BLASTX nr result
ID: Ephedra25_contig00026078
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra25_contig00026078
(826 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ABK26627.1| unknown [Picea sitchensis] 95 3e-17
gb|ADE76674.1| unknown [Picea sitchensis] 90 8e-16
gb|ADE77447.1| unknown [Picea sitchensis] 88 4e-15
ref|XP_004237873.1| PREDICTED: uncharacterized protein LOC101268... 86 1e-14
ref|XP_006354041.1| PREDICTED: uncharacterized protein LOC102586... 86 2e-14
ref|XP_002893155.1| hypothetical protein ARALYDRAFT_313019 [Arab... 83 1e-13
gb|AAF80646.1|AC012190_2 Contains similarity to F28O16.19 a puta... 79 1e-12
ref|NP_173539.1| transcription termination factor family protein... 79 1e-12
ref|XP_006391863.1| hypothetical protein EUTSA_v10023457mg [Eutr... 76 1e-11
ref|XP_006447114.1| hypothetical protein CICLE_v10015532mg [Citr... 76 2e-11
ref|XP_006306049.1| hypothetical protein CARUB_v10011358mg [Caps... 75 2e-11
gb|EMJ12443.1| hypothetical protein PRUPE_ppa015858mg, partial [... 75 2e-11
ref|NP_176389.1| mitochondrial transcription termination factor ... 75 2e-11
ref|XP_002888053.1| hypothetical protein ARALYDRAFT_475137 [Arab... 75 3e-11
ref|XP_002304896.2| hypothetical protein POPTR_0004s01290g [Popu... 75 4e-11
ref|XP_002271898.1| PREDICTED: uncharacterized protein LOC100258... 75 4e-11
emb|CAN68941.1| hypothetical protein VITISV_028996 [Vitis vinifera] 74 6e-11
ref|XP_002269678.2| PREDICTED: uncharacterized protein LOC100245... 73 1e-10
ref|XP_002271836.1| PREDICTED: uncharacterized protein LOC100241... 73 1e-10
ref|XP_006597741.1| PREDICTED: uncharacterized protein LOC102666... 73 1e-10
>gb|ABK26627.1| unknown [Picea sitchensis]
Length = 282
Score = 94.7 bits (234), Expect = 3e-17
Identities = 55/181 (30%), Positives = 103/181 (56%), Gaps = 11/181 (6%)
Frame = +2
Query: 179 SSFLVDGLGLSQSQLSIVQRLYPTMF--RPTKRAQQAIEIFREYGFTDLQIKNVIIKCPS 352
S FL++ G+ QS+LS + + P++ + T AQQA++ R+ GFT+ Q++ I PS
Sbjct: 65 SEFLLNECGMCQSELSTILKRRPSLVATKSTHTAQQAVQFLRDSGFTEHQVRKTITSNPS 124
Query: 353 VLSYRTDERLRPKLEILKSIGFSTQGLAHAVLRAPRTLAV---KNLDSSVEYFKCFFRGS 523
+L++ D RL+PK+E +K++G + Q + + R L K L ++++Y + F
Sbjct: 125 ILTFNADRRLKPKIEFMKTLGLTAQDFGNVLSYGFRLLTCSLEKTLRTNIQYLQNLFGSE 184
Query: 524 TNLHKAIKKSPH-LLQSN-IDTANKQITLLREWGFSEEWIFYIICKYPMIL----HRCEK 685
N+ K +PH LL+SN ++ ++ L +G E+ I ++ ++P+IL H+ +K
Sbjct: 185 ANVSNVFKWAPHILLKSNGPESWENKLKHLTSFGLLEDEIMELVRRHPLILNTSMHKLQK 244
Query: 686 S 688
+
Sbjct: 245 N 245
>gb|ADE76674.1| unknown [Picea sitchensis]
Length = 335
Score = 90.1 bits (222), Expect = 8e-16
Identities = 62/235 (26%), Positives = 123/235 (52%), Gaps = 13/235 (5%)
Frame = +2
Query: 140 SAGSKKPCAFSW------FSSFLVDGLGLSQSQLSIVQRLYPTMFRP--TKRAQQAIEIF 295
+AG+ +P + S FL++ GL +SQLS + + P + R T AQQA+++
Sbjct: 44 TAGNDRPTGYPEAKNTCPISEFLLNECGLCESQLSGILKKRPHLVRTRSTHTAQQAVQLL 103
Query: 296 REYGFTDLQIKNVIIKCPSVLSYRTDERLRPKLEILKSIGFSTQGLAHAVLRAPRTLA-- 469
R+ GFT+ Q+ +I + PS+L+Y D +L+PK+E +K++G + + + + PR L+
Sbjct: 104 RDSGFTEDQVCKIITRNPSILTYNADRQLKPKIEFMKTLGLTAHEIGNVTCQGPRLLSHS 163
Query: 470 -VKNLDSSVEYFKCFFRGSTNLHKAIKKSPHLL-QSNI-DTANKQITLLREWGFSEEWIF 640
K + ++ Y + F ++ K +K+ P +L +N+ + ++ L +G E I
Sbjct: 164 IEKTVQPNILYLQNLFGSEADVSKVLKRVPGILVNTNMPERLRNKLKYLASFGIPENEIK 223
