BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra25_contig00027459
         (681 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EMJ25423.1| hypothetical protein PRUPE_ppa017885mg [Prunus pe...   232   9e-59
ref|XP_004300124.1| PREDICTED: pentatricopeptide repeat-containi...   220   3e-55
gb|EXB60130.1| hypothetical protein L484_013395 [Morus notabilis]     219   5e-55
ref|XP_002284592.2| PREDICTED: pentatricopeptide repeat-containi...   219   5e-55
ref|XP_006434266.1| hypothetical protein CICLE_v10000990mg [Citr...   219   6e-55
gb|EOY16398.1| Tetratricopeptide repeat (TPR)-like superfamily p...   218   1e-54
ref|XP_006472835.1| PREDICTED: pentatricopeptide repeat-containi...   218   2e-54
ref|XP_006340242.1| PREDICTED: pentatricopeptide repeat-containi...   216   7e-54
ref|XP_002307458.2| pentatricopeptide repeat-containing family p...   214   2e-53
ref|XP_006849933.1| hypothetical protein AMTR_s00022p00121040 [A...   214   2e-53
ref|XP_004251179.1| PREDICTED: pentatricopeptide repeat-containi...   213   6e-53
ref|XP_006390097.1| hypothetical protein EUTSA_v10018469mg [Eutr...   211   1e-52
gb|AAG29201.1|AC078898_11 hypothetical protein [Arabidopsis thal...   210   3e-52
ref|NP_177860.2| pentatricopeptide repeat-containing protein [Ar...   210   3e-52
ref|XP_004149431.1| PREDICTED: pentatricopeptide repeat-containi...   209   5e-52
ref|XP_002520317.1| pentatricopeptide repeat-containing protein,...   209   5e-52
gb|ESW09460.1| hypothetical protein PHAVU_009G129200g [Phaseolus...   209   8e-52
ref|XP_003526650.2| PREDICTED: pentatricopeptide repeat-containi...   207   2e-51
ref|XP_006581591.1| PREDICTED: pentatricopeptide repeat-containi...   207   2e-51
ref|XP_002280443.1| PREDICTED: pentatricopeptide repeat-containi...   207   2e-51

>gb|EMJ25423.1| hypothetical protein PRUPE_ppa017885mg [Prunus persica]
          Length = 464

 Score =  232 bits (591), Expect = 9e-59
 Identities = 112/217 (51%), Positives = 153/217 (70%)
 Frame = -3

Query: 652 IRKILSSTSTAAVSETLEGANLKISPPLVVQVLKQFQNAGLLNYYFFEWAGRQNGYSHSP 473
           I KI+ S  T A+   L+ + ++ISP +V +VL +FQNAG++ Y FFEWAG+Q  Y+HS 
Sbjct: 22  ICKIMMSCPTLALDTALDQSGIRISPEMVEEVLMRFQNAGMVAYRFFEWAGKQRNYTHSV 81

Query: 472 EAYYAMIESAGKIKKYGLMWTLLKEMHAKRILAKKPFQIIIRSYALDKRFRMAVDTLQLM 293
           +AY+AMIES  KI++Y +MW L+  M AKR+   + F II+R YA  ++   A+ T  +M
Sbjct: 82  KAYHAMIESLAKIRQYQIMWELVNSMRAKRMQNMETFSIIMRKYARAQKVEEALYTFNVM 141

Query: 292 KDFGIWPELEDFNALLSALCKSRNVRKAQTLFDDMKSVDGFKPDLKTYSILIQGWGKDPN 113
           + +   P L  FN LLSALCKS+NVRKAQ +FD MK  D F+PD KTYSILI GWGKDPN
Sbjct: 142 EKYDCAPNLAAFNGLLSALCKSKNVRKAQEIFDKMK--DRFEPDSKTYSILIDGWGKDPN 199

Query: 112 LTMVKELFQQMLDCGCEPDAVVYGILINSLCKGGKME 2
           L   +E+F++M D GC PD V YGI+++ LCK G+++
Sbjct: 200 LPKAREVFREMTDAGCNPDIVTYGIMVDVLCKAGRVD 236



 Score = 60.5 bits (145), Expect = 5e-07
 Identities = 33/121 (27%), Positives = 63/121 (52%)
 Frame = -3

Query: 364 FQIIIRSYALDKRFRMAVDTLQLMKDFGIWPELEDFNALLSALCKSRNVRKAQTLFDDMK 185
           + +++ +Y ++ R   AVD    M+  GI  ++  +NAL+ A CK+   +    + +DM 
Sbjct: 257 YSVLVHTYGVEHRIEDAVDAFLEMERNGIKADVVVYNALIGAFCKANKFKNVYRVLNDMD 316

Query: 184 SVDGFKPDLKTYSILIQGWGKDPNLTMVKELFQQMLDCGCEPDAVVYGILINSLCKGGKM 5
           S  G KP+ +T +I++              +F++M+   CEPDA  Y ++I   C+  ++
Sbjct: 317 S-KGVKPNSRTCNIILNSLIDRGETDEAFSVFRKMIKL-CEPDADTYTMMIKMFCEKDEL 374

Query: 4   E 2
           E
Sbjct: 375 E 375


>ref|XP_004300124.1| PREDICTED: pentatricopeptide repeat-containing protein At1g77360,
           mitochondrial-like [Fragaria vesca subsp. vesca]
          Length = 484

 Score =  220 bits (561), Expect = 3e-55
 Identities = 106/218 (48%), Positives = 152/218 (69%)
 Frame = -3

Query: 655 KIRKILSSTSTAAVSETLEGANLKISPPLVVQVLKQFQNAGLLNYYFFEWAGRQNGYSHS 476
           +I KI+ S  T A+   L+ + ++ISP +V  VL +F+NAG++ Y FFEWAG+Q  Y+HS
Sbjct: 41  RICKIMMSCPTLALDTALDQSGVRISPEIVEDVLVRFKNAGMVAYRFFEWAGKQRNYTHS 100

Query: 475 PEAYYAMIESAGKIKKYGLMWTLLKEMHAKRILAKKPFQIIIRSYALDKRFRMAVDTLQL 296
            +AY+AMI+S  KI++Y +MW L+  M  +R+   + F II+R YA  ++   A+ T  +
Sbjct: 101 VKAYHAMIDSLAKIRQYQIMWELVNSMRTQRMQNMETFSIIMRKYARAQKVEEALYTFNV 160

Query: 295 MKDFGIWPELEDFNALLSALCKSRNVRKAQTLFDDMKSVDGFKPDLKTYSILIQGWGKDP 116
           M+ +   P L  FN LLSALCKS+NVRKAQ +FD MK  D F PD KT+SILI GWGKDP
Sbjct: 161 MEKYDCAPNLAAFNDLLSALCKSKNVRKAQEIFDKMK--DRFVPDSKTFSILIDGWGKDP 218

Query: 115 NLTMVKELFQQMLDCGCEPDAVVYGILINSLCKGGKME 2
           NL   +E++++M+D GC PD V YGI+++ LCK G+++
Sbjct: 219 NLPKAREVYREMVDAGCIPDIVTYGIMVDVLCKAGRVD 256


>gb|EXB60130.1| hypothetical protein L484_013395 [Morus notabilis]
          Length = 478

 Score =  219 bits (559), Expect = 5e-55
 Identities = 109/220 (49%), Positives = 151/220 (68%)
 Frame = -3

Query: 661 LNKIRKILSSTSTAAVSETLEGANLKISPPLVVQVLKQFQNAGLLNYYFFEWAGRQNGYS 482
           +  I KI+SST  AA+   L+ A ++++P +   VL +FQNAGLL + FF+WA +Q GYS
Sbjct: 33  IQTICKIMSSTPVAALDTALDHAGVRLTPEIAEHVLARFQNAGLLAHRFFQWAAKQRGYS 92

Query: 481 HSPEAYYAMIESAGKIKKYGLMWTLLKEMHAKRILAKKPFQIIIRSYALDKRFRMAVDTL 302
           HS  A++A IES  KI++Y LMW L+  M +   L  + F II+R YA  ++   A+ T 
Sbjct: 93  HSVRAHHAAIESLAKIRQYQLMWELVSAMRSNDTLNVETFCIIMRKYARARKIDEALYTF 152

Query: 301 QLMKDFGIWPELEDFNALLSALCKSRNVRKAQTLFDDMKSVDGFKPDLKTYSILIQGWGK 122
            +M+  G+   L  FN LLSALCKSRNVRKAQ +FD MK  D F+PD KTYSILI GWGK
Sbjct: 153 NVMEKHGVSQNLAAFNGLLSALCKSRNVRKAQEIFDKMK--DRFEPDSKTYSILIDGWGK 210

