BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra25_contig00027677
         (531 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN74984.1| hypothetical protein VITISV_035210 [Vitis vinifera]   125   8e-27
gb|EOY11267.1| Uncharacterized protein TCM_026511 [Theobroma cacao]   119   6e-25
gb|EOY13153.1| Uncharacterized protein TCM_031677 [Theobroma cacao]   116   4e-24
emb|CAN65188.1| hypothetical protein VITISV_004365 [Vitis vinifera]   115   6e-24
gb|EOY17849.1| Copia-like retrotransposable element, putative [T...   115   8e-24
gb|AAG60117.1|AC073555_1 copia-type polyprotein, putative [Arabi...   115   8e-24
gb|AAG50698.1|AC079604_5 copia-type polyprotein, putative [Arabi...   115   8e-24
emb|CAN74029.1| hypothetical protein VITISV_013540 [Vitis vinifera]   115   8e-24
gb|EXB44219.1| ABC transporter C family member 9 [Morus notabilis]    114   1e-23
gb|AAF16534.1|AC013482_8 T26F17.17 [Arabidopsis thaliana]             114   1e-23
emb|CAB71063.1| copia-type polyprotein [Arabidopsis thaliana]         114   1e-23
gb|AAD50001.1|AC007259_14 Hypothetical protein [Arabidopsis thal...   114   1e-23
emb|CAD41731.1| OSJNBb0034I13.10 [Oryza sativa Japonica Group]        113   3e-23
gb|AAS90682.1| pupative polyprotein [Oryza sativa Japonica Group]     112   4e-23
ref|NP_001174195.1| Os05g0126900 [Oryza sativa Japonica Group] g...   112   4e-23
emb|CAN76698.1| hypothetical protein VITISV_011792 [Vitis vinifera]   112   5e-23
dbj|BAB11200.1| copia-type polyprotein [Arabidopsis thaliana] gi...   110   2e-22
gb|AAF79483.1|AC022492_27 F1L3.20 [Arabidopsis thaliana]              110   2e-22
gb|AAG51247.1|AC055769_6 copia-type polyprotein, putative; 28768...   110   2e-22
gb|AAF97299.1|AC007843_2 Similar to copia-type reverse transcrip...   110   2e-22

>emb|CAN74984.1| hypothetical protein VITISV_035210 [Vitis vinifera]
          Length = 2408

 Score =  125 bits (313), Expect = 8e-27
 Identities = 63/161 (39%), Positives = 95/161 (59%), Gaps = 1/161 (0%)
 Frame = -2

Query: 500  ITAFHVNDIFLTGQNSKKIWSFKRDLEERF*VTDLGNAKYYLGIQICKRGESLILHQGAY 321
            I + +V+D+  TG N      FK  ++  F +TDLG  KY+L +++ +  E + + Q  Y
Sbjct: 719  IVSLYVDDLIFTGNNESMFVKFKNSMKLEFDMTDLGKMKYFLNVEVLQNLEGIYISQRKY 778

Query: 320  IXXXXXXXXXXXXXXXKNPLDPGVNLFKDSD-NKANPETYRSLMGSLLYLTYTRPDIHFA 144
                            KNP+ PGV L KD + +K N   Y+ L+GSL++LT TRPD+ + 
Sbjct: 779  AKDVLEWFRMEKSNSVKNPIVPGVRLMKDEEGSKVNATMYKQLVGSLMHLTATRPDLMYV 838

Query: 143  VCYLSRFMQSPTEIQLKAARNILRYVKETINLGLPYDKLDN 21
            V  +SRFM SPTE+ L+AA+ +LRY+K T++LG+ Y K  N
Sbjct: 839  VSLISRFMASPTELHLQAAKRVLRYLKGTVDLGILYQKEGN 879



 Score = 63.5 bits (153), Expect = 3e-08
 Identities = 37/117 (31%), Positives = 58/117 (49%), Gaps = 1/117 (0%)
 Frame = -2

Query: 488  HVNDIFLTGQNSKKIWSFKRDLEERF*VTDLGNAKYYLGIQICKRGESLILHQGAYIXXX 309
            +V+D+ +TG +   I   K  L ++F + DLG+  Y+LG++I    + L + Q  Y    
Sbjct: 2143 YVDDMIITGNDLSGIQELKDFLSQQFEMKDLGHLSYFLGLEITHSTDGLYITQAKYASDL 2202