Query: 641 YIICKYPMILHRCEKSTRVRMEDLRRLGFADKPKSFGFLLVSCITQSLATIENKL 805
++ + P+IL+ + M+ + + A P F L+SC ++E+++
Sbjct: 224 DLVRRNPVILNVSMDKMQKNMDFI--IHTAGLPAKF---LLSCPLLPAFSLESRI 273
>gb|ADE77447.1| unknown [Picea sitchensis]
Length = 329
Score = 87.8 bits (216), Expect = 4e-15
Identities = 50/172 (29%), Positives = 94/172 (54%), Gaps = 7/172 (4%)
Frame = +2
Query: 179 SSFLVDGLGLSQSQLSIVQRLYPTMF--RPTKRAQQAIEIFREYGFTDLQIKNVIIKCPS 352
S FL+ GL QS L ++ R PT+ R A++ +++ R+ G T+ Q+ +II+ P+
Sbjct: 57 SEFLLKDCGLCQSDLPVIFRRNPTLLACRSAHTAREVVKLLRDSGCTEEQVSKIIIEHPT 116
Query: 353 VLSYRTDERLRPKLEILKSIGFSTQGLAHAVLRAPRTLAV---KNLDSSVEYFKCFFRGS 523
VL +TD +L+PK+E+ K+ G + + L + + + PR L K L +++Y + +
Sbjct: 117 VLCLKTDRQLKPKIELFKTSGITGKDLVNLISKFPRVLGSNLDKTLKPNIQYLQSMWESK 176
Query: 524 TNLHKAIKKSPHLL--QSNIDTANKQITLLREWGFSEEWIFYIICKYPMILH 673
++ KA +K+ HLL +++ L +G +E I ++ K P +L+
Sbjct: 177 ASVSKAFQKASHLLIYSDGPQIWERRMMHLASFGLLKEEIKELVWKNPQVLN 228
>ref|XP_004237873.1| PREDICTED: uncharacterized protein LOC101268097 [Solanum
lycopersicum]
Length = 375
Score = 86.3 bits (212), Expect = 1e-14
Identities = 71/263 (26%), Positives = 123/263 (46%), Gaps = 8/263 (3%)
Frame = +2
Query: 62 RLTKTLCXXXXXXXXELIDISNGMQISAGSKKPCAFSWFSSFLVDGLGLSQSQLSIVQRL 241
R+T+T + I N + S + LVD LG S+ + ++
Sbjct: 4 RITRTGIHANGVKNPLVFSIDNFRFVLHCSTSAAPTHYLVDLLVDSLGFSKEE-AVTTSS 62
Query: 242 YPTMFRPTKRAQQAIEIFREYGFTDLQIKNVIIKCPSVLSYRTDERLRPKLEILKSIGFS 421
+P+K Q ++ F++ F + QIKN++ K P VL D+ L+PKLEIL+ IG S
Sbjct: 63 KVIRLKPSKNPQFVVDFFQKNDFDNTQIKNIVSKSPKVLFSNVDKTLKPKLEILQEIGLS 122
Query: 422 TQGLAHAVLRAPRTLAVKNLDS----SVEYFKCFFRGSTNLHKAIKKSPHLLQSNI-DTA 586
L ++ + K LD+ S++Y + N+ K IKKS LL+ ++ T
Sbjct: 123 GTDLYKFIIENDLFFS-KGLDTFIRPSLDYLRNLLGSDENVVKIIKKSSWLLRCHVTKTI 181
Query: 587 NKQITLLREWGFSEEWIFYIICKYPMILHR---CEKSTRVRMEDLRRLGFADKPKSFGFL 757
+ LL + G S+E I I + P + R C K R+E + LG + ++F
Sbjct: 182 APNVLLLHDIGLSDEKIRKFILQNPKRITRNLGCLKDVIHRVE--KDLGIPRESRTFFNG 239
Query: 758 LVSCITQSLATIENKLNMFAALG 826
+ + +T +T+ K++++ + G
Sbjct: 240 IAAIVTFRQSTLAKKIDVYKSFG 262
>ref|XP_006354041.1| PREDICTED: uncharacterized protein LOC102586840 [Solanum tuberosum]
Length = 375
Score = 85.9 bits (211), Expect = 2e-14
Identities = 69/247 (27%), Positives = 118/247 (47%), Gaps = 8/247 (3%)
Frame = +2
Query: 110 LIDISNGMQISAGSKKPCAFSWFSSFLVDGLGLSQSQLSIVQRLYPTMFRPTKRAQQAIE 289
L I N + S + LVD LG S+ + ++ +P+K + ++
Sbjct: 20 LFSIDNFRFVLHCSNSAAPTQYLVDLLVDSLGFSKEE-AVTTSSKVIRLKPSKNPEFVVD 78
Query: 290 IFREYGFTDLQIKNVIIKCPSVLSYRTDERLRPKLEILKSIGFSTQGLAHAVLRAPRTLA 469
F++ F + QIKN+I K P VL D+ L+PKLEIL+ IG S L ++ +
Sbjct: 79 FFQKNDFDNNQIKNIISKSPKVLFSNVDKTLKPKLEILQEIGLSGTDLYKFIIENDLFFS 138
Query: 470 VKNLDS----SVEYFKCFFRGSTNLHKAIKKSPHLLQSNI-DTANKQITLLREWGFSEEW 634
K LD+ S++Y + N+ K IKKS LL+ ++ T + LL + G S+E
Sbjct: 139 -KGLDTFIRPSLDYLRNLLGSDENVVKIIKKSSWLLRCHVTKTIAPNVLLLHDIGLSDEK 197
Query: 635 IFYIICKYPMILHR---CEKSTRVRMEDLRRLGFADKPKSFGFLLVSCITQSLATIENKL 805
I I + P + R C K R+E + LG + ++F + + +T +T+ K+
Sbjct: 198 IRKFILQNPKRITRNLGCLKDVIHRVE--KDLGIPRESRTFFNGIAAIVTLRQSTLAKKI 255
Query: 806 NMFAALG 826
+++ + G
Sbjct: 256 DVYKSFG 262
>ref|XP_002893155.1| hypothetical protein ARALYDRAFT_313019 [Arabidopsis lyrata subsp.