Query: 121 DPNLTMVKELFQQMLDCGCEPDAVVYGILINSLCKGGKME 2
           +PNL   +E+F++M+D G +PD V YGI+++ LCK G+++
Sbjct: 211 EPNLPRAREVFREMVDLGIKPDVVTYGIMVDVLCKAGRVD 250



 Score = 58.5 bits (140), Expect = 2e-06
 Identities = 51/246 (20%), Positives = 114/246 (46%), Gaps = 20/246 (8%)
 Frame = -3

Query: 679 DICVYSLNKIRKILSSTSTAA----VSETLEGANLKISPPLVVQVLKQFQNAGLLNYYFF 512
           D  +Y+ N + K   S + AA    +S   +  N++ +  +  ++  +F+          
Sbjct: 146 DEALYTFNVMEKHGVSQNLAAFNGLLSALCKSRNVRKAQEIFDKMKDRFEPDSKTYSILI 205

Query: 511 EWAGRQNGYSHSPEAYYAMIESAGK--IKKYGLMWTLL-------KEMHAKRILAK---K 368
           +  G++     + E +  M++   K  +  YG+M  +L       + + + R +     K
Sbjct: 206 DGWGKEPNLPRAREVFREMVDLGIKPDVVTYGIMVDVLCKAGRVDEAIESVRHMDSNGCK 265

Query: 367 P----FQIIIRSYALDKRFRMAVDTLQLMKDFGIWPELEDFNALLSALCKSRNVRKAQTL 200
           P    + +++ +Y ++ R   AVD    M+  G+  ++  +NAL+ A  +    + A+ +
Sbjct: 266 PTSFIYSVLVHTYGVESRIEDAVDAFMEMERRGVEADVVVYNALIGAFARVDRFKNAKRV 325

Query: 199 FDDMKSVDGFKPDLKTYSILIQGWGKDPNLTMVKELFQQMLDCGCEPDAVVYGILINSLC 20
            +DM S  G +P+ +T ++++ G           ++F++M    CEPDA  Y ++I   C
Sbjct: 326 LNDMNS-KGVRPNSRTCNVMLNGLIGRGRTEEAVKVFRRMSKV-CEPDADTYTMMIKMFC 383

Query: 19  KGGKME 2
           + G+++
Sbjct: 384 EKGEVD 389


>ref|XP_002284592.2| PREDICTED: pentatricopeptide repeat-containing protein At1g77360,
           mitochondrial-like [Vitis vinifera]
          Length = 476

 Score =  219 bits (559), Expect = 5e-55
 Identities = 105/218 (48%), Positives = 154/218 (70%)
 Frame = -3

Query: 655 KIRKILSSTSTAAVSETLEGANLKISPPLVVQVLKQFQNAGLLNYYFFEWAGRQNGYSHS 476
           +I KI+ S     +  +L  + +++SP +V  VLK+F+NAG+L Y FFEWAG+Q  Y+HS
Sbjct: 17  RICKIMISCPKLELDTSLSESGIRVSPIVVENVLKRFENAGMLAYQFFEWAGKQRNYTHS 76

Query: 475 PEAYYAMIESAGKIKKYGLMWTLLKEMHAKRILAKKPFQIIIRSYALDKRFRMAVDTLQL 296
             AY+ MIES  KI++Y +MW L+ +M + +IL  + F II+R YA  ++ + AV T  +
Sbjct: 77  IRAYHTMIESLAKIRQYQIMWDLVNKMRSLKILNVETFCIIMRKYARSQKVKEAVYTFNI 136

Query: 295 MKDFGIWPELEDFNALLSALCKSRNVRKAQTLFDDMKSVDGFKPDLKTYSILIQGWGKDP 116
           M+ + + P L  FN+LLSALCKS+NV KAQ +F+ MK  D F PD KTYSIL++GWGK P
Sbjct: 137 MEKYDVPPNLAAFNSLLSALCKSKNVVKAQEIFNGMK--DQFIPDSKTYSILLEGWGKAP 194

Query: 115 NLTMVKELFQQMLDCGCEPDAVVYGILINSLCKGGKME 2
           NL   +E+F++M+D GC+PD V YGI+++ LCK G+++
Sbjct: 195 NLPKAREIFREMVDMGCDPDIVTYGIMVDILCKAGRVD 232


>ref|XP_006434266.1| hypothetical protein CICLE_v10000990mg [Citrus clementina]
           gi|567883417|ref|XP_006434267.1| hypothetical protein
           CICLE_v10000990mg [Citrus clementina]
           gi|567883419|ref|XP_006434268.1| hypothetical protein
           CICLE_v10000990mg [Citrus clementina]
           gi|567883421|ref|XP_006434269.1| hypothetical protein
           CICLE_v10000990mg [Citrus clementina]
           gi|567883423|ref|XP_006434270.1| hypothetical protein
           CICLE_v10000990mg [Citrus clementina]
           gi|557536388|gb|ESR47506.1| hypothetical protein
           CICLE_v10000990mg [Citrus clementina]
           gi|557536389|gb|ESR47507.1| hypothetical protein
           CICLE_v10000990mg [Citrus clementina]
           gi|557536390|gb|ESR47508.1| hypothetical protein
           CICLE_v10000990mg [Citrus clementina]
           gi|557536391|gb|ESR47509.1| hypothetical protein
           CICLE_v10000990mg [Citrus clementina]
           gi|557536392|gb|ESR47510.1| hypothetical protein
           CICLE_v10000990mg [Citrus clementina]
          Length = 480

 Score =  219 bits (558), Expect = 6e-55
 Identities = 105/217 (48%), Positives = 150/217 (69%)
 Frame = -3

Query: 652 IRKILSSTSTAAVSETLEGANLKISPPLVVQVLKQFQNAGLLNYYFFEWAGRQNGYSHSP 473
           I KI+ S+    +   L+ + +++SP +V  VL++F+NAG L + FF+WA +Q  Y HS 
Sbjct: 38  ISKIMLSSPKVVLDTALDQSGIRVSPEIVEDVLEKFKNAGTLAFCFFKWAEKQQNYEHSV 97

Query: 472 EAYYAMIESAGKIKKYGLMWTLLKEMHAKRILAKKPFQIIIRSYALDKRFRMAVDTLQLM 293
            AY++MIES  KI++Y +MW L+  M  KR+L  + F II+R YA  ++   AV T  +M
Sbjct: 98  RAYHSMIESLAKIRQYQIMWDLVNAMRTKRMLNVETFCIIMRKYARVQKVEEAVYTFNVM 157

Query: 292 KDFGIWPELEDFNALLSALCKSRNVRKAQTLFDDMKSVDGFKPDLKTYSILIQGWGKDPN 113
           + +G+   L  FN LLSALCKS+NVRKAQ +FD MK  D F PD KTYSIL++GWGKDPN
Sbjct: 158 QKYGVTQNLAAFNGLLSALCKSKNVRKAQEIFDCMK--DRFIPDSKTYSILLEGWGKDPN 215

Query: 112 LTMVKELFQQMLDCGCEPDAVVYGILINSLCKGGKME 2
           L   +E+F++M+D GC PD V YGI+++ LCK G+++
Sbjct: 216 LPRAREIFREMVDTGCNPDIVTYGIMVDVLCKAGRVD 252



 Score = 66.2 bits (160), Expect = 9e-09
 Identities = 35/121 (28%), Positives = 64/121 (52%)
 Frame = -3

Query: 364 FQIIIRSYALDKRFRMAVDTLQLMKDFGIWPELEDFNALLSALCKSRNVRKAQTLFDDMK 185
           + +++ +Y ++ R   AVDT   M+  GI  ++  +NAL+ A CK+   +    +  DM 
Sbjct: 273 YSVLVHTYGVENRIEDAVDTFLEMEKNGIQADVAMYNALIGAFCKANKFKNVYRVLKDMN 332

Query: 184 SVDGFKPDLKTYSILIQGWGKDPNLTMVKELFQQMLDCGCEPDAVVYGILINSLCKGGKM 5
           S  G  P+ +T +I++ G            +F++M+   CE DA  Y ++I   C+GG++
Sbjct: 333 S-KGVAPNSRTCNIILNGLIGRGETDEAYRVFRRMIKL-CEADADTYTMMIKMFCQGGEL 390