Query: 308  XXXXXXXXXXXXKNPLDPGVNLFKDSDNK-ANPETYRSLMGSLLYLTYTRPDIHFAV 141
                           ++   +L        +NP  YR L+GSL+YLT TRPDI +AV
Sbjct: 2203 LSQAGLTDSKNVDTLVELNAHLTPSRGKPLSNPSLYRRLVGSLVYLTVTRPDISYAV 2259


>gb|EOY11267.1| Uncharacterized protein TCM_026511 [Theobroma cacao]
          Length = 1318

 Score =  119 bits (297), Expect = 6e-25
 Identities = 63/161 (39%), Positives = 92/161 (57%), Gaps = 1/161 (0%)
 Frame = -2

Query: 500  ITAFHVNDIFLTGQNSKKIWSFKRDLEERF*VTDLGNAKYYLGIQICKRGESLILHQGAY 321
            I + +V+D+ +TG N   + SF+  ++  F ++DLG   Y+LG++I +R + + LHQ  Y
Sbjct: 996  IVSVYVDDLLITGPNKSDLNSFRNKMKSEFDMSDLGEMSYFLGLEIQQRSDFICLHQKKY 1055

Query: 320  IXXXXXXXXXXXXXXXKNPLDPGVNLFKDSDNKANPET-YRSLMGSLLYLTYTRPDIHFA 144
                              PL  G  L KD  +     T YR L+G LLYL+ +RPDI + 
Sbjct: 1056 AGELLKRFKMEGCKPVSTPLTTGTKLCKDDGSTLVDVTQYRKLIGCLLYLSASRPDIMYT 1115

Query: 143  VCYLSRFMQSPTEIQLKAARNILRYVKETINLGLPYDKLDN 21
               LSRFMQSPT+  L AA+ +LRYVK T+N GL Y +++N
Sbjct: 1116 TSLLSRFMQSPTKTHLTAAKRVLRYVKGTLNYGLLYGQVEN 1156


>gb|EOY13153.1| Uncharacterized protein TCM_031677 [Theobroma cacao]
          Length = 1061

 Score =  116 bits (290), Expect = 4e-24
 Identities = 65/165 (39%), Positives = 91/165 (55%), Gaps = 1/165 (0%)
 Frame = -2

Query: 500  ITAFHVNDIFLTGQNSKKIWSFKRDLEERF*VTDLGNAKYYLGIQICKRGESLILHQGAY 321
            I + +V+D+ +T  + K +  FK  ++  F ++DLG   Y+LG++I +  + ++LHQ  Y
Sbjct: 801  IISLYVDDMLITSPSGKFVDDFKAKMQTEFEMSDLGRMSYFLGMEIDQGSDFILLHQRKY 860

Query: 320  IXXXXXXXXXXXXXXXKNPLDPGVNLFKDSDNKANPETY-RSLMGSLLYLTYTRPDIHFA 144
                              PL  G  L KD     N ETY R L+GSLLYL+ TRPDI +A
Sbjct: 861  ASDLLKRFKMEKCKAVATPLAVGTKLCKDDGGAENNETYYRRLIGSLLYLSSTRPDIMYA 920

Query: 143  VCYLSRFMQSPTEIQLKAARNILRYVKETINLGLPYDKLDNL*LQ 9
               LSRFM  P+E+ L A + ILRYVK T+  GL + K  N  LQ
Sbjct: 921  TSLLSRFMHKPSEVHLCAVKRILRYVKGTLRFGLKFSKNGNQKLQ 965


>emb|CAN65188.1| hypothetical protein VITISV_004365 [Vitis vinifera]
          Length = 1265

 Score =  115 bits (288), Expect = 6e-24
 Identities = 55/158 (34%), Positives = 91/158 (57%), Gaps = 1/158 (0%)
 Frame = -2

Query: 500  ITAFHVNDIFLTGQNSKKIWSFKRDLEERF*VTDLGNAKYYLGIQICKRGESLILHQGAY 321
            I + +V+D+  TG +      FKR +++ F +TDLG  +Y+LG+++ +R + + + Q  Y
Sbjct: 972  IVSLYVDDLIFTGNDELMFTDFKRSMKDEFDMTDLGKMRYFLGLEVLQRSDGIFISQKKY 1031

