BLASTX nr result
ID: Ephedra25_contig00026429
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra25_contig00026429
(486 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006856878.1| hypothetical protein AMTR_s00055p00197790 [A... 71 1e-10
ref|XP_004952915.1| PREDICTED: pentatricopeptide repeat-containi... 63 5e-08
gb|EOX93462.1| Pentatricopeptide repeat-containing protein, puta... 62 6e-08
gb|EOX93461.1| Pentatricopeptide repeat-containing protein, puta... 62 6e-08
ref|XP_002531694.1| pentatricopeptide repeat-containing protein,... 62 8e-08
gb|EMT17510.1| hypothetical protein F775_17166 [Aegilops tauschii] 60 2e-07
ref|XP_006357235.1| PREDICTED: pentatricopeptide repeat-containi... 59 5e-07
gb|AFW62765.1| hypothetical protein ZEAMMB73_408366 [Zea mays] 59 7e-07
ref|XP_003548443.1| PREDICTED: pentatricopeptide repeat-containi... 58 1e-06
ref|XP_002511467.1| pentatricopeptide repeat-containing protein,... 58 1e-06
ref|XP_006363010.1| PREDICTED: pentatricopeptide repeat-containi... 57 3e-06
ref|XP_003633341.1| PREDICTED: pentatricopeptide repeat-containi... 57 3e-06
emb|CAN78867.1| hypothetical protein VITISV_041982 [Vitis vinifera] 57 3e-06
ref|XP_004512573.1| PREDICTED: pentatricopeptide repeat-containi... 56 4e-06
ref|XP_004512571.1| PREDICTED: pentatricopeptide repeat-containi... 56 4e-06
ref|XP_004243553.1| PREDICTED: pentatricopeptide repeat-containi... 56 4e-06
ref|XP_004239371.1| PREDICTED: pentatricopeptide repeat-containi... 55 7e-06
gb|EMT22252.1| hypothetical protein F775_04062 [Aegilops tauschii] 55 1e-05
>ref|XP_006856878.1| hypothetical protein AMTR_s00055p00197790 [Amborella trichopoda]
gi|548860812|gb|ERN18345.1| hypothetical protein
AMTR_s00055p00197790 [Amborella trichopoda]
Length = 940
Score = 71.2 bits (173), Expect = 1e-10
Identities = 36/95 (37%), Positives = 53/95 (55%), Gaps = 1/95 (1%)
Frame = +1
Query: 7 MTAKGVEPSLVVFKSLIPLLYSKGKEEDADRLFESATNI-FTPDEIIWSVLVDGFLHTGD 183
M G EPSL ++K+L+ L + E+A LF + + P+E+IW+VL+DG L G+
Sbjct: 827 MITNGFEPSLAIYKALLFSLCKDNRGEEAQALFNNMLGAQWNPNEVIWTVLIDGLLKEGN 886
Query: 184 SQTCLNLFKRMRETSCQPSPQSCKILMAEIHKHKK 288
S+ CL M E C P+ Q+ IL E+ K K
Sbjct: 887 SEMCLKFLHEMEEKGCTPNFQTYVILAREMSKEDK 921
Score = 55.1 bits (131), Expect = 1e-05
Identities = 28/88 (31%), Positives = 51/88 (57%), Gaps = 1/88 (1%)
Frame = +1
Query: 28 PSLVVFKSLIPLLYSKGKEEDADRLFESATNI-FTPDEIIWSVLVDGFLHTGDSQTCLNL 204
P+L + +LI L +GK E+A+ + + I PDE+ ++ L+DGF+ G L L
Sbjct: 647 PNLHTYSALIHGLCQEGKAEEAEMMVKKIEEIGLNPDEVTYTSLIDGFVLLGQMDHALQL 706
Query: 205 FKRMRETSCQPSPQSCKILMAEIHKHKK 288
KRM + +C+P+ ++ +L+ + K K+