lyrata] gi|297338997|gb|EFH69414.1| hypothetical protein
ARALYDRAFT_313019 [Arabidopsis lyrata subsp. lyrata]
Length = 1429
Score = 82.8 bits (203), Expect = 1e-13
Identities = 62/230 (26%), Positives = 102/230 (44%), Gaps = 4/230 (1%)
Frame = +2
Query: 149 SKKPCAFSWFSSFLVDGLGLSQSQLSIVQRLYPTMFRPTKRAQQAIEIFREYGFTDLQIK 328
++ C S+ S+LVD GLS R + +K+ + +F+++GFT QI
Sbjct: 1088 NQNQCLESFTVSYLVDSCGLSLESAKSNSRFVKLV--SSKKPDSVLALFKDHGFTTDQIT 1145
Query: 329 NVIIKCPSVLSYRTDERLRPKLEILKSIGFSTQGLAHAVLRAPRTLA---VKNLDSSVEY 499
NVI P VLS D+ + PKL SIGFST A + P+ L+ K + +
Sbjct: 1146 NVIKSFPRVLSLSPDDVILPKLMFFSSIGFSTSDTAKMISSCPKMLSHSLNKRMIPCYDA 1205
Query: 500 FKCFFRGSTNLHKAIKKSPHLLQSNI-DTANKQITLLREWGFSEEWIFYIICKYPMILHR 676
K N+ K +K+ I D + ++++ RE G ++ I +++ P+
Sbjct: 1206 LKSILVEEENIVKCLKRGYRCFSLKITDCVSPRVSICRELGVPDKSIKWLVQVSPITFFS 1265
Query: 677 CEKSTRVRMEDLRRLGFADKPKSFGFLLVSCITQSLATIENKLNMFAALG 826
E+ + + GF K F +V+ S AT+E K +F G
Sbjct: 1266 PERRFNELLNRVCSYGFDPKKAGFVHAMVAFDHTSEATMERKFELFQRFG 1315
>gb|AAF80646.1|AC012190_2 Contains similarity to F28O16.19 a putative translation initiation
factor IF-2 gi|6143896 from Arabidopsis thaliana
gb|AC010718. It is a member of Elongation factor Tu
family. ESTs gb|AI994592 and gb|T20793 come from thias
gene [Arabidopsis thaliana]
Length = 1552
Score = 79.3 bits (194), Expect = 1e-12
Identities = 61/243 (25%), Positives = 106/243 (43%), Gaps = 4/243 (1%)
Frame = +2
Query: 110 LIDISNGMQISAGSKKPCAFSWFSSFLVDGLGLSQSQLSIVQRLYPTMFRPTKRAQQAIE 289
L +S + +KPC S+ S+LVD GLS R + +K+ +
Sbjct: 1198 LCSVSQVKSENLEKQKPCLESFTVSYLVDSCGLSLESAKSNSRFVKLV--SSKKPDSVLA 1255
Query: 290 IFREYGFTDLQIKNVIIKCPSVLSYRTDERLRPKLEILKSIGFSTQGLAHAVLRAPRTLA 469
+F+++GFT+ QI +VI P VLS ++ + PKL SIGFST A + +P+ L+
Sbjct: 1256 LFKDHGFTNDQITSVIKSFPRVLSLSPEDVISPKLMFFSSIGFSTSDTAKMISSSPKMLS 1315
Query: 470 V---KNLDSSVEYFKCFFRGSTNLHKAIKKSPHLLQSNI-DTANKQITLLREWGFSEEWI 637
K L + K ++ K +K+ I + ++++ RE G ++ I
Sbjct: 1316 YSLHKRLIPCYDSLKSILVEEESVVKCLKRGIRCFSLKITHCVSLRVSICRELGVPDKSI 1375
Query: 638 FYIICKYPMILHRCEKSTRVRMEDLRRLGFADKPKSFGFLLVSCITQSLATIENKLNMFA 817
+++ P E+ + + GF K F +V+ S + +E K +F
Sbjct: 1376 KWLVQASPFTFFSRERRFNEVLNRVCSYGFDPKKAGFVHAMVAFDCTSESAMERKFKLFQ 1435
Query: 818 ALG 826
G
Sbjct: 1436 CFG 1438
>ref|NP_173539.1| transcription termination factor family protein [Arabidopsis
thaliana] gi|332191949|gb|AEE30070.1| transcription
termination factor family protein [Arabidopsis thaliana]
Length = 390
Score = 79.3 bits (194), Expect = 1e-12
Identities = 61/243 (25%), Positives = 106/243 (43%), Gaps = 4/243 (1%)
Frame = +2
Query: 110 LIDISNGMQISAGSKKPCAFSWFSSFLVDGLGLSQSQLSIVQRLYPTMFRPTKRAQQAIE 289
L +S + +KPC S+ S+LVD GLS R + +K+ +
Sbjct: 36 LCSVSQVKSENLEKQKPCLESFTVSYLVDSCGLSLESAKSNSRFVKLV--SSKKPDSVLA 93
Query: 290 IFREYGFTDLQIKNVIIKCPSVLSYRTDERLRPKLEILKSIGFSTQGLAHAVLRAPRTLA 469
+F+++GFT+ QI +VI P VLS ++ + PKL SIGFST A + +P+ L+
Sbjct: 94 LFKDHGFTNDQITSVIKSFPRVLSLSPEDVISPKLMFFSSIGFSTSDTAKMISSSPKMLS 153
Query: 470 V---KNLDSSVEYFKCFFRGSTNLHKAIKKSPHLLQSNI-DTANKQITLLREWGFSEEWI 637
K L + K ++ K +K+ I + ++++ RE G ++ I
Sbjct: 154 YSLHKRLIPCYDSLKSILVEEESVVKCLKRGIRCFSLKITHCVSLRVSICRELGVPDKSI 213
Query: 638 FYIICKYPMILHRCEKSTRVRMEDLRRLGFADKPKSFGFLLVSCITQSLATIENKLNMFA 817