Query: 320  IXXXXXXXXXXXXXXXKNPLDPGVNLFKDSDN-KANPETYRSLMGSLLYLTYTRPDIHFA 144
                             NP+ PG  L KD    K +   Y+ ++GSL+YL  TRPD+ F 
Sbjct: 1032 ALEVLQRFGMDKSNSVHNPIVPGFKLMKDEGGVKVDKTYYKQVVGSLMYLXATRPDMMFV 1091

Query: 143  VCYLSRFMQSPTEIQLKAARNILRYVKETINLGLPYDK 30
            V  +SR+M++PTE+ L+AA+ +LRY++ T   G+ Y K
Sbjct: 1092 VSLISRYMENPTELHLQAAKRVLRYLQGTTEFGIFYRK 1129


>gb|EOY17849.1| Copia-like retrotransposable element, putative [Theobroma cacao]
          Length = 1090

 Score =  115 bits (287), Expect = 8e-24
 Identities = 61/162 (37%), Positives = 91/162 (56%), Gaps = 1/162 (0%)
 Frame = -2

Query: 506  PFITAFHVNDIFLTGQNSKKIWSFKRDLEERF*VTDLGNAKYYLGIQICKRGESLILHQG 327
            P I + +V+D+ +TG + ++I   K +++ RF +TDLG   Y++G+QI +    + + Q 
Sbjct: 892  PLIISLYVDDMLVTGGDDQRISKLKLEMQSRFRMTDLGQMSYFVGLQILQGNSRIFICQS 951

Query: 326  AYIXXXXXXXXXXXXXXXKNPLDPGVNLFKDSDNKA-NPETYRSLMGSLLYLTYTRPDIH 150
             YI                 PL P   L  D  +   NP T+RSL+GSLLY+  +RP++ 
Sbjct: 952  NYIGEVLDKFKMTDCKTVATPLIPHEKLSVDKGSALENPSTFRSLIGSLLYICASRPNLM 1011

Query: 149  FAVCYLSRFMQSPTEIQLKAARNILRYVKETINLGLPYDKLD 24
            FA  YLSRFMQ PT     AA+ +LRY+K T N GL +  +D
Sbjct: 1012 FAASYLSRFMQVPTTEHFPAAKRVLRYLKGTANFGLQFTYID 1053


>gb|AAG60117.1|AC073555_1 copia-type polyprotein, putative [Arabidopsis thaliana]
          Length = 1352

 Score =  115 bits (287), Expect = 8e-24
 Identities = 58/156 (37%), Positives = 88/156 (56%), Gaps = 1/156 (0%)
 Frame = -2

Query: 500  ITAFHVNDIFLTGQNSKKIWSFKRDLEERF*VTDLGNAKYYLGIQICKRGESLILHQGAY 321
            I   +V+D+  TG N      FK+++ + F +TD+G   YYLGI++ +    + + Q  Y
Sbjct: 1027 IACLYVDDLIFTGNNPSMFEEFKKEMTKEFEMTDIGLMSYYLGIEVKQEDNGIFITQEGY 1086

Query: 320  IXXXXXXXXXXXXXXXKNPLDPGVNLFKDSDNKA-NPETYRSLMGSLLYLTYTRPDIHFA 144
                              P++ G+ L K  + +  +P T++SL+GSL YLT TRPDI +A
Sbjct: 1087 AKEVLKKFKMDDSNPVCTPMECGIKLSKKEEGEGVDPTTFKSLVGSLRYLTCTRPDILYA 1146

Query: 143  VCYLSRFMQSPTEIQLKAARNILRYVKETINLGLPY 36
            V  +SR+M+ PT    KAA+ ILRY+K T+N GL Y
Sbjct: 1147 VGVVSRYMEHPTTTHFKAAKRILRYIKGTVNFGLHY 1182


>gb|AAG50698.1|AC079604_5 copia-type polyprotein, putative [Arabidopsis thaliana]
            gi|12321387|gb|AAG50765.1|AC079131_10 copia-type
            polyprotein, putative [Arabidopsis thaliana]
          Length = 1320