Sbjct: 707 VKRMIDANCKPNYRTYGVLIKGLQKEKQ 734
>ref|XP_004952915.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Setaria italica]
Length = 820
Score = 62.8 bits (151), Expect = 5e-08
Identities = 29/91 (31%), Positives = 55/91 (60%), Gaps = 1/91 (1%)
Frame = +1
Query: 4 SMTAKGVEPSLVVFKSLIPLLYSKGKEEDADRLF-ESATNIFTPDEIIWSVLVDGFLHTG 180
SM +G P+L+ ++ L+ L ++G+E+ A +F +S + PDEI+W V++DGF+ G
Sbjct: 726 SMIGRGFLPNLLSYQHLLSGLTAEGQEDRAKEIFRDSRWKDYNPDEIVWKVIIDGFIRKG 785
Query: 181 DSQTCLNLFKRMRETSCQPSPQSCKILMAEI 273
S C ++ + + +C+ S Q+ +L E+
Sbjct: 786 RSDMCHDMISTLEQMNCKLSDQTYAMLTEEL 816
>gb|EOX93462.1| Pentatricopeptide repeat-containing protein, putative isoform 2
[Theobroma cacao] gi|508701567|gb|EOX93463.1|
Pentatricopeptide repeat-containing protein, putative
isoform 2 [Theobroma cacao]
Length = 716
Score = 62.4 bits (150), Expect = 6e-08
Identities = 33/90 (36%), Positives = 50/90 (55%), Gaps = 1/90 (1%)
Frame = +1
Query: 16 KGVEPSLVVFKSLIPLLYSKGKEEDADRLFESATNI-FTPDEIIWSVLVDGFLHTGDSQT 192
KG EP L ++ +I L G+ ++ LFES ++ DEI+W+VL+DG L G+S
Sbjct: 608 KGWEPPLSNYREVICALCKAGRVKEVQNLFESLIEKQWSSDEIVWTVLIDGLLKEGESDL 667
Query: 193 CLNLFKRMRETSCQPSPQSCKILMAEIHKH 282
C+ L M +C P+ Q+ IL E K+
Sbjct: 668 CMKLLHVMESRNCPPNFQTYVILAREFSKY 697
>gb|EOX93461.1| Pentatricopeptide repeat-containing protein, putative isoform 1
[Theobroma cacao]
Length = 909
Score = 62.4 bits (150), Expect = 6e-08
Identities = 33/90 (36%), Positives = 50/90 (55%), Gaps = 1/90 (1%)
Frame = +1
Query: 16 KGVEPSLVVFKSLIPLLYSKGKEEDADRLFESATNI-FTPDEIIWSVLVDGFLHTGDSQT 192
KG EP L ++ +I L G+ ++ LFES ++ DEI+W+VL+DG L G+S
Sbjct: 801 KGWEPPLSNYREVICALCKAGRVKEVQNLFESLIEKQWSSDEIVWTVLIDGLLKEGESDL 860
Query: 193 CLNLFKRMRETSCQPSPQSCKILMAEIHKH 282
C+ L M +C P+ Q+ IL E K+
Sbjct: 861 CMKLLHVMESRNCPPNFQTYVILAREFSKY 890
>ref|XP_002531694.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223528670|gb|EEF30685.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 821
Score = 62.0 bits (149), Expect = 8e-08
Identities = 34/92 (36%), Positives = 48/92 (52%), Gaps = 1/92 (1%)
Frame = +1
Query: 7 MTAKGVEPSLVVFKSLIPLLYSKGKEEDADRLFESATNI-FTPDEIIWSVLVDGFLHTGD 183
M KG +P L ++K LI L + E+A +F+S + D I+W+VLVDG L GD
Sbjct: 709 MAVKGFQPHLFIYKVLICALCGVSRAEEALNIFQSLLKKQWNSDLIVWTVLVDGLLQEGD 768
Query: 184 SQTCLNLFKRMRETSCQPSPQSCKILMAEIHK 279
S C+ M +C PS + IL E+ K
Sbjct: 769 SDLCMKFLYLMESRNCTPSLHTYIILARELSK 800
>gb|EMT17510.1| hypothetical protein F775_17166 [Aegilops tauschii]
Length = 683
Score = 60.5 bits (145), Expect = 2e-07
Identities = 28/91 (30%), Positives = 52/91 (57%), Gaps = 1/91 (1%)
Frame = +1
