BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra25_contig00025936
         (1333 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EOY07747.1| Tetratricopeptide repeat (TPR)-like superfamily p...   333   1e-88
ref|XP_002273172.1| PREDICTED: pentatricopeptide repeat-containi...   332   3e-88
ref|XP_006407654.1| hypothetical protein EUTSA_v10020113mg [Eutr...   324   4e-86
gb|EPS62297.1| hypothetical protein M569_12494, partial [Genlise...   323   8e-86
ref|XP_006428878.1| hypothetical protein CICLE_v10011148mg [Citr...   323   1e-85
ref|XP_004306228.1| PREDICTED: pentatricopeptide repeat-containi...   322   2e-85
gb|EMJ07627.1| hypothetical protein PRUPE_ppa001926mg [Prunus pe...   322   2e-85
ref|XP_002322855.2| hypothetical protein POPTR_0016s08650g [Popu...   322   3e-85
ref|XP_006296758.1| hypothetical protein CARUB_v10015405mg [Caps...   322   3e-85
ref|XP_006361774.1| PREDICTED: pentatricopeptide repeat-containi...   321   4e-85
ref|XP_004137961.1| PREDICTED: pentatricopeptide repeat-containi...   321   4e-85
emb|CBI32614.3| unnamed protein product [Vitis vinifera]              320   6e-85
ref|XP_002882632.1| HCF152 [Arabidopsis lyrata subsp. lyrata] gi...   319   2e-84
gb|ESW16523.1| hypothetical protein PHAVU_007G163500g [Phaseolus...   315   4e-83
dbj|BAJ98927.1| predicted protein [Hordeum vulgare subsp. vulgare]    315   4e-83
ref|XP_004497462.1| PREDICTED: pentatricopeptide repeat-containi...   314   5e-83
ref|XP_004497461.1| PREDICTED: pentatricopeptide repeat-containi...   314   5e-83
ref|XP_003536980.1| PREDICTED: pentatricopeptide repeat-containi...   314   6e-83
ref|NP_187576.1| RNA binding protein HCF152 [Arabidopsis thalian...   313   8e-83
dbj|BAD95223.1| hypothetical protein [Arabidopsis thaliana]           313   8e-83

>gb|EOY07747.1| Tetratricopeptide repeat (TPR)-like superfamily protein [Theobroma
            cacao]
          Length = 758

 Score =  333 bits (854), Expect = 1e-88
 Identities = 164/317 (51%), Positives = 228/317 (71%), Gaps = 8/317 (2%)
 Frame = -3

Query: 1328 PDHMTYTTAISAFVRMDMINEAHALLQEMAMQGLNANHLTYNTLLNGYCVLQKMKKAKQL 1149
            PDH+TYTT +SAFV+  +++ A  +L EM   G+ AN +TYN LL GYC   ++ KAK+L
Sbjct: 431  PDHVTYTTVVSAFVKAGLMDRAREVLAEMTRIGVPANWITYNILLKGYCQQLQIDKAKEL 490

Query: 1148 IEEMRD-AGIVPDIVTYNTLINGCIEAMDNVSALEYFDEMKKAAVRPSEITYTILMKAFA 972
            + EM D A I PD+V+YN LI+GCI   D+  AL +F+EM++  + P++I+YT LMKAFA
Sbjct: 491  LREMADDAEIKPDVVSYNILIDGCILIDDSAGALAFFNEMRERGIAPTKISYTTLMKAFA 550

Query: 971  RAGQPKNATKVFDELLRDPQIKVDLPAWNMLLESYCMAGMVETAKLVMQQMREKKIDPNA 792
             +GQPK A KVFDE+LRDP++KVDL AWNML+E Y   G+VE AK ++Q+M+EK   PN 
Sbjct: 551  LSGQPKLANKVFDEMLRDPRVKVDLVAWNMLVEGYSRLGLVEEAKKIIQRMKEKGFYPNV 610

Query: 791  SSYGSFVKGLNIARRPVETLDLWESIKDRIDLKLQNTN-------VQPLKPDKGLLDSFL 633
            ++YGS   G+++AR+P E L LW+ IK+R  +K +  N         PLKPD+GLLD+  
Sbjct: 611  ATYGSLANGISLARKPGEALLLWKEIKERCKMKKEGDNPCSDSSSPPPLKPDEGLLDTLA 670

Query: 632  EIFVRSAYFSKALEVLAFMEGYKFPVNKEKYRKMFRKYHSGIYTSKHKSLVRQNARLDKK 453
            +I VR+A+F KALE++A ME    P NK KY+K++ + HS ++TSKH S  RQ+ R+++K
Sbjct: 671  DICVRAAFFKKALEIVACMEENGIPPNKTKYKKIYVEMHSRMFTSKHASQARQDRRIERK 730

Query: 452  RAAEAFKLWVGLPNVYH 402
            RAAEAFK W+GLPN Y+
Sbjct: 731  RAAEAFKFWLGLPNSYY 747



 Score = 59.7 bits (143), Expect = 3e-06
 Identities = 37/137 (27%), Positives = 69/137 (50%)
 Frame = -3

Query: 1118 PDIVTYNTLINGCIEAMDNVSALEYFDEMKKAAVRPSEITYTILMKAFARAGQPKNATKV 939
            PD   YN ++N C    D    L+ F+EM +    P  +TY +++K  ARA +      V
Sbjct: 224  PDTAAYNAVLNACANLGDKSKFLKLFEEMSEWGCEPDVLTYNVMIKLLARADRKDLLVFV 283

Query: 938  FDELLRDPQIKVDLPAWNMLLESYCMAGMVETAKLVMQQMREKKIDPNASSYGSFVKGLN 759
             + ++ + +I++ +   + L+ +Y     +ETA+ ++Q MRE++ D       + ++ LN
Sbjct: 284  LERIV-EKRIRLCMTTLHSLVAAYVGFDDLETAERIVQAMREQRNDLCKILRDANLEDLN 342

Query: 758  IARRPVETLDLWESIKD 708
             A    E  +  E+ KD
Sbjct: 343  QAEEDEEEEEEEENRKD 359



 Score = 58.2 bits (139), Expect = 8e-06
 Identities = 47/201 (23%), Positives = 82/201 (40%), Gaps = 18/201 (8%)
 Frame = -3

Query: 1331 RPDHMTYTTAISAFVRMDMINEAHALLQEMAMQGLNANHLTYNTLLNGYCVLQKMKKAKQ 1152
            +PD ++Y   I   + +D    A A   EM  +G+    ++Y TL+  + +  + K A +
Sbjct: 501  KPDVVSYNILIDGCILIDDSAGALAFFNEMRERGIAPTKISYTTLMKAFALSGQPKLANK 560

Query: 1151 LIEEM-RDAGIVPDIVTYNTLINGCIEAMDNVSALEYFDEMKKAAVRPSEITYTILMKAF 975
            + +EM RD  +  D+V +N L+ G         A +    MK+    P+  TY  L    
Sbjct: 561  VFDEMLRDPRVKVDLVAWNMLVEGYSRLGLVEEAKKIIQRMKEKGFYPNVATYGSLANGI 620

Query: 974  ARAGQPKNATKVFDELLR-----------------DPQIKVDLPAWNMLLESYCMAGMVE 846
            + A +P  A  ++ E+                    P +K D    + L +    A   +
Sbjct: 621  SLARKPGEALLLWKEIKERCKMKKEGDNPCSDSSSPPPLKPDEGLLDTLADICVRAAFFK 680

Query: 845  TAKLVMQQMREKKIDPNASSY 783
             A  ++  M E  I PN + Y
Sbjct: 681  KALEIVACMEENGIPPNKTKY 701


>ref|XP_002273172.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09650,
            chloroplastic-like [Vitis vinifera]
          Length = 749

 Score =  332 bits (850), Expect = 3e-88
 Identities = 163/315 (51%), Positives = 225/315 (71%), Gaps = 5/315 (1%)
 Frame = -3

Query: 1331 RPDHMTYTTAISAFVRMDMINEAHALLQEMAMQGLNANHLTYNTLLNGYCVLQKMKKAKQ 1152
            +PDH+TYTT +SA V+   ++ A  +L EM   G+ AN +TYN LL GYC   ++ KAK+
Sbjct: 416  QPDHVTYTTVVSALVKAGSMDRARQVLAEMTRIGVPANRVTYNILLKGYCEQLQIDKAKE 475

Query: 1151 LIEEM-RDAGIVPDIVTYNTLINGCIEAMDNVSALEYFDEMKKAAVRPSEITYTILMKAF 975
            L+ EM  D GIVPD+V+YNTLI+GCI   D+  AL YF+EM+   + P++I+YT LMKAF
Sbjct: 476  LVREMVDDEGIVPDVVSYNTLIDGCILVDDSAGALAYFNEMRARGIAPTKISYTTLMKAF 535

Query: 974  ARAGQPKNATKVFDELLRDPQIKVDLPAWNMLLESYCMAGMVETAKLVMQQMREKKIDPN 795
            A +GQPK A KVFDE+LRDP++KVDL AWNML+E++C  G+VE AK  +Q+MRE    PN
Sbjct: 536  ALSGQPKLANKVFDEMLRDPRVKVDLVAWNMLVEAHCRLGLVEEAKKTVQRMRENGFYPN 595

Query: 794  ASSYGSFVKGLNIARRPVETLDLWESIKDRIDLK----LQNTNVQPLKPDKGLLDSFLEI 627
             ++YGS   G+ +AR+P E L LW  +K+R  +K    +  ++  PLKPD+GLLD+  +I
Sbjct: 596  VATYGSLANGIALARKPGEALLLWNEVKERCVVKEEGEISKSSPPPLKPDEGLLDTLADI 655