 Score =  115 bits (287), Expect = 8e-24
 Identities = 58/156 (37%), Positives = 88/156 (56%), Gaps = 1/156 (0%)
 Frame = -2

Query: 500  ITAFHVNDIFLTGQNSKKIWSFKRDLEERF*VTDLGNAKYYLGIQICKRGESLILHQGAY 321
            I   +V+D+  TG N      FK+++ + F +TD+G   YYLGI++ +    + + Q  Y
Sbjct: 995  IACLYVDDLIFTGNNPSMFEEFKKEMTKEFEMTDIGLMSYYLGIEVKQEDNGIFITQEGY 1054

Query: 320  IXXXXXXXXXXXXXXXKNPLDPGVNLFKDSDNKA-NPETYRSLMGSLLYLTYTRPDIHFA 144
                              P++ G+ L K  + +  +P T++SL+GSL YLT TRPDI +A
Sbjct: 1055 AKEVLKKFKMDDSNPVCTPMECGIKLSKKEEGEGVDPTTFKSLVGSLRYLTCTRPDILYA 1114

Query: 143  VCYLSRFMQSPTEIQLKAARNILRYVKETINLGLPY 36
            V  +SR+M+ PT    KAA+ ILRY+K T+N GL Y
Sbjct: 1115 VGVVSRYMEHPTTTHFKAAKRILRYIKGTVNFGLHY 1150


>emb|CAN74029.1| hypothetical protein VITISV_013540 [Vitis vinifera]
          Length = 894

 Score =  115 bits (287), Expect = 8e-24
 Identities = 64/158 (40%), Positives = 91/158 (57%), Gaps = 1/158 (0%)
 Frame = -2

Query: 500  ITAFHVNDIFLTGQNSKKIWSFKRDLEERF*VTDLGNAKYYLGIQICKRGESLILHQGAY 321
            I + +V+D+ +TG   K I SFK ++ + F +TDLG  KY+LG+++ +    + + Q  Y
Sbjct: 559  IISLYVDDMLVTGNQPKLIQSFKDEMNKVFEMTDLGAMKYFLGMEVMQSCSRIFICQQKY 618

Query: 320  IXXXXXXXXXXXXXXXKNPLDPGVNLFKDSDN-KANPETYRSLMGSLLYLTYTRPDIHFA 144
                              P+     L KD  + K N   YRSL+GSLLYLT +RPDI FA
Sbjct: 619  AMDMLKKFKMQDYKPVSTPMTTNEKLSKDDGSEKINEGLYRSLIGSLLYLTASRPDILFA 678

Query: 143  VCYLSRFMQSPTEIQLKAARNILRYVKETINLGLPYDK 30
            V  LSRFM SP+E    AA+ +LRY+K TI+LG+ + K
Sbjct: 679  VSVLSRFMHSPSEKHFSAAKRVLRYIKGTIDLGVQFSK 716


>gb|EXB44219.1| ABC transporter C family member 9 [Morus notabilis]
          Length = 2077

 Score =  114 bits (286), Expect = 1e-23
 Identities = 63/162 (38%), Positives = 91/162 (56%), Gaps = 1/162 (0%)
 Frame = -2

Query: 512  DRPFITAFHVNDIFLTGQNSKKIWSFKRDLEERF*VTDLGNAKYYLGIQICKRGESLILH 333
            D   I + +V+D+ +TG N   +  FK++++  F +TDLG   Y+LG++I +  + + + 
Sbjct: 1112 DDLLIISLYVDDLLITGSNITLVQKFKKEMQNVFEMTDLGEMSYFLGMKILQTEQGIFIS 1171

Query: 332  QGAYIXXXXXXXXXXXXXXXKNPLDPGVNLFK-DSDNKANPETYRSLMGSLLYLTYTRPD 156
            Q  Y                  PL     L K D  +K +   YRSL+G LLYLT TRPD
Sbjct: 1172 QEKYAKDVLKKFGMENCKDVSTPLGLNEKLSKEDGSDKIDAGIYRSLIGCLLYLTATRPD 1231

Query: 155  IHFAVCYLSRFMQSPTEIQLKAARNILRYVKETINLGLPYDK 30
            I FA   LSRFMQ+P+EI  KAA+ +LRYVK T + G+ + K
Sbjct: 1232 IMFATSLLSRFMQAPSEIHFKAAKRVLRYVKGTTDFGVWFKK 1273