Query: 4 SMTAKGVEPSLVVFKSLIPLLYSKGKEEDADRLFESAT-NIFTPDEIIWSVLVDGFLHTG 180
SM G P L+ ++ L+ L S+G+ A+ +F + + PDEI+W V++DG + G
Sbjct: 589 SMIGCGFVPQLMSYQHLLCGLISEGQAHMAEEIFGNCRWEDYNPDEIVWKVIIDGLIRNG 648
Query: 181 DSQTCLNLFKRMRETSCQPSPQSCKILMAEI 273
S C ++ ++ + +C+PS Q+ +L E+
Sbjct: 649 HSDICRDMVSKLEQRNCRPSNQTYAMLAEEL 679
>ref|XP_006357235.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
mitochondrial-like isoform X1 [Solanum tuberosum]
gi|565381772|ref|XP_006357236.1| PREDICTED:
pentatricopeptide repeat-containing protein At1g05670,
mitochondrial-like isoform X2 [Solanum tuberosum]
gi|565381775|ref|XP_006357237.1| PREDICTED:
pentatricopeptide repeat-containing protein At1g05670,
mitochondrial-like isoform X3 [Solanum tuberosum]
Length = 752
Score = 59.3 bits (142), Expect = 5e-07
Identities = 34/110 (30%), Positives = 55/110 (50%), Gaps = 10/110 (9%)
Frame = +1
Query: 7 MTAKGVEPSLVVFKSLIPLLYSKGKEEDADRLFESATNI-FTPDEIIWSVLVDGFLHTGD 183
M KG++P+ F S+I LL +GK DA+++ T+ TPD ++++ L+DGF TG+
Sbjct: 318 MQVKGLKPNAFTFNSIILLLSKRGKVHDAEKILREMTSQGITPDNVVYTTLIDGFCKTGN 377
Query: 184 SQTCLNLFKRMRETSCQPSPQSCKIL---------MAEIHKHKKYFKGKG 306
+LF M+ + P + L +AE K Y G+G
Sbjct: 378 ISAAYSLFNEMQSLNITPDLITYTALISGLCHTGNIAEADKLLNYMLGRG 427
>gb|AFW62765.1| hypothetical protein ZEAMMB73_408366 [Zea mays]
Length = 820
Score = 58.9 bits (141), Expect = 7e-07
Identities = 26/91 (28%), Positives = 52/91 (57%), Gaps = 1/91 (1%)
Frame = +1
Query: 4 SMTAKGVEPSLVVFKSLIPLLYSKGKEEDADRLFESAT-NIFTPDEIIWSVLVDGFLHTG 180
SM G P+L+ ++ L+ L ++G+ + A +F S+ + DEI+W V++DGF+ G
Sbjct: 726 SMIGHGFLPNLIFYQYLLSGLTAEGQADRAKEIFRSSRWKEYNTDEIVWKVIIDGFIRKG 785
Query: 181 DSQTCLNLFKRMRETSCQPSPQSCKILMAEI 273
+ C ++ + + C+PS ++ +L E+
Sbjct: 786 HADMCHDMISMLEQMKCKPSDETYAMLTEEL 816
>ref|XP_003548443.1| PREDICTED: pentatricopeptide repeat-containing protein At3g61520,
mitochondrial-like [Glycine max]
Length = 746
Score = 58.2 bits (139), Expect = 1e-06
Identities = 37/107 (34%), Positives = 55/107 (51%), Gaps = 11/107 (10%)
Frame = +1
Query: 19 GVEPSLVVFKSLIPLLYSKGKEEDADRLFESAT--NIFTPDEIIWSVLVDGFLHTGDSQT 192
GVEP +V+F +LI L GKEED L E NI P+ + ++ L+DGF G+
Sbjct: 352 GVEPDVVLFNTLIDGLCKVGKEEDGLSLLEEMKMGNINRPNTVTYNCLIDGFFKAGNFDR 411
Query: 193 CLNLFKRMRETSCQPSPQSCKILM------AEIHKHKKYF---KGKG 306
LF++M E QP+ + L+ +H+ ++F KGKG
Sbjct: 412 AHELFRQMNEEGVQPNVITLNTLVDGLCKHGRVHRAVEFFNEMKGKG 458
>ref|XP_002511467.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223550582|gb|EEF52069.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 482
Score = 58.2 bits (139), Expect = 1e-06