Query: 4   E 2
           E
Sbjct: 391 E 391


>gb|EOY16398.1| Tetratricopeptide repeat (TPR)-like superfamily protein isoform 1
           [Theobroma cacao] gi|508724502|gb|EOY16399.1|
           Tetratricopeptide repeat (TPR)-like superfamily protein
           isoform 1 [Theobroma cacao] gi|508724503|gb|EOY16400.1|
           Tetratricopeptide repeat (TPR)-like superfamily protein
           isoform 1 [Theobroma cacao] gi|508724504|gb|EOY16401.1|
           Tetratricopeptide repeat (TPR)-like superfamily protein
           isoform 1 [Theobroma cacao] gi|508724505|gb|EOY16402.1|
           Tetratricopeptide repeat (TPR)-like superfamily protein
           isoform 1 [Theobroma cacao]
          Length = 480

 Score =  218 bits (556), Expect = 1e-54
 Identities = 105/218 (48%), Positives = 150/218 (68%)
 Frame = -3

Query: 655 KIRKILSSTSTAAVSETLEGANLKISPPLVVQVLKQFQNAGLLNYYFFEWAGRQNGYSHS 476
           KI KI+ S+S   ++  L+ + L++ P +V  VLK+F+NAG+L Y FFEWA +Q  Y HS
Sbjct: 37  KICKIMMSSSPVVLNTALDQSGLRVPPEVVEDVLKRFENAGMLAYRFFEWAEKQRNYMHS 96

Query: 475 PEAYYAMIESAGKIKKYGLMWTLLKEMHAKRILAKKPFQIIIRSYALDKRFRMAVDTLQL 296
             AY+ MIES  KI++Y +MW L+ +M  K +L  + F II+R YA  ++    V T  +
Sbjct: 97  IRAYHTMIESLAKIRQYQIMWDLVNKMRNKSMLNVETFCIIMRRYARVQKVEETVYTFNI 156

Query: 295 MKDFGIWPELEDFNALLSALCKSRNVRKAQTLFDDMKSVDGFKPDLKTYSILIQGWGKDP 116
           M+ + + P L  FN LLS LCKS+NVRKAQ +FD MK  D F PD KTYSIL++GWG+ P
Sbjct: 157 MEKYDVPPNLAAFNGLLSTLCKSKNVRKAQEIFDKMK--DRFVPDSKTYSILLEGWGRAP 214

Query: 115 NLTMVKELFQQMLDCGCEPDAVVYGILINSLCKGGKME 2
           NL   +E+F++M+D GC+PD V YGI+++ LCK G+++
Sbjct: 215 NLPKAREIFREMVDMGCDPDIVTYGIMVDILCKSGRVD 252



 Score = 56.2 bits (134), Expect = 9e-06
 Identities = 31/121 (25%), Positives = 62/121 (51%)
 Frame = -3

Query: 364 FQIIIRSYALDKRFRMAVDTLQLMKDFGIWPELEDFNALLSALCKSRNVRKAQTLFDDMK 185
           + +++ +Y ++ R   AVD    M+  GI  ++  +NAL+ A CK   ++    + ++M 
Sbjct: 273 YSVLVHTYGIENRIEDAVDAFLEMERNGIKADVVVYNALIGAFCKVNKLKNVYRVLNEMD 332

Query: 184 SVDGFKPDLKTYSILIQGWGKDPNLTMVKELFQQMLDCGCEPDAVVYGILINSLCKGGKM 5
           S  G  P+ +T +I++             ++F++M+   CEPDA  Y I+I   C   ++
Sbjct: 333 S-KGVAPNARTCNIILNSLIGRGETDEAFKVFRRMIK-ECEPDADTYTIMIKMFCDRDEL 390

Query: 4   E 2
           +
Sbjct: 391 D 391


>ref|XP_006472835.1| PREDICTED: pentatricopeptide repeat-containing protein At1g77360,
           mitochondrial-like isoform X1 [Citrus sinensis]
           gi|568837650|ref|XP_006472836.1| PREDICTED:
           pentatricopeptide repeat-containing protein At1g77360,
           mitochondrial-like isoform X2 [Citrus sinensis]
           gi|568837652|ref|XP_006472837.1| PREDICTED:
           pentatricopeptide repeat-containing protein At1g77360,
           mitochondrial-like isoform X3 [Citrus sinensis]
           gi|568837654|ref|XP_006472838.1| PREDICTED:
           pentatricopeptide repeat-containing protein At1g77360,
           mitochondrial-like isoform X4 [Citrus sinensis]
          Length = 480

 Score =  218 bits (554), Expect = 2e-54
 Identities = 104/217 (47%), Positives = 149/217 (68%)
 Frame = -3

Query: 652 IRKILSSTSTAAVSETLEGANLKISPPLVVQVLKQFQNAGLLNYYFFEWAGRQNGYSHSP 473
           I KI+ S+    +   L+ + +++SP +V  VL++F+NAG L + FF+W  +Q  Y HS 
Sbjct: 38  ISKIMLSSPKVVLDTALDQSGIRVSPEIVEDVLEKFKNAGTLAFCFFKWTEKQQNYEHSV 97

Query: 472 EAYYAMIESAGKIKKYGLMWTLLKEMHAKRILAKKPFQIIIRSYALDKRFRMAVDTLQLM 293
            AY++MIES  KI++Y +MW L+  M  KR+L  + F II+R YA  ++   AV T  +M
Sbjct: 98  RAYHSMIESLAKIRQYQIMWDLVNAMRTKRMLNVETFCIIMRKYARVQKVEEAVYTFNVM 157

Query: 292 KDFGIWPELEDFNALLSALCKSRNVRKAQTLFDDMKSVDGFKPDLKTYSILIQGWGKDPN 113
           + +G+   L  FN LLSALCKS+NVRKAQ +FD MK  D F PD KTYSIL++GWGKDPN
Sbjct: 158 QKYGVTQNLAAFNGLLSALCKSKNVRKAQEIFDCMK--DRFIPDSKTYSILLEGWGKDPN 215

Query: 112 LTMVKELFQQMLDCGCEPDAVVYGILINSLCKGGKME 2
           L   +E+F++M+D GC PD V YGI+++ LCK G+++
Sbjct: 216 LPRAREIFREMVDTGCNPDIVTYGIMVDVLCKAGRVD 252



 Score = 66.2 bits (160), Expect = 9e-09
 Identities = 35/121 (28%), Positives = 64/121 (52%)
 Frame = -3

Query: 364 FQIIIRSYALDKRFRMAVDTLQLMKDFGIWPELEDFNALLSALCKSRNVRKAQTLFDDMK 185
           + +++ +Y ++ R   AVDT   M+  GI  ++  +NAL+ A CK+   +    +  DM 
Sbjct: 273 YSVLVHTYGVENRIEDAVDTFLEMEKNGILADVAMYNALIGAFCKANKFKNVYRVLKDMN 332

Query: 184 SVDGFKPDLKTYSILIQGWGKDPNLTMVKELFQQMLDCGCEPDAVVYGILINSLCKGGKM 5
           S  G  P+ +T +I++ G            +F++M+   CE DA  Y ++I   C+GG++
Sbjct: 333 S-KGVAPNSRTCNIILNGLIGRGETDEAYRVFRRMIKL-CEADADTYTMMIKMFCQGGEL 390

Query: 4   E 2
           E
Sbjct: 391 E 391


>ref|XP_006340242.1| PREDICTED: pentatricopeptide repeat-containing protein At1g77360,
           mitochondrial-like [Solanum tuberosum]
          Length = 478

 Score =  216 bits (549), Expect = 7e-54
 Identities = 102/220 (46%), Positives = 149/220 (67%)
 Frame = -3

Query: 661 LNKIRKILSSTSTAAVSETLEGANLKISPPLVVQVLKQFQNAGLLNYYFFEWAGRQNGYS 482
           L ++ KI+ S   A +   L+ + +++ P +V  VLK+F+NAG+L Y FFEWAG+Q+ Y 
Sbjct: 33  LTRLCKIMMSCPKAGLDTELDQSGIRVLPEMVEDVLKRFENAGMLAYRFFEWAGKQHNYE 92

Query: 481 HSPEAYYAMIESAGKIKKYGLMWTLLKEMHAKRILAKKPFQIIIRSYALDKRFRMAVDTL 302
           HS  AY++MI S  KI++Y +MW L+ EM  KR+L  + F II+R YA  ++    + T 
Sbjct: 93  HSTRAYHSMIGSLAKIRQYQMMWDLVNEMKTKRMLNIETFCIIMRKYARAQKVEETLYTF 152

