVVSWNSLI 358 Query: 182 RGYALNGRADEAIELFERMTRYSSTRPNHGTFSGVLAACCHGGLVSEGKQYFERMKRDFG 361 Y ++G +AI++FE M +T P TF VL AC H GLV EGK+ FE M D G Sbjct: 359 SSYGVHGYGRKAIQIFEEMLANGAT-PTPVTFVSVLGACSHEGLVEEGKRLFESMWSDHG 417 Query: 362 LEPEAEHYACLIDLLGKLERLNEAVKIMEN 451 ++P+ EHYAC++DLLG+ RL+EA K++++ Sbjct: 418 IKPQVEHYACMVDLLGRANRLDEAAKMVQD 447 Score = 65.1 bits (157), Expect = 9e-09 Identities = 41/148 (27%), Positives = 71/148 (47%), Gaps = 1/148 (0%) Frame = +2 Query: 8 LRQGMMVHRYVVVLGSGCSLELSSALVAMYCKCGMVDSGRRIFDRISRRDVVCWNGMIRG 187 L +G +H ++ G + + + L+ MY + G VD +F+ + ++VV W+ MI Sbjct: 198 LTKGKEIHAHLTRRGYNSHVYIMTTLLDMYARFGCVDYASYVFNGMPVKNVVSWSAMIAC 257 Query: 188 YALNGRADEAIELF-ERMTRYSSTRPNHGTFSGVLAACCHGGLVSEGKQYFERMKRDFGL 364 YA NG+A EA+ F E MT PN T VL AC + +G+ + R GL Sbjct: 258 YAKNGKAFEALRTFREMMTETKDASPNSVTMVSVLQACASLAALEQGRLIHGYILRR-GL 316 Query: 365 EPEAEHYACLIDLLGKLERLNEAVKIME 448 + + L+ + G+ +L ++ + Sbjct: 317 DSILPVISALVTMYGRCGKLEVGQRVFD 344 Score = 62.4 bits (150), Expect = 6e-08 Identities = 38/148 (25%), Positives = 68/148 (45%), Gaps = 4/148 (2%) Frame = +2 Query: 26 VHRYVVVLGSGCSLELSSALVAMYCKCGMVDSGRRIFDRISRRDVVCWNGMIRGYALNGR 205 VHR+++ G L++ L+ MY G VD R++FD+ +R + WN + R L G Sbjct: 99 VHRHILDNGFDQDPFLATKLIGMYSDLGSVDYARKVFDKTHKRTIYVWNALFRALTLAGH 158 Query: 206 ADEAIELFERMTRYSSTRPNHGTFSGVLAAC----CHGGLVSEGKQYFERMKRDFGLEPE 373 +E + L+ +M R + T++ VL AC C +++GK+ + R G Sbjct: 159 GEEVLGLYWKMNRI-GVESDRFTYTYVLKACVASECTANCLTKGKEIHAHLTRR-GYNSH 216 Query: 374 AEHYACLIDLLGKLERLNEAVKIMENTP 457 L+D+ + ++ A + P Sbjct: 217 VYIMTTLLDMYARFGCVDYASYVFNGMP 244 >tpg|DAA61049.1| TPA: hypothetical protein ZEAMMB73_995105 [Zea mays] Length = 824 Score = 146 bits (369), Expect = 2e-33 Identities = 73/153 (47%), Positives = 99/153 (64%) Frame = +2 Query: 2 AGLRQGMMVHRYVVVLGSGCSLELSSALVAMYCKCGMVDSGRRIFDRISRRDVVCWNGMI 181 A L GM +H ++ G G + +AL+AMY KCG ++ F+ + RDVV WN MI Sbjct: 466 AALECGMQLHSRLIKAGYGVGCFVGNALLAMYFKCGSMEEAHSAFEEMEERDVVSWNTMI 525 Query: 182 RGYALNGRADEAIELFERMTRYSSTRPNHGTFSGVLAACCHGGLVSEGKQYFERMKRDFG 361 GYA +G EA+E+F+ M R +ST+P+ T GVLAAC H GLV +G YF M