>gb|AAF16534.1|AC013482_8 T26F17.17 [Arabidopsis thaliana]
          Length = 1291

 Score =  114 bits (286), Expect = 1e-23
 Identities = 58/156 (37%), Positives = 88/156 (56%), Gaps = 1/156 (0%)
 Frame = -2

Query: 500  ITAFHVNDIFLTGQNSKKIWSFKRDLEERF*VTDLGNAKYYLGIQICKRGESLILHQGAY 321
            I   +V+D+  TG N      FK+++ + F +TD+G   YYLGI++ +    + + Q  Y
Sbjct: 966  IACLYVDDLIFTGNNPSMFEEFKKEMTKEFEMTDIGLMSYYLGIEVKQEDNRIFITQEGY 1025

Query: 320  IXXXXXXXXXXXXXXXKNPLDPGVNLFKDSDNKA-NPETYRSLMGSLLYLTYTRPDIHFA 144
                              P++ G+ L K  + +  +P T++SL+GSL YLT TRPDI +A
Sbjct: 1026 AKEVLKKFKMDDSNPVCTPMECGIKLSKKEEGEGVDPTTFKSLVGSLRYLTCTRPDILYA 1085

Query: 143  VCYLSRFMQSPTEIQLKAARNILRYVKETINLGLPY 36
            V  +SR+M+ PT    KAA+ ILRY+K T+N GL Y
Sbjct: 1086 VGVVSRYMEHPTTTHFKAAKRILRYIKGTVNFGLHY 1121


>emb|CAB71063.1| copia-type polyprotein [Arabidopsis thaliana]
          Length = 1352

 Score =  114 bits (285), Expect = 1e-23
 Identities = 58/156 (37%), Positives = 88/156 (56%), Gaps = 1/156 (0%)
 Frame = -2

Query: 500  ITAFHVNDIFLTGQNSKKIWSFKRDLEERF*VTDLGNAKYYLGIQICKRGESLILHQGAY 321
            I   +V+D+  TG N      FK+++ + F +TD+G   YYLGI++ +    + + Q  Y
Sbjct: 1027 IACLYVDDLIFTGNNPSIFEEFKKEMTKEFEMTDIGLMSYYLGIEVKQEDNGIFITQEGY 1086

Query: 320  IXXXXXXXXXXXXXXXKNPLDPGVNLFKDSDNKA-NPETYRSLMGSLLYLTYTRPDIHFA 144
                              P++ G+ L K  + +  +P T++SL+GSL YLT TRPDI +A
Sbjct: 1087 AKEVLKKFKIDDSNPVCTPMECGIKLSKKEEGEGVDPTTFKSLVGSLRYLTCTRPDILYA 1146

Query: 143  VCYLSRFMQSPTEIQLKAARNILRYVKETINLGLPY 36
            V  +SR+M+ PT    KAA+ ILRY+K T+N GL Y
Sbjct: 1147 VGVVSRYMEHPTTTHFKAAKRILRYIKGTVNFGLHY 1182


>gb|AAD50001.1|AC007259_14 Hypothetical protein [Arabidopsis thaliana]
          Length = 1352

 Score =  114 bits (285), Expect = 1e-23
 Identities = 58/156 (37%), Positives = 88/156 (56%), Gaps = 1/156 (0%)
 Frame = -2

Query: 500  ITAFHVNDIFLTGQNSKKIWSFKRDLEERF*VTDLGNAKYYLGIQICKRGESLILHQGAY 321
            I   +V+D+  TG N      FK+++ + F +TD+G   YYLGI++ +    + + Q  Y
Sbjct: 1027 IACLYVDDLIFTGNNPSIFEEFKKEMTKEFEMTDIGLMSYYLGIEVKQEDNGIFITQEGY 1086

Query: 320  IXXXXXXXXXXXXXXXKNPLDPGVNLFKDSDNKA-NPETYRSLMGSLLYLTYTRPDIHFA 144
                              P++ G+ L K  + +  +P T++SL+GSL YLT TRPDI +A
Sbjct: 1087 AKEVLKKFKMDDSNPVCTPMECGIKLSKKEEGEGVDPTTFKSLVGSLRYLTCTRPDILYA 1146