Query: 301 QLMKDFGIWPELEDFNALLSALCKSRNVRKAQTLFDDMKSVDGFKPDLKTYSILIQGWGK 122
            +M  F + P L  FN LLSALCKS+NV KAQ +FD  K  + F PD KTYSILI+GWG+
Sbjct: 153 HIMNKFDVPPNLAAFNGLLSALCKSKNVEKAQEIFDSKK--NEFTPDSKTYSILIEGWGR 210

Query: 121 DPNLTMVKELFQQMLDCGCEPDAVVYGILINSLCKGGKME 2
            PNL   +E++++M++ GC PD V YGI+++ LCK G+++
Sbjct: 211 APNLPKAREVYREMIEAGCNPDIVTYGIMVDILCKAGRVD 250



 Score = 63.2 bits (152), Expect = 7e-08
 Identities = 47/183 (25%), Positives = 86/183 (46%), Gaps = 16/183 (8%)
 Frame = -3

Query: 502 GRQNGYSHSPEAYYAMIESAGK--IKKYGLMWTLLKEM----HAKRILAKKPFQ------ 359
           GR      + E Y  MIE+     I  YG+M  +L +      A  I+ +  F       
Sbjct: 209 GRAPNLPKAREVYREMIEAGCNPDIVTYGIMVDILCKAGRVDEAVEIVKEMDFSGCRPTS 268

Query: 358 ----IIIRSYALDKRFRMAVDTLQLMKDFGIWPELEDFNALLSALCKSRNVRKAQTLFDD 191
               +++ +Y L+ R   A+DT   M+  G+  ++  +N+L+SA CK    +    + +D
Sbjct: 269 FIYSVLVHTYGLENRIEDAIDTFLEMEKNGVEADVAVYNSLISAFCKVNKFQNVYMVLND 328

Query: 190 MKSVDGFKPDLKTYSILIQGWGKDPNLTMVKELFQQMLDCGCEPDAVVYGILINSLCKGG 11
           M+   G  P+ +T +I++ G           ++F++ML   C+PDA  Y ++I   C+  
Sbjct: 329 MQ-FKGVTPNARTCNIILSGLIARGETDDAFKVFRRMLKI-CDPDADTYTMMIKMFCEKN 386

Query: 10  KME 2
           +M+
Sbjct: 387 EMK 389


>ref|XP_002307458.2| pentatricopeptide repeat-containing family protein [Populus
           trichocarpa] gi|550339385|gb|EEE94454.2|
           pentatricopeptide repeat-containing family protein
           [Populus trichocarpa]
          Length = 478

 Score =  214 bits (545), Expect = 2e-53
 Identities = 102/217 (47%), Positives = 152/217 (70%)
 Frame = -3

Query: 652 IRKILSSTSTAAVSETLEGANLKISPPLVVQVLKQFQNAGLLNYYFFEWAGRQNGYSHSP 473
           I KI+ S+S   +   L+ + +++S  +V  VLK+F+NAG++ Y FFEWA +Q  Y+HS 
Sbjct: 35  ICKIMMSSSVVTLDTALDQSGVRVSEQIVDDVLKKFENAGMVAYRFFEWAEKQRHYNHSV 94

Query: 472 EAYYAMIESAGKIKKYGLMWTLLKEMHAKRILAKKPFQIIIRSYALDKRFRMAVDTLQLM 293
           +A++ +I+S  KI++Y LMW ++K M +KR++  + F II+R YA  ++   AV T  +M
Sbjct: 95  KAFHTVIDSLAKIRQYQLMWDVVKVMKSKRMVNVETFCIIMRKYARAQKVEEAVYTFNIM 154

Query: 292 KDFGIWPELEDFNALLSALCKSRNVRKAQTLFDDMKSVDGFKPDLKTYSILIQGWGKDPN 113
             + + P L  FN LLSALCKS+NVRKAQ +FD +K  D F PD KTYSIL++GWGKDPN
Sbjct: 155 DKYDVPPNLAAFNGLLSALCKSKNVRKAQEIFDSIK--DRFVPDSKTYSILLEGWGKDPN 212

Query: 112 LTMVKELFQQMLDCGCEPDAVVYGILINSLCKGGKME 2
           L   +E+F++M+  GC PD V YGI+++ LCK G+++
Sbjct: 213 LPKAREIFREMVSNGCRPDIVTYGIMVDVLCKAGRVD 249



 Score = 60.1 bits (144), Expect = 6e-07
 Identities = 30/121 (24%), Positives = 64/121 (52%)
 Frame = -3

Query: 364 FQIIIRSYALDKRFRMAVDTLQLMKDFGIWPELEDFNALLSALCKSRNVRKAQTLFDDMK 185
           + +++ +Y ++ R   AV T   M++ GI P++  +NAL+ A CK+  ++    + ++M 
Sbjct: 270 YSVLVHTYGIENRIEDAVSTFLEMENNGIEPDVAVYNALIGAFCKANRLKNVYRVLNEM- 328

Query: 184 SVDGFKPDLKTYSILIQGWGKDPNLTMVKELFQQMLDCGCEPDAVVYGILINSLCKGGKM 5
              G  P+ +T++I++              +F +M+   CEPDA  Y ++I   C+  ++
Sbjct: 329 DCKGVTPNSRTFNIILSSLIGRGETDEAYRVFLRMIKV-CEPDADTYTMMIKMFCERDEL 387

Query: 4   E 2
           +
Sbjct: 388 K 388


>ref|XP_006849933.1| hypothetical protein AMTR_s00022p00121040 [Amborella trichopoda]
           gi|548853531|gb|ERN11514.1| hypothetical protein
           AMTR_s00022p00121040 [Amborella trichopoda]
          Length = 438

 Score =  214 bits (545), Expect = 2e-53
 Identities = 103/205 (50%), Positives = 144/205 (70%)
 Frame = -3

Query: 616 VSETLEGANLKISPPLVVQVLKQFQNAGLLNYYFFEWAGRQNGYSHSPEAYYAMIESAGK 437
           +  TL+ + +++SP LV  +LK+F+NAG+  Y FF+W  +Q  YSHS ++Y+ MI S  K
Sbjct: 8   LEHTLDESGVRVSPDLVEDILKRFENAGMQAYRFFQWVDKQINYSHSVKSYHIMIGSLAK 67

Query: 436 IKKYGLMWTLLKEMHAKRILAKKPFQIIIRSYALDKRFRMAVDTLQLMKDFGIWPELEDF 257
           I++Y LMW L+ +M  K IL  + F I+IR YA   +   AV T  +M  FG+ P L  F
Sbjct: 68  IRQYQLMWDLVNDMRRKDILNNETFCIMIRKYARAHKVDEAVYTFNVMDKFGLTPNLTAF 127

Query: 256 NALLSALCKSRNVRKAQTLFDDMKSVDGFKPDLKTYSILIQGWGKDPNLTMVKELFQQML 77
           N+LLSA CK++NVRKAQ +FDDMK  D F+P+  TYSIL++GWGK+PNL   +E+F +M+
Sbjct: 128 NSLLSAFCKAKNVRKAQEIFDDMK--DRFEPNSITYSILLEGWGKEPNLPKAREIFLEMI 185

Query: 76  DCGCEPDAVVYGILINSLCKGGKME 2
           D  CEPD V YGI+I+SLCK G++E
Sbjct: 186 DKNCEPDIVTYGIMIDSLCKAGRVE 210



 Score = 60.5 bits (145), Expect = 5e-07
 Identities = 56/248 (22%), Positives = 112/248 (45%), Gaps = 22/248 (8%)
 Frame = -3

Query: 679 DICVYSLNKIRKILSSTSTAAVSETL----EGANLKISPPLVVQVLKQFQNAGLLNYYFF 512
           D  VY+ N + K   + +  A +  L    +  N++ +  +   +  +F+   +      
Sbjct: 106 DEAVYTFNVMDKFGLTPNLTAFNSLLSAFCKAKNVRKAQEIFDDMKDRFEPNSITYSILL 165

Query: 511 EWAGRQNGYSHSPEAYYAMIESAGK--IKKYGLMWTLL-------------KEMHAKRIL 377
           E  G++     + E +  MI+   +  I  YG+M   L             KEM ++  +
Sbjct: 166 EGWGKEPNLPKAREIFLEMIDKNCEPDIVTYGIMIDSLCKAGRVEEATGYMKEMRSRGCI 225