RDFG Sbjct: 526 AGYARHGFGKEALEVFDTM-RKTSTKPDDITLVGVLAACSHSGLVEKGISYFYSMHRDFG 584 Query: 362 LEPEAEHYACLIDLLGKLERLNEAVKIMENTPF 460 + + EHY C+IDLLG+ RL+EAV +M++ PF Sbjct: 585 VATKPEHYTCMIDLLGRAGRLDEAVNLMKDMPF 617 >ref|XP_002282081.2| PREDICTED: pentatricopeptide repeat-containing protein At2g20540-like [Vitis vinifera] Length = 541 Score = 146 bits (369), Expect = 2e-33 Identities = 70/150 (46%), Positives = 103/150 (68%) Frame = +2 Query: 8 LRQGMMVHRYVVVLGSGCSLELSSALVAMYCKCGMVDSGRRIFDRISRRDVVCWNGMIRG 187 L G +H Y G ++ + +AL+ MY KCG +D GRR+FD+++ RDV+ W+ MI G Sbjct: 265 LELGKWIHFYADKAGFLRNICVCNALIEMYAKCGSIDEGRRLFDQMNERDVISWSTMIVG 324 Query: 188 YALNGRADEAIELFERMTRYSSTRPNHGTFSGVLAACCHGGLVSEGKQYFERMKRDFGLE 367 A +GRA EAIELF+ M + + PN TF G+L+AC H GL++EG +YFE MKRD+ +E Sbjct: 325 LANHGRAHEAIELFQEMQK-AKIEPNIITFVGLLSACAHAGLLNEGLRYFESMKRDYNIE 383 Query: 368 PEAEHYACLIDLLGKLERLNEAVKIMENTP 457 P EHY CL++LLG RL++A+++++ P Sbjct: 384 PGVEHYGCLVNLLGLSGRLDQALELIKKMP 413 Score = 60.8 bits (146), Expect = 2e-07 Identities = 32/119 (26%), Positives = 61/119 (51%) Frame = +2 Query: 17 GMMVHRYVVVLGSGCSLELSSALVAMYCKCGMVDSGRRIFDRISRRDVVCWNGMIRGYAL 196 G VH +V G + + ++LV MY KC +D ++F+ ++ RD V WN +I G+ Sbjct: 136 GKQVHGHVFKFGQKSNTVVENSLVEMYVKCDSLDDAHKVFEEMTERDAVSWNTLISGHVR 195 Query: 197 NGRADEAIELFERMTRYSSTRPNHGTFSGVLAACCHGGLVSEGKQYFERMKRDFGLEPE 373 G+ A +FE M + +++ +++ G ++ ++F RM+ G+EP+ Sbjct: 196 LGQMRRARAIFEEMQDKTIF-----SWTAIVSGYARIGCYADALEFFRRMQM-VGIEPD 248 >ref|XP_006646434.1| PREDICTED: pentatricopeptide repeat-containing protein At3g14730-like [Oryza brachyantha] Length = 613 Score = 145 bits (367), Expect = 4e-33 Identities = 74/154 (48%), Positives = 98/154 (63%), Gaps = 4/154 (2%) Frame = +2 Query: 2 AGLRQGMMVHRYVVVLGSGCSLELS----SALVAMYCKCGMVDSGRRIFDRISRRDVVCW 169 A L+ G VH Y+V G C L +ALV MY K G +D RR+FD++ +RDV W Sbjct: 321 AALQVGREVHGYIVTSGLDCCGLLDVFACNALVDMYAKSGALDEARRVFDQMQQRDVASW 380 Query: 170 NGMIRGYALNGRADEAIELFERMTRYSSTRPNHGTFSGVLAACCHGGLVSEGKQYFERMK 349 N MI GYA +G EA+ELF +MT P+ T G L+AC H GLV EGK + +RMK Sbjct: 381 NIMIDGYASHGHGKEALELFRQMTEVERLLPDEITLLGALSACSHSGLVEEGKDFLKRMK 