+++ P E+ + + GF K F +V+ S + +E K +F
Sbjct: 214 KWLVQASPFTFFSRERRFNEVLNRVCSYGFDPKKAGFVHAMVAFDCTSESAMERKFKLFQ 273
Query: 818 ALG 826
G
Sbjct: 274 CFG 276
>ref|XP_006391863.1| hypothetical protein EUTSA_v10023457mg [Eutrema salsugineum]
gi|557088369|gb|ESQ29149.1| hypothetical protein
EUTSA_v10023457mg [Eutrema salsugineum]
Length = 459
Score = 76.3 bits (186), Expect = 1e-11
Identities = 69/224 (30%), Positives = 105/224 (46%), Gaps = 9/224 (4%)
Frame = +2
Query: 182 SFLVDGLGLSQSQLSIVQRLYPTMFRPTKRAQQAIEIFREYGFTDLQIKNVIIKCPSVLS 361
S+LVD LGL+ + R F ++ + +FR YGF D QI N+I P +L
Sbjct: 60 SYLVDSLGLTAKLAKSISR--KVSFEDSENPDSVLSLFRSYGFADSQISNIITGYPLLLI 117
Query: 362 YRTDERLRPKLEILKSIGFSTQGLAHAVLRAPRTLAVKNLDSSVEYFKCFFRGSTNLHKA 541
+ + PKL+ L+S G ST L + + P+ L D S + F + K+
Sbjct: 118 ADAETSIGPKLQSLQSRGASTSELTEILSKVPKIL---GKDRSFSVYYDFVKEIVEADKS 174
Query: 542 IK--KSPHLLQSNIDTANK--QITLLREWGFSEEWIF-YIICKYPMIL--HRCEKSTRVR 700
K K H L NK ++ LRE G ++ +F ++ K P I R E+S +
Sbjct: 175 SKYVKLCHSLPQGSKQENKLRNVSALRELGMPQKLLFSMLVSKCPHICGKERFEESLKKV 234
Query: 701 MEDLRRLGFADKPKSFGFLLVSCITQSL--ATIENKLNMFAALG 826
+E +GF P + FL I Q+L TIE K+N++ +LG
Sbjct: 235 VE----MGF--DPTTPKFLEALRIVQALKEETIEEKVNVYKSLG 272
>ref|XP_006447114.1| hypothetical protein CICLE_v10015532mg [Citrus clementina]
gi|568831542|ref|XP_006470021.1| PREDICTED:
uncharacterized protein LOC102622219 [Citrus sinensis]
gi|557549725|gb|ESR60354.1| hypothetical protein
CICLE_v10015532mg [Citrus clementina]
Length = 392
Score = 75.9 bits (185), Expect = 2e-11
Identities = 63/221 (28%), Positives = 110/221 (49%), Gaps = 6/221 (2%)
Frame = +2
Query: 182 SFLVDGLGLSQSQLSIVQRLYPTMFRPTKRAQQAIEIFREYGFTDLQIKNVIIKCPSVLS 361
SFL GLS + V +L + T++ +I++ GFT QI +I K P +LS
Sbjct: 48 SFLTHSCGLSLEKAISVSKL--VKIQDTEKPNSSIQLLTSRGFTKPQIATLISKYPRILS 105
Query: 362 YRTDERLRPKLEILKSIGFSTQGLAHAVLRAPRTLAVKNLDSSV----EYFKCFFRGSTN 529
+ ++ L+PK+E L+S+G S LA + P L+ ++L++ + ++ K F+ + N
Sbjct: 106 HDPEKVLKPKIEYLESLGISGPDLAKILCPYPELLS-RSLENHIIPTFDFLKGVFQANGN 164
Query: 530 LHKAIKKSPHLLQSNID-TANKQITLLREWGFSEEWIF-YIICKYPMILHRCEKSTRVRM 703
L A+K+S ++ S+I + LR G E I I+ + P ++ R E V +
Sbjct: 165 LVYALKQSIRVVNSDIQKRVVPNMNTLRAHGVPEPHIARLIMLQPPSLVLRAELFKNV-V 223
Query: 704 EDLRRLGFADKPKSFGFLLVSCITQSLATIENKLNMFAALG 826
+ ++ +GF KSF + S S AT + K + + G
Sbjct: 224 DVIKEMGFEPSSKSFILAVRSMAMSSKATWQRKKEILISFG 264
>ref|XP_006306049.1| hypothetical protein CARUB_v10011358mg [Capsella rubella]
gi|482574760|gb|EOA38947.1| hypothetical protein
CARUB_v10011358mg [Capsella rubella]
Length = 398
Score = 75.5 bits (184), Expect = 2e-11
Identities = 57/226 (25%), Positives = 98/226 (43%), Gaps = 4/226 (1%)
Frame = +2
Query: 161 CAFSWFSSFLVDGLGLSQSQLSIVQRLYPTMFRPTKRAQQAIEIFREYGFTDLQIKNVII 340
C S+ S+LV+ GLS R + +++ + +F+++GFT+ QI VI
Sbjct: 61 CLESFTVSYLVNSCGLSLESAKSNSRFVKLV--SSEKPDSVLALFKDHGFTNDQITTVIK 118
Query: 341 KCPSVLSYRTDERLRPKLEILKSIGFSTQGLAHAVLRAPRTLAV---KNLDSSVEYFKCF 511
P +LS + + PKL SIGFST A + P+TL+ K L + K
Sbjct: 119 SFPRILSLSPEAVISPKLMFFSSIGFSTSDTAKLISSCPKTLSFSLEKRLIPCYDSLKSI 178
Query: 512 FRGSTNLHKAIKKSPHLLQSNI-DTANKQITLLREWGFSEEWIFYIICKYPMILHRCEKS 688
N+ K +K+ I + +I++ RE G ++ I +++ P E+
