BLASTX nr result

ID: Ephedra25_contig00026096 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra25_contig00026096
         (792 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EXB22639.1| Fanconi anemia group M protein [Morus notabilis]        64   6e-08
ref|XP_006858279.1| hypothetical protein AMTR_s00064p00033720 [A...    58   3e-06

>gb|EXB22639.1| Fanconi anemia group M protein [Morus notabilis]
          Length = 1289

 Score = 63.9 bits (154), Expect = 6e-08
 Identities = 63/222 (28%), Positives = 94/222 (42%), Gaps = 11/222 (4%)
 Frame = -3

Query: 703  SPLT--IKNTCTQDWRLSIDETQQSGKKQRKFKRLRKVKEDAQKPSSKKNTKKDQHNTDS 530
            SP T     +C+++W LS+ +  +S K+ RKFKRLRKV +D       KN    +    S
Sbjct: 979  SPFTDLTNESCSRNWCLSMGDQSESVKRTRKFKRLRKVGDDG------KNENLQREKDSS 1032

Query: 529  LVYRKQRISTDRGIPKRTNLPLIXXXXXXXXXXXXXXXXXXXXXNGSAEETDDSFIDDE- 353
            L  R    ++ RG  K+ N  ++                     +     + DSFIDD  
Sbjct: 1033 LKPR----ASGRG-RKKPNNDMVRAFIDEEAEASTDCDTSEDEEDDQNNNSHDSFIDDRT 1087

Query: 352  ---IELSTSESDKVDMLAVYRRSLLTQSPFDRNIHASVCIENMRDDGNEEQEPPISVDP- 185
               I  + S +   DM+A+YRRSLL+QSP  R              G++    P S+ P 
Sbjct: 1088 CPTIAATQSATSGTDMMAIYRRSLLSQSPMPR-----------LPSGSDTLTTPNSMAPT 1136

Query: 184  --PFERVCSSG--SETMETPYHASFSEDVKCESSSKDLNISY 71
                ER   SG  S  ++TP   S ++      S     I++
Sbjct: 1137 PRTSERGSGSGKASFCLQTPLTDSTNQSKNSRDSKPSFRINH 1178


>ref|XP_006858279.1| hypothetical protein AMTR_s00064p00033720 [Amborella trichopoda]
            gi|548862386|gb|ERN19746.1| hypothetical protein
            AMTR_s00064p00033720 [Amborella trichopoda]
          Length = 1396

 Score = 58.2 bits (139), Expect = 3e-06
 Identities = 43/153 (28%), Positives = 69/153 (45%), Gaps = 11/153 (7%)
 Frame = -3

Query: 685  NTCTQDWRLSIDETQQSGKKQRKFKRLRKVKEDAQKPSSKKNTKKDQHNTDSLVYRKQRI 506
            N+C++DW+LS      S +K  K KRLRK  +  ++  S+ + KK     D +       
Sbjct: 1042 NSCSKDWQLSSGAASNSVQKPCKLKRLRKCADVNERRHSQASRKKH----DGIRANLYNA 1097

Query: 505  STDRGIPKRTNLPLIXXXXXXXXXXXXXXXXXXXXXNGSAEETDD-------SFIDDEIE 347
             T   +P+ T++                             E ++       SFIDD +E
Sbjct: 1098 FTQADVPEMTHIDQWSSKAHPKDFIDEEAEVSSDTEVSEDNEDENENYGESNSFIDDSVE 1157

Query: 346  LSTS----ESDKVDMLAVYRRSLLTQSPFDRNI 260
             S +    E+ + DM+A+YRRSLL+QSP +R +
Sbjct: 1158 PSAAYLLGETGERDMMAIYRRSLLSQSPRERQL 1190


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