Query: 626  FVRSAYFSKALEVLAFMEGYKFPVNKEKYRKMFRKYHSGIYTSKHKSLVRQNARLDKKRA 447
             VR+A+F KALE++A ME    P NK KY +++ + HS ++TSKH S  RQ+ R ++KRA
Sbjct: 656  CVRAAFFRKALEIVACMEENGIPPNKSKYTRIYVEMHSRMFTSKHASKARQDRRSERKRA 715

Query: 446  AEAFKLWVGLPNVYH 402
            AEAFK W+GLPN Y+
Sbjct: 716  AEAFKFWLGLPNSYY 730



 Score = 70.5 bits (171), Expect = 2e-09
 Identities = 62/273 (22%), Positives = 108/273 (39%), Gaps = 48/273 (17%)
 Frame = -3

Query: 1148 IEEMRDAGIV----PDIVTYNTLINGCIEAMDNVSALEYFDEMKKAAVRPSEITYTILMK 981
            I    DA +V    PD   YN ++N C    D    L+ F+EM +    P  +TY +++K
Sbjct: 216  IHRFTDATLVADSRPDTAAYNAVLNACANLGDTKRFLQVFEEMTQLGAEPDVLTYNVMIK 275

Query: 980  AFARAGQPKNATKVFDELLRDPQIKVDLPAWNMLLESYCMAGMVETAKLVMQQMREKKID 801
              AR  +      V + +L D  I++ +   + L+ +Y   G +ETA+ ++Q MRE + D
Sbjct: 276  LCARVDRKDLLVFVLERIL-DKGIQLCMTTLHSLVAAYVGFGDLETAEKLVQAMREGRQD 334

Query: 800  --------------------------------------------PNASSYGSFVKGLNIA 753
                                                        P++  Y + +KG    
Sbjct: 335  LCKILRDVNSENPGNNEGYIFDKLLPNSVERNNSEPPLLPKAYAPDSRIYTTLMKGYMKE 394

Query: 752  RRPVETLDLWESIKDRIDLKLQNTNVQPLKPDKGLLDSFLEIFVRSAYFSKALEVLAFME 573
             R  +T+ + E+++ + D   Q        PD     + +   V++    +A +VLA M 
Sbjct: 395  GRVTDTVRMLEAMRHQDDSTSQ--------PDHVTYTTVVSALVKAGSMDRARQVLAEMT 446

Query: 572  GYKFPVNKEKYRKMFRKYHSGIYTSKHKSLVRQ 474
                P N+  Y  + + Y   +   K K LVR+
Sbjct: 447  RIGVPANRVTYNILLKGYCEQLQIDKAKELVRE 479



 Score = 68.6 bits (166), Expect = 6e-09
 Identities = 42/158 (26%), Positives = 77/158 (48%), Gaps = 3/158 (1%)
 Frame = -3

Query: 1208 YNTLLNGYCVLQKMKKAKQLIEEMR---DAGIVPDIVTYNTLINGCIEAMDNVSALEYFD 1038
            Y TL+ GY    ++    +++E MR   D+   PD VTY T+++  ++A     A +   
Sbjct: 384  YTTLMKGYMKEGRVTDTVRMLEAMRHQDDSTSQPDHVTYTTVVSALVKAGSMDRARQVLA 443

Query: 1037 EMKKAAVRPSEITYTILMKAFARAGQPKNATKVFDELLRDPQIKVDLPAWNMLLESYCMA 858
            EM +  V  + +TY IL+K +    Q   A ++  E++ D  I  D+ ++N L++   + 
Sbjct: 444  EMTRIGVPANRVTYNILLKGYCEQLQIDKAKELVREMVDDEGIVPDVVSYNTLIDGCILV 503

Query: 857  GMVETAKLVMQQMREKKIDPNASSYGSFVKGLNIARRP 744
                 A     +MR + I P   SY + +K   ++ +P
Sbjct: 504  DDSAGALAYFNEMRARGIAPTKISYTTLMKAFALSGQP 541


>ref|XP_006407654.1| hypothetical protein EUTSA_v10020113mg [Eutrema salsugineum]
            gi|557108800|gb|ESQ49107.1| hypothetical protein
            EUTSA_v10020113mg [Eutrema salsugineum]
          Length = 777

 Score =  324 bits (831), Expect = 4e-86
 Identities = 159/318 (50%), Positives = 226/318 (71%), Gaps = 9/318 (2%)
 Frame = -3

Query: 1328 PDHMTYTTAISAFVRMDMINEAHALLQEMAMQGLNANHLTYNTLLNGYCVLQKMKKAKQL 1149
            PD +TYTT +SAFV+  +++ A  +L EMA  G+ AN +TYN LL GYC   ++ KA+ L
Sbjct: 449  PDEVTYTTVVSAFVKAGLMDRARQVLGEMARMGVPANRITYNVLLKGYCKQLQIDKAEDL 508

Query: 1148 IEEM-RDAGIVPDIVTYNTLINGCIEAMDNVSALEYFDEMKKAAVRPSEITYTILMKAFA 972
            + EM  DAGI PD+V+YN +I+GCI   D+  AL +F+EM+   + P++I+YT LMKAFA
Sbjct: 509  LREMAEDAGIEPDVVSYNIIIDGCILIDDSAGALSFFNEMRTKGIAPTKISYTTLMKAFA 568

Query: 971  RAGQPKNATKVFDELLRDPQIKVDLPAWNMLLESYCMAGMVETAKLVMQQMREKKIDPNA 792
             +GQPK A +VFDE++RDP++KVDL AWNML+E YC  G++E AK V+ +M+E    PN 
Sbjct: 569  MSGQPKLANRVFDEMMRDPRVKVDLIAWNMLVEGYCRLGLIEDAKRVVSRMKENGFYPNV 628

Query: 791  SSYGSFVKGLNIARRPVETLDLWESIKDRIDLKLQ------NTNVQP--LKPDKGLLDSF 636
            ++YGS   G+++AR+P E L LW+ IK+R ++K +      +T+  P  LKPD+GLLD  
Sbjct: 629  ATYGSLANGVSLARKPGEALLLWKEIKERCEVKKREESEGHSTDPSPSMLKPDEGLLDML 688

Query: 635  LEIFVRSAYFSKALEVLAFMEGYKFPVNKEKYRKMFRKYHSGIYTSKHKSLVRQNARLDK 456
             +I VR+A+F KALE++A ME    P NK KY+K++ + HS ++TSKH S  R   R+++
Sbjct: 689  ADICVRAAFFKKALEIIACMEENGIPPNKTKYKKIYVEMHSRMFTSKHASQARVERRVER 748

Query: 455  KRAAEAFKLWVGLPNVYH 402
            KRAAEAFK W+GLPN Y+
Sbjct: 749  KRAAEAFKFWLGLPNSYY 766


>gb|EPS62297.1| hypothetical protein M569_12494, partial [Genlisea aurea]
          Length = 675

 Score =  323 bits (829), Expect = 8e-86
 Identities = 161/320 (50%), Positives = 226/320 (70%), Gaps = 11/320 (3%)
 Frame = -3

Query: 1328 PDHMTYTTAISAFVRMDMINEAHALLQEMAMQGLNANHLTYNTLLNGYCVLQKMKKAKQL 1149
            PDH+ YTT ISAFV+   +++A  +L EMA + + AN +TYN LL GYC   +M KA+ L
Sbjct: 345  PDHVAYTTVISAFVKARSMDKARQVLAEMAKRDVPANLVTYNILLKGYCQQLQMDKAEDL 404

Query: 1148 IEEMRD-AGIVPDIVTYNTLINGCIEAMDNVSALEYFDEMKKAAVRPSEITYTILMKAFA 972
            I EM + AGI PD V+YNTLI+GCI + D+  AL YF+EM+   + P++++YT LMKAFA
Sbjct: 405  IREMINRAGIEPDAVSYNTLIDGCILSDDSAGALAYFNEMRTRGIAPTKVSYTTLMKAFA 464

Query: 971  RAGQPKNATKVFDELLRDPQIKVDLPAWNMLLESYCMAGMVETAKLVMQQMREKKIDPNA 792
             +GQPK A KVFDE+L+DP++K DL AWNML+E YC  GMVE AK V+Q M++  + PN 
Sbjct: 465  SSGQPKLANKVFDEMLKDPRVKPDLIAWNMLVEGYCKLGMVEEAKTVIQAMKDYGVHPNV 524

Query: 791  SSYGSFVKGLNIARRPVETLDLWESIKDRIDL----------KLQNTNVQPLKPDKGLLD 642
            ++YGS   G+++AR+P E L LW  IK+R  +             ++++ PLKPD+GLLD
Sbjct: 525  ATYGSLANGISVARKPGEALLLWNEIKERCGIISIEESSSSSSSSSSSLPPLKPDEGLLD 584

Query: 641  SFLEIFVRSAYFSKALEVLAFMEGYKFPVNKEKYRKMFRKYHSGIYTSKHKSLVRQNARL 462
            +  +I VR+A+F KALE++A ME +  P NK KY++++ + HS ++TSKH S  R + R 
Sbjct: 585  TLADICVRAAFFRKALEIVACMEEHGIPPNKIKYKRIYVEMHSRMFTSKHASRARVDRRK 644

Query: 461  DKKRAAEAFKLWVGLPNVYH 402
            ++KRAAEAFK W+GLPN Y+
Sbjct: 645  ERKRAAEAFKFWLGLPNEYY 664


>ref|XP_006428878.1| hypothetical protein CICLE_v10011148mg [Citrus clementina]
            gi|568853953|ref|XP_006480600.1| PREDICTED:
            pentatricopeptide repeat-containing protein At3g09650,
            chloroplastic-like [Citrus sinensis]
            gi|557530935|gb|ESR42118.1| hypothetical protein
            CICLE_v10011148mg [Citrus clementina]
          Length = 740