Sbjct: 179 LLEEENVVKCLKRGYRCFSLKIAHCVSPRISIFRELGVPDKSIKWLVQASPFTFFSSERR 238
Query: 689 TRVRMEDLRRLGFADKPKSFGFLLVSCITQSLATIENKLNMFAALG 826
+ + GF K F +++ S +T+E K +F G
Sbjct: 239 FNEILNRVCSYGFDPKKAGFVHAMIAFDCTSESTMERKYKLFQRFG 284
>gb|EMJ12443.1| hypothetical protein PRUPE_ppa015858mg, partial [Prunus persica]
Length = 510
Score = 75.5 bits (184), Expect = 2e-11
Identities = 63/236 (26%), Positives = 108/236 (45%), Gaps = 17/236 (7%)
Frame = +2
Query: 170 SWFSSFLVDGLGLS-QSQLSIVQRLYP----------TMFRPTKRAQQAIEIFREYGFTD 316
S+ S+L GLS +S +S+ ++L ++F+ AQ E+FR +GF++
Sbjct: 44 SFTVSYLQKSCGLSSESAISLAKKLQIEATHNPDSVLSLFKTHGDAQTVFELFRSHGFSE 103
Query: 317 LQIKNVIIKCPSVLSYRTDERLRPKLEILKSIGFSTQGLAHAVLRAPRTLA---VKNLDS 487
IK + ++ P + Y + ++PK+E LKS+G S +A + P LA ++
Sbjct: 104 KDIKTLTMRLPKLFIYDAKKTIKPKIEFLKSLGLSELYIAKLLSNEPYVLARSLENHIIP 163
Query: 488 SVEYFKCFFRGSTNLHKAIKKSPHLLQSNID-TANKQITLLREWGFSEEWIFYIICKYPM 664
SV+ F + KAIK +L+ N + + +++ R G E I + P
Sbjct: 164 SVQALVRFLGSDVSASKAIKGCHRMLEYNFEKVLDPNVSIFRSHGVPESLIVKMFLINPR 223
Query: 665 ILHRCEKSTRVR--MEDLRRLGFADKPKSFGFLLVSCITQSLATIENKLNMFAALG 826
L K +RV + D++ LGF F + + S A E KL + +LG
Sbjct: 224 TL--LLKGSRVSEIIGDVKELGFDPNKMLFALAVCTMARMSKACWEQKLETYRSLG 277
>ref|NP_176389.1| mitochondrial transcription termination factor family protein
[Arabidopsis thaliana] gi|3367528|gb|AAC28513.1| Strong
similarity to gi|2160138 F19K23.6 gene product from A.
thaliana BAC gb|AC000375 [Arabidopsis thaliana]
gi|119935863|gb|ABM06016.1| At1g61980 [Arabidopsis
thaliana] gi|332195789|gb|AEE33910.1| mitochondrial
transcription termination factor family protein
[Arabidopsis thaliana]
Length = 418
Score = 75.5 bits (184), Expect = 2e-11
Identities = 63/226 (27%), Positives = 104/226 (46%), Gaps = 7/226 (3%)
Frame = +2
Query: 170 SWFSSFLVDGLGLSQSQLSIVQRLYPTMFRPTKRAQQAIEIFREYGFTDLQIKNVIIKCP 349
S+ S+LVD LGL + V R F + + R +GFTD QI ++ P
Sbjct: 52 SFTVSYLVDSLGLPKKLAESVSR--KVSFEDKDNPDSVLNLLRSHGFTDSQISTIVTDYP 109
Query: 350 SVLSYRTDERLRPKLEILKSIGFSTQGLAHAVLRAPRTLAVKNLDSSVEYFKCFFRGS-- 523
+L ++ L PKL+ L+S G S+ L V P+ L K ++ F F + +
Sbjct: 110 QLLVADAEKSLAPKLQFLQSRGASSSELTEIVSTVPKILG-KRGHKTISVFYDFIKETLL 168
Query: 524 TNLHKAIKKSPHLLQSNIDTANKQITLLREWGFSEEWIF--YIICKYPMI-LHRCEKSTR 694
K+ K Q N++ + +++LRE G + +F I C P+ + E+S +
Sbjct: 169 DKSSKSEKSCQPFPQGNLENKIRNLSVLRELGMPHKLLFPLLISCDVPVFGKEKFEESLK 228
Query: 695 VRMEDLRRLGFADKPKSFGFLLVSCITQSLA--TIENKLNMFAALG 826
+E +GF P + F+ C+ Q L+ IE+K+N + LG
Sbjct: 229 KVVE----MGF--DPSTSKFVEALCVVQRLSDKNIEDKVNAYKRLG 268
>ref|XP_002888053.1| hypothetical protein ARALYDRAFT_475137 [Arabidopsis lyrata subsp.
lyrata] gi|297333894|gb|EFH64312.1| hypothetical protein
ARALYDRAFT_475137 [Arabidopsis lyrata subsp. lyrata]
Length = 419
Score = 75.1 bits (183), Expect = 3e-11
Identities = 65/224 (29%), Positives = 104/224 (46%), Gaps = 9/224 (4%)
Frame = +2
Query: 182 SFLVDGLGLSQSQLSIVQRLYPTMFRPTKRAQQAIEIFREYGFTDLQIKNVIIKCPSVLS 361
S+LVD LGL++ + R F + +FR +GFTD QI +++ P +L
Sbjct: 56 SYLVDSLGLARKLAESISR--KVSFEDKANPDSVLNLFRSHGFTDSQISSIVTDYPQLLI 113
Query: 362 YRTDERLRPKLEILKSIGFSTQGLAHAVLRAPRTLAVKNLDSSVEYFKCFFRGSTNLH-- 535
++ L PKL+ L+S S+ L V + P+ L + + Y+ F T LH
Sbjct: 114 ADAEKSLGPKLQFLQSREASSSELTEIVSQVPKILGKRGHKTISVYYD--FIKDTLLHDK 171