Query: 376 AKKP-FQIIIRSYALDKRFRMAVDTLQLMKDFGIWPELEDFNALLSALCKSRNVRKAQTL 200
                + I+I +Y +++    AVD+   M+  GI  ++  +NAL+SA C+++  +    +
Sbjct: 226 PTSYIYSILIHTYGVERSIGDAVDSFLEMEKDGIKADVAAYNALISAFCRAKKFKNVYRV 285

Query: 199 FDDM--KSVDGFKPDLKTYSILIQGWGKDPNLTMVKELFQQMLDCGCEPDAVVYGILINS 26
            ++M  KSV    P+ +T +I++ G            +F+ M+   CEPD+  Y ++I  
Sbjct: 286 LEEMDKKSV---APNSRTCNIILNGLIGSGETDEAFRIFKSMIK-HCEPDSDTYTMMIKM 341

Query: 25  LCKGGKME 2
            C+  K+E
Sbjct: 342 FCEIDKLE 349


>ref|XP_004251179.1| PREDICTED: pentatricopeptide repeat-containing protein At1g77360,
           mitochondrial-like [Solanum lycopersicum]
          Length = 478

 Score =  213 bits (541), Expect = 6e-53
 Identities = 101/220 (45%), Positives = 148/220 (67%)
 Frame = -3

Query: 661 LNKIRKILSSTSTAAVSETLEGANLKISPPLVVQVLKQFQNAGLLNYYFFEWAGRQNGYS 482
           L ++ KI+ S     +   L+ + +++ P +V  VLK+F+NAG+L Y FFEWAG+Q+ Y 
Sbjct: 33  LTRLCKIMMSCPKVGLDIELDQSGIRVLPEMVEDVLKRFENAGMLAYRFFEWAGKQHNYE 92

Query: 481 HSPEAYYAMIESAGKIKKYGLMWTLLKEMHAKRILAKKPFQIIIRSYALDKRFRMAVDTL 302
           HS  AY++MI S  KI++Y +MW L+ EM  KR+L  + F II+R YA  ++    + T 
Sbjct: 93  HSTRAYHSMIGSLAKIRQYQMMWDLVNEMKTKRMLNIETFCIIMRKYARAQKVEETLYTF 152

Query: 301 QLMKDFGIWPELEDFNALLSALCKSRNVRKAQTLFDDMKSVDGFKPDLKTYSILIQGWGK 122
            +M  F + P L  FN LLSALCKS+NV KAQ +FD  K  + F PD KTYSILI+GWG+
Sbjct: 153 HIMNKFDVPPNLAAFNGLLSALCKSKNVEKAQEIFDTKK--NEFTPDSKTYSILIEGWGR 210

Query: 121 DPNLTMVKELFQQMLDCGCEPDAVVYGILINSLCKGGKME 2
            PNL   +E++++M++ GC PD V YGI+++ LCK G+++
Sbjct: 211 APNLPKAREVYREMIEVGCNPDIVTYGIMVDILCKAGRVD 250



 Score = 64.3 bits (155), Expect = 3e-08
 Identities = 47/183 (25%), Positives = 86/183 (46%), Gaps = 16/183 (8%)
 Frame = -3

Query: 502 GRQNGYSHSPEAYYAMIESAGK--IKKYGLMWTLLKEM----HAKRILAKKPFQ------ 359
           GR      + E Y  MIE      I  YG+M  +L +      A  I+ +  F       
Sbjct: 209 GRAPNLPKAREVYREMIEVGCNPDIVTYGIMVDILCKAGRVDEAVEIVKEMDFSGCRPTS 268

Query: 358 ----IIIRSYALDKRFRMAVDTLQLMKDFGIWPELEDFNALLSALCKSRNVRKAQTLFDD 191
               +++ +Y L+ R   A+DT   M+  G+  ++  +N+L+SA CK    +    + +D
Sbjct: 269 FIYSVLVHTYGLENRIEDAIDTFLEMEKNGVEADVAVYNSLISAFCKVNKFQNVYMVLND 328

Query: 190 MKSVDGFKPDLKTYSILIQGWGKDPNLTMVKELFQQMLDCGCEPDAVVYGILINSLCKGG 11
           M+ + G  P+ +T +I++ G           ++F++ML   C+PDA  Y ++I   C+  
Sbjct: 329 MQ-IKGVSPNARTCNIILSGLIARGETDDAFKIFRRMLKI-CDPDADTYTMMIKMFCEKN 386

Query: 10  KME 2
           +M+
Sbjct: 387 EMK 389


>ref|XP_006390097.1| hypothetical protein EUTSA_v10018469mg [Eutrema salsugineum]
           gi|557086531|gb|ESQ27383.1| hypothetical protein
           EUTSA_v10018469mg [Eutrema salsugineum]
          Length = 482

 Score =  211 bits (538), Expect = 1e-52
 Identities = 102/225 (45%), Positives = 150/225 (66%)
 Frame = -3

Query: 679 DICVYSLNKIRKILSSTSTAAVSETLEGANLKISPPLVVQVLKQFQNAGLLNYYFFEWAG 500
           D+ V + NKI K++ S+    +   L+ + L++SP +V  VL +F+NAGLL Y FF+W+ 
Sbjct: 32  DVAVVA-NKISKVMMSSPQPVLDSALDQSGLRVSPEVVENVLNRFRNAGLLAYRFFQWSE 90

Query: 499 RQNGYSHSPEAYYAMIESAGKIKKYGLMWTLLKEMHAKRILAKKPFQIIIRSYALDKRFR 320
           +Q  Y HS  AY+ MIES  KIK+Y LMW L+  M  K+ L  + F I++R YA  ++  
Sbjct: 91  KQRHYEHSVRAYHMMIESTAKIKQYKLMWDLINSMRKKKTLNIETFCIVMRKYARAQKVD 150

Query: 319 MAVDTLQLMKDFGIWPELEDFNALLSALCKSRNVRKAQTLFDDMKSVDGFKPDLKTYSIL 140
            A+    +M+ + + P L  FN LLSALCKS+NVRKAQ +F+ M+  D F PD KTYSIL
Sbjct: 151 EAIYAFNVMEKYDLPPNLVAFNGLLSALCKSKNVRKAQEIFEKMR--DRFTPDSKTYSIL 208

Query: 139 IQGWGKDPNLTMVKELFQQMLDCGCEPDAVVYGILINSLCKGGKM 5
           + GWGK+PNL   +E+F+ M++ GC+PD V Y ++++ LCK G++
Sbjct: 209 LAGWGKEPNLPKAREVFRDMINAGCDPDIVTYSMMVDILCKAGRV 253



 Score = 60.1 bits (144), Expect = 6e-07
 Identities = 33/121 (27%), Positives = 65/121 (53%)
 Frame = -3

Query: 364 FQIIIRSYALDKRFRMAVDTLQLMKDFGIWPELEDFNALLSALCKSRNVRKAQTLFDDMK 185
           + +++ +   + R   AVDT   M+  GI P++  FN+L+ A CK+  ++    +  +MK
Sbjct: 275 YSVLVHTCGTENRLEEAVDTFLEMERSGIEPDVAVFNSLIGAFCKANRMKNVYRVLKEMK 334

Query: 184 SVDGFKPDLKTYSILIQGWGKDPNLTMVKELFQQMLDCGCEPDAVVYGILINSLCKGGKM 5
            V G  P+ K+ +I+++            ++F++M+   CEPDA  Y ++I   C+  +M
Sbjct: 335 -VKGVTPNSKSCNIILRHLIDRGEKDEAFDVFRKMIKV-CEPDADTYTMMIKMFCEKKEM 392

Query: 4   E 2
           +
Sbjct: 393 K 393


>gb|AAG29201.1|AC078898_11 hypothetical protein [Arabidopsis thaliana]
          Length = 481

 Score =  210 bits (535), Expect = 3e-52
 Identities = 99/217 (45%), Positives = 147/217 (67%)
 Frame = -3

Query: 652 IRKILSSTSTAAVSETLEGANLKISPPLVVQVLKQFQNAGLLNYYFFEWAGRQNGYSHSP 473
           I K+L S+    +   L+ + L++S  +V  VL +F+NAGLL Y FF+W+ +Q  Y HS 
Sbjct: 39  ISKVLMSSPQLVLDSALDQSGLRVSQEVVEDVLNRFRNAGLLTYRFFQWSEKQRHYEHSV 98

