BLASTX nr result
ID: Ephedra25_contig00026304
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra25_contig00026304
(545 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003638250.1| ATP-dependent RNA helicase A-like protein [M... 97 2e-18
ref|XP_004301561.1| PREDICTED: probable ATP-dependent RNA helica... 97 3e-18
emb|CBI18267.3| unnamed protein product [Vitis vinifera] 96 7e-18
ref|XP_002269787.1| PREDICTED: probable ATP-dependent RNA helica... 96 7e-18
ref|XP_006826345.1| hypothetical protein AMTR_s00004p00115360 [A... 95 1e-17
ref|XP_006585701.1| PREDICTED: probable ATP-dependent RNA helica... 95 1e-17
gb|EOY19401.1| DEA(D/H)-box RNA helicase family protein isoform ... 94 2e-17
gb|EOY19400.1| DEA(D/H)-box RNA helicase family protein isoform ... 94 2e-17
gb|EOY19399.1| DEA(D/H)-box RNA helicase family protein isoform ... 94 2e-17
gb|EOY19398.1| DEA(D/H)-box RNA helicase family protein isoform ... 94 2e-17
gb|ESW05506.1| hypothetical protein PHAVU_011G1853001g, partial ... 94 3e-17
ref|XP_004228918.1| PREDICTED: probable ATP-dependent RNA helica... 94 3e-17
ref|XP_006348421.1| PREDICTED: probable ATP-dependent RNA helica... 92 6e-17
ref|XP_004511172.1| PREDICTED: probable ATP-dependent RNA helica... 92 6e-17
ref|XP_002310975.2| hypothetical protein POPTR_0008s01470g [Popu... 92 8e-17
gb|EXB97687.1| putative ATP-dependent RNA helicase DHX36 [Morus ... 91 1e-16
ref|XP_002316463.2| hypothetical protein POPTR_0010s25230g [Popu... 91 2e-16
ref|XP_006398944.1| hypothetical protein EUTSA_v10012492mg [Eutr... 91 2e-16
gb|EMT15182.1| Putative ATP-dependent RNA helicase DHX36 [Aegilo... 90 4e-16
gb|EMS54496.1| putative ATP-dependent RNA helicase DHX36 [Tritic... 90 4e-16
>ref|XP_003638250.1| ATP-dependent RNA helicase A-like protein [Medicago truncatula]
gi|355504185|gb|AES85388.1| ATP-dependent RNA helicase
A-like protein [Medicago truncatula]
Length = 279
Score = 97.1 bits (240), Expect = 2e-18
Identities = 55/116 (47%), Positives = 75/116 (64%), Gaps = 3/116 (2%)
Frame = +2
Query: 206 SRSSLQFLKLRGHGIRFLGSSHSFLDVLKPLQNPRFKNSVLNLCNPSLVRHFSAF---EQ 376
+++SLQF R RFL S+ L L + RF ++ R FS + EQ
Sbjct: 15 AKNSLQF---RHRNYRFLTSTSPLL-----LLSTRFSKPFIS------TRFFSGYYNVEQ 60
Query: 377 FSDDEYDDDFQQQNACSSVANIDEWRWKLSLFLRNKEEKEIVSRDKSDKRDYEQIS 544
FSDDEY+ DF+ A S+VAN+DEW+WKLS+ LRN++++EIVSRDK D+RDYEQI+
