BLASTX nr result

ID: Ephedra25_contig00026276 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra25_contig00026276
         (510 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAC96080.1| alpha-expansin precursor [Nicotiana tabacum]            60   4e-07
ref|XP_006355116.1| PREDICTED: expansin-A15-like [Solanum tubero...    56   4e-06
ref|XP_004238818.1| PREDICTED: expansin-A1 [Solanum lycopersicum]      56   4e-06
emb|CAD90261.1| expansin12 [Solanum lycopersicum]                      56   4e-06
gb|AAW28563.1| Alpha-expansin 1 precursor , putative [Solanum de...    56   4e-06
gb|AAU90318.1| Alpha-expansin 1 precursor , putative [Solanum de...    56   4e-06

>gb|AAC96080.1| alpha-expansin precursor [Nicotiana tabacum]
          Length = 249

 Score = 59.7 bits (143), Expect = 4e-07
 Identities = 38/90 (42%), Positives = 52/90 (57%), Gaps = 9/90 (10%)
 Frame = -2

Query: 404 FTISGDDKETEVLITNLGGGGNVDAVRATWPGVTGWKEMTRSSTKGGQVW---------T 252
           FTI+G      VL+TN+GGGG+V AV A     TGW+ M+R+    GQ W         T
Sbjct: 159 FTINGHAYFNLVLVTNVGGGGDVHAV-AVKGSRTGWQPMSRN---WGQNWQNNNYLNGQT 214

Query: 251 ITFELLTGDGRQLIASAVIP*IWASLHQFT 162
           ++F++ TGDGR LI+  V P  W+  H +T
Sbjct: 215 LSFKVTTGDGRSLISYNVAPAHWSFGHTYT 244


>ref|XP_006355116.1| PREDICTED: expansin-A15-like [Solanum tuberosum]
          Length = 249

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 36/90 (40%), Positives = 51/90 (56%), Gaps = 9/90 (10%)
 Frame = -2

Query: 404 FTISGDDKETEVLITNLGGGGNVDAVRATWPGVTGWKEMTRSSTKGGQVW---------T 252
           FTI+G      VL+TN+GGGG+V +V A     TGW+ M+R+    GQ W         T
Sbjct: 159 FTINGHSYFNLVLVTNVGGGGDVHSV-AVKGSRTGWQPMSRN---WGQNWQNNNNLNGQT 214

Query: 251 ITFELLTGDGRQLIASAVIP*IWASLHQFT 162
           ++F++ TGDGR LI+  V P  W+    +T
Sbjct: 215 LSFKVTTGDGRSLISYNVAPAHWSFGQTYT 244


>ref|XP_004238818.1| PREDICTED: expansin-A1 [Solanum lycopersicum]
          Length = 249

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 36/90 (40%), Positives = 51/90 (56%), Gaps = 9/90 (10%)
 Frame = -2

Query: 404 FTISGDDKETEVLITNLGGGGNVDAVRATWPGVTGWKEMTRSSTKGGQVW---------T 252
           FTI+G      VL+TN+GGGG+V +V A     TGW+ M+R+    GQ W         T
Sbjct: 159 FTINGHSYFNLVLVTNVGGGGDVHSV-AVKGSRTGWQPMSRN---WGQNWQNNNNLNGQT 214

Query: 251 ITFELLTGDGRQLIASAVIP*IWASLHQFT 162
           ++F++ TGDGR LI+  V P  W+    +T
Sbjct: 215 LSFKVTTGDGRSLISYNVAPAHWSFGQTYT 244


>emb|CAD90261.1| expansin12 [Solanum lycopersicum]
          Length = 233

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 36/90 (40%), Positives = 51/90 (56%), Gaps = 9/90 (10%)
 Frame = -2

Query: 404 FTISGDDKETEVLITNLGGGGNVDAVRATWPGVTGWKEMTRSSTKGGQVW---------T 252
           FTI+G      VL+TN+GGGG+V +V A     TGW+ M+R+    GQ W         T
Sbjct: 143 FTINGHSYFNLVLVTNVGGGGDVHSV-AVKGSRTGWQPMSRN---WGQNWQNNNDLNGQT 198

Query: 251 ITFELLTGDGRQLIASAVIP*IWASLHQFT 162
           ++F++ TGDGR LI+  V P  W+    +T
Sbjct: 199 LSFKVTTGDGRSLISYNVAPAHWSFGQTYT 228


>gb|AAW28563.1| Alpha-expansin 1 precursor , putative [Solanum demissum]
          Length = 249

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 36/90 (40%), Positives = 51/90 (56%), Gaps = 9/90 (10%)
 Frame = -2

Query: 404 FTISGDDKETEVLITNLGGGGNVDAVRATWPGVTGWKEMTRSSTKGGQVW---------T 252
           FTI+G      VL+TN+GGGG+V +V A     TGW+ M+R+    GQ W         T
Sbjct: 159 FTINGHSYFNLVLVTNVGGGGDVHSV-AVKGSRTGWQPMSRN---WGQNWQNNNNLNGQT 214

Query: 251 ITFELLTGDGRQLIASAVIP*IWASLHQFT 162
           ++F++ TGDGR LI+  V P  W+    +T
Sbjct: 215 LSFKVTTGDGRSLISYNVAPAHWSFGQTYT 244


>gb|AAU90318.1| Alpha-expansin 1 precursor , putative [Solanum demissum]
          Length = 249

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 36/90 (40%), Positives = 51/90 (56%), Gaps = 9/90 (10%)
 Frame = -2

Query: 404 FTISGDDKETEVLITNLGGGGNVDAVRATWPGVTGWKEMTRSSTKGGQVW---------T 252
           FTI+G      VL+TN+GGGG+V +V A     TGW+ M+R+    GQ W         T
Sbjct: 159 FTINGHSYFNLVLVTNVGGGGDVHSV-AVKGSRTGWQPMSRN---WGQNWQSNNNLNGQT 214

Query: 251 ITFELLTGDGRQLIASAVIP*IWASLHQFT 162
           ++F++ TGDGR LI+  V P  W+    +T
Sbjct: 215 LSFKVTTGDGRSLISYNVAPAHWSFGQTYT 244


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