BLASTX nr result

ID: Ephedra25_contig00025955 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra25_contig00025955
         (433 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ADE76674.1| unknown [Picea sitchensis]                              64   2e-08
gb|ABK26627.1| unknown [Picea sitchensis]                              62   8e-08
ref|XP_004168905.1| PREDICTED: uncharacterized protein LOC101232...    57   3e-06

>gb|ADE76674.1| unknown [Picea sitchensis]
          Length = 335

 Score = 64.3 bits (155), Expect = 2e-08
 Identities = 38/102 (37%), Positives = 56/102 (54%), Gaps = 4/102 (3%)
 Frame = +3

Query: 93  PFAKFLLTECGFKEPELRTQGKKFQHLNNTRKKLDIFRSSLNFLKQYGFTEEQIKKILTR 272
           P ++FLL ECG  E +L    KK  HL  TR      + ++  L+  GFTE+Q+ KI+TR
Sbjct: 61  PISEFLLNECGLCESQLSGILKKRPHLVRTRST-HTAQQAVQLLRDSGFTEDQVCKIITR 119

Query: 273 CPSAISVN----LAPKIQHLKNFGFKHGDIMQMVLENPRFLT 386
            PS ++ N    L PKI+ +K  G    +I  +  + PR L+
Sbjct: 120 NPSILTYNADRQLKPKIEFMKTLGLTAHEIGNVTCQGPRLLS 161


>gb|ABK26627.1| unknown [Picea sitchensis]
          Length = 282

 Score = 62.0 bits (149), Expect = 8e-08
 Identities = 38/112 (33%), Positives = 58/112 (51%), Gaps = 4/112 (3%)
 Frame = +3

Query: 93  PFAKFLLTECGFKEPELRTQGKKFQHLNNTRKKLDIFRSSLNFLKQYGFTEEQIKKILTR 272
           P ++FLL ECG  + EL T  K+   L  T K     + ++ FL+  GFTE Q++K +T 
Sbjct: 63  PISEFLLNECGMCQSELSTILKRRPSLVAT-KSTHTAQQAVQFLRDSGFTEHQVRKTITS 121

Query: 273 CPSAISVN----LAPKIQHLKNFGFKHGDIMQMVLENPRFLTCRFQDKLNSD 416
            PS ++ N    L PKI+ +K  G    D   ++    R LTC  +  L ++
Sbjct: 122 NPSILTFNADRRLKPKIEFMKTLGLTAQDFGNVLSYGFRLLTCSLEKTLRTN 173


>ref|XP_004168905.1| PREDICTED: uncharacterized protein LOC101232607 [Cucumis sativus]
          Length = 373

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 32/98 (32%), Positives = 50/98 (51%), Gaps = 4/98 (4%)
 Frame = +3

Query: 102 KFLLTECGFKEPELRTQGKKFQHLNNTRKKLDIFRSSLNFLKQYGFTEEQIKKILTRCP- 278
           +FL   CG       + G+K Q      K++  + + + FLK YGF   QI K+++R P 
Sbjct: 35  QFLTNSCGLSSGSPTSSGRKLQF---DEKRIQQYGAIIGFLKSYGFENPQIAKLVSRQPS 91

Query: 279 ---SAISVNLAPKIQHLKNFGFKHGDIMQMVLENPRFL 383
              S +S NL PK + L+  GF    + +++L NP  L
Sbjct: 92  ILQSGVSKNLKPKFEFLQEIGFVGPLLPKVILSNPAIL 129


Top