440 Query: 350 RDFGLEPEAEHYACLIDLLGKLERLNEAVKIMEN 451 +F LEP+ EHYAC+ D+LG+ RL+EA K++E+ Sbjct: 441 DEFCLEPQLEHYACVTDMLGRAGRLDEARKVVED 474 Score = 69.7 bits (169), Expect = 4e-10 Identities = 41/145 (28%), Positives = 67/145 (46%) Frame = +2 Query: 14 QGMMVHRYVVVLGSGCSLELSSALVAMYCKCGMVDSGRRIFDRISRRDVVCWNGMIRGYA 193 Q + +H G L +SAL+ + G+ D RR+F + RDVV WN M+ G+A Sbjct: 120 QILALHALSFRCGLAHELFCASALLRACLRFGLADHARRLFGELPHRDVVVWNAMVNGFA 179 Query: 194 LNGRADEAIELFERMTRYSSTRPNHGTFSGVLAACCHGGLVSEGKQYFERMKRDFGLEPE 373 G D A+E F M + T +G+L+ C + G + + + G E Sbjct: 180 NLGCFDHAVECFRMMREEGEVEISSFTVTGILSVCTATADLGRGAAFHGLVVKS-GFAQE 238 Query: 374 AEHYACLIDLLGKLERLNEAVKIME 448 L+DL GK ++++A ++ E Sbjct: 239 VSVCNALVDLYGKCHKVDDASRVFE 263 Score = 57.4 bits (137), Expect = 2e-06 Identities = 50/157 (31%), Positives = 79/157 (50%), Gaps = 8/157 (5%) Frame = +2 Query: 2 AGLRQGMMVHRYVVVLGSGCSLELSSALVAMYCKCGMVDSGRRIFDRIS--RRDVVCWNG 175 A L +G H VV G + + +ALV +Y KC VD R+F+ ++ +D+ WN Sbjct: 218 ADLGRGAAFHGLVVKSGFAQEVSVCNALVDLYGKCHKVDDASRVFEGMADMDKDLFSWNS 277 Query: 176 MIRGYALNGRADEA--IELFERMTRYSSTRPNHGTFSGVLAACCHGGLVSEGKQYFERMK 349 M+ AL+ AD A I+LF RM R + PN T + VL AC + G++ + Sbjct: 278 MLS--ALHYSADYAGTIKLFSRM-RCVAVWPNAVTVAAVLPACAQTAALQVGREVHGYIV 334 Query: 350 RDFGLE--PEAEHYAC--LIDLLGKLERLNEAVKIME 448 GL+ + +AC L+D+ K L+EA ++ + Sbjct: 335 TS-GLDCCGLLDVFACNALVDMYAKSGALDEARRVFD 370 >ref|XP_002313416.2| chlororespiratory reduction 2 family protein [Populus trichocarpa] gi|550331005|gb|EEE87371.2| chlororespiratory reduction 2 family protein [Populus trichocarpa] Length = 650 Score = 145 bits (367), Expect = 4e-33 Identities = 70/150 (46%), Positives = 96/150 (64%) Frame = +2 Query: 2 AGLRQGMMVHRYVVVLGSGCSLELSSALVAMYCKCGMVDSGRRIFDRISRRDVVCWNGMI 181 A L QG ++H Y++ G L + SALV MY +CG ++ G+R+FD++ +RDVV WN +I Sbjct: 292 AALEQGRLIHGYILRKGLDSILPVISALVTMYARCGKLELGQRVFDQMDKRDVVSWNSLI 351 Query: 182 RGYALNGRADEAIELFERMTRYSSTRPNHGTFSGVLAACCHGGLVSEGKQYFERMKRDFG 361 Y ++G +AI +FE MT Y+ P+ +F VL AC H GLV EGK F M G Sbjct: 352 SSYGVHGFGKKAIGIFEEMT-YNGVEPSPVSFVSVLGACSHAGLVDEGKMLFSSMHVAHG 