Query: 536 --KAIKKSPHLLQSNIDTANKQITLLREWGFSEEWIF--YIICKYPMI-LHRCEKSTRVR 700
K K Q N++ + I++LRE G + +F I C P+ + E+S +
Sbjct: 172 SSKKEKSCHSFPQGNLENKIRNISVLRELGMPHKLLFPLLISCDVPVFGKEKFEESLKKV 231
Query: 701 MEDLRRLGFADKPKSFGFLLVSCITQSLA--TIENKLNMFAALG 826
++ +GF P S FL + Q L+ TIE K+N + LG
Sbjct: 232 VD----MGF--DPTSAKFLEALRVVQRLSDKTIEEKVNAYERLG 269
>ref|XP_002304896.2| hypothetical protein POPTR_0004s01290g [Populus trichocarpa]
gi|550340076|gb|EEE85407.2| hypothetical protein
POPTR_0004s01290g [Populus trichocarpa]
Length = 394
Score = 74.7 bits (182), Expect = 4e-11
Identities = 53/223 (23%), Positives = 111/223 (49%), Gaps = 4/223 (1%)
Frame = +2
Query: 170 SWFSSFLVDGLGLS-QSQLSIVQRLYPTMFRPTKRAQQAIEIFREYGFTDLQIKNVIIKC 346
S+ S+L++ G S +S L + ++++ F + + +F+ YGF+ I N++ +
Sbjct: 52 SFTVSYLMNKCGFSLKSALEVSKQVH---FETPDKPDTVLAVFKNYGFSKSHILNLVTRR 108
Query: 347 PSVLSYRTDERLRPKLEILKSIGFSTQGLAHAVLRAPRTLAV---KNLDSSVEYFKCFFR 517
P+VL + + L PKLE +S GFS+ + PR L L + ++ + +
Sbjct: 109 PTVLLSKPNTTLLPKLEFFQSKGFSSPDHVKIISSYPRILMCSLENQLVPAFDFLENLLQ 168
Query: 518 GSTNLHKAIKKSPHLLQSNIDTANKQITLLREWGFSEEWIFYIICKYPMILHRCEKSTRV 697
++ KAIK+ P +L N+++ + + +LR+ G ++ I +I P I+ ++ +
Sbjct: 169 SDASVIKAIKRYPGILYINVESMARVVDVLRDNGVPKKNIALLIRSKPSIMISNLENFKN 228
Query: 698 RMEDLRRLGFADKPKSFGFLLVSCITQSLATIENKLNMFAALG 826
++ + +GF F ++ ++ S +T ENK ++ G
Sbjct: 229 LIQKVALMGFRPSKSQFVCAIMVLMSLSRSTWENKFAVYRRWG 271
>ref|XP_002271898.1| PREDICTED: uncharacterized protein LOC100258309 [Vitis vinifera]
gi|297744182|emb|CBI37152.3| unnamed protein product
[Vitis vinifera]
Length = 412
Score = 74.7 bits (182), Expect = 4e-11
Identities = 63/235 (26%), Positives = 107/235 (45%), Gaps = 6/235 (2%)
Frame = +2
Query: 140 SAGSKKPCAFSWFSSFLVDGLGLS-QSQLSIVQRLYPTMFRPTKRAQQAIEIFREYGFTD 316
S S P +S+ S+L + GLS QS LS Q+L + P +R + + R YG TD
Sbjct: 51 SPSSPNPNQYSFTVSYLTNSCGLSPQSALSASQKL--RLVTP-ERPDSVLTLLRNYGITD 107
Query: 317 LQIKNVIIKCPSVLSYRTDERLRPKLEILKSIGFSTQGLAHAVLRAPRTLAVKNLDSSV- 493
Q+ ++ PS+L ++ L PKLE L S F+ L + P L+ ++LD+ +
Sbjct: 108 AQLPKLLRVFPSLLLADPEKTLLPKLEFLHSKAFTRADLGRILSSCPLILS-RSLDNQII 166
Query: 494 ---EYFKCFFRGSTNLHKAIKKSPHLLQSNI-DTANKQITLLREWGFSEEWIFYIICKYP 661
+ K R + A K+SP +L N+ +IT L+E G + + ++I YP
Sbjct: 167 PCHNFLKSILRLDKTVVSACKRSPRILLENVKKNIVPKITALQEIGVPQSSVVFLIKHYP 226
Query: 662 MILHRCEKSTRVRMEDLRRLGFADKPKSFGFLLVSCITQSLATIENKLNMFAALG 826
++ ++++ GF F + S +T E K+ ++ G
Sbjct: 227 YVVQLKNDKFHEIVKEVMESGFDPLKMVFITAIQVFAGMSKSTWEQKMEVYRRWG 281
>emb|CAN68941.1| hypothetical protein VITISV_028996 [Vitis vinifera]
Length = 2634
Score = 73.9 bits (180), Expect = 6e-11
Identities = 64/249 (25%), Positives = 122/249 (48%), Gaps = 9/249 (3%)
Frame = +2
Query: 107 ELIDISNGMQISAGSKKPCAFSWFSSFLVDGLGLS-QSQLSIVQRLYPTMFRPTKRAQQA 283
EL D+ N + + K+ S+ S+L++ GLS +S LS +++ F +RA
Sbjct: 511 ELYDLQNWFRSFSSPKQ---HSFTVSYLMNSCGLSTESALSASRKV---QFETPERADSV 564
Query: 284 IEIFREYGFTDLQIKNVIIKCPSVLSYRTDERLRPKLEILKSIGFSTQGLAHAVLRAP-- 457
+ + R YG T+ I ++ + P +L+ ++ L PKLE +S+GFS LA V+ +P
Sbjct: 565 LALLRNYGCTNTHISKIVSRYPLLLTANPEKTLLPKLEFFRSVGFSGPDLASIVVSSPII 624
Query: 458 -RTLAVKNLDSSVEYFKCFFRGSTNLHKAIKKSPHLLQSNIDTA-NKQITLLREWGFSEE 631
R ++ S + K + N+ +A KK+ + N+ A I +L E G