Sbjct: 61 FSDDEYECDFENHQASSTVANVDEWKWKLSMLLRNEKDQEIVSRDKRDRRDYEQIA 116
>ref|XP_004301561.1| PREDICTED: probable ATP-dependent RNA helicase DHX36-like [Fragaria
vesca subsp. vesca]
Length = 993
Score = 96.7 bits (239), Expect = 3e-18
Identities = 49/78 (62%), Positives = 62/78 (79%)
Frame = +2
Query: 311 FKNSVLNLCNPSLVRHFSAFEQFSDDEYDDDFQQQNACSSVANIDEWRWKLSLFLRNKEE 490
F++ L LC + R ++A EQFSDDEY+ DF+ Q A SSVANIDEW+WKLSL LR+ ++
Sbjct: 25 FRSHHLTLCLSN--RRYTA-EQFSDDEYECDFESQKASSSVANIDEWKWKLSLLLRSDKD 81
Query: 491 KEIVSRDKSDKRDYEQIS 544
+EIVSRDK D+RDYEQIS
Sbjct: 82 QEIVSRDKRDRRDYEQIS 99
>emb|CBI18267.3| unnamed protein product [Vitis vinifera]
Length = 1162
Score = 95.5 bits (236), Expect = 7e-18
Identities = 44/60 (73%), Positives = 51/60 (85%)
Frame = +2
Query: 365 AFEQFSDDEYDDDFQQQNACSSVANIDEWRWKLSLFLRNKEEKEIVSRDKSDKRDYEQIS 544
A EQFSDDEYD DF+ A SSVANIDEW+WKLSL RN++++EIVSRDK D+RDYEQIS
Sbjct: 46 AAEQFSDDEYDCDFESHKASSSVANIDEWKWKLSLLSRNEQDQEIVSRDKKDRRDYEQIS 105
>ref|XP_002269787.1| PREDICTED: probable ATP-dependent RNA helicase DHX36 [Vitis
vinifera]
Length = 1136
Score = 95.5 bits (236), Expect = 7e-18
Identities = 44/60 (73%), Positives = 51/60 (85%)
Frame = +2
Query: 365 AFEQFSDDEYDDDFQQQNACSSVANIDEWRWKLSLFLRNKEEKEIVSRDKSDKRDYEQIS 544
A EQFSDDEYD DF+ A SSVANIDEW+WKLSL RN++++EIVSRDK D+RDYEQIS
Sbjct: 46 AAEQFSDDEYDCDFESHKASSSVANIDEWKWKLSLLSRNEQDQEIVSRDKKDRRDYEQIS 105
>ref|XP_006826345.1| hypothetical protein AMTR_s00004p00115360 [Amborella trichopoda]
gi|548830659|gb|ERM93582.1| hypothetical protein
AMTR_s00004p00115360 [Amborella trichopoda]
Length = 1139
Score = 94.7 bits (234), Expect = 1e-17
Identities = 43/60 (71%), Positives = 51/60 (85%)
Frame = +2
Query: 365 AFEQFSDDEYDDDFQQQNACSSVANIDEWRWKLSLFLRNKEEKEIVSRDKSDKRDYEQIS 544
A EQFSDDEY+ +F+ A SSVANIDEW+WKLSL RN+EE+EI+SRDK D+RDYEQIS
Sbjct: 46 ALEQFSDDEYECEFENHKASSSVANIDEWKWKLSLLSRNQEEQEIISRDKRDRRDYEQIS 105
>ref|XP_006585701.1| PREDICTED: probable ATP-dependent RNA helicase DHX36-like [Glycine
max]
Length = 1161
Score = 94.7 bits (234), Expect = 1e-17
Identities = 47/78 (60%), Positives = 64/78 (82%), Gaps = 6/78 (7%)
Frame = +2
Query: 329 NLCNP-SLV--RHFSAF---EQFSDDEYDDDFQQQNACSSVANIDEWRWKLSLFLRNKEE 490
+LCN SL+ R FS++ EQFSDDEYD DF+ Q A S+VAN+DEW+WKLS+ LR++++
Sbjct: 53 SLCNAKSLITTRLFSSYYSLEQFSDDEYDCDFENQQASSTVANVDEWKWKLSMLLRSEKD 112
Query: 491 KEIVSRDKSDKRDYEQIS 544