 Score =  323 bits (827), Expect = 1e-85
 Identities = 158/315 (50%), Positives = 223/315 (70%), Gaps = 6/315 (1%)
 Frame = -3

Query: 1328 PDHMTYTTAISAFVRMDMINEAHALLQEMAMQGLNANHLTYNTLLNGYCVLQKMKKAKQL 1149
            PDH+TYTT +SA V+   ++ A  +L EM   G+ AN +TYN LL GYC   ++ KAK+L
Sbjct: 406  PDHVTYTTVVSALVKAGSMDRARQVLAEMTRIGVPANRITYNILLKGYCQQLQIDKAKEL 465

Query: 1148 IEEMRD-AGIVPDIVTYNTLINGCIEAMDNVSALEYFDEMKKAAVRPSEITYTILMKAFA 972
            + EM D A I PD+V+YN LI+G I   D+  AL +F+EM+   + P++I+YT LMKAFA
Sbjct: 466  LREMADDAKIEPDVVSYNILIDGFILIDDSAGALTFFNEMRARGIAPTKISYTTLMKAFA 525

Query: 971  RAGQPKNATKVFDELLRDPQIKVDLPAWNMLLESYCMAGMVETAKLVMQQMREKKIDPNA 792
             + QPK A KVFDE+LRDP++KVD+ AWNML+E YC  G+VE AK ++++M+E    PN 
Sbjct: 526  LSSQPKLANKVFDEMLRDPRVKVDIVAWNMLVEGYCRMGLVEEAKRIIERMKENGFYPNV 585

Query: 791  SSYGSFVKGLNIARRPVETLDLWESIKDRIDLKLQNTNVQ-----PLKPDKGLLDSFLEI 627
            ++YGS   G+++AR+P E L LW+ IK+R ++K +  N       PLKPD+ LLD+  +I
Sbjct: 586  ATYGSLANGISLARKPGEALLLWKEIKERCEVKKEGVNADSDLPPPLKPDEELLDALADI 645

Query: 626  FVRSAYFSKALEVLAFMEGYKFPVNKEKYRKMFRKYHSGIYTSKHKSLVRQNARLDKKRA 447
             VR+A+F KALE++A ME +  P NK KY+K++ + HS ++TSKH S  RQ+ R ++KRA
Sbjct: 646  CVRAAFFRKALEIVACMEEHGIPPNKTKYKKIYVEMHSRMFTSKHASQARQDRRRERKRA 705

Query: 446  AEAFKLWVGLPNVYH 402
            AEAFK W+GLPN Y+
Sbjct: 706  AEAFKFWLGLPNSYY 720



 Score = 60.1 bits (144), Expect = 2e-06
 Identities = 56/260 (21%), Positives = 106/260 (40%), Gaps = 13/260 (5%)
 Frame = -3

Query: 1208 YNTLLNGYCVLQKMKKAKQLIEEMRDAGIVPDIVTYNTLINGCIEAMDNVSALEYFDEMK 1029
            YN +LN    L K KK  QL ++M + G  PD++TYN +I  C  A      +   + + 
Sbjct: 220  YNAVLNACANLGKPKKFLQLFDQMHEFGAKPDVLTYNVMIKLCARARRKHLLVFLLERIL 279

Query: 1028 KAAVRPSEITYTILMKAFARAGQPKNATKVFDELLRDPQIKVDLPAWNMLLESYCMAGMV 849
            +  +     T+  L+ A+   G  + A  +  + +R+ +  +      + LE Y      
Sbjct: 280  EMGIPLCMTTFQSLVAAYVGFGDLEIAESIV-QAMREGRRDLCKIIRELDLEDYSSENEG 338

Query: 848  ETAKLVMQQMREKKID-------------PNASSYGSFVKGLNIARRPVETLDLWESIKD 708
            +    V +++    I+             PN+  Y + +KG     R  +T+ +  +++ 
Sbjct: 339  DDDDEVFEKLLPNSINPSSEPPLLPKTFAPNSRIYTTLMKGYMNEGRVSDTVRMLGAMRR 398

Query: 707  RIDLKLQNTNVQPLKPDKGLLDSFLEIFVRSAYFSKALEVLAFMEGYKFPVNKEKYRKMF 528
            + D            PD     + +   V++    +A +VLA M     P N+  Y  + 
Sbjct: 399  QED--------DASHPDHVTYTTVVSALVKAGSMDRARQVLAEMTRIGVPANRITYNILL 450

Query: 527  RKYHSGIYTSKHKSLVRQNA 468
            + Y   +   K K L+R+ A
Sbjct: 451  KGYCQQLQIDKAKELLREMA 470


>ref|XP_004306228.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09650,
            chloroplastic-like [Fragaria vesca subsp. vesca]
          Length = 743

 Score =  322 bits (826), Expect = 2e-85
 Identities = 157/316 (49%), Positives = 221/316 (69%), Gaps = 6/316 (1%)
 Frame = -3

Query: 1331 RPDHMTYTTAISAFVRMDMINEAHALLQEMAMQGLNANHLTYNTLLNGYCVLQKMKKAKQ 1152
            +PDH+TYTT +SAFV+   ++ A  +L EM   G+ AN +TYN LL GYC   ++ +AK+
Sbjct: 415  QPDHVTYTTVVSAFVKAGSMDRARRVLAEMTRVGVPANRITYNILLKGYCQQLQIDQAKE 474

Query: 1151 LIEEM-RDAGIVPDIVTYNTLINGCIEAMDNVSALEYFDEMKKAAVRPSEITYTILMKAF 975
            L+ EM  DAGI PD+V+YN LI+GCI+  D+  AL +F+EM+   + P++I+YT LMKAF
Sbjct: 475  LVREMTEDAGIEPDVVSYNILIDGCIQVDDSARALAFFNEMRAKGIAPTKISYTTLMKAF 534

Query: 974  ARAGQPKNATKVFDELLRDPQIKVDLPAWNMLLESYCMAGMVETAKLVMQQMREKKIDPN 795
            A +GQPK A KVFDE+L DP++K DL AWNML+E YC  G+VE +K ++Q+M+E    P+
Sbjct: 535  ALSGQPKLANKVFDEMLNDPRVKADLVAWNMLVEGYCRLGLVEESKKIIQRMKEHGFHPD 594

Query: 794  ASSYGSFVKGLNIARRPVETLDLWESIKDRIDLKLQ-----NTNVQPLKPDKGLLDSFLE 630
             ++YGS   G+ +AR+P E L LW  +KDR   K +     + +   LKPD+GLLD   +
Sbjct: 595  VATYGSLANGIALARKPGEALLLWNEVKDRCTAKKEGEKSDDADPPTLKPDEGLLDILAD 654

Query: 629  IFVRSAYFSKALEVLAFMEGYKFPVNKEKYRKMFRKYHSGIYTSKHKSLVRQNARLDKKR 450
            I VR+A+F KALE++A ME    P NK K+ K++ + HS ++TSKH S  RQ+ R ++KR
Sbjct: 655  ICVRAAFFKKALEIVACMEENGIPPNKTKFTKIYVEMHSRMFTSKHASQARQDRRSERKR 714

Query: 449  AAEAFKLWVGLPNVYH 402
            AAEAFK W+GLPN Y+
Sbjct: 715  AAEAFKFWLGLPNSYY 730



 Score = 76.3 bits (186), Expect = 3e-11
 Identities = 64/277 (23%), Positives = 111/277 (40%), Gaps = 46/277 (16%)
 Frame = -3

Query: 1166 KKAKQLIEEMRDAGIVPDIVTYNTLINGCIEAMDNVSALEYFDEMKKAAVRPSEITYTIL 987
            ++ ++  E    A   PD   +N  +N C    D+   L+ FDEM ++   P  +TY ++
Sbjct: 211  RRVRRFAEPELVADSRPDTAAFNAALNACANLGDSDRFLKLFDEMPESGAEPDVLTYNVM 270

Query: 986  MKAFARAGQPKNATKVFDELLRDPQIKVDLPAWNMLLESYCMAGMVETAKLVMQQMREKK 807
            +K  AR G+      V + +L D  I V +   N L+ +Y   G +ETA+ ++Q MRE +
Sbjct: 271  IKLCARVGRKDLLVFVLERIL-DQGITVCMTTLNSLVAAYVGFGDLETAEKMVQAMREGR 329

Query: 806  ID----------------------------------------------PNASSYGSFVKG 765
             D                                               N+  Y + +KG
Sbjct: 330  RDLCKILREANLRNSNSSGRDGNVFEKLLPNSVTASECEPPLLPKAYTANSRIYTTLMKG 389

Query: 764  LNIARRPVETLDLWESIKDRIDLKLQNTNVQPLKPDKGLLDSFLEIFVRSAYFSKALEVL 585
               A R ++T+ + E+++ + D   Q        PD     + +  FV++    +A  VL
Sbjct: 390  YMNAGRVIDTVRMLEALRHQDDSSSQ--------PDHVTYTTVVSAFVKAGSMDRARRVL 441

Query: 584  AFMEGYKFPVNKEKYRKMFRKYHSGIYTSKHKSLVRQ 474
            A M     P N+  Y  + + Y   +   + K LVR+
Sbjct: 442  AEMTRVGVPANRITYNILLKGYCQQLQIDQAKELVRE 478



 Score = 72.8 bits (177), Expect = 3e-10
 Identities = 45/163 (27%), Positives = 79/163 (48%), Gaps = 3/163 (1%)
 Frame = -3