Query: 472 EAYYAMIESAGKIKKYGLMWTLLKEMHAKRILAKKPFQIIIRSYALDKRFRMAVDTLQLM 293
            AY+ MIES  KI++Y LMW L+  M  K++L  + F I++R YA  ++   A+    +M
Sbjct: 99  RAYHMMIESTAKIRQYKLMWDLINAMRKKKMLNVETFCIVMRKYARAQKVDEAIYAFNVM 158

Query: 292 KDFGIWPELEDFNALLSALCKSRNVRKAQTLFDDMKSVDGFKPDLKTYSILIQGWGKDPN 113
           + + + P L  FN LLSALCKS+NVRKAQ +F++M+  D F PD KTYSIL++GWGK+PN
Sbjct: 159 EKYDLPPNLVAFNGLLSALCKSKNVRKAQEVFENMR--DRFTPDSKTYSILLEGWGKEPN 216

Query: 112 LTMVKELFQQMLDCGCEPDAVVYGILINSLCKGGKME 2
           L   +E+F++M+D GC PD V Y I+++ LCK G+++
Sbjct: 217 LPKAREVFREMIDAGCHPDIVTYSIMVDILCKAGRVD 253



 Score = 61.2 bits (147), Expect = 3e-07
 Identities = 33/121 (27%), Positives = 66/121 (54%)
 Frame = -3

Query: 364 FQIIIRSYALDKRFRMAVDTLQLMKDFGIWPELEDFNALLSALCKSRNVRKAQTLFDDMK 185
           + +++ +Y  + R   AVDT   M+  G+  ++  FN+L+ A CK+  ++    +  +MK
Sbjct: 274 YSVLVHTYGTENRLEEAVDTFLEMERSGMKADVAVFNSLIGAFCKANRMKNVYRVLKEMK 333

Query: 184 SVDGFKPDLKTYSILIQGWGKDPNLTMVKELFQQMLDCGCEPDAVVYGILINSLCKGGKM 5
           S  G  P+ K+ +I+++   +        ++F++M+   CEPDA  Y ++I   C+  +M
Sbjct: 334 S-KGVTPNSKSCNIILRHLIERGEKDEAFDVFRKMIKV-CEPDADTYTMVIKMFCEKKEM 391

Query: 4   E 2
           E
Sbjct: 392 E 392


>ref|NP_177860.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|193806398|sp|Q9FVX2.2|PP129_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At1g77360, mitochondrial; Flags: Precursor
           gi|332197848|gb|AEE35969.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 517

 Score =  210 bits (535), Expect = 3e-52
 Identities = 99/217 (45%), Positives = 147/217 (67%)
 Frame = -3

Query: 652 IRKILSSTSTAAVSETLEGANLKISPPLVVQVLKQFQNAGLLNYYFFEWAGRQNGYSHSP 473
           I K+L S+    +   L+ + L++S  +V  VL +F+NAGLL Y FF+W+ +Q  Y HS 
Sbjct: 75  ISKVLMSSPQLVLDSALDQSGLRVSQEVVEDVLNRFRNAGLLTYRFFQWSEKQRHYEHSV 134

Query: 472 EAYYAMIESAGKIKKYGLMWTLLKEMHAKRILAKKPFQIIIRSYALDKRFRMAVDTLQLM 293
            AY+ MIES  KI++Y LMW L+  M  K++L  + F I++R YA  ++   A+    +M
Sbjct: 135 RAYHMMIESTAKIRQYKLMWDLINAMRKKKMLNVETFCIVMRKYARAQKVDEAIYAFNVM 194

Query: 292 KDFGIWPELEDFNALLSALCKSRNVRKAQTLFDDMKSVDGFKPDLKTYSILIQGWGKDPN 113
           + + + P L  FN LLSALCKS+NVRKAQ +F++M+  D F PD KTYSIL++GWGK+PN
Sbjct: 195 EKYDLPPNLVAFNGLLSALCKSKNVRKAQEVFENMR--DRFTPDSKTYSILLEGWGKEPN 252

Query: 112 LTMVKELFQQMLDCGCEPDAVVYGILINSLCKGGKME 2
           L   +E+F++M+D GC PD V Y I+++ LCK G+++
Sbjct: 253 LPKAREVFREMIDAGCHPDIVTYSIMVDILCKAGRVD 289



 Score = 61.2 bits (147), Expect = 3e-07
 Identities = 33/121 (27%), Positives = 66/121 (54%)
 Frame = -3

Query: 364 FQIIIRSYALDKRFRMAVDTLQLMKDFGIWPELEDFNALLSALCKSRNVRKAQTLFDDMK 185
           + +++ +Y  + R   AVDT   M+  G+  ++  FN+L+ A CK+  ++    +  +MK
Sbjct: 310 YSVLVHTYGTENRLEEAVDTFLEMERSGMKADVAVFNSLIGAFCKANRMKNVYRVLKEMK 369

Query: 184 SVDGFKPDLKTYSILIQGWGKDPNLTMVKELFQQMLDCGCEPDAVVYGILINSLCKGGKM 5
           S  G  P+ K+ +I+++   +        ++F++M+   CEPDA  Y ++I   C+  +M
Sbjct: 370 S-KGVTPNSKSCNIILRHLIERGEKDEAFDVFRKMIKV-CEPDADTYTMVIKMFCEKKEM 427

Query: 4   E 2
           E
Sbjct: 428 E 428


>ref|XP_004149431.1| PREDICTED: pentatricopeptide repeat-containing protein At1g77360,
           mitochondrial-like [Cucumis sativus]
           gi|449499065|ref|XP_004160711.1| PREDICTED:
           pentatricopeptide repeat-containing protein At1g77360,
           mitochondrial-like [Cucumis sativus]
          Length = 439

 Score =  209 bits (533), Expect = 5e-52
 Identities = 100/208 (48%), Positives = 143/208 (68%)
 Frame = -3

Query: 625 TAAVSETLEGANLKISPPLVVQVLKQFQNAGLLNYYFFEWAGRQNGYSHSPEAYYAMIES 446
           T A+   L+   ++ISP +   VL++F+NAG+L Y FFEWA +Q  Y HS  AY++MIES
Sbjct: 6   TLALETALDQTGIRISPEIAEPVLRRFENAGMLAYRFFEWASKQRNYVHSVRAYHSMIES 65

Query: 445 AGKIKKYGLMWTLLKEMHAKRILAKKPFQIIIRSYALDKRFRMAVDTLQLMKDFGIWPEL 266
             KI++Y ++W L+  M  K IL  + F II+R YA  ++   AV T  +M+ + + P +
Sbjct: 66  LAKIRQYQMVWDLVNAMRNKEILNVEAFCIIMRKYARAQKVEEAVYTFNVMEKYNMKPNV 125

Query: 265 EDFNALLSALCKSRNVRKAQTLFDDMKSVDGFKPDLKTYSILIQGWGKDPNLTMVKELFQ 86
             FN LLSALCKS+NVRKAQ +FD+MK  D F PD KTYSILI+GWG+ PNL   +E+++
Sbjct: 126 AAFNGLLSALCKSKNVRKAQEIFDNMK--DQFVPDSKTYSILIEGWGRAPNLPKAREIYR 183

Query: 85  QMLDCGCEPDAVVYGILINSLCKGGKME 2
           +M+D GC PD V Y I+++ LCK G+++
Sbjct: 184 EMIDSGCIPDEVTYSIMVDVLCKAGRVD 211



 Score = 57.4 bits (137), Expect = 4e-06
 Identities = 58/241 (24%), Positives = 101/241 (41%), Gaps = 24/241 (9%)
 Frame = -3

Query: 670 VYSLNKIRKILSSTSTAA----VSETLEGANLKISPPLVVQVLKQFQNAGLLNYYFFEWA 503
           VY+ N + K     + AA    +S   +  N++ +  +   +  QF           E  
Sbjct: 110 VYTFNVMEKYNMKPNVAAFNGLLSALCKSKNVRKAQEIFDNMKDQFVPDSKTYSILIEGW 169

Query: 502 GRQNGYSHSPEAYYAMIESAGKIKK---YGLMWTLL-------------KEMHAKRILAK 371
           GR      + E Y  MI+S G I     Y +M  +L             KEM        
Sbjct: 170 GRAPNLPKAREIYREMIDS-GCIPDEVTYSIMVDVLCKAGRVDEAVEIVKEMDYNNC--- 225

