BLASTX nr result

ID: Ephedra25_contig00025957 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra25_contig00025957
         (523 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_567118.1| E3 ubiquitin-protein ligase SINAT3 [Arabidopsis...    55   7e-06
ref|XP_006402441.1| hypothetical protein EUTSA_v10006100mg [Eutr...    55   7e-06
ref|XP_006292976.1| hypothetical protein CARUB_v10019253mg [Caps...    55   7e-06
ref|XP_004168590.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin...    55   7e-06
ref|XP_004140587.1| PREDICTED: E3 ubiquitin-protein ligase SINAT...    55   7e-06
gb|AAM61286.1| seven in absentia-like protein [Arabidopsis thali...    55   7e-06
ref|XP_002878413.1| hypothetical protein ARALYDRAFT_486680 [Arab...    55   7e-06
emb|CAB71109.1| seven in absentia-like protein [Arabidopsis thal...    55   7e-06
ref|XP_002973058.1| hypothetical protein SELMODRAFT_98090 [Selag...    55   1e-05
ref|XP_002984527.1| hypothetical protein SELMODRAFT_268881 [Sela...    55   1e-05

>ref|NP_567118.1| E3 ubiquitin-protein ligase SINAT3 [Arabidopsis thaliana]
           gi|46577447|sp|Q84JL3.1|SINA3_ARATH RecName: Full=E3
           ubiquitin-protein ligase SINAT3; AltName: Full=Seven in
           absentia homolog 3 gi|28393157|gb|AAO42011.1| putative
           seven in absentia protein [Arabidopsis thaliana]
           gi|28827536|gb|AAO50612.1| putative seven in absentia
           protein [Arabidopsis thaliana]
           gi|332646736|gb|AEE80257.1| E3 ubiquitin-protein ligase
           SINAT3 [Arabidopsis thaliana]
          Length = 326

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 23/24 (95%), Positives = 24/24 (100%)
 Frame = -1

Query: 523 TTSSVHELLECPVCTNSMYPPIHQ 452
           TT+SVHELLECPVCTNSMYPPIHQ
Sbjct: 53  TTTSVHELLECPVCTNSMYPPIHQ 76


>ref|XP_006402441.1| hypothetical protein EUTSA_v10006100mg [Eutrema salsugineum]
           gi|557103540|gb|ESQ43894.1| hypothetical protein
           EUTSA_v10006100mg [Eutrema salsugineum]
          Length = 323

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 23/24 (95%), Positives = 24/24 (100%)
 Frame = -1

Query: 523 TTSSVHELLECPVCTNSMYPPIHQ 452
           TT+SVHELLECPVCTNSMYPPIHQ
Sbjct: 50  TTTSVHELLECPVCTNSMYPPIHQ 73


>ref|XP_006292976.1| hypothetical protein CARUB_v10019253mg [Capsella rubella]
           gi|482561683|gb|EOA25874.1| hypothetical protein
           CARUB_v10019253mg [Capsella rubella]
          Length = 322

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 23/24 (95%), Positives = 24/24 (100%)
 Frame = -1

Query: 523 TTSSVHELLECPVCTNSMYPPIHQ 452
           TT+SVHELLECPVCTNSMYPPIHQ
Sbjct: 49  TTTSVHELLECPVCTNSMYPPIHQ 72


>ref|XP_004168590.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase
           SINAT3-like [Cucumis sativus]
          Length = 304

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 23/24 (95%), Positives = 24/24 (100%)
 Frame = -1

Query: 523 TTSSVHELLECPVCTNSMYPPIHQ 452
           TT+SVHELLECPVCTNSMYPPIHQ
Sbjct: 43  TTTSVHELLECPVCTNSMYPPIHQ 66


>ref|XP_004140587.1| PREDICTED: E3 ubiquitin-protein ligase SINAT3-like [Cucumis
           sativus]
          Length = 304

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 23/24 (95%), Positives = 24/24 (100%)
 Frame = -1

Query: 523 TTSSVHELLECPVCTNSMYPPIHQ 452
           TT+SVHELLECPVCTNSMYPPIHQ
Sbjct: 43  TTTSVHELLECPVCTNSMYPPIHQ 66


>gb|AAM61286.1| seven in absentia-like protein [Arabidopsis thaliana]
          Length = 326

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 23/24 (95%), Positives = 24/24 (100%)
 Frame = -1

Query: 523 TTSSVHELLECPVCTNSMYPPIHQ 452
           TT+SVHELLECPVCTNSMYPPIHQ
Sbjct: 53  TTTSVHELLECPVCTNSMYPPIHQ 76


>ref|XP_002878413.1| hypothetical protein ARALYDRAFT_486680 [Arabidopsis lyrata subsp.
           lyrata] gi|297324251|gb|EFH54672.1| hypothetical protein
           ARALYDRAFT_486680 [Arabidopsis lyrata subsp. lyrata]
          Length = 318

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 23/24 (95%), Positives = 24/24 (100%)
 Frame = -1

Query: 523 TTSSVHELLECPVCTNSMYPPIHQ 452
           TT+SVHELLECPVCTNSMYPPIHQ
Sbjct: 45  TTTSVHELLECPVCTNSMYPPIHQ 68


>emb|CAB71109.1| seven in absentia-like protein [Arabidopsis thaliana]
          Length = 315

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 23/24 (95%), Positives = 24/24 (100%)
 Frame = -1

Query: 523 TTSSVHELLECPVCTNSMYPPIHQ 452
           TT+SVHELLECPVCTNSMYPPIHQ
Sbjct: 42  TTTSVHELLECPVCTNSMYPPIHQ 65


>ref|XP_002973058.1| hypothetical protein SELMODRAFT_98090 [Selaginella moellendorffii]
           gi|300159659|gb|EFJ26279.1| hypothetical protein
           SELMODRAFT_98090 [Selaginella moellendorffii]
          Length = 318

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 23/24 (95%), Positives = 24/24 (100%)
 Frame = -1

Query: 523 TTSSVHELLECPVCTNSMYPPIHQ 452
           +TSSVHELLECPVCTNSMYPPIHQ
Sbjct: 60  STSSVHELLECPVCTNSMYPPIHQ 83


>ref|XP_002984527.1| hypothetical protein SELMODRAFT_268881 [Selaginella moellendorffii]
           gi|300147915|gb|EFJ14577.1| hypothetical protein
           SELMODRAFT_268881 [Selaginella moellendorffii]
          Length = 318

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 23/24 (95%), Positives = 24/24 (100%)
 Frame = -1

Query: 523 TTSSVHELLECPVCTNSMYPPIHQ 452
           +TSSVHELLECPVCTNSMYPPIHQ
Sbjct: 60  STSSVHELLECPVCTNSMYPPIHQ 83


Top