Sbjct: 625 LRRSLENHVIPSYNFLKSVVMVNENIVRAFKKTFWISGQNVQNAIAPNIAILEEIGVPMS 684
Query: 632 WIFYIICKYPMILHRCEKSTRVRMEDLRRLGFADKPKSFGFLL---VSC-ITQSLATIEN 799
+ +++ +P ++ + + ++ + +GF P FL VSC +T+S+ +E+
Sbjct: 685 NMKFLVTCHPNVVSQNREKFSRSVKKVIEMGF--NPLRLSFLKAIEVSCQLTESM--LEH 740
Query: 800 KLNMFAALG 826
K+ ++ G
Sbjct: 741 KMEVYRRWG 749
Score = 68.6 bits (166), Expect = 3e-09
Identities = 50/196 (25%), Positives = 98/196 (50%), Gaps = 6/196 (3%)
Frame = +2
Query: 158 PCAFSWFSSFLVDGLGLS-QSQLSIVQRLYPTMFRPTKRAQQAIEIFREYGFTDLQIKNV 334
P S+ S+L++ GLS +S LS +++ F +RA + + R YG T+ I +
Sbjct: 1791 PKQHSFTVSYLMNSCGLSPESALSASRKI---QFETPERADSVLALLRNYGCTNTHISKI 1847
Query: 335 IIKCPSVLSYRTDERLRPKLEILKSIGFSTQGLAHAVLRAPRTLAVKNLDSSV----EYF 502
+ K P +L+ ++ L PKLE +S+GFS LA ++ P L ++L++ V +
Sbjct: 1848 VSKYPLLLTANPEKTLLPKLEFFRSVGFSGPDLAGIIVAKPSILK-RSLENHVIPNYNFL 1906
Query: 503 KCFFRGSTNLHKAIKKSPHLLQSNIDTAN-KQITLLREWGFSEEWIFYIICKYPMILHRC 679
K + N+ +A++++ L ++ T N I L+E G I + + +P + +
Sbjct: 1907 KSVGMINENIARALRRTYWLTGQSVQTTNVPNIATLKEIGVPMSNISFFLTCHPSAVSQN 1966
Query: 680 EKSTRVRMEDLRRLGF 727
++ ++ + +GF
Sbjct: 1967 KEKFSTNVKKVIEMGF 1982
Score = 63.5 bits (153), Expect = 8e-08
Identities = 52/196 (26%), Positives = 98/196 (50%), Gaps = 6/196 (3%)
Frame = +2
Query: 158 PCAFSWFSSFLVDGLGLS-QSQLSIVQRLYPTMFRPTKRAQQAIEIFREYGFTDLQIKNV 334
P S+ S+L++ GLS +S LS +++ F +RA + + R YG T+ I +
Sbjct: 2280 PKQHSFTVSYLMNSCGLSPESALSASRKV---QFETPERADSVLALLRNYGCTNTHISKI 2336
Query: 335 IIKCPSVLSYRTDERLRPKLEILKSIGFSTQGLAHAVLRAPRTLAVKNLDS----SVEYF 502
+ + P +L+ ++ L PKLE +S+GFS LA V +P+ L ++L++ S +
Sbjct: 2337 VSRYPVLLTANPEKTLLPKLEFFRSVGFSGPDLASIVAASPQILR-RSLENHVIPSYNFL 2395
Query: 503 KCFFRGSTNLHKAIKKSPHLL-QSNIDTANKQITLLREWGFSEEWIFYIICKYPMILHRC 679
K + + +A+ KS L Q+ +T I +L+E G I + + +P + +
Sbjct: 2396 KSVVIVNEKIVRALSKSYWLNGQTLQNTIAPNIEILKEIGVPISKISFFVTCHPSAVSQN 2455
Query: 680 EKSTRVRMEDLRRLGF 727
+K ++ + +GF
Sbjct: 2456 KKKFSRIVKMVTEMGF 2471
Score = 60.8 bits (146), Expect = 6e-07
Identities = 47/173 (27%), Positives = 83/173 (47%), Gaps = 5/173 (2%)
Frame = +2
Query: 158 PCAFSWFSSFLVDGLGLSQSQLSIVQRLYPTMFRPTKRAQQAIEIFREYGFTDLQIKNVI 337
P S+ S+L++ GLS R F +RA + + R YG T+ I ++
Sbjct: 898 PKQXSFTVSYLMNSCGLSPEXALSASR--KVQFETPERADSVLALLRNYGCTNTHISKIV 955
Query: 338 IKCPSVLSYRTDERLRPKLEILKSIGFSTQGLAHAVLRAPRTLAVKNLDS----SVEYFK 505
+ P +L+ ++ L PKLE +S+GFS LA V +P+ L ++L++ S + K
Sbjct: 956 SRYPLLLTANPEKTLLPKLEFFRSVGFSGPDLASIVAASPQILR-RSLENHVIPSYNFLK 1014
Query: 506 CFFRGSTNLHKAIKKSPHLL-QSNIDTANKQITLLREWGFSEEWIFYIICKYP 661
+ N+ +A+ KS L QS + I +L++ G I +++ +P
Sbjct: 1015 SVVMVNENIVRALNKSYWLNGQSLPNIIVPNIEILKDIGVPMSNISFLVTCHP 1067
Score = 60.1 bits (144), Expect = 9e-07
Identities = 50/181 (27%), Positives = 83/181 (45%), Gaps = 6/181 (3%)
Frame = +2
Query: 170 SWFSSFLVDGLGLS-QSQLSIVQRLYPTMFRPTKRAQQAIEIFREYGFTDLQIKNVIIKC 346
S+ S+L++ GLS +S LS +++ F A + + R YG T+ I ++ K
Sbjct: 48 SFTVSYLINSCGLSPESALSASRKV---QFETPDGADSVLALLRNYGCTNTHISKIVSKY 104
Query: 347 PSVLSYRTDERLRPKLEILKSIGFSTQGLAHAVLRAPRTL---AVKNLDSSVEYFKCFFR 517
P +L +++ L PKLE S GFS L V+ +P L +L S + K
Sbjct: 105 PLLLIANSEKTLLPKLEFFXSAGFSGPDLVRIVVGSPSILKRSLENHLIPSYNFLKSMDM 164
Query: 518 GSTNLHKAIKKSPHLLQSNI-DTANKQITLLREWGFSEEWIFYIICKYP-MILHRCEKST 691