Query: 370 KP----FQIIIRSYALDKRFRMAVDTLQLMKDFGIWPELEDFNALLSALCKSRNVRKAQT 203
           KP    + +++ +Y ++ R   AV T   M+  G+  ++  +NAL+SA CK+  ++    
Sbjct: 226 KPSSFIYSVLVHTYGVENRIEDAVSTFLEMERNGVMADVAAYNALISAFCKANKMKNVYR 285

Query: 202 LFDDMKSVDGFKPDLKTYSILIQGWGKDPNLTMVKELFQQMLDCGCEPDAVVYGILINSL 23
           +  DM  + G  P+ +T +I+I             ++F++M+   CEPD   Y ++I   
Sbjct: 286 VLKDM-DLKGVNPNSRTCNIIINSLIGRGETDEAFKIFRRMIKV-CEPDVDSYTMIIKMF 343

Query: 22  C 20
           C
Sbjct: 344 C 344


>ref|XP_002520317.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223540536|gb|EEF42103.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 439

 Score =  209 bits (533), Expect = 5e-52
 Identities = 99/213 (46%), Positives = 144/213 (67%)
 Frame = -3

Query: 640 LSSTSTAAVSETLEGANLKISPPLVVQVLKQFQNAGLLNYYFFEWAGRQNGYSHSPEAYY 461
           + S+    +   L+   +++SP +V  VL++F+NAG++ Y FFEWA +Q  Y+HS  AY+
Sbjct: 1   MMSSPAVTLHTALDQNGIRVSPEIVEDVLRRFENAGMVAYRFFEWAEKQLHYTHSVRAYH 60

Query: 460 AMIESAGKIKKYGLMWTLLKEMHAKRILAKKPFQIIIRSYALDKRFRMAVDTLQLMKDFG 281
            MIES  KI++Y +MW L+  M  KR+L  + F II+R YA  ++   AV T  +M+ + 
Sbjct: 61  TMIESLAKIRQYQIMWDLINAMKRKRMLNVETFCIIMRKYARAQKLEEAVYTFNVMEKYD 120

Query: 280 IWPELEDFNALLSALCKSRNVRKAQTLFDDMKSVDGFKPDLKTYSILIQGWGKDPNLTMV 101
           + P L  FN L SALCKS+NVRKAQ +FD  K  D F PD KTY+IL++GWGK PNL   
Sbjct: 121 VPPNLAAFNGLFSALCKSKNVRKAQEIFDSSK--DRFVPDSKTYTILLEGWGKTPNLPKA 178

Query: 100 KELFQQMLDCGCEPDAVVYGILINSLCKGGKME 2
           +E+F++M+D GC PD V YGI+++ LCK G+++
Sbjct: 179 REIFREMVDVGCSPDIVTYGIMVDILCKAGRVD 211



 Score = 59.3 bits (142), Expect = 1e-06
 Identities = 31/121 (25%), Positives = 62/121 (51%)
 Frame = -3

Query: 364 FQIIIRSYALDKRFRMAVDTLQLMKDFGIWPELEDFNALLSALCKSRNVRKAQTLFDDMK 185
           + ++I +Y ++ R   AVDT   M+  G+  ++  +NAL+ A CK    +    + ++M 
Sbjct: 232 YSVLIHTYGIENRIEDAVDTFLGMEKNGVKADVAAYNALIGAFCKVNKFKNVYRVLNEM- 290

Query: 184 SVDGFKPDLKTYSILIQGWGKDPNLTMVKELFQQMLDCGCEPDAVVYGILINSLCKGGKM 5
              G +P+ +T +I++              +F++M+   CEPDA  Y ++I   C+  ++
Sbjct: 291 DYKGMQPNSRTLNIILNNLIARGETDEAFRVFRRMIKV-CEPDADTYTMMIKMFCERNEL 349

Query: 4   E 2
           E
Sbjct: 350 E 350


>gb|ESW09460.1| hypothetical protein PHAVU_009G129200g [Phaseolus vulgaris]
           gi|561010554|gb|ESW09461.1| hypothetical protein
           PHAVU_009G129200g [Phaseolus vulgaris]
          Length = 480

 Score =  209 bits (531), Expect = 8e-52
 Identities = 101/218 (46%), Positives = 144/218 (66%)
 Frame = -3

Query: 655 KIRKILSSTSTAAVSETLEGANLKISPPLVVQVLKQFQNAGLLNYYFFEWAGRQNGYSHS 476
           ++ K++ +  T  +   L    +++SP LV  VLK+F+NAG+  + FFEW+ +Q GYSHS
Sbjct: 37  RVSKVMMTCPTLGLDTALNQTGVRVSPDLVENVLKRFENAGMSAFRFFEWSEKQRGYSHS 96

Query: 475 PEAYYAMIESAGKIKKYGLMWTLLKEMHAKRILAKKPFQIIIRSYALDKRFRMAVDTLQL 296
             AY+ MIES  KI++Y ++W L+  M  K +L  + F I++R YA   +   AV T  +
Sbjct: 97  IRAYHLMIESLAKIRQYQIVWDLVNAMRKKGMLNVETFCIMMRKYARANKVDEAVYTFNV 156

Query: 295 MKDFGIWPELEDFNALLSALCKSRNVRKAQTLFDDMKSVDGFKPDLKTYSILIQGWGKDP 116
           M  + + P L  FN LLSALCKS NVRKAQ +FD MKS   F PD KTYSIL++GWGK P
Sbjct: 157 MDKYDVVPNLAAFNGLLSALCKSNNVRKAQEIFDAMKS--RFVPDAKTYSILLEGWGKAP 214

Query: 115 NLTMVKELFQQMLDCGCEPDAVVYGILINSLCKGGKME 2
           NL   +E+F +M+  GC+PD V YGI+++ LCK G+++
Sbjct: 215 NLPRAREVFGEMVRAGCDPDVVTYGIMVDVLCKAGRVD 252



 Score = 62.0 bits (149), Expect = 2e-07
 Identities = 32/121 (26%), Positives = 63/121 (52%)
 Frame = -3

Query: 364 FQIIIRSYALDKRFRMAVDTLQLMKDFGIWPELEDFNALLSALCKSRNVRKAQTLFDDMK 185
           + ++I +Y ++ R   A+DT Q M+  GI  ++  +NAL+ A CK    +    +  +M+
Sbjct: 273 YSVLIHTYGVEHRIEDAIDTFQEMERKGIKADVVVYNALIGAFCKVNKFKNVHRVLQEME 332

Query: 184 SVDGFKPDLKTYSILIQGWGKDPNLTMVKELFQQMLDCGCEPDAVVYGILINSLCKGGKM 5
            ++G  P+ +T +++I              +F++M+   CEPDA  Y ++I   C+   +
Sbjct: 333 -INGVAPNSRTCNVIISSMIGQGQTDRAFRVFRRMIKL-CEPDADTYTMMIKMFCEKNDV 390

Query: 4   E 2
           E
Sbjct: 391 E 391


>ref|XP_003526650.2| PREDICTED: pentatricopeptide repeat-containing protein At1g77360,
           mitochondrial-like isoform X1 [Glycine max]
          Length = 454

 Score =  207 bits (528), Expect = 2e-51
 Identities = 100/218 (45%), Positives = 145/218 (66%)
 Frame = -3

Query: 655 KIRKILSSTSTAAVSETLEGANLKISPPLVVQVLKQFQNAGLLNYYFFEWAGRQNGYSHS 476
           ++ K++ +  T  +   L    +++SP LV  VLK+F+NAG+  + FFEWA +Q GYSHS
Sbjct: 11  RVCKVMMTCPTLGLDTALNQTGVRVSPDLVENVLKRFENAGMPAFRFFEWAEKQRGYSHS 70

Query: 475 PEAYYAMIESAGKIKKYGLMWTLLKEMHAKRILAKKPFQIIIRSYALDKRFRMAVDTLQL 296
             AY+ MIES  KI++Y ++W L+  M  K +L  + F I++R YA   +   AV T  +
Sbjct: 71  IRAYHLMIESLAKIRQYQIVWDLVSAMRKKGMLNVETFCIMMRKYARANKVDEAVYTFNV 130

Query: 295 MKDFGIWPELEDFNALLSALCKSRNVRKAQTLFDDMKSVDGFKPDLKTYSILIQGWGKDP 116
           M  + + P L  FN LLSALCKS NVRKAQ +FD MK    F PD K+YSIL++GWGK P
Sbjct: 131 MDKYDVVPNLAAFNGLLSALCKSNNVRKAQEIFDAMKG--QFVPDEKSYSILLEGWGKAP 188