Query: 1223 ANHLTYNTLLNGYCVLQKMKKAKQLIEEMR---DAGIVPDIVTYNTLINGCIEAMDNVSA 1053
            AN   Y TL+ GY    ++    +++E +R   D+   PD VTY T+++  ++A     A
Sbjct: 378  ANSRIYTTLMKGYMNAGRVIDTVRMLEALRHQDDSSSQPDHVTYTTVVSAFVKAGSMDRA 437

Query: 1052 LEYFDEMKKAAVRPSEITYTILMKAFARAGQPKNATKVFDELLRDPQIKVDLPAWNMLLE 873
                 EM +  V  + ITY IL+K + +  Q   A ++  E+  D  I+ D+ ++N+L++
Sbjct: 438  RRVLAEMTRVGVPANRITYNILLKGYCQQLQIDQAKELVREMTEDAGIEPDVVSYNILID 497

Query: 872  SYCMAGMVETAKLVMQQMREKKIDPNASSYGSFVKGLNIARRP 744
                      A     +MR K I P   SY + +K   ++ +P
Sbjct: 498  GCIQVDDSARALAFFNEMRAKGIAPTKISYTTLMKAFALSGQP 540


>gb|EMJ07627.1| hypothetical protein PRUPE_ppa001926mg [Prunus persica]
          Length = 740

 Score =  322 bits (825), Expect = 2e-85
 Identities = 157/315 (49%), Positives = 222/315 (70%), Gaps = 6/315 (1%)
 Frame = -3

Query: 1328 PDHMTYTTAISAFVRMDMINEAHALLQEMAMQGLNANHLTYNTLLNGYCVLQKMKKAKQL 1149
            PDH+TYTT ISAFV+   ++ A  +L EM   G+ AN +TYN LL GYC   ++ +AK+L
Sbjct: 413  PDHVTYTTVISAFVKAGSMDRARRVLAEMTRVGVPANRITYNILLKGYCQQLQIDQAKEL 472

Query: 1148 IEEMRD-AGIVPDIVTYNTLINGCIEAMDNVSALEYFDEMKKAAVRPSEITYTILMKAFA 972
            + EM D AGI PD+V+YN LI+GCI   D+  AL +F+EM+   + P++I+YT LMKAFA
Sbjct: 473  LREMADDAGIEPDVVSYNILIDGCILVDDSAGALGFFNEMRTRGLAPTKISYTTLMKAFA 532

Query: 971  RAGQPKNATKVFDELLRDPQIKVDLPAWNMLLESYCMAGMVETAKLVMQQMREKKIDPNA 792
             +GQPK A KVFDE+L DP++K DL AWNML+E+YC  G+VE AK ++Q++++    P+ 
Sbjct: 533  LSGQPKLANKVFDEMLNDPRVKADLVAWNMLVEAYCRMGLVEEAKKIIQRIKDNGFHPDV 592

Query: 791  SSYGSFVKGLNIARRPVETLDLWESIKDRIDLKLQNTNVQP-----LKPDKGLLDSFLEI 627
            ++YGS   G+ +AR+P E L LW  +K+R  +K +     P     LKPD+GLLD+  +I
Sbjct: 593  ATYGSLANGIALARKPGEALLLWNEVKERCRVKKEGETSDPSDPPTLKPDEGLLDTLADI 652

Query: 626  FVRSAYFSKALEVLAFMEGYKFPVNKEKYRKMFRKYHSGIYTSKHKSLVRQNARLDKKRA 447
             VR+A+F KALE++A ME    P NK K+ K++ + HS ++TSKH S  RQ+ R+++KRA
Sbjct: 653  CVRAAFFKKALEIVACMEENGIPPNKTKFTKIYVEMHSRMFTSKHASQARQDRRIERKRA 712

Query: 446  AEAFKLWVGLPNVYH 402
            AEAFK W+GLPN Y+
Sbjct: 713  AEAFKFWLGLPNSYY 727



 Score = 69.7 bits (169), Expect = 3e-09
 Identities = 43/162 (26%), Positives = 80/162 (49%), Gaps = 3/162 (1%)
 Frame = -3

Query: 1220 NHLTYNTLLNGYCVLQKMKKAKQLIEEMR---DAGIVPDIVTYNTLINGCIEAMDNVSAL 1050
            N   Y TL+ GY  + ++    +++E +R   D+   PD VTY T+I+  ++A     A 
Sbjct: 376  NSRIYTTLMKGYMNVGRVTDTVRMLEALRHQDDSSSHPDHVTYTTVISAFVKAGSMDRAR 435

Query: 1049 EYFDEMKKAAVRPSEITYTILMKAFARAGQPKNATKVFDELLRDPQIKVDLPAWNMLLES 870
                EM +  V  + ITY IL+K + +  Q   A ++  E+  D  I+ D+ ++N+L++ 
Sbjct: 436  RVLAEMTRVGVPANRITYNILLKGYCQQLQIDQAKELLREMADDAGIEPDVVSYNILIDG 495

Query: 869  YCMAGMVETAKLVMQQMREKKIDPNASSYGSFVKGLNIARRP 744
              +      A     +MR + + P   SY + +K   ++ +P
Sbjct: 496  CILVDDSAGALGFFNEMRTRGLAPTKISYTTLMKAFALSGQP 537



 Score = 68.9 bits (167), Expect = 4e-09
 Identities = 60/263 (22%), Positives = 101/263 (38%), Gaps = 46/263 (17%)
 Frame = -3

Query: 1118 PDIVTYNTLINGCIEAMDNVSALEYFDEMKKAAVRPSEITYTILMKAFARAGQPKNATKV 939
            PD   +N  +N C    D    L+ FDEM +    P  +TY +++K  AR G+      V
Sbjct: 224  PDTAAFNAALNACANLGDTKRFLKLFDEMPEYGAEPDVLTYNVMIKLCARVGRKDLLVFV 283

Query: 938  FDELLRDPQIKVDLPAWNMLLESYCMAGMVETAKLVMQQMREKKID-------------- 801
             + +L D  I + L   N L+ +Y   G +ETA+ ++Q MRE + D              
Sbjct: 284  LERIL-DKGITLCLTTLNSLVAAYVGFGDLETAEQMVQAMREGRRDLCKILRDLNSNNSK 342

Query: 800  --------------------------------PNASSYGSFVKGLNIARRPVETLDLWES 717
                                             N+  Y + +KG     R  +T+ + E+
Sbjct: 343  SSLSDGDVFEKLLPNSVRANDCEPPLLPKAYTCNSRIYTTLMKGYMNVGRVTDTVRMLEA 402

Query: 716  IKDRIDLKLQNTNVQPLKPDKGLLDSFLEIFVRSAYFSKALEVLAFMEGYKFPVNKEKYR 537
            ++ + D            PD     + +  FV++    +A  VLA M     P N+  Y 
Sbjct: 403  LRHQDD--------SSSHPDHVTYTTVISAFVKAGSMDRARRVLAEMTRVGVPANRITYN 454

Query: 536  KMFRKYHSGIYTSKHKSLVRQNA 468
             + + Y   +   + K L+R+ A
Sbjct: 455  ILLKGYCQQLQIDQAKELLREMA 477


>ref|XP_002322855.2| hypothetical protein POPTR_0016s08650g [Populus trichocarpa]
            gi|550321129|gb|EEF04616.2| hypothetical protein
            POPTR_0016s08650g [Populus trichocarpa]
          Length = 724

 Score =  322 bits (824), Expect = 3e-85
 Identities = 158/317 (49%), Positives = 226/317 (71%), Gaps = 7/317 (2%)
 Frame = -3

Query: 1331 RPDHMTYTTAISAFVRMDMINEAHALLQEMAMQGLNANHLTYNTLLNGYCVLQKMKKAKQ 1152
            +PDH+TYTT ISA V+   ++ A  +L EM   G+ AN +TYN LL GYC   ++ KAK+
Sbjct: 395  QPDHITYTTVISALVKAGSMDPARQVLAEMTRIGVPANRITYNILLKGYCQQLQIDKAKE 454

Query: 1151 LIEEMRD-AGIVPDIVTYNTLINGCIEAMDNVSALEYFDEMKKAAVRPSEITYTILMKAF 975
            L++EM D   I PD+V+YNTLI+GCI   D+  AL +F+EM+   + P++I+YT LMKAF
Sbjct: 455  LLKEMADDVNIEPDVVSYNTLIDGCILVDDSAGALAFFNEMRTKGIMPTKISYTTLMKAF 514

Query: 974  ARAGQPKNATKVFDELLRDPQIKVDLPAWNMLLESYCMAGMVETAKLVMQQMREKKIDPN 795
            A +GQPK A KVFDE+L+DP++K DL AWNMLLE YC  G+V+ AK V+Q+M+E    P+
Sbjct: 515  ALSGQPKLANKVFDEMLKDPRVKADLVAWNMLLEGYCRLGLVDEAKTVIQRMKENGFHPD 574

Query: 794  ASSYGSFVKGLNIARRPVETLDLWESIKDRIDLKLQ------NTNVQPLKPDKGLLDSFL 633
             ++YGS   G+++AR+P E L LW+ +K+R ++K +      ++ + PLKPD+ LL +  
Sbjct: 575  VATYGSLANGISLARKPGEALLLWKEVKERWEVKGEGESSNSDSPLLPLKPDEELLATLA 634

Query: 632  EIFVRSAYFSKALEVLAFMEGYKFPVNKEKYRKMFRKYHSGIYTSKHKSLVRQNARLDKK 453
            +I VR+A+F KALE++A ME    P NK KY+K++ + HS ++TSKH S  RQ+ R ++K
Sbjct: 635  DICVRAAFFQKALEIVACMEENGIPPNKTKYKKIYVEMHSRMFTSKHASQARQDRRRERK 694