+EIVSRD+ D+RDYEQI+
Sbjct: 113 QEIVSRDRKDRRDYEQIA 130
>gb|EOY19401.1| DEA(D/H)-box RNA helicase family protein isoform 4 [Theobroma
cacao]
Length = 962
Score = 94.0 bits (232), Expect = 2e-17
Identities = 49/91 (53%), Positives = 62/91 (68%), Gaps = 1/91 (1%)
Frame = +2
Query: 275 FLDVLKPLQNPRFKNSVLNLCNPSLVRHFS-AFEQFSDDEYDDDFQQQNACSSVANIDEW 451
F +L L + +S C+P R A EQFSDDEY+ DF+ A SSVANIDEW
Sbjct: 24 FDSLLFLLPSSSSSSSNARFCHPKRRRFCGYAAEQFSDDEYECDFESHKASSSVANIDEW 83
Query: 452 RWKLSLFLRNKEEKEIVSRDKSDKRDYEQIS 544
+WKLS+ LR++ ++EIVSRDK D+RDYEQIS
Sbjct: 84 KWKLSMLLRSENDQEIVSRDKRDRRDYEQIS 114
>gb|EOY19400.1| DEA(D/H)-box RNA helicase family protein isoform 3 [Theobroma
cacao]
Length = 1140
Score = 94.0 bits (232), Expect = 2e-17
Identities = 49/91 (53%), Positives = 62/91 (68%), Gaps = 1/91 (1%)
Frame = +2
Query: 275 FLDVLKPLQNPRFKNSVLNLCNPSLVRHFS-AFEQFSDDEYDDDFQQQNACSSVANIDEW 451
F +L L + +S C+P R A EQFSDDEY+ DF+ A SSVANIDEW
Sbjct: 24 FDSLLFLLPSSSSSSSNARFCHPKRRRFCGYAAEQFSDDEYECDFESHKASSSVANIDEW 83
Query: 452 RWKLSLFLRNKEEKEIVSRDKSDKRDYEQIS 544
+WKLS+ LR++ ++EIVSRDK D+RDYEQIS
Sbjct: 84 KWKLSMLLRSENDQEIVSRDKRDRRDYEQIS 114
>gb|EOY19399.1| DEA(D/H)-box RNA helicase family protein isoform 2 [Theobroma
cacao]
Length = 990
Score = 94.0 bits (232), Expect = 2e-17
Identities = 49/91 (53%), Positives = 62/91 (68%), Gaps = 1/91 (1%)
Frame = +2
Query: 275 FLDVLKPLQNPRFKNSVLNLCNPSLVRHFS-AFEQFSDDEYDDDFQQQNACSSVANIDEW 451
F +L L + +S C+P R A EQFSDDEY+ DF+ A SSVANIDEW
Sbjct: 24 FDSLLFLLPSSSSSSSNARFCHPKRRRFCGYAAEQFSDDEYECDFESHKASSSVANIDEW 83
Query: 452 RWKLSLFLRNKEEKEIVSRDKSDKRDYEQIS 544
+WKLS+ LR++ ++EIVSRDK D+RDYEQIS
Sbjct: 84 KWKLSMLLRSENDQEIVSRDKRDRRDYEQIS 114
>gb|EOY19398.1| DEA(D/H)-box RNA helicase family protein isoform 1 [Theobroma
cacao]
Length = 1142
Score = 94.0 bits (232), Expect = 2e-17
Identities = 49/91 (53%), Positives = 62/91 (68%), Gaps = 1/91 (1%)
Frame = +2
Query: 275 FLDVLKPLQNPRFKNSVLNLCNPSLVRHFS-AFEQFSDDEYDDDFQQQNACSSVANIDEW 451
F +L L + +S C+P R A EQFSDDEY+ DF+ A SSVANIDEW
Sbjct: 24 FDSLLFLLPSSSSSSSNARFCHPKRRRFCGYAAEQFSDDEYECDFESHKASSSVANIDEW 83
Query: 452 RWKLSLFLRNKEEKEIVSRDKSDKRDYEQIS 544
+WKLS+ LR++ ++EIVSRDK D+RDYEQIS
Sbjct: 84 KWKLSMLLRSENDQEIVSRDKRDRRDYEQIS 114
>gb|ESW05506.1| hypothetical protein PHAVU_011G1853001g, partial [Phaseolus
vulgaris]
Length = 491
Score = 93.6 bits (231), Expect = 3e-17