410 Query: 362 LEPEAEHYACLIDLLGKLERLNEAVKIMEN 451 + P EHYAC++DLLG+ RL EA KI+EN Sbjct: 411 ICPSVEHYACMVDLLGRANRLEEAAKIIEN 440 Score = 64.7 bits (156), Expect = 1e-08 Identities = 37/108 (34%), Positives = 58/108 (53%), Gaps = 1/108 (0%) Frame = +2 Query: 8 LRQGMMVHRYVVVLGSGCSLELSSALVAMYCKCGMVDSGRRIFDRISRRDVVCWNGMIRG 187 L +G +H +++ G + + + LV MY K G V + +F+++ ++VV W+ MI Sbjct: 191 LNKGREIHAHILRHGYDGYVHIMTTLVDMYAKFGCVSNASCVFNQMPVKNVVSWSAMIAC 250 Query: 188 YALNGRADEAIELF-ERMTRYSSTRPNHGTFSGVLAACCHGGLVSEGK 328 YA NG+A EA+ELF E M PN T VL AC + +G+ Sbjct: 251 YAKNGKAFEALELFRELMLETQDLCPNSVTMVSVLQACAALAALEQGR 298 Score = 55.5 bits (132), Expect = 7e-06 Identities = 36/154 (23%), Positives = 70/154 (45%), Gaps = 4/154 (2%) Frame = +2 Query: 8 LRQGMMVHRYVVVLGSGCSLELSSALVAMYCKCGMVDSGRRIFDRISRRDVVCWNGMIRG 187 L VHR+++ G L++ L+ MY +D+ R++FD+ R + +N + R Sbjct: 86 LLDAQRVHRHLLENGFDQDPFLATKLINMYSFFDSIDNARKVFDKTRNRTIYVYNALFRA 145 Query: 188 YALNGRADEAIELFERMTRYSSTRPNHGTFSGVLAAC----CHGGLVSEGKQYFERMKRD 355 +L G +E + ++ RM + T++ VL AC C L+++G++ + R Sbjct: 146 LSLAGHGEEVLNMYRRMNSI-GIPSDRFTYTYVLKACVASECFVSLLNKGREIHAHILR- 203 Query: 356 FGLEPEAEHYACLIDLLGKLERLNEAVKIMENTP 457 G + L+D+ K ++ A + P Sbjct: 204 HGYDGYVHIMTTLVDMYAKFGCVSNASCVFNQMP 237 >ref|XP_004516023.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430, chloroplastic-like [Cicer arietinum] Length = 925 Score = 145 bits (367), Expect = 4e-33 Identities = 71/149 (47%), Positives = 96/149 (64%) Frame = +2 Query: 14 QGMMVHRYVVVLGSGCSLELSSALVAMYCKCGMVDSGRRIFDRISRRDVVCWNGMIRGYA 193 QG +H + + G + SS+LV MY KCG ++ R F I +R +V W+ MI G A Sbjct: 571 QGKQLHVHAIKFGFMSDIFASSSLVNMYAKCGSIEDAHRAFSEIPQRGIVLWSAMIGGLA 630 Query: 194 LNGRADEAIELFERMTRYSSTRPNHGTFSGVLAACCHGGLVSEGKQYFERMKRDFGLEPE 373 +G EA++LF +M + T PNH T VL AC H GLVSEGKQYFE M+ FG++P Sbjct: 631 QHGHGKEALKLFNQMLKDGVT-PNHITLVSVLCACNHAGLVSEGKQYFETMEEKFGIKPT 689 Query: 374 AEHYACLIDLLGKLERLNEAVKIMENTPF 460 EHYAC+IDLLG+ +LNEAV+++ + PF Sbjct: 690 QEHYACMIDLLGRSGKLNEAVELVNSIPF 718 Score = 68.2 bits (165), Expect = 1e-09 Identities = 46/148 (31%), Positives = 70/148 (47%), Gaps = 3/148 (2%) Frame = +2 Query: 8 LRQGMMVHRYVVVLGSGCSLELSSALVAMYCKCGMVDSGRRIFDRISRRDVVCWNGMIRG 187 L G VH VV G +++ LV MY KCGM R++F + R VV WN ++ Sbjct: 165 LNMGKKVHAMTVVSGFESDSFVATTLVVMYAKCGMFGDSRKLFGMVVERSVVLWNTLVSC 224 Query: 188 YALNGRADEAIELFERMTRYSSTRPNHGTFSGVLAACC---HGGLVSEGKQYFERMKRDF 358 Y + EA++LF+ M + RPN + S +L AC GGL G+ + + Sbjct: 225 YVQSDFLAEAVDLFKGMVD-AEVRPNEFSLSIILNACAGLRDGGL---GRMVHGLLMK-L 279 Query: 359 GLEPEAEHYACLIDLLGKLERLNEAVKI 442 G + L+D+ K R+ +AV + Sbjct: 280 GHSYDQFSTNALVDMYAKAGRIEDAVSV 307 Score = 68.2 bits (165), Expect = 1e-09 Identities = 51/157 (32%), Positives = 76/157 (48%), Gaps = 5/157 (3%) Frame = +2 Query: 2 AGLRQG---MMVHRYVVVLGSGCSLELSSALVAMYCKCGMVDSGRRIFDRISRRDVVCWN 172 AGLR G MVH ++ LG ++ALV MY K G ++ +F I D V WN Sbjct: 261 AGLRDGGLGRMVHGLLMKLGHSYDQFSTNALVDMYAKAGRIEDAVSVFREIIHPDTVSWN 320 Query: 173 GMIRGYALNGRADEAIELFERMTRYSSTRPNHGTFSGVLAACCHGGLVSEGKQYFERMKR 352 +I G L+ +D A+ L M R S T PN T S L AC L G+Q + + Sbjct: 321 AVIAGCVLHEYSDLALILLNEM-RNSGTCPNVFTLSSALKACAAMRLKELGRQLHSCLVK 379 Query: 353 DFGLEPEAEHYAC--LIDLLGKLERLNEAVKIMENTP 457 ++ +++ + LIDL K E +++A + + P Sbjct: 380 ---IDSDSDLFVAVGLIDLYSKCEMMDDARRAYDLMP 413 Score = 58.9 bits (141), Expect = 7e-07 Identities = 40/144 (27%), Positives = 68/144 (47%) Frame = +2 Query: 17 GMMVHRYVVVLGSGCSLELSSALVAMYCKCGMVDSGRRIFDRISRRDVVCWNGMIRGYAL 196 G +H +V + S L ++ L+ +Y KC M+D RR +D + ++D++ N +I GY+ Sbjct: 370 GRQLHSCLVKIDSDSDLFVAVGLIDLYSKCEMMDDARRAYDLMPKKDIIACNALITGYSQ 429 Query: 197 NGRADEAIELFERMTRYSSTRPNHGTFSGVLAACCHGGLVSEGKQYFERMKRDFGLEPEA 376 G +A+ LF M + N T S VL + + KQ + G+ + Sbjct: 430 FGDDLQAVSLFSEM-HHEIIDFNQTTLSTVLKSVASLQEIKICKQ-IHTLSIKSGICSDF 487 Query: 377 EHYACLIDLLGKLERLNEAVKIME 448 L+D GK ++EA KI + Sbjct: 488 YVINSLLDTYGKCSHIDEASKIFD 511 Score = 55.5 bits (132), Expect = 7e-06 Identities = 35/144 (24%), Positives = 67/144 (46%) Frame = +2 Query: 26 VHRYVVVLGSGCSLELSSALVAMYCKCGMVDSGRRIFDRISRRDVVCWNGMIRGYALNGR 205 +H + G + ++L+ Y KC +D +IFD + D+V + MI Y+ G Sbjct: 474 IHTLSIKSGICSDFYVINSLLDTYGKCSHIDEASKIFDERTWEDLVAYTSMITAYSQYGD 533 Query: 206 