Query: 452  RAAEAFKLWVGLPNVYH 402
            RAAEAFK W+GLPN Y+
Sbjct: 695  RAAEAFKFWLGLPNSYY 711


>ref|XP_006296758.1| hypothetical protein CARUB_v10015405mg [Capsella rubella]
            gi|482565467|gb|EOA29656.1| hypothetical protein
            CARUB_v10015405mg [Capsella rubella]
          Length = 781

 Score =  322 bits (824), Expect = 3e-85
 Identities = 155/318 (48%), Positives = 225/318 (70%), Gaps = 9/318 (2%)
 Frame = -3

Query: 1328 PDHMTYTTAISAFVRMDMINEAHALLQEMAMQGLNANHLTYNTLLNGYCVLQKMKKAKQL 1149
            PD +TYTT +SAFV+  +++ A  +L EMA  G+ AN +TYN LL GYC   ++ +A+ L
Sbjct: 453  PDEVTYTTVVSAFVKAGLMDRARQVLAEMARMGVPANRITYNVLLKGYCKQLQIDRAEDL 512

Query: 1148 IEEM-RDAGIVPDIVTYNTLINGCIEAMDNVSALEYFDEMKKAAVRPSEITYTILMKAFA 972
            + EM  DAG+ PD+V+YN +I+GCI   D+  AL +F+EM+   + P++I+YT LMKAFA
Sbjct: 513  LREMAEDAGVEPDVVSYNIIIDGCILIDDSAGALAFFNEMRTRGIAPTKISYTTLMKAFA 572

Query: 971  RAGQPKNATKVFDELLRDPQIKVDLPAWNMLLESYCMAGMVETAKLVMQQMREKKIDPNA 792
             +GQPK A +VFDE++ DP++KVDL AWNML+E YC  G++E A+ V+ +M+E    PN 
Sbjct: 573  MSGQPKLANRVFDEMMNDPRVKVDLIAWNMLVEGYCRLGLIEDAQRVVSRMKENGFYPNV 632

Query: 791  SSYGSFVKGLNIARRPVETLDLWESIKDRIDLK--------LQNTNVQPLKPDKGLLDSF 636
            S+YGS   G+++AR+P E L LW+ IK+R ++K          N++   LKPD+GLLD+ 
Sbjct: 633  STYGSLANGVSLARKPGEALLLWKEIKERCEVKKNEALSDSSSNSSPPMLKPDEGLLDTL 692

Query: 635  LEIFVRSAYFSKALEVLAFMEGYKFPVNKEKYRKMFRKYHSGIYTSKHKSLVRQNARLDK 456
             +I VR+A+F KALE++A ME    P NK KY+K++ + HS ++TSKH S  R + R+++
Sbjct: 693  ADICVRAAFFKKALEIIACMEENGIPPNKTKYKKIYVEMHSRMFTSKHASQARIDRRVER 752

Query: 455  KRAAEAFKLWVGLPNVYH 402
            KRAAEAFK W+GLPN Y+
Sbjct: 753  KRAAEAFKFWLGLPNSYY 770


>ref|XP_006361774.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09650,
            chloroplastic-like [Solanum tuberosum]
          Length = 738

 Score =  321 bits (823), Expect = 4e-85
 Identities = 155/314 (49%), Positives = 221/314 (70%), Gaps = 5/314 (1%)
 Frame = -3

Query: 1328 PDHMTYTTAISAFVRMDMINEAHALLQEMAMQGLNANHLTYNTLLNGYCVLQKMKKAKQL 1149
            PDH+TYTT ISAFV+  +++ A  +L EM   G+ AN +TYN L+ GYC    +  A++L
Sbjct: 408  PDHVTYTTVISAFVKQGLMDRAREVLAEMVRIGVPANRVTYNVLIKGYCQQLHIDMAEEL 467

Query: 1148 IEEMRDAGIVPDIVTYNTLINGCIEAMDNVSALEYFDEMKKAAVRPSEITYTILMKAFAR 969
            I+EM D GI PD+V+YNT+I+GCI   D   AL YF+EM+   + P++++YT LMKAFA 
Sbjct: 468  IKEMIDTGIEPDVVSYNTIIDGCILVDDCAGALSYFNEMRARGIAPTKVSYTTLMKAFAS 527

Query: 968  AGQPKNATKVFDELLRDPQIKVDLPAWNMLLESYCMAGMVETAKLVMQQMREKKIDPNAS 789
            +GQ K A KVFDE+L+DP++KVDL AWNML+++Y   G VE AK V+++M+E    PN +
Sbjct: 528  SGQAKLANKVFDEMLKDPRVKVDLVAWNMLVDAYSKLGKVEEAKSVIERMKENGFYPNVA 587

Query: 788  SYGSFVKGLNIARRPVETLDLWESIKDRIDL-----KLQNTNVQPLKPDKGLLDSFLEIF 624
            +YGS   G+ +AR+P E L LW  IK R  +      + ++ V PL+PD+GLLD+  +I 
Sbjct: 588  TYGSLANGIALARKPGEALLLWNEIKQRCGMGNGEESIPSSGVPPLEPDEGLLDTLADIC 647

Query: 623  VRSAYFSKALEVLAFMEGYKFPVNKEKYRKMFRKYHSGIYTSKHKSLVRQNARLDKKRAA 444
            VR+A+F KALE++A ME +  P NK K+ +++ + HS ++TSKH S  RQ+ R ++KRAA
Sbjct: 648  VRAAFFKKALEIVACMEQHGIPPNKTKFTRIYVEMHSRMFTSKHASRARQDRRKERKRAA 707

Query: 443  EAFKLWVGLPNVYH 402
            EAFK W+GLPN Y+
Sbjct: 708  EAFKFWLGLPNSYY 721



 Score = 58.2 bits (139), Expect = 8e-06
 Identities = 40/154 (25%), Positives = 74/154 (48%), Gaps = 3/154 (1%)
 Frame = -3

Query: 1220 NHLTYNTLLNGYCVLQKMKKAKQLIEEMR---DAGIVPDIVTYNTLINGCIEAMDNVSAL 1050
            N   Y TL+ GY    ++    +++E MR   D+   PD VTY T+I+  ++      A 
Sbjct: 371  NSRMYTTLMKGYMNAGRVTDMVRMLEAMRHLGDSESHPDHVTYTTVISAFVKQGLMDRAR 430

Query: 1049 EYFDEMKKAAVRPSEITYTILMKAFARAGQPKNATKVFDELLRDPQIKVDLPAWNMLLES 870
            E   EM +  V  + +TY +L+K + +      A ++  E++ D  I+ D+ ++N +++ 
Sbjct: 431  EVLAEMVRIGVPANRVTYNVLIKGYCQQLHIDMAEELIKEMI-DTGIEPDVVSYNTIIDG 489

Query: 869  YCMAGMVETAKLVMQQMREKKIDPNASSYGSFVK 768
              +      A     +MR + I P   SY + +K
Sbjct: 490  CILVDDCAGALSYFNEMRARGIAPTKVSYTTLMK 523


>ref|XP_004137961.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09650,
            chloroplastic-like [Cucumis sativus]
            gi|449483612|ref|XP_004156638.1| PREDICTED:
            pentatricopeptide repeat-containing protein At3g09650,
            chloroplastic-like [Cucumis sativus]
          Length = 736

 Score =  321 bits (823), Expect = 4e-85
 Identities = 157/314 (50%), Positives = 222/314 (70%), Gaps = 5/314 (1%)
 Frame = -3

Query: 1328 PDHMTYTTAISAFVRMDMINEAHALLQEMAMQGLNANHLTYNTLLNGYCVLQKMKKAKQL 1149
            PDH++YTT +SA V+   ++ A  +L EM   G  AN +TYN LL GYC L +M KAK L
Sbjct: 410  PDHVSYTTVVSALVKAGSMDRARQVLAEMTRIGCPANRITYNILLKGYCRLLQMDKAKDL 469

Query: 1148 IEEMRD-AGIVPDIVTYNTLINGCIEAMDNVSALEYFDEMKKAAVRPSEITYTILMKAFA 972
             +EM D AGI PD+V+YN +I+G I   D+  AL +F+EM+   + P++++YT LMKAFA
Sbjct: 470  FKEMVDGAGIEPDVVSYNIMIDGSILVDDSAGALGFFNEMRSKGIAPTKVSYTTLMKAFA 529

Query: 971  RAGQPKNATKVFDELLRDPQIKVDLPAWNMLLESYCMAGMVETAKLVMQQMREKKIDPNA 792
            ++GQPK A KVFDE+L DP++KVD+ AWNML+E YC  G +E AK ++Q+M+E    P+ 
Sbjct: 530  QSGQPKLARKVFDEMLNDPRVKVDIVAWNMLIEGYCRLGWIEEAKQLVQKMKENGFFPDV 589

Query: 791  SSYGSFVKGLNIARRPVETLDLWESIKDRIDL----KLQNTNVQPLKPDKGLLDSFLEIF 624
            S+YGS   G+++AR+P E L LW  +K+R  +    K  +++  PLKPD+GLLD+  +I 
Sbjct: 590  STYGSLANGISLARKPGEALLLWNEVKERCAVRRGYKSDSSSPPPLKPDEGLLDTLADIC 649

Query: 623  VRSAYFSKALEVLAFMEGYKFPVNKEKYRKMFRKYHSGIYTSKHKSLVRQNARLDKKRAA 444
            VR+A+F KALE++A ME    P NK KY +++ + HS ++TSKH S  RQ+ R++KKRAA
Sbjct: 650  VRAAFFRKALEIVACMEENGIPPNKTKYSRIYVEMHSRMFTSKHASKARQDRRIEKKRAA 709