Identities = 50/112 (44%), Positives = 73/112 (65%), Gaps = 6/112 (5%)
Frame = +2
Query: 227 LKLRGHGIRFLGSSHSFLDVLKPLQNPRFK---NSVLNLCNPSLVRHFSAF---EQFSDD 388
L+L H + SS S P F+ +S+ N + + R FS++ EQFSDD
Sbjct: 18 LQLHHHTCHCVASSSS-----SPTSTSLFRFLPSSIRNAKSVAATRLFSSYYSVEQFSDD 72
Query: 389 EYDDDFQQQNACSSVANIDEWRWKLSLFLRNKEEKEIVSRDKSDKRDYEQIS 544
EY+ DF+ Q S+VAN+DEW+WKLS+ LR+++++EIVSRD+ D+RDYEQI+
Sbjct: 73 EYECDFENQQVSSTVANVDEWKWKLSMLLRSEKDQEIVSRDRKDRRDYEQIA 124
>ref|XP_004228918.1| PREDICTED: probable ATP-dependent RNA helicase DHX36-like [Solanum
lycopersicum]
Length = 1136
Score = 93.6 bits (231), Expect = 3e-17
Identities = 42/61 (68%), Positives = 52/61 (85%)
Frame = +2
Query: 362 SAFEQFSDDEYDDDFQQQNACSSVANIDEWRWKLSLFLRNKEEKEIVSRDKSDKRDYEQI 541
+A EQFSDDEY+ D++ A SSVAN+DEW+WKLSL LRN+++ EIVSRDK D+RDYEQI
Sbjct: 48 AALEQFSDDEYECDYENHPASSSVANVDEWKWKLSLLLRNEKDHEIVSRDKRDRRDYEQI 107
Query: 542 S 544
S
Sbjct: 108 S 108
>ref|XP_006348421.1| PREDICTED: probable ATP-dependent RNA helicase DHX36-like [Solanum
tuberosum]
Length = 1164
Score = 92.4 bits (228), Expect = 6e-17
Identities = 41/61 (67%), Positives = 53/61 (86%)
Frame = +2
Query: 362 SAFEQFSDDEYDDDFQQQNACSSVANIDEWRWKLSLFLRNKEEKEIVSRDKSDKRDYEQI 541
+A EQFSDDEY+ D++ A SSVAN+DEW+WKLSL LRN++++EIVSRDK D+RD+EQI
Sbjct: 76 AALEQFSDDEYECDYESHPASSSVANVDEWKWKLSLLLRNEKDQEIVSRDKRDRRDHEQI 135
Query: 542 S 544
S
Sbjct: 136 S 136
>ref|XP_004511172.1| PREDICTED: probable ATP-dependent RNA helicase DHX36-like [Cicer
arietinum]
Length = 1149
Score = 92.4 bits (228), Expect = 6e-17
Identities = 42/67 (62%), Positives = 55/67 (82%), Gaps = 3/67 (4%)
Frame = +2
Query: 353 RHFSAF---EQFSDDEYDDDFQQQNACSSVANIDEWRWKLSLFLRNKEEKEIVSRDKSDK 523
R FS + EQFSDDEY+ DF+ A S+VAN+DEW+WKLS+ LRN++++EIVSRDK D+
Sbjct: 52 RFFSGYYNLEQFSDDEYECDFENHQASSTVANVDEWKWKLSMLLRNEKDQEIVSRDKRDR 111
Query: 524 RDYEQIS 544
RDYEQI+
Sbjct: 112 RDYEQIA 118
>ref|XP_002310975.2| hypothetical protein POPTR_0008s01470g [Populus trichocarpa]
gi|550332163|gb|EEE88342.2| hypothetical protein
POPTR_0008s01470g [Populus trichocarpa]
Length = 1154
Score = 92.0 bits (227), Expect = 8e-17
Identities = 41/60 (68%), Positives = 51/60 (85%)
Frame = +2
Query: 365 AFEQFSDDEYDDDFQQQNACSSVANIDEWRWKLSLFLRNKEEKEIVSRDKSDKRDYEQIS 544
A EQFSDDEY+ DF+ A SSVAN+DEW+WKLSL LR++ ++EIVSRD+ D+RDYEQIS