Identities = 32/102 (31%), Positives = 53/102 (51%), Gaps = 1/102 (0%)
Frame = +1
Query: 7 MTAKGVEPSLVVFKSLIPLLYSKGKEEDADRLFESATNI-FTPDEIIWSVLVDGFLHTGD 183
M GV PS+ F +LI +L K E+A +FE + P+ I +++++ G H G+
Sbjct: 292 MVKDGVLPSVATFNALIQILCKKDSVENAILIFEEMVKRGYVPNSITYNLVIRGLCHVGE 351
Query: 184 SQTCLNLFKRMRETSCQPSPQSCKILMAEIHKHKKYFKGKGE 309
Q + L +RM + C+P+ Q+ IL+ +YF GE
Sbjct: 352 MQRAMELMERMEDDDCEPNVQTYNILI-------RYFCDAGE 386
>ref|XP_006363010.1| PREDICTED: pentatricopeptide repeat-containing protein At5g65560-like
isoform X1 [Solanum tuberosum]
gi|565394734|ref|XP_006363011.1| PREDICTED:
pentatricopeptide repeat-containing protein
At5g65560-like isoform X2 [Solanum tuberosum]
gi|565394736|ref|XP_006363012.1| PREDICTED:
pentatricopeptide repeat-containing protein
At5g65560-like isoform X3 [Solanum tuberosum]
Length = 913
Score = 57.0 bits (136), Expect = 3e-06
Identities = 31/93 (33%), Positives = 51/93 (54%), Gaps = 1/93 (1%)
Frame = +1
Query: 4 SMTAKGVEPSLVVFKSLIPLLYSKGKEEDADRLFESATNI-FTPDEIIWSVLVDGFLHTG 180
S+ +G P L +++SLI L + ++ + LFE+ + DEI+W++L+DG L
Sbjct: 818 SLIQQGFRPPLSIYQSLICALCRSSRLKEVEVLFENMLGKKWNNDEIVWTILIDGLLKER 877
Query: 181 DSQTCLNLFKRMRETSCQPSPQSCKILMAEIHK 279
+S+ C+ L M SC S Q+ IL E+ K
Sbjct: 878 ESELCMKLLHVMESKSCNISFQTYVILARELSK 910
>ref|XP_003633341.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Vitis vinifera]
Length = 822
Score = 57.0 bits (136), Expect = 3e-06
Identities = 32/93 (34%), Positives = 52/93 (55%), Gaps = 1/93 (1%)
Frame = +1
Query: 4 SMTAKGVEPSLVVFKSLIPLLYSKGKEEDADRLFESATNI-FTPDEIIWSVLVDGFLHTG 180
S+ AKG + L ++++LI L G+ E+A LF++ + DEI+W+VLVDG L G
Sbjct: 709 SIEAKGFQLHLSIYRALICALCKAGQVEEAQALFDNMLEKEWNADEIVWTVLVDGLLKEG 768
Query: 181 DSQTCLNLFKRMRETSCQPSPQSCKILMAEIHK 279
+ C+ L M + P+ Q+ IL E+ +
Sbjct: 769 ELDLCMKLLHIMESKNFTPNIQTYVILGRELSR 801
>emb|CAN78867.1| hypothetical protein VITISV_041982 [Vitis vinifera]
Length = 962
Score = 57.0 bits (136), Expect = 3e-06
Identities = 32/93 (34%), Positives = 52/93 (55%), Gaps = 1/93 (1%)
Frame = +1
Query: 4 SMTAKGVEPSLVVFKSLIPLLYSKGKEEDADRLFESATNI-FTPDEIIWSVLVDGFLHTG 180
S+ AKG + L ++++LI L G+ E+A LF++ + DEI+W+VLVDG L G
Sbjct: 849 SIEAKGFQLHLSIYRALICALCKAGQVEEAQALFDNMLEKEWNADEIVWTVLVDGLLKEG 908
Query: 181 DSQTCLNLFKRMRETSCQPSPQSCKILMAEIHK 279
+ C+ L M + P+ Q+ IL E+ +
Sbjct: 909 ELDLCMKLLHIMESKNFTPNIQTYVILGRELSR 941
>ref|XP_004512573.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like isoform X3 [Cicer arietinum]
Length = 690
Score = 56.2 bits (134), Expect = 4e-06
Identities = 29/93 (31%), Positives = 48/93 (51%), Gaps = 5/93 (5%)
Frame = +1