Query: 443  EAFKLWVGLPNVYH 402
            EAFK W+GLPN Y+
Sbjct: 710  EAFKFWLGLPNSYY 723


>emb|CBI32614.3| unnamed protein product [Vitis vinifera]
          Length = 723

 Score =  320 bits (821), Expect = 6e-85
 Identities = 159/311 (51%), Positives = 217/311 (69%), Gaps = 1/311 (0%)
 Frame = -3

Query: 1331 RPDHMTYTTAISAFVRMDMINEAHALLQEMAMQGLNANHLTYNTLLNGYCVLQKMKKAKQ 1152
            +PDH+TYTT +SA V+   ++ A  +L EM   G+ AN +TYN LL GYC   ++ KAK+
Sbjct: 396  QPDHVTYTTVVSALVKAGSMDRARQVLAEMTRIGVPANRVTYNILLKGYCEQLQIDKAKE 455

Query: 1151 LIEEM-RDAGIVPDIVTYNTLINGCIEAMDNVSALEYFDEMKKAAVRPSEITYTILMKAF 975
            L+ EM  D GIVPD+V+YNTLI+GCI   D+  AL YF+EM+   + P++I+YT LMKAF
Sbjct: 456  LVREMVDDEGIVPDVVSYNTLIDGCILVDDSAGALAYFNEMRARGIAPTKISYTTLMKAF 515

Query: 974  ARAGQPKNATKVFDELLRDPQIKVDLPAWNMLLESYCMAGMVETAKLVMQQMREKKIDPN 795
            A +GQPK A KVFDE+LRDP++KVDL AWNML+E++C  G+VE AK  +Q+MRE    PN
Sbjct: 516  ALSGQPKLANKVFDEMLRDPRVKVDLVAWNMLVEAHCRLGLVEEAKKTVQRMRENGFYPN 575

Query: 794  ASSYGSFVKGLNIARRPVETLDLWESIKDRIDLKLQNTNVQPLKPDKGLLDSFLEIFVRS 615
             ++YGS   G+ +AR+P E L LW  +K+R              PD+GLLD+  +I VR+
Sbjct: 576  VATYGSLANGIALARKPGEALLLWNEVKERC-------------PDEGLLDTLADICVRA 622

Query: 614  AYFSKALEVLAFMEGYKFPVNKEKYRKMFRKYHSGIYTSKHKSLVRQNARLDKKRAAEAF 435
            A+F KALE++A ME    P NK KY +++ + HS ++TSKH S  RQ+ R ++KRAAEAF
Sbjct: 623  AFFRKALEIVACMEENGIPPNKSKYTRIYVEMHSRMFTSKHASKARQDRRSERKRAAEAF 682

Query: 434  KLWVGLPNVYH 402
            K W+GLPN Y+
Sbjct: 683  KFWLGLPNSYY 693



 Score = 81.3 bits (199), Expect = 9e-13
 Identities = 62/245 (25%), Positives = 108/245 (44%), Gaps = 20/245 (8%)
 Frame = -3

Query: 1148 IEEMRDAGIV----PDIVTYNTLINGCIEAMDNVSALEYFDEMKKAAVRPSEITYTILMK 981
            I    DA +V    PD   YN ++N C    D    L+ F+EM +    P  +TY +++K
Sbjct: 224  IHRFTDATLVADSRPDTAAYNAVLNACANLGDTKRFLQVFEEMTQLGAEPDVLTYNVMIK 283

Query: 980  AFARAGQPKNATKVFDELLRDPQIKVDLPAWNMLLESYCMAGMVETAKLVMQQMREKKID 801
              AR  +      V + +L D  I++ +   + L+ +Y   G +ETA+ ++Q MRE + D
Sbjct: 284  LCARVDRKDLLVFVLERIL-DKGIQLCMTTLHSLVAAYVGFGDLETAEKLVQAMREGRQD 342

Query: 800  ----------------PNASSYGSFVKGLNIARRPVETLDLWESIKDRIDLKLQNTNVQP 669
                            P++  Y + +KG     R  +T+ + E+++ + D   Q      
Sbjct: 343  LCKILRDVNSENPAYAPDSRIYTTLMKGYMKEGRVTDTVRMLEAMRHQDDSTSQ------ 396

Query: 668  LKPDKGLLDSFLEIFVRSAYFSKALEVLAFMEGYKFPVNKEKYRKMFRKYHSGIYTSKHK 489
              PD     + +   V++    +A +VLA M     P N+  Y  + + Y   +   K K
Sbjct: 397  --PDHVTYTTVVSALVKAGSMDRARQVLAEMTRIGVPANRVTYNILLKGYCEQLQIDKAK 454

Query: 488  SLVRQ 474
             LVR+
Sbjct: 455  ELVRE 459



 Score = 70.1 bits (170), Expect = 2e-09
 Identities = 53/212 (25%), Positives = 96/212 (45%), Gaps = 24/212 (11%)
 Frame = -3

Query: 1328 PDHMTYTTAISAFVRMDMINEAHALLQEMAMQGLNANHLTYNTLLNGYCVLQKMKKAKQL 1149
            PD +TY   I    R+D  +    +L+ +  +G+     T ++L+  Y     ++ A++L
Sbjct: 273  PDVLTYNVMIKLCARVDRKDLLVFVLERILDKGIQLCMTTLHSLVAAYVGFGDLETAEKL 332

Query: 1148 IEEMRDA----------------GIVPDIVTYNTLINGCIE---AMDNVSALEYFDEMKK 1026
            ++ MR+                    PD   Y TL+ G ++     D V  LE       
Sbjct: 333  VQAMREGRQDLCKILRDVNSENPAYAPDSRIYTTLMKGYMKEGRVTDTVRMLEAMRHQDD 392

Query: 1025 AAVRPSEITYTILMKAFARAGQPKNATKVFDELLRDPQIKVDLPA----WNMLLESYCMA 858
            +  +P  +TYT ++ A  +AG    A +V  E+ R     + +PA    +N+LL+ YC  
Sbjct: 393  STSQPDHVTYTTVVSALVKAGSMDRARQVLAEMTR-----IGVPANRVTYNILLKGYCEQ 447

Query: 857  GMVETAK-LVMQQMREKKIDPNASSYGSFVKG 765
              ++ AK LV + + ++ I P+  SY + + G
Sbjct: 448  LQIDKAKELVREMVDDEGIVPDVVSYNTLIDG 479


>ref|XP_002882632.1| HCF152 [Arabidopsis lyrata subsp. lyrata] gi|297328472|gb|EFH58891.1|
            HCF152 [Arabidopsis lyrata subsp. lyrata]
          Length = 772

 Score =  319 bits (817), Expect = 2e-84
 Identities = 155/318 (48%), Positives = 227/318 (71%), Gaps = 9/318 (2%)
 Frame = -3

Query: 1328 PDHMTYTTAISAFVRMDMINEAHALLQEMAMQGLNANHLTYNTLLNGYCVLQKMKKAKQL 1149
            PD +TYTT +SAFV+  +++ A  +L EMA  G+ AN +TYN LL GYC   ++ +A+ L
Sbjct: 444  PDEVTYTTVVSAFVKAGLMDRARQVLAEMARMGVPANRITYNVLLKGYCKQLQIDRAEDL 503

Query: 1148 IEEM-RDAGIVPDIVTYNTLINGCIEAMDNVSALEYFDEMKKAAVRPSEITYTILMKAFA 972
            + EM  DAGI PD+V+YN +I+GCI   D+  AL +F+EM+   + P++I+YT LMKAFA
Sbjct: 504  LREMAEDAGIEPDVVSYNIIIDGCILIDDSAGALAFFNEMRTRGIAPTKISYTTLMKAFA 563

Query: 971  RAGQPKNATKVFDELLRDPQIKVDLPAWNMLLESYCMAGMVETAKLVMQQMREKKIDPNA 792
             +GQPK A +VFDE++ DP++KVDL AWNML+E YC  G++E A+ V+ +M+E    PN 
Sbjct: 564  MSGQPKLANRVFDEMMNDPRVKVDLIAWNMLVEGYCRLGLIEDAQRVVSRMKENGFYPNV 623

Query: 791  SSYGSFVKGLNIARRPVETLDLWESIKDRIDLKLQ----NTNVQP----LKPDKGLLDSF 636
            ++YGS   G+++AR+P E L LW+ IK+R ++K +    +++  P    LKPD+GLLD+ 
Sbjct: 624  ATYGSLANGVSLARKPGEALLLWKEIKERCEVKKKEAPSDSSSDPSPPMLKPDEGLLDTL 683

Query: 635  LEIFVRSAYFSKALEVLAFMEGYKFPVNKEKYRKMFRKYHSGIYTSKHKSLVRQNARLDK 456
             +I VR+A+F KALE++A ME    P NK KY+K++ + HS ++TSKH S  R + R+++
Sbjct: 684  ADICVRAAFFKKALEIIACMEENGIPPNKTKYKKIYVEMHSRMFTSKHASQARIDRRVER 743

Query: 455  KRAAEAFKLWVGLPNVYH 402
            KRAAEAFK W+GLPN Y+
Sbjct: 744  KRAAEAFKFWLGLPNSYY 761



 Score = 60.1 bits (144), Expect = 2e-06
 Identities = 34/122 (27%), Positives = 62/122 (50%)
 Frame = -3

Query: 1166 KKAKQLIEEMRDAGIVPDIVTYNTLINGCIEAMDNVSALEYFDEMKKAAVRPSEITYTIL 987
            ++ K+  ++   A   PD   +N ++N C    D     + FDEM +    P  +TY ++
Sbjct: 211  RRVKRFGDQSLVAQSRPDTAAFNAVLNACANLGDTEKYWKLFDEMSEWDCEPDVLTYNVM 270