Query: 143  VCYLSRFMQSPTEIQLKAARNILRYVKETINLGLPY 36
            V  +SR+M+ PT    KAA+ ILRY+K T+N GL Y
Sbjct: 1147 VGVVSRYMEHPTTTHFKAAKRILRYIKGTVNFGLHY 1182


>emb|CAD41731.1| OSJNBb0034I13.10 [Oryza sativa Japonica Group]
          Length = 1425

 Score =  113 bits (282), Expect = 3e-23
 Identities = 58/162 (35%), Positives = 93/162 (57%), Gaps = 1/162 (0%)
 Frame = -2

Query: 512  DRPFITAFHVNDIFLTGQNSKKIWSFKRDLEERF*VTDLGNAKYYLGIQICKRGESLILH 333
            D   I   +V+D+ +TG   K+I +FK  +++RF ++DLG   YYLG+++ ++GE + L 
Sbjct: 1099 DSKLIVGVYVDDLIITGSQKKEIDAFKLQMKQRFNMSDLGFLSYYLGMEVVQKGEGIFLS 1158

Query: 332  QGAYIXXXXXXXXXXXXXXXKNPLDPGVNLFKDSDNKA-NPETYRSLMGSLLYLTYTRPD 156
            Q AY                + P++  + L K+   +  +P  YRS++GSL YL  TRPD
Sbjct: 1159 QSAYAGKILEKTGMEGCNPTQVPMEARLKLSKEGTGECVDPTEYRSIVGSLRYLVNTRPD 1218

Query: 155  IHFAVCYLSRFMQSPTEIQLKAARNILRYVKETINLGLPYDK 30
            + ++V Y+SRFM+ PT     A ++ILRY+  TI  G  Y +
Sbjct: 1219 LAYSVGYVSRFMEKPTSEHWAAVKHILRYISGTIKTGCWYGR 1260


>gb|AAS90682.1| pupative polyprotein [Oryza sativa Japonica Group]
          Length = 1404

 Score =  112 bits (281), Expect = 4e-23
 Identities = 59/159 (37%), Positives = 91/159 (57%), Gaps = 1/159 (0%)
 Frame = -2

Query: 509  RPFITAFHVNDIFLTGQNSKKIWSFKRDLEERF*VTDLGNAKYYLGIQICKRGESLILHQ 330
            R  +   +V+D+ +TG N  ++  FK+++ E F ++DLG  +YYLG+++ +  E + L Q
Sbjct: 1077 RRLVVGVYVDDLVITGGNHSELDQFKKEMRETFQMSDLGLLRYYLGLEVSQTDEGITLSQ 1136

Query: 329  GAYIXXXXXXXXXXXXXXXKNPLDPGVNLFKDSDNKANPET-YRSLMGSLLYLTYTRPDI 153
            GAY                + P++P + L K S +     T YR ++GSL YL  +RPD+
Sbjct: 1137 GAYAKKILEAAGMVGCNPSQTPMEPRLKLSKLSTSPCVDATDYRKIVGSLRYLVNSRPDL 1196

Query: 152  HFAVCYLSRFMQSPTEIQLKAARNILRYVKETINLGLPY 36
             F+V Y+SRFM+ PT   L A + +LRYV  TIN G  Y
Sbjct: 1197 AFSVGYVSRFMEKPTTEHLAAVKRVLRYVAGTINRGCSY 1235


>ref|NP_001174195.1| Os05g0126900 [Oryza sativa Japonica Group]
           gi|255675982|dbj|BAH92923.1| Os05g0126900 [Oryza sativa
           Japonica Group]
          Length = 742

 Score =  112 bits (281), Expect = 4e-23
 Identities = 59/159 (37%), Positives = 91/159 (57%), Gaps = 1/159 (0%)
 Frame = -2

Query: 509 RPFITAFHVNDIFLTGQNSKKIWSFKRDLEERF*VTDLGNAKYYLGIQICKRGESLILHQ 330
           R  +   +V+D+ +TG N  ++  FK+++ E F ++DLG  +YYLG+++ +  E + L Q
Sbjct: 415 RRLVVGVYVDDLVITGGNHSELDQFKKEMRETFQMSDLGLLRYYLGLEVSQTDEGITLSQ 474