Sbjct: 64 AVEQFSDDEYECDFENHKASSSVANVDEWKWKLSLLLRSETDQEIVSRDRKDRRDYEQIS 123
>gb|EXB97687.1| putative ATP-dependent RNA helicase DHX36 [Morus notabilis]
Length = 761
Score = 91.3 bits (225), Expect = 1e-16
Identities = 44/60 (73%), Positives = 51/60 (85%)
Frame = +2
Query: 365 AFEQFSDDEYDDDFQQQNACSSVANIDEWRWKLSLFLRNKEEKEIVSRDKSDKRDYEQIS 544
A EQFSDDEYDD + A SSVANIDEW+WKLSL LRN++++EIVSRDK D+RDYEQIS
Sbjct: 71 AAEQFSDDEYDD-IENHQASSSVANIDEWKWKLSLLLRNEKDQEIVSRDKRDRRDYEQIS 129
>ref|XP_002316463.2| hypothetical protein POPTR_0010s25230g [Populus trichocarpa]
gi|550330571|gb|EEF02634.2| hypothetical protein
POPTR_0010s25230g [Populus trichocarpa]
Length = 1159
Score = 90.9 bits (224), Expect = 2e-16
Identities = 40/60 (66%), Positives = 51/60 (85%)
Frame = +2
Query: 365 AFEQFSDDEYDDDFQQQNACSSVANIDEWRWKLSLFLRNKEEKEIVSRDKSDKRDYEQIS 544
A EQFSDDEY+ DF+ A SSVAN+DEW+WKLSL LR++ ++EIVS+D+ D+RDYEQIS
Sbjct: 65 AVEQFSDDEYECDFESHKASSSVANVDEWKWKLSLLLRSETDQEIVSKDRKDRRDYEQIS 124
>ref|XP_006398944.1| hypothetical protein EUTSA_v10012492mg [Eutrema salsugineum]
gi|557100034|gb|ESQ40397.1| hypothetical protein
EUTSA_v10012492mg [Eutrema salsugineum]
Length = 1161
Score = 90.5 bits (223), Expect = 2e-16
Identities = 45/78 (57%), Positives = 57/78 (73%), Gaps = 2/78 (2%)
Frame = +2
Query: 317 NSVLNLCNPSLVRHFSAF--EQFSDDEYDDDFQQQNACSSVANIDEWRWKLSLFLRNKEE 490
+SV L P + R F + EQFSDDEY+ +F++ A SSVAN+DEW+WKL + L N E
Sbjct: 52 DSVTGLFYP-ICRRFIGYTAEQFSDDEYECEFEEHKASSSVANVDEWKWKLGILLANDSE 110
Query: 491 KEIVSRDKSDKRDYEQIS 544
+EIVSRDK D+RDYEQIS
Sbjct: 111 REIVSRDKRDRRDYEQIS 128
>gb|EMT15182.1| Putative ATP-dependent RNA helicase DHX36 [Aegilops tauschii]
Length = 950
Score = 89.7 bits (221), Expect = 4e-16
Identities = 39/60 (65%), Positives = 49/60 (81%)
Frame = +2
Query: 365 AFEQFSDDEYDDDFQQQNACSSVANIDEWRWKLSLFLRNKEEKEIVSRDKSDKRDYEQIS 544
A EQFSDDEYD +++ SSVANIDEWRWKLS+ RN EE+EI+SRD+ D+RDY+QI+
Sbjct: 56 AVEQFSDDEYDHEYEDHRPSSSVANIDEWRWKLSMLQRNAEEQEIISRDRRDRRDYDQIA 115
>gb|EMS54496.1| putative ATP-dependent RNA helicase DHX36 [Triticum urartu]
Length = 1064
Score = 89.7 bits (221), Expect = 4e-16
Identities = 39/60 (65%), Positives = 49/60 (81%)
Frame = +2
Query: 365 AFEQFSDDEYDDDFQQQNACSSVANIDEWRWKLSLFLRNKEEKEIVSRDKSDKRDYEQIS 544
A EQFSDDEYD +++ SSVANIDEWRWKLS+ RN EE+EI+SRD+ D+RDY+QI+
Sbjct: 54 AVEQFSDDEYDHEYEDHRPSSSVANIDEWRWKLSMLQRNAEEQEIISRDRRDRRDYDQIA 113