Query: 43 FKSLIPLLYSKGKEEDADRLFESATNI-FTPDEIIWSVLVDGFLHTGDSQTCLNLFKRMR 219
+K LI L+ +G EE A+ +F S + + DE++W VL+DG + G + C L M
Sbjct: 581 YKLLICRLFEQGNEEKAEAIFHSLLSCGYNYDEVVWKVLIDGLIKRGYTDQCSKLRNIME 640
Query: 220 ETSCQPSPQSCKILMAEIHKHKK----YFKGKG 306
C ++C +L E+++ K +F G G
Sbjct: 641 NNGCPVHSETCSMLTQELNEIKSDECVFFPGNG 673
>ref|XP_004512571.1| PREDICTED: pentatricopeptide repeat-containing protein At5g65560-like
isoform X1 [Cicer arietinum]
gi|502162660|ref|XP_004512572.1| PREDICTED:
pentatricopeptide repeat-containing protein
At5g65560-like isoform X2 [Cicer arietinum]
Length = 927
Score = 56.2 bits (134), Expect = 4e-06
Identities = 29/93 (31%), Positives = 48/93 (51%), Gaps = 5/93 (5%)
Frame = +1
Query: 43 FKSLIPLLYSKGKEEDADRLFESATNI-FTPDEIIWSVLVDGFLHTGDSQTCLNLFKRMR 219
+K LI L+ +G EE A+ +F S + + DE++W VL+DG + G + C L M
Sbjct: 818 YKLLICRLFEQGNEEKAEAIFHSLLSCGYNYDEVVWKVLIDGLIKRGYTDQCSKLRNIME 877
Query: 220 ETSCQPSPQSCKILMAEIHKHKK----YFKGKG 306
C ++C +L E+++ K +F G G
Sbjct: 878 NNGCPVHSETCSMLTQELNEIKSDECVFFPGNG 910
>ref|XP_004243553.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Solanum lycopersicum]
Length = 815
Score = 56.2 bits (134), Expect = 4e-06
Identities = 30/93 (32%), Positives = 52/93 (55%), Gaps = 1/93 (1%)
Frame = +1
Query: 4 SMTAKGVEPSLVVFKSLIPLLYSKGKEEDADRLFESATNI-FTPDEIIWSVLVDGFLHTG 180
S+ +G +P L +++SLI L + ++ + LFE+ + DEI+W++L+DG L
Sbjct: 720 SLIQQGFQPPLSIYQSLICALCRSSRLKEVEVLFENMLEKKWNNDEIVWTILIDGLLKER 779
Query: 181 DSQTCLNLFKRMRETSCQPSPQSCKILMAEIHK 279
+S+ C+ L M SC S Q+ IL ++ K
Sbjct: 780 ESELCMKLLHVMESKSCNISFQTYVILARKLSK 812
>ref|XP_004239371.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
mitochondrial-like [Solanum lycopersicum]
Length = 1132
Score = 55.5 bits (132), Expect = 7e-06
Identities = 26/78 (33%), Positives = 43/78 (55%), Gaps = 1/78 (1%)
Frame = +1
Query: 7 MTAKGVEPSLVVFKSLIPLLYSKGKEEDADRLFESATNI-FTPDEIIWSVLVDGFLHTGD 183
M KG++P+ F S+I LL +GK DA+++ T+ T D ++++ L+DGF TG+
Sbjct: 318 MQVKGLKPNAFTFNSIILLLSKRGKVHDAEKILREMTSQRITADNVVYTTLIDGFCKTGN 377
Query: 184 SQTCLNLFKRMRETSCQP 237
LF M+ + P
Sbjct: 378 ISAAYGLFNEMQSLNISP 395
>gb|EMT22252.1| hypothetical protein F775_04062 [Aegilops tauschii]
Length = 347
Score = 55.1 bits (131), Expect = 1e-05
Identities = 25/87 (28%), Positives = 48/87 (55%), Gaps = 1/87 (1%)
Frame = +1
Query: 7 MTAKGVEPSLVVFKSLIPLLYSKGKEEDADRLFESATNI-FTPDEIIWSVLVDGFLHTGD 183
M+ +G PS+ + +LI ++ KG EDA +F+ + P+ + ++VL+ G H G
Sbjct: 156 MSKEGCTPSVATYNALIQVICKKGNVEDAVTVFDDMVRQDYVPNVVTYTVLIRGLCHAGK 215
Query: 184 SQTCLNLFKRMRETSCQPSPQSCKILM 264
+ L +RM++ C+P Q+ +L+
Sbjct: 216 IDRAMKLMERMKDEGCEPVVQTYNVLI 242