ADEAIELFERMTRYSSTRPNHGTFSGVLAACCHGGLVSEGKQYFERMKRDFGLEPEAEHY 385 +EA++L+ +M + S +P+ S +L AC + +GKQ + FG + Sbjct: 534 GEEALKLYLQM-QVSDIKPDSFVCSSLLNACANLSAYEQGKQLHVHAIK-FGFMSDIFAS 591 Query: 386 ACLIDLLGKLERLNEAVKIMENTP 457 + L+++ K + +A + P Sbjct: 592 SSLVNMYAKCGSIEDAHRAFSEIP 615 >gb|EMT12971.1| hypothetical protein F775_10400 [Aegilops tauschii] Length = 688 Score = 144 bits (363), Expect = 1e-32 Identities = 72/148 (48%), Positives = 96/148 (64%) Frame = +2 Query: 17 GMMVHRYVVVLGSGCSLELSSALVAMYCKCGMVDSGRRIFDRISRRDVVCWNGMIRGYAL 196 G + VLG ++S+++ +YCKCG + +G +IFD I + D V WN M+ GYA Sbjct: 459 GEQIFSLATVLGLQSDHVVASSVIDLYCKCGNLANGCKIFDGIDKPDEVMWNSMLIGYAS 518 Query: 197 NGRADEAIELFERMTRYSSTRPNHGTFSGVLAACCHGGLVSEGKQYFERMKRDFGLEPEA 376 NG +A+EL E M R S RP TF GVL+ACCH GLV EG +F++M+ DF L P A Sbjct: 519 NGHGRKALELLELM-RVSGVRPTERTFVGVLSACCHSGLVEEGLTWFKQMQEDFCLIPSA 577 Query: 377 EHYACLIDLLGKLERLNEAVKIMENTPF 460 EHYAC+ DLL + RL+EAV+ +EN PF Sbjct: 578 EHYACVTDLLVRAGRLDEAVEFIENMPF 605 Score = 73.2 bits (178), Expect = 3e-11 Identities = 44/131 (33%), Positives = 69/131 (52%) Frame = +2 Query: 17 GMMVHRYVVVLGSGCSLELSSALVAMYCKCGMVDSGRRIFDRISRRDVVCWNGMIRGYAL 196 G VH +V LS ALV MYCKCG VDS RR+FD +++ D + ++ GYA Sbjct: 195 GRQVHGRMVTAKIELDSVLSCALVDMYCKCGDVDSARRVFDGLAQIDEFSVSALVYGYAS 254 Query: 197 NGRADEAIELFERMTRYSSTRPNHGTFSGVLAACCHGGLVSEGKQYFERMKRDFGLEPEA 376 G+ DEA+ +F+R+ N ++ +++ C L + F RM R L P++ Sbjct: 255 RGQLDEALHIFDRVENL-----NILLWNSLISGCALACLGDDAFALFVRMMRSDAL-PDS 308 Query: 377 EHYACLIDLLG 409 YA ++++ G Sbjct: 309 STYASVLNVCG 319 Score = 59.3 bits (142), Expect = 5e-07 Identities = 35/124 (28%), Positives = 64/124 (51%) Frame = +2 Query: 77 SALVAMYCKCGMVDSGRRIFDRISRRDVVCWNGMIRGYALNGRADEAIELFERMTRYSST 256 ++++ +Y CG + +R+F I+ + V+ WN ++ G + NG A +A+ELF +M R Sbjct: 378 NSMITVYSNCGRTEEAKRVFSMITSKSVISWNSLVVGLSQNGHAIDAMELFCKMHRL-GV 436 Query: 257 RPNHGTFSGVLAACCHGGLVSEGKQYFERMKRDFGLEPEAEHYACLIDLLGKLERLNEAV 436 R + + L+A + +S G+Q F + GL+ + + +IDL K L Sbjct: 437 RLDKVAIASALSASSNICSISFGEQIFS-LATVLGLQSDHVVASSVIDLYCKCGNLANGC 495 Query: 437 KIME 448 KI + Sbjct: 496 KIFD 499