Query: 986  MKAFARAGQPKNATKVFDELLRDPQIKVDLPAWNMLLESYCMAGMVETAKLVMQQMREKK 807
            +K  AR  + +    V + ++ D  IKV +   + L+ +Y   G + TA+ ++Q MREK+
Sbjct: 271  IKLCARVDRKELIVYVLERII-DKGIKVCMTTMHSLVAAYVGFGDLRTAERIVQAMREKR 329

Query: 806  ID 801
             D
Sbjct: 330  RD 331


>gb|ESW16523.1| hypothetical protein PHAVU_007G163500g [Phaseolus vulgaris]
          Length = 713

 Score =  315 bits (806), Expect = 4e-83
 Identities = 154/315 (48%), Positives = 225/315 (71%), Gaps = 5/315 (1%)
 Frame = -3

Query: 1328 PDHMTYTTAISAFVRMDMINEAHALLQEMAMQGLNANHLTYNTLLNGYCVLQKMKKAKQL 1149
            PDH++YTT +SA V++  ++ A  +L EM   G+ AN +TYN LL GYC   ++ KAK+L
Sbjct: 380  PDHVSYTTVVSALVKVGSMDRAREVLAEMTRIGVPANLITYNILLKGYCKQLQINKAKEL 439

Query: 1148 IEEM-RDAGIVPDIVTYNTLINGCIEAMDNVSALEYFDEMKKAAVRPSEITYTILMKAFA 972
            ++EM  DAGI  D+V+YN LI+GCI   D+  AL +F+EM+   + P++I+YT LMKAFA
Sbjct: 440  LKEMVDDAGIQSDVVSYNILIDGCILVDDSAGALSFFNEMRARGIAPTKISYTTLMKAFA 499

Query: 971  RAGQPKNATKVFDELLRDPQIKVDLPAWNMLLESYCMAGMVETAKLVMQQMREKKIDPNA 792
             +GQPK A KVF+E+  DP++KVDL AWNML+E YC  G+VE AK V+Q+M++  + P+A
Sbjct: 500  YSGQPKLAHKVFNEMDNDPRVKVDLIAWNMLVEGYCKLGLVEEAKKVVQKMKDSGLHPDA 559

Query: 791  SSYGSFVKGLNIARRPVETLDLWESIKDRIDLKLQ----NTNVQPLKPDKGLLDSFLEIF 624
            S+YGS   G+ +AR+P E L LW  +K+R +++ +    +++V PLKPD GLLD+  +I 
Sbjct: 560  STYGSLANGIALARKPGEALLLWNEVKERFEMRKKGEKSDSSVPPLKPDGGLLDTLADIC 619

Query: 623  VRSAYFSKALEVLAFMEGYKFPVNKEKYRKMFRKYHSGIYTSKHKSLVRQNARLDKKRAA 444
            VR+A+F K LE++A ME      NK K+ +++ + HS ++TSKH S  RQ+ R ++KRAA
Sbjct: 620  VRAAFFRKTLEIVACMEENGIAPNKTKFTRIYVEMHSRMFTSKHASRARQDRRTERKRAA 679

Query: 443  EAFKLWVGLPNVYHE 399
            EAFK W+GLPN Y++
Sbjct: 680  EAFKFWLGLPNSYYD 694



 Score = 74.7 bits (182), Expect = 8e-11
 Identities = 46/167 (27%), Positives = 82/167 (49%), Gaps = 3/167 (1%)
 Frame = -3

Query: 1235 QGLNANHLTYNTLLNGYCVLQKMKKAKQLIEEMR---DAGIVPDIVTYNTLINGCIEAMD 1065
            +G   N  TY TL+ GY    ++    +++E MR   D G  PD V+Y T+++  ++   
Sbjct: 338  KGYAPNTRTYTTLMKGYMNAGRVNDTVRMLEAMRHQDDKGSHPDHVSYTTVVSALVKVGS 397

Query: 1064 NVSALEYFDEMKKAAVRPSEITYTILMKAFARAGQPKNATKVFDELLRDPQIKVDLPAWN 885
               A E   EM +  V  + ITY IL+K + +  Q   A ++  E++ D  I+ D+ ++N
Sbjct: 398  MDRAREVLAEMTRIGVPANLITYNILLKGYCKQLQINKAKELLKEMVDDAGIQSDVVSYN 457

Query: 884  MLLESYCMAGMVETAKLVMQQMREKKIDPNASSYGSFVKGLNIARRP 744
            +L++   +      A     +MR + I P   SY + +K    + +P
Sbjct: 458  ILIDGCILVDDSAGALSFFNEMRARGIAPTKISYTTLMKAFAYSGQP 504


>dbj|BAJ98927.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 733

 Score =  315 bits (806), Expect = 4e-83
 Identities = 153/311 (49%), Positives = 215/311 (69%), Gaps = 1/311 (0%)
 Frame = -3

Query: 1331 RPDHMTYTTAISAFVRMDMINEAHALLQEMAMQGLNANHLTYNTLLNGYCVLQKMKKAKQ 1152
            RPDH+TYTT +S       +  AHA+L EMA  G+ A+ +TYN L+ GYC   +M +A++
Sbjct: 403  RPDHVTYTTVVSTLAAAGDMERAHAVLDEMARAGVPASRVTYNVLIKGYCQQLQMSRARE 462

Query: 1151 LIEEMR-DAGIVPDIVTYNTLINGCIEAMDNVSALEYFDEMKKAAVRPSEITYTILMKAF 975
            L+EEM  DAGI  D+VTYNTLI+GC+   D+  AL  F+EM+   V PS ++YT LMKAF
Sbjct: 463  LLEEMTTDAGIEADVVTYNTLIDGCVLMDDSAGALALFNEMRARGVAPSTVSYTTLMKAF 522

Query: 974  ARAGQPKNATKVFDELLRDPQIKVDLPAWNMLLESYCMAGMVETAKLVMQQMREKKIDPN 795
            A +GQPK A  VF+E+ +DP++ VD PAWNML+E YC  GM+ETAK  +++M+E  + P+
Sbjct: 523  AASGQPKVAHNVFEEMEKDPRVTVDRPAWNMLVEGYCQQGMLETAKQTVERMKESGVQPD 582

Query: 794  ASSYGSFVKGLNIARRPVETLDLWESIKDRIDLKLQNTNVQPLKPDKGLLDSFLEIFVRS 615
             ++YGS  KG+ +AR+P E L LW  +K+R +    N     L+PD+ LLD+  ++ VR 
Sbjct: 583  VATYGSLAKGIAVARKPGEALLLWNEVKERCEAGSGN-GKPGLRPDEELLDALADVCVRG 641

Query: 614  AYFSKALEVLAFMEGYKFPVNKEKYRKMFRKYHSGIYTSKHKSLVRQNARLDKKRAAEAF 435
            A+F KALE++A ME      NK KY+K++ + HS ++TSKH S  RQ+ R ++KRAAEAF
Sbjct: 642  AFFKKALEIVACMEENGIAPNKTKYKKIYIEMHSRMFTSKHASQARQDRRRERKRAAEAF 701

Query: 434  KLWVGLPNVYH 402
            K W+GLPN Y+
Sbjct: 702  KFWLGLPNSYY 712



 Score = 60.5 bits (145), Expect = 2e-06
 Identities = 45/183 (24%), Positives = 84/183 (45%), Gaps = 8/183 (4%)
 Frame = -3

Query: 1325 DHMTYTTAISAFVRMDMINEAHALLQEMAMQGLNANHLTYNTLLNGYCVLQKMKKAKQLI 1146
            D  + + A SA  R    + A++LL  M  +GL  +   Y   ++       ++    ++
Sbjct: 130  DANSLSLAASAAARSGSAHLAYSLLLSMLRRGLLPDRRAYTAAISRLRPAHALRLFDAVL 189

Query: 1145 EEMRDAG-------IVPDIVTYNTLINGCIEAMDNVSALEYFDEMKK-AAVRPSEITYTI 990
              +R A         +PD   +N +++ C +A D     + FDEM+   +  P  +TY +
Sbjct: 190  HHLRRAPDSASPSFALPDTAAFNAVLSACADAGDCRRFRQLFDEMRSWPSAAPDALTYNV 249

Query: 989  LMKAFARAGQPKNATKVFDELLRDPQIKVDLPAWNMLLESYCMAGMVETAKLVMQQMREK 810
             +K  ARAG+     +V + +L    I      ++ L+ +Y   G + TA+ ++Q MRE 
Sbjct: 250  AIKMCARAGRRDLVARVLERIL-SSGIAPCATTFHSLVAAYVGFGDIPTAERIVQAMREG 308

Query: 809  KID 801
            + D
Sbjct: 309  RSD 311


>ref|XP_004497462.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09650,
            chloroplastic-like isoform X2 [Cicer arietinum]
          Length = 732

 Score =  314 bits (805), Expect = 5e-83
 Identities = 155/317 (48%), Positives = 223/317 (70%), Gaps = 8/317 (2%)
 Frame = -3

Query: 1328 PDHMTYTTAISAFVRMDMINEAHALLQEMAMQGLNANHLTYNTLLNGYCVLQKMKKAKQL 1149
            PDH++YTT +SA V+   ++ A  +L EM   G+ AN +TYN LL GYC   +M KA++L
Sbjct: 399  PDHVSYTTVVSALVKAGFMDRARQVLAEMTRIGVPANRITYNILLKGYCRQLQMDKAREL 458

Query: 1148 IEEM-RDAGIVPDIVTYNTLINGCIEAMDNVSALEYFDEMKKAAVRPSEITYTILMKAFA 972
            +++M  D GI PD+V+YN LI+GCI   D+  AL +F+EM+   + P++I+YT LMKAFA
Sbjct: 459  LKDMTEDIGIQPDVVSYNILIDGCILVDDSAGALSFFNEMRVRGIAPTKISYTTLMKAFA 518