N+ KA +S L ++ DT + +L+E G I ++ +P + EK +
Sbjct: 165 VHENIVKAFSRSYWLTGKSVQDTIASNVEILKEIGVPMSNISSLVAMHPCAVFQNREKFS 224
Query: 692 R 694
R
Sbjct: 225 R 225
>ref|XP_002269678.2| PREDICTED: uncharacterized protein LOC100245941 [Vitis vinifera]
Length = 352
Score = 73.2 bits (178), Expect = 1e-10
Identities = 64/249 (25%), Positives = 121/249 (48%), Gaps = 9/249 (3%)
Frame = +2
Query: 107 ELIDISNGMQISAGSKKPCAFSWFSSFLVDGLGLS-QSQLSIVQRLYPTMFRPTKRAQQA 283
EL D+ N + + K+ S+ S+L++ GLS +S LS +++ F RA
Sbjct: 11 ELYDLQNWFRSFSSPKQ---HSFTVSYLMNSCGLSTESALSASRKV---QFETPDRADSV 64
Query: 284 IEIFREYGFTDLQIKNVIIKCPSVLSYRTDERLRPKLEILKSIGFSTQGLAHAVLRAP-- 457
+ + R YG T+ I ++ + P +L+ ++ L PKLE +S+GFS LA V+ +P
Sbjct: 65 LALLRNYGCTNTHISKIVSRYPLLLTANPEKTLLPKLEFFRSVGFSGPDLASIVVSSPII 124
Query: 458 -RTLAVKNLDSSVEYFKCFFRGSTNLHKAIKKSPHLLQSNIDTA-NKQITLLREWGFSEE 631
R ++ S + K + N+ +A KK+ + N+ A I +L E G
Sbjct: 125 LRRSLENHVIPSYNFLKSVVMVNENIVRAFKKTFWISGQNVQNAIAPNIAILEEIGVPMS 184
Query: 632 WIFYIICKYPMILHRCEKSTRVRMEDLRRLGFADKPKSFGFLL---VSC-ITQSLATIEN 799
+ +++ +P ++ + + ++ + +GF P FL VSC +T+S+ +E+
Sbjct: 185 NMKFLVTCHPNVVSQNREKFSRSVKKVIEMGF--NPLRLSFLKAIEVSCQLTESM--LEH 240
Query: 800 KLNMFAALG 826
K+ ++ G
Sbjct: 241 KMEVYRRWG 249
>ref|XP_002271836.1| PREDICTED: uncharacterized protein LOC100241175 [Vitis vinifera]
Length = 410
Score = 73.2 bits (178), Expect = 1e-10
Identities = 63/234 (26%), Positives = 109/234 (46%), Gaps = 6/234 (2%)
Frame = +2
Query: 143 AGSKKPCAFSWFSSFLVDGLGLS-QSQLSIVQRLYPTMFRPTKRAQQAIEIFREYGFTDL 319
+ + K C F+ S+L++ GLS S LS Q+L+ + P +R + + R YG TD
Sbjct: 52 SANPKQCYFT--VSYLINSCGLSPDSALSASQKLH--LVTP-ERPDSILSLLRNYGITDT 106
Query: 320 QIKNVIIKCPSVLSYRTDERLRPKLEILKSIGFSTQGLAHAVLRAPRTLAVKNLDSSV-- 493
Q+ +I P++L ++ L PKLE L S FS L + P L+ ++LD+ +
Sbjct: 107 QLPKLIRVFPTLLLTDPEKTLLPKLEFLNSKPFSRADLGRVLSSCPMILS-RSLDNQIIP 165
Query: 494 --EYFKCFFRGSTNLHKAIKKSPHLLQSNID-TANKQITLLREWGFSEEWIFYIICKYPM 664
+FK + AIK+SP + +++ IT L+E G E I ++I YP+
Sbjct: 166 CYNFFKSILHLDNRVVSAIKRSPRIFLEDVNKNIVPNITALQEIGVPESSIVFLITYYPI 225
Query: 665 ILHRCEKSTRVRMEDLRRLGFADKPKSFGFLLVSCITQSLATIENKLNMFAALG 826
++ ++ + +GF F + S +T E K+ ++ G
Sbjct: 226 VVQLKHDRFGETVKKVMEMGFDPLTVVFIKAIQVFGGMSKSTWEQKMEVYRRWG 279
>ref|XP_006597741.1| PREDICTED: uncharacterized protein LOC102666739 [Glycine max]
Length = 395
Score = 72.8 bits (177), Expect = 1e-10
Identities = 58/219 (26%), Positives = 104/219 (47%), Gaps = 4/219 (1%)
Frame = +2
Query: 182 SFLVDGLGLSQSQLSIVQRLYPTMFRPTKRAQQAIEIFREYGFTDLQIKNVIIKCPSVLS 361
S+LV G S + + T F+ ++ I +FR +GF++ QI ++I + P+VLS
Sbjct: 55 SYLVSTCGFSVETALKISKF--TQFKTPEKPDSIIALFRSHGFSNTQIISIIRRAPNVLS 112
Query: 362 YRTDERLRPKLEILKSIGFSTQGLAHAVLRAPRTLAV---KNLDSSVEYFKCFFRGSTNL 532
+R+ PK E L+S G S + V + PR L N+ S E + F
Sbjct: 113 GDPHKRIFPKFEFLRSKGASGSDIVELVTKNPRILYANLENNIVPSYELVRRFLESDKKT 172
Query: 533 HKAIKKSPHLLQSNIDTANKQITLLREWGFSEEWIFYII-CKYPMILHRCEKSTRVRMED 709
I+ H S D A++ + LL + G ++ I +++ ++ +IL K T +++
Sbjct: 173 MDCIRGCGHFFGS--DRASQNVKLLIDEGATDSVIAFLLQRRFSVILCSGFKET---LDE 227
Query: 710 LRRLGFADKPKSFGFLLVSCITQSLATIENKLNMFAALG 826
++ +GF K FG L++ + E K+++F G
Sbjct: 228 IKEMGFEPFKKKFGVALIAKKIVPKSHWEAKVDVFKRWG 266