Query: 329 GAYIXXXXXXXXXXXXXXXKNPLDPGVNLFKDSDNKANPET-YRSLMGSLLYLTYTRPDI 153
           GAY                + P++P + L K S +     T YR ++GSL YL  +RPD+
Sbjct: 475 GAYAKKILEAAGMVGCNPSQTPMEPRLKLSKLSTSPCVDATDYRKIVGSLRYLVNSRPDL 534

Query: 152 HFAVCYLSRFMQSPTEIQLKAARNILRYVKETINLGLPY 36
            F+V Y+SRFM+ PT   L A + +LRYV  TIN G  Y
Sbjct: 535 AFSVGYVSRFMEKPTTEHLAAVKRVLRYVAGTINRGCSY 573


>emb|CAN76698.1| hypothetical protein VITISV_011792 [Vitis vinifera]
          Length = 1084

 Score =  112 bits (280), Expect = 5e-23
 Identities = 56/151 (37%), Positives = 87/151 (57%), Gaps = 1/151 (0%)
 Frame = -2

Query: 500  ITAFHVNDIFLTGQNSKKIWSFKRDLEERF*VTDLGNAKYYLGIQICKRGESLILHQGAY 321
            I + +V+D+  TG +      FK  ++  F +TDLG  KY+LG+++ +  E + + Q  Y
Sbjct: 789  IVSLYVDDLIFTGNDESMFVKFKNSMKLEFDMTDLGKMKYFLGVEVLQNSEGIYISQRKY 848

Query: 320  IXXXXXXXXXXXXXXXKNPLDPGVNLFKDSDN-KANPETYRSLMGSLLYLTYTRPDIHFA 144
                            KNP+ PG  L K+    K +   Y+ L+GSL+YLT TRPD+ + 
Sbjct: 849  AKEVLERFGMEKSNSVKNPIVPGDRLTKNEGGVKVDATKYKQLVGSLMYLTTTRPDLMYV 908

Query: 143  VCYLSRFMQSPTEIQLKAARNILRYVKETIN 51
            VC +SRFM SPTE+ L+AA+ +LRY+K  ++
Sbjct: 909  VCLISRFMASPTEMHLQAAKRVLRYLKGDVD 939


>dbj|BAB11200.1| copia-type polyprotein [Arabidopsis thaliana]
            gi|13872710|emb|CAC37622.1| polyprotein [Arabidopsis
            thaliana]
          Length = 1334

 Score =  110 bits (276), Expect = 2e-22
 Identities = 58/158 (36%), Positives = 92/158 (58%), Gaps = 1/158 (0%)
 Frame = -2

Query: 500  ITAFHVNDIFLTGQNSKKIWSFKRDLEERF*VTDLGNAKYYLGIQICKRGESLILHQGAY 321
            + + +V+D+  TG + + I  FK  + E F +TDLG  KY+LG+++ +    + ++Q  Y
Sbjct: 1015 VVSVYVDDLIYTGSSMEMIEGFKNSMMEEFAMTDLGKMKYFLGVEVIQDERGIFINQRKY 1074

Query: 320  IXXXXXXXXXXXXXXXKNPLDPGVNLFKDSDNKA-NPETYRSLMGSLLYLTYTRPDIHFA 144
                            KNP+ PG  L K     A +P  ++ L+GSL YLT TRPD+ F+
Sbjct: 1075 AAEIIKKYGMEGCNSVKNPIVPGQKLTKAGAGDAVDPTEFKQLIGSLRYLTTTRPDLIFS 1134

Query: 143  VCYLSRFMQSPTEIQLKAARNILRYVKETINLGLPYDK 30
            V  +SR+M+SP E  L A + ILRYV+ T++LG+ Y++
Sbjct: 1135 VNLVSRYMESPNEQHLLAVKRILRYVQGTLDLGIQYER 1172


>gb|AAF79483.1|AC022492_27 F1L3.20 [Arabidopsis thaliana]
          Length = 1188

 Score =  110 bits (276), Expect = 2e-22
 Identities = 57/160 (35%), Positives = 93/160 (58%), Gaps = 1/160 (0%)
 Frame = -2

