BLASTX nr result

ID: Ephedra25_contig00027511 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra25_contig00027511
         (830 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN60366.1| hypothetical protein VITISV_031870 [Vitis vinifera]    54   6e-07
emb|CAN79116.1| hypothetical protein VITISV_002093 [Vitis vinifera]    53   2e-06
gb|EOY04542.1| Uncharacterized protein TCM_019778 [Theobroma cacao]    54   2e-06
emb|CAN60238.1| hypothetical protein VITISV_032906 [Vitis vinifera]    52   3e-06

>emb|CAN60366.1| hypothetical protein VITISV_031870 [Vitis vinifera]
          Length = 1274

 Score = 54.3 bits (129), Expect(2) = 6e-07
 Identities = 40/138 (28%), Positives = 69/138 (50%), Gaps = 4/138 (2%)
 Frame = -1

Query: 659 VMRKVLRSLTPIFDQVCFSIENFSDVKQLTIDEVCNRLMQDEMRPKGTDRESERDRAFRS 480
           V+ KVLRSLTP FD V  +IE   D+   + DE+   L   E+R   T+ ++E ++AF +
Sbjct: 142 VVAKVLRSLTPKFDHVVAAIEESKDLSTYSFDELMGSLQSHEVRLSRTEEKNE-EKAFYT 200

Query: 479 ESDNNEVANYIAK-TKYSRSR---NDRPGNSYRRPQRRNFKKPSQHDVPSSSRENRKYFY 312
           + + ++  N   + T   R R   + R G    R   + +++ S     + ++ N + +Y
Sbjct: 201 KGETSDQKNGGREATGRGRGRGGAHGRGGRGRGRGDAQGYQRQSTE--KNRNKSNIQCYY 258

Query: 311 CKKPVHIIKGCRAHIRDE 258
           CK+  H+   C    R E
Sbjct: 259 CKRFGHVQXECWKKERQE 276



 Score = 26.2 bits (56), Expect(2) = 6e-07
 Identities = 10/19 (52%), Positives = 14/19 (73%)
 Frame = -2

Query: 142 IDMGLSHHMTGEKDLFQHM 86
           +D G S+HMTG K LF+ +
Sbjct: 308 LDSGCSNHMTGIKSLFKEL 326


>emb|CAN79116.1| hypothetical protein VITISV_002093 [Vitis vinifera]
          Length = 1109

 Score = 52.8 bits (125), Expect(2) = 2e-06
 Identities = 39/139 (28%), Positives = 66/139 (47%), Gaps = 5/139 (3%)
 Frame = -1

Query: 659 VMRKVLRSLTPIFDQVCFSIENFSDVKQLTIDEVCNRLMQDEMRPKGTDRESERDRAFRS 480
           V+ KVLRSLTP FD V  +IE   D+   + DE+   L   E R   T  ++E ++ F +
Sbjct: 128 VVAKVLRSLTPKFDHVVAAIEESKDLSTYSFDELMGSLQSHEXRLSRTXEKNE-EKTFYT 186

Query: 479 ESDNNEVANYIAKTKYSRSRNDRPGNSYRRPQRRNFKKPSQHDVPSSSRENR-----KYF 315
           + + ++  N     + +  R    G ++ R  R   +  +Q D   S+ ++R     + +
Sbjct: 187 KGETSDQKN---GGREATGRGRGRGGAHGRGGRXRGRGDAQGDQRQSTEKSRNKSNIQCY 243

Query: 314 YCKKPVHIIKGCRAHIRDE 258
           YCK+  H+   C    R E
Sbjct: 244 YCKRFGHVQAECWKKERQE 262



 Score = 26.2 bits (56), Expect(2) = 2e-06
 Identities = 10/19 (52%), Positives = 14/19 (73%)
 Frame = -2

Query: 142 IDMGLSHHMTGEKDLFQHM 86
           +D G S+HMTG K LF+ +
Sbjct: 294 LDSGCSNHMTGIKSLFKEL 312


>gb|EOY04542.1| Uncharacterized protein TCM_019778 [Theobroma cacao]
          Length = 704

 Score = 54.3 bits (129), Expect(2) = 2e-06
 Identities = 41/146 (28%), Positives = 65/146 (44%), Gaps = 2/146 (1%)
 Frame = -1

Query: 659 VMRKVLRSLTPIFDQVCFSIENFSDVKQLTIDEVCNRLMQDEMRPKGTDRESERDRAFRS 480
           V+ KVLRSLTP F+ +  +IE   D+   + DE+ + L   E R      E   ++AF+ 
Sbjct: 117 VVAKVLRSLTPKFEHIVAAIEEAHDLSNYSFDELMSSLQAHEER-LFRSHEKNEEKAFQV 175

Query: 479 ESDNNEVANYIAKTKYSRSRNDRPGNSYRRPQRRNFKKPSQHDVPSSSRENRKY--FYCK 306
             ++N        T   R R    G  + R + R           +  R+N+ +  +YCK
Sbjct: 176 NEESNLKETLENSTGGGRGRVGFRGKGHGRGRSRGRS--------NEERQNKTFQCYYCK 227

Query: 305 KPVHIIKGCRAHIRDESIKANVKNSS 228
           KP H    C    +DE+ +A+    S
Sbjct: 228 KPGHRAAYCWQKQKDENNQASFVEKS 253



 Score = 24.3 bits (51), Expect(2) = 2e-06
 Identities = 8/19 (42%), Positives = 14/19 (73%)
 Frame = -2

Query: 142 IDMGLSHHMTGEKDLFQHM 86
           +D G S+HM+G + LF+ +
Sbjct: 276 LDSGCSNHMSGTRSLFKEL 294


>emb|CAN60238.1| hypothetical protein VITISV_032906 [Vitis vinifera]
          Length = 1430

 Score = 52.0 bits (123), Expect(2) = 3e-06
 Identities = 39/139 (28%), Positives = 65/139 (46%), Gaps = 5/139 (3%)
 Frame = -1

Query: 659 VMRKVLRSLTPIFDQVCFSIENFSDVKQLTIDEVCNRLMQDEMRPKGTDRESERDRAFRS 480
           V+ KVLRSLTP FD V   IE   D+   + DE+   L   E+R   T+ ++E ++ F +
Sbjct: 269 VVAKVLRSLTPKFDHVVAXIEESKDLSTYSFDELMGSLQSHEVRLSXTEDKNE-EKXFYT 327

Query: 479 ESDNNEVANYIAKTKYSRSRNDRPGNSYRRPQRRNFKKPSQHDVPSSSRENRK-----YF 315
           + + ++  N     +    R    G ++ R  R   +  +Q D   S+ ++R       +
Sbjct: 328 KGETSDXKN---GGREXTGRGRGRGGAHGRGGRGRGRGDAQGDQRQSTEKSRNKSNIXCY 384

Query: 314 YCKKPVHIIKGCRAHIRDE 258
           YCK+  H+   C    R E
Sbjct: 385 YCKRFGHVQAECWKKERQE 403



 Score = 26.2 bits (56), Expect(2) = 3e-06
 Identities = 10/19 (52%), Positives = 14/19 (73%)
 Frame = -2

Query: 142 IDMGLSHHMTGEKDLFQHM 86
           +D G S+HMTG K LF+ +
Sbjct: 435 LDSGCSNHMTGIKSLFKEL 453


Top