Query: 115 NLTMVKELFQQMLDCGCEPDAVVYGILINSLCKGGKME 2
           NL   +E+F++M++ GC+PD V YGI+++ LCK G+++
Sbjct: 189 NLPRAREVFREMVEAGCDPDVVTYGIMVDVLCKAGRVD 226



 Score = 58.5 bits (140), Expect = 2e-06
 Identities = 31/121 (25%), Positives = 61/121 (50%)
 Frame = -3

Query: 364 FQIIIRSYALDKRFRMAVDTLQLMKDFGIWPELEDFNALLSALCKSRNVRKAQTLFDDMK 185
           + +++ +Y ++ R   A+DT   M   GI  ++  +NAL+ A CK    +    +  +M+
Sbjct: 247 YSVLVHTYGVEHRIEDAIDTFLEMAKKGIKADVVAYNALIGAFCKVNKFKNVHRVLKEME 306

Query: 184 SVDGFKPDLKTYSILIQGWGKDPNLTMVKELFQQMLDCGCEPDAVVYGILINSLCKGGKM 5
           S +G  P+ +T +++I              +F +M+   CEPDA  Y ++I   C+  ++
Sbjct: 307 S-NGVAPNSRTCNVIISSMIGQGQTDRAFRVFCRMIKL-CEPDADTYTMMIKMFCEKNEL 364

Query: 4   E 2
           E
Sbjct: 365 E 365


>ref|XP_006581591.1| PREDICTED: pentatricopeptide repeat-containing protein At1g77360,
           mitochondrial-like isoform X2 [Glycine max]
           gi|571460055|ref|XP_006581592.1| PREDICTED:
           pentatricopeptide repeat-containing protein At1g77360,
           mitochondrial-like isoform X3 [Glycine max]
           gi|571460057|ref|XP_006581593.1| PREDICTED:
           pentatricopeptide repeat-containing protein At1g77360,
           mitochondrial-like isoform X4 [Glycine max]
           gi|571460059|ref|XP_006581594.1| PREDICTED:
           pentatricopeptide repeat-containing protein At1g77360,
           mitochondrial-like isoform X5 [Glycine max]
           gi|571460061|ref|XP_006581595.1| PREDICTED:
           pentatricopeptide repeat-containing protein At1g77360,
           mitochondrial-like isoform X6 [Glycine max]
          Length = 481

 Score =  207 bits (528), Expect = 2e-51
 Identities = 100/218 (45%), Positives = 145/218 (66%)
 Frame = -3

Query: 655 KIRKILSSTSTAAVSETLEGANLKISPPLVVQVLKQFQNAGLLNYYFFEWAGRQNGYSHS 476
           ++ K++ +  T  +   L    +++SP LV  VLK+F+NAG+  + FFEWA +Q GYSHS
Sbjct: 38  RVCKVMMTCPTLGLDTALNQTGVRVSPDLVENVLKRFENAGMPAFRFFEWAEKQRGYSHS 97

Query: 475 PEAYYAMIESAGKIKKYGLMWTLLKEMHAKRILAKKPFQIIIRSYALDKRFRMAVDTLQL 296
             AY+ MIES  KI++Y ++W L+  M  K +L  + F I++R YA   +   AV T  +
Sbjct: 98  IRAYHLMIESLAKIRQYQIVWDLVSAMRKKGMLNVETFCIMMRKYARANKVDEAVYTFNV 157

Query: 295 MKDFGIWPELEDFNALLSALCKSRNVRKAQTLFDDMKSVDGFKPDLKTYSILIQGWGKDP 116
           M  + + P L  FN LLSALCKS NVRKAQ +FD MK    F PD K+YSIL++GWGK P
Sbjct: 158 MDKYDVVPNLAAFNGLLSALCKSNNVRKAQEIFDAMKG--QFVPDEKSYSILLEGWGKAP 215

Query: 115 NLTMVKELFQQMLDCGCEPDAVVYGILINSLCKGGKME 2
           NL   +E+F++M++ GC+PD V YGI+++ LCK G+++
Sbjct: 216 NLPRAREVFREMVEAGCDPDVVTYGIMVDVLCKAGRVD 253



 Score = 58.5 bits (140), Expect = 2e-06
 Identities = 31/121 (25%), Positives = 61/121 (50%)
 Frame = -3

Query: 364 FQIIIRSYALDKRFRMAVDTLQLMKDFGIWPELEDFNALLSALCKSRNVRKAQTLFDDMK 185
           + +++ +Y ++ R   A+DT   M   GI  ++  +NAL+ A CK    +    +  +M+
Sbjct: 274 YSVLVHTYGVEHRIEDAIDTFLEMAKKGIKADVVAYNALIGAFCKVNKFKNVHRVLKEME 333

Query: 184 SVDGFKPDLKTYSILIQGWGKDPNLTMVKELFQQMLDCGCEPDAVVYGILINSLCKGGKM 5
           S +G  P+ +T +++I              +F +M+   CEPDA  Y ++I   C+  ++
Sbjct: 334 S-NGVAPNSRTCNVIISSMIGQGQTDRAFRVFCRMIKL-CEPDADTYTMMIKMFCEKNEL 391

Query: 4   E 2
           E
Sbjct: 392 E 392


>ref|XP_002280443.1| PREDICTED: pentatricopeptide repeat-containing protein At1g71060,
           mitochondrial [Vitis vinifera]
          Length = 531

 Score =  207 bits (527), Expect = 2e-51
 Identities = 97/218 (44%), Positives = 154/218 (70%)
 Frame = -3

Query: 655 KIRKILSSTSTAAVSETLEGANLKISPPLVVQVLKQFQNAGLLNYYFFEWAGRQNGYSHS 476
           K+ K+L + S +++   L GA++ +SP LV++VLK+  N+G++   FF WA +Q G+ +S
Sbjct: 85  KLCKLLCTHSNSSIESLLNGASVDVSPTLVLEVLKKLSNSGVIALSFFRWAEKQKGFKYS 144

Query: 475 PEAYYAMIESAGKIKKYGLMWTLLKEMHAKRILAKKPFQIIIRSYALDKRFRMAVDTLQL 296
            E Y A+IE+ GKIK++ ++W L+ +M +K +L ++ F +I R YA  ++ + AV+T + 
Sbjct: 145 TENYNALIEALGKIKQFKMIWNLVNDMRSKGLLTQETFALISRRYARARKVKEAVETFEK 204

Query: 295 MKDFGIWPELEDFNALLSALCKSRNVRKAQTLFDDMKSVDGFKPDLKTYSILIQGWGKDP 116
           M+ FG+ P L DFN LL ALCKSR+V +AQ +FD MK    F+PD+K+Y+IL++GWG++ 
Sbjct: 205 MEKFGLQPVLSDFNRLLDALCKSRHVERAQEVFDKMKD-RKFRPDIKSYTILLEGWGQEQ 263

Query: 115 NLTMVKELFQQMLDCGCEPDAVVYGILINSLCKGGKME 2
           NL  + E++++M D G EPDAV YGILIN+ CK  + +
Sbjct: 264 NLLRLDEVYREMKDEGFEPDAVTYGILINAHCKARRYD 301



 Score = 63.5 bits (153), Expect = 6e-08
 Identities = 37/160 (23%), Positives = 72/160 (45%), Gaps = 1/160 (0%)
 Frame = -3

Query: 478 SPEAYYAMIESAGKIKKYGLMWTLLKEMHAKRILAKKP-FQIIIRSYALDKRFRMAVDTL 302
           +P  Y  +I   G  ++        +   A     + P +  ++ SY    R   A   +
Sbjct: 318 TPHIYCTLINGLGSERRLTEALQFFERSKASGFTPEAPTYNAVVGSYCQSMRMDDAYRIV 377

Query: 301 QLMKDFGIWPELEDFNALLSALCKSRNVRKAQTLFDDMKSVDGFKPDLKTYSILIQGWGK 122
             M+  G+ P+   ++ +L  L K+R  ++A  +F  M S  G +P + TY I+++ +  
Sbjct: 378 DEMRKCGVGPQTRTYDIILHHLIKARRTKEAYRVFQGMSSEPGCEPSVSTYEIVVRMFCN 437

Query: 121 DPNLTMVKELFQQMLDCGCEPDAVVYGILINSLCKGGKME 2
           +  + M   ++ +M   G  P   ++  LINSLC   K++
Sbjct: 438 EERVDMALRVWDEMKAKGVLPGMHMFSTLINSLCYENKLD 477