Query: 500  ITAFHVNDIFLTGQNSKKIWSFKRDLEERF*VTDLGNAKYYLGIQICKRGESLILHQGAY 321
            I A +V+D+F+TG + + I  FK+++  +F ++DLG   YYLGI++ +  + + L+Q  Y
Sbjct: 873  IVAVYVDDLFVTGTSLELILKFKKEMSSKFEMSDLGLLSYYLGIEVIQHSKGITLNQSRY 932

Query: 320  IXXXXXXXXXXXXXXXKNPLDPGVNLFK-DSDNKANPETYRSLMGSLLYLTYTRPDIHFA 144
                              P+DP     K +++ + +   YR  +G L YL +TRPD+ ++
Sbjct: 933  AIKILEETGMKDCNLVHTPMDPSYKPSKVETEKEVDATVYRRNIGCLRYLLHTRPDLSYS 992

Query: 143  VCYLSRFMQSPTEIQLKAARNILRYVKETINLGLPYDKLD 24
            V  LSR+MQSP E    A ++ LRY+K TI+LGL Y++ D
Sbjct: 993  VGVLSRYMQSPRESHAAAMKHCLRYLKGTISLGLLYNRCD 1032


>gb|AAG51247.1|AC055769_6 copia-type polyprotein, putative; 28768-32772 [Arabidopsis thaliana]
          Length = 1334

 Score =  110 bits (276), Expect = 2e-22
 Identities = 58/158 (36%), Positives = 92/158 (58%), Gaps = 1/158 (0%)
 Frame = -2

Query: 500  ITAFHVNDIFLTGQNSKKIWSFKRDLEERF*VTDLGNAKYYLGIQICKRGESLILHQGAY 321
            + + +V+D+  TG + + I  FK  + E F +TDLG  KY+LG+++ +    + ++Q  Y
Sbjct: 1015 VVSVYVDDLIYTGSSMEMIEGFKNSMMEEFAMTDLGKMKYFLGVEVIQDERGIFINQRKY 1074

Query: 320  IXXXXXXXXXXXXXXXKNPLDPGVNLFKDSDNKA-NPETYRSLMGSLLYLTYTRPDIHFA 144
                            KNP+ PG  L K     A +P  ++ L+GSL YLT TRPD+ F+
Sbjct: 1075 AAEIIKKYGMEGCNSVKNPIVPGQKLTKAGAGDAVDPTEFKQLIGSLRYLTTTRPDLIFS 1134

Query: 143  VCYLSRFMQSPTEIQLKAARNILRYVKETINLGLPYDK 30
            V  +SR+M+SP E  L A + ILRYV+ T++LG+ Y++
Sbjct: 1135 VNLVSRYMESPNEQHLLAVKRILRYVQGTLDLGIQYER 1172


>gb|AAF97299.1|AC007843_2 Similar to copia-type reverse transcriptase proteins [Arabidopsis
           thaliana]
          Length = 833

 Score =  110 bits (276), Expect = 2e-22
 Identities = 57/160 (35%), Positives = 93/160 (58%), Gaps = 1/160 (0%)
 Frame = -2

Query: 500 ITAFHVNDIFLTGQNSKKIWSFKRDLEERF*VTDLGNAKYYLGIQICKRGESLILHQGAY 321
           I A +V+D+F+TG + + I  FK+++  +F ++DLG   YYLGI++ +  + + L+Q  Y
Sbjct: 518 IVAVYVDDLFVTGTSLELILKFKKEMSSKFEMSDLGLLSYYLGIEVIQHSKGITLNQSRY 577

Query: 320 IXXXXXXXXXXXXXXXKNPLDPGVNLFK-DSDNKANPETYRSLMGSLLYLTYTRPDIHFA 144
                             P+DP     K +++ + +   YR  +G L YL +TRPD+ ++
Sbjct: 578 AIKILEETGMKDCNLVHTPMDPSYKPSKVETEKEVDATVYRRNIGCLRYLLHTRPDLSYS 637

Query: 143 VCYLSRFMQSPTEIQLKAARNILRYVKETINLGLPYDKLD 24
           V  LSR+MQSP E    A ++ LRY+K TI+LGL Y++ D
Sbjct: 638 VGVLSRYMQSPRESHAAAMKHCLRYLKGTISLGLLYNRCD 677