BLASTX nr result

ID: Ephedra25_contig00026265 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra25_contig00026265
         (595 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002533886.1| conserved hypothetical protein [Ricinus comm...    65   1e-08
ref|XP_006427928.1| hypothetical protein CICLE_v10025563mg [Citr...    59   1e-06
ref|XP_006427927.1| hypothetical protein CICLE_v10025563mg [Citr...    59   1e-06
ref|XP_006854485.1| hypothetical protein AMTR_s00175p00030950 [A...    57   3e-06

>ref|XP_002533886.1| conserved hypothetical protein [Ricinus communis]
           gi|223526163|gb|EEF28497.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 357

 Score = 65.5 bits (158), Expect = 1e-08
 Identities = 41/106 (38%), Positives = 58/106 (54%), Gaps = 1/106 (0%)
 Frame = +2

Query: 11  KWTLNDTTLTAGDVHEILGSPSLFRLRYGWLSSHLQNLSSKMCEQQIPCLPDTMALQNSP 190
           +WTLND  L+AGD++  +GSPS+FRLRYGW++   +N SS++    IP          S 
Sbjct: 59  RWTLNDVGLSAGDIYAAVGSPSIFRLRYGWVTD-CENKSSELQSTLIP----------SE 107

Query: 191 GCLRGQ-LQKICSINGSRNKTKRGKSRSFISCGANSNLQPMKQRKP 325
            CLR + +QK+CS N   N   +GK           N  P ++ KP
Sbjct: 108 ACLRHEGIQKVCS-NNVENINGKGK----------QNEDPSEELKP 142


>ref|XP_006427928.1| hypothetical protein CICLE_v10025563mg [Citrus clementina]
           gi|568820004|ref|XP_006464523.1| PREDICTED: TSL-kinase
           interacting protein 1-like isoform X1 [Citrus sinensis]
           gi|568820006|ref|XP_006464524.1| PREDICTED: TSL-kinase
           interacting protein 1-like isoform X2 [Citrus sinensis]
           gi|568820008|ref|XP_006464525.1| PREDICTED: TSL-kinase
           interacting protein 1-like isoform X3 [Citrus sinensis]
           gi|568820010|ref|XP_006464526.1| PREDICTED: TSL-kinase
           interacting protein 1-like isoform X4 [Citrus sinensis]
           gi|557529918|gb|ESR41168.1| hypothetical protein
           CICLE_v10025563mg [Citrus clementina]
          Length = 462

 Score = 58.9 bits (141), Expect = 1e-06
 Identities = 37/106 (34%), Positives = 57/106 (53%), Gaps = 8/106 (7%)
 Frame = +2

Query: 2   ACQKWTLNDTTLTAGDVHEILGSPSLFRLRYGWLSSHLQNLSSKMCEQQIPCLPDTMALQ 181
           A  +WT+ND  ++AGDV+  +G+P++FRLRYGW SS+L+         +   +P T    
Sbjct: 164 ASYRWTMNDNDISAGDVYAAIGNPTVFRLRYGW-SSNLKT--------ETGGVPSTTT-- 212

Query: 182 NSPGCLRGQ-LQKICSINGSRNK-------TKRGKSRSFISCGANS 295
           +  GCL+ Q LQ+ CS N              RG+ + FI  G+ +
Sbjct: 213 SLEGCLKAQGLQRSCSTNVENTNGIVKQIDATRGELKPFIESGSTN 258


>ref|XP_006427927.1| hypothetical protein CICLE_v10025563mg [Citrus clementina]
           gi|568820012|ref|XP_006464527.1| PREDICTED: TSL-kinase
           interacting protein 1-like isoform X5 [Citrus sinensis]
           gi|557529917|gb|ESR41167.1| hypothetical protein
           CICLE_v10025563mg [Citrus clementina]
          Length = 417

 Score = 58.9 bits (141), Expect = 1e-06
 Identities = 37/106 (34%), Positives = 57/106 (53%), Gaps = 8/106 (7%)
 Frame = +2

Query: 2   ACQKWTLNDTTLTAGDVHEILGSPSLFRLRYGWLSSHLQNLSSKMCEQQIPCLPDTMALQ 181
           A  +WT+ND  ++AGDV+  +G+P++FRLRYGW SS+L+         +   +P T    
Sbjct: 119 ASYRWTMNDNDISAGDVYAAIGNPTVFRLRYGW-SSNLKT--------ETGGVPSTTT-- 167

Query: 182 NSPGCLRGQ-LQKICSINGSRNK-------TKRGKSRSFISCGANS 295
           +  GCL+ Q LQ+ CS N              RG+ + FI  G+ +
Sbjct: 168 SLEGCLKAQGLQRSCSTNVENTNGIVKQIDATRGELKPFIESGSTN 213


>ref|XP_006854485.1| hypothetical protein AMTR_s00175p00030950 [Amborella trichopoda]
           gi|548858163|gb|ERN15952.1| hypothetical protein
           AMTR_s00175p00030950 [Amborella trichopoda]
          Length = 759

 Score = 57.4 bits (137), Expect = 3e-06
 Identities = 29/69 (42%), Positives = 41/69 (59%), Gaps = 18/69 (26%)
 Frame = +2

Query: 2   ACQKWTLNDTTLTAGDVHEILGSPSLFRLRYGWLS--------SH----------LQNLS 127
           +CQ+WT+ +TTL A D++ ILG P LFRLRYGW S        SH          +Q+++
Sbjct: 376 SCQRWTMKETTLCAADLYAILGYPELFRLRYGWFSDTGTFGDTSHSFDDCLRSGDIQDMN 435

Query: 128 SKMCEQQIP 154
            K+ E Q+P
Sbjct: 436 DKIDEAQLP 444


Top