Query: 971  RAGQPKNATKVFDELLRDPQIKVDLPAWNMLLESYCMAGMVETAKLVMQQMREKKIDPNA 792
             +GQPK A +VFDE++ DP+++VDL AWNML+E Y   G+VE AK V+Q+M+E    P+ 
Sbjct: 519  LSGQPKLAQRVFDEMMNDPRVRVDLIAWNMLVEGYSRLGLVEEAKKVIQKMKENGFHPDV 578

Query: 791  SSYGSFVKGLNIARRPVETLDLWESIKDRIDL-----KLQNTNV--QPLKPDKGLLDSFL 633
            S+YGS   G+ +AR+P E L LW  +K+R ++     K  +++V   PLKPD+GLLD+  
Sbjct: 579  STYGSLANGIALARKPGEALILWNEVKERCEVGKEGGKSDSSSVVPPPLKPDEGLLDTLA 638

Query: 632  EIFVRSAYFSKALEVLAFMEGYKFPVNKEKYRKMFRKYHSGIYTSKHKSLVRQNARLDKK 453
            +I VR+A+F KALE+ A ME    P NK KY +++ + HS ++TSKH S  RQ+ R+++K
Sbjct: 639  DICVRAAFFRKALEIAACMEENGIPPNKTKYTRIYVEMHSRMFTSKHASKARQDRRVERK 698

Query: 452  RAAEAFKLWVGLPNVYH 402
            RAAEAFK W+GLPN Y+
Sbjct: 699  RAAEAFKFWLGLPNSYY 715



 Score = 71.6 bits (174), Expect = 7e-10
 Identities = 50/207 (24%), Positives = 98/207 (47%), Gaps = 7/207 (3%)
 Frame = -3

Query: 1271 NEAHALLQEMAMQGLNANHLTYNTLLNGYCVLQKMKKAKQLIEEMR---DAGIVPDIVTY 1101
            N+A+     +  +    N   Y TL+ GY    ++    +++E MR   D+   PD V+Y
Sbjct: 345  NDANGNDPPLLPKAYTPNTRIYTTLMKGYMKAGRVSDTVRMLEAMRCQDDSASHPDHVSY 404

Query: 1100 NTLINGCIEAMDNVSALEYFDEMKKAAVRPSEITYTILMKAFARAGQPKNATKVFDELLR 921
             T+++  ++A     A +   EM +  V  + ITY IL+K + R  Q   A ++  ++  
Sbjct: 405  TTVVSALVKAGFMDRARQVLAEMTRIGVPANRITYNILLKGYCRQLQMDKARELLKDMTE 464

Query: 920  DPQIKVDLPAWNMLLESYCMAGMVETAKLVMQQMREKKIDPNASSYGSFVKGLNIARRPV 741
            D  I+ D+ ++N+L++   +      A     +MR + I P   SY + +K   ++ +P 
Sbjct: 465  DIGIQPDVVSYNILIDGCILVDDSAGALSFFNEMRVRGIAPTKISYTTLMKAFALSGQPK 524

Query: 740  ETLDLWESIKD----RIDLKLQNTNVQ 672
                +++ + +    R+DL   N  V+
Sbjct: 525  LAQRVFDEMMNDPRVRVDLIAWNMLVE 551


>ref|XP_004497461.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09650,
            chloroplastic-like isoform X1 [Cicer arietinum]
          Length = 732

 Score =  314 bits (805), Expect = 5e-83
 Identities = 155/317 (48%), Positives = 223/317 (70%), Gaps = 8/317 (2%)
 Frame = -3

Query: 1328 PDHMTYTTAISAFVRMDMINEAHALLQEMAMQGLNANHLTYNTLLNGYCVLQKMKKAKQL 1149
            PDH++YTT +SA V+   ++ A  +L EM   G+ AN +TYN LL GYC   +M KA++L
Sbjct: 399  PDHVSYTTVVSALVKAGFMDRARQVLAEMTRIGVPANRITYNILLKGYCRQLQMDKAREL 458

Query: 1148 IEEM-RDAGIVPDIVTYNTLINGCIEAMDNVSALEYFDEMKKAAVRPSEITYTILMKAFA 972
            +++M  D GI PD+V+YN LI+GCI   D+  AL +F+EM+   + P++I+YT LMKAFA
Sbjct: 459  LKDMTEDIGIQPDVVSYNILIDGCILVDDSAGALSFFNEMRVRGIAPTKISYTTLMKAFA 518

Query: 971  RAGQPKNATKVFDELLRDPQIKVDLPAWNMLLESYCMAGMVETAKLVMQQMREKKIDPNA 792
             +GQPK A +VFDE++ DP+++VDL AWNML+E Y   G+VE AK V+Q+M+E    P+ 
Sbjct: 519  LSGQPKLAQRVFDEMMNDPRVRVDLIAWNMLVEGYSRLGLVEEAKKVIQKMKENGFHPDV 578

Query: 791  SSYGSFVKGLNIARRPVETLDLWESIKDRIDL-----KLQNTNV--QPLKPDKGLLDSFL 633
            S+YGS   G+ +AR+P E L LW  +K+R ++     K  +++V   PLKPD+GLLD+  
Sbjct: 579  STYGSLANGIALARKPGEALILWNEVKERCEVGKEGGKSDSSSVVPPPLKPDEGLLDTLA 638

Query: 632  EIFVRSAYFSKALEVLAFMEGYKFPVNKEKYRKMFRKYHSGIYTSKHKSLVRQNARLDKK 453
            +I VR+A+F KALE+ A ME    P NK KY +++ + HS ++TSKH S  RQ+ R+++K
Sbjct: 639  DICVRAAFFRKALEIAACMEENGIPPNKTKYTRIYVEMHSRMFTSKHASKARQDRRVERK 698

Query: 452  RAAEAFKLWVGLPNVYH 402
            RAAEAFK W+GLPN Y+
Sbjct: 699  RAAEAFKFWLGLPNSYY 715



 Score = 71.6 bits (174), Expect = 7e-10
 Identities = 50/207 (24%), Positives = 98/207 (47%), Gaps = 7/207 (3%)
 Frame = -3

Query: 1271 NEAHALLQEMAMQGLNANHLTYNTLLNGYCVLQKMKKAKQLIEEMR---DAGIVPDIVTY 1101
            N+A+     +  +    N   Y TL+ GY    ++    +++E MR   D+   PD V+Y
Sbjct: 345  NDANGNDPPLLPKAYTPNTRIYTTLMKGYMKAGRVSDTVRMLEAMRCQDDSASHPDHVSY 404

Query: 1100 NTLINGCIEAMDNVSALEYFDEMKKAAVRPSEITYTILMKAFARAGQPKNATKVFDELLR 921
             T+++  ++A     A +   EM +  V  + ITY IL+K + R  Q   A ++  ++  
Sbjct: 405  TTVVSALVKAGFMDRARQVLAEMTRIGVPANRITYNILLKGYCRQLQMDKARELLKDMTE 464

Query: 920  DPQIKVDLPAWNMLLESYCMAGMVETAKLVMQQMREKKIDPNASSYGSFVKGLNIARRPV 741
            D  I+ D+ ++N+L++   +      A     +MR + I P   SY + +K   ++ +P 
Sbjct: 465  DIGIQPDVVSYNILIDGCILVDDSAGALSFFNEMRVRGIAPTKISYTTLMKAFALSGQPK 524

Query: 740  ETLDLWESIKD----RIDLKLQNTNVQ 672
                +++ + +    R+DL   N  V+
Sbjct: 525  LAQRVFDEMMNDPRVRVDLIAWNMLVE 551


>ref|XP_003536980.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09650,
            chloroplastic-like [Glycine max]
          Length = 716

 Score =  314 bits (804), Expect = 6e-83
 Identities = 153/316 (48%), Positives = 225/316 (71%), Gaps = 5/316 (1%)
 Frame = -3

Query: 1331 RPDHMTYTTAISAFVRMDMINEAHALLQEMAMQGLNANHLTYNTLLNGYCVLQKMKKAKQ 1152
            +PDH++YTT +SA V++  ++ A  +L EM   G+ AN +TYN LL GYC   ++ KA++
Sbjct: 382  QPDHVSYTTVVSALVKVGAMDRARQVLAEMTRIGVPANLITYNVLLKGYCKQLQIDKARE 441

Query: 1151 LIEEM-RDAGIVPDIVTYNTLINGCIEAMDNVSALEYFDEMKKAAVRPSEITYTILMKAF 975
            L++EM  DAGI PD+V+YN LI+GCI   D+  AL +F+EM+   + P++I+YT LMKAF
Sbjct: 442  LLKEMVDDAGIQPDVVSYNILIDGCILVDDSAGALSFFNEMRARGIAPTKISYTTLMKAF 501

Query: 974  ARAGQPKNATKVFDELLRDPQIKVDLPAWNMLLESYCMAGMVETAKLVMQQMREKKIDPN 795
            A +GQPK A +VF+E+  DP++KVDL AWNML+E YC  G+VE AK V+Q+M+E    P+
Sbjct: 502  AYSGQPKLAHRVFNEMDSDPRVKVDLIAWNMLVEGYCRLGLVEEAKKVVQKMKESGFHPD 561

Query: 794  ASSYGSFVKGLNIARRPVETLDLWESIKDRIDLKLQ----NTNVQPLKPDKGLLDSFLEI 627
              +YGS   G+ +AR+P E L LW  +K+R ++  +    +++V PLKPD  LLD+  +I
Sbjct: 562  VGTYGSLANGIALARKPGEALLLWNEVKERCEVGKEGGKSDSSVPPLKPDGALLDTIADI 621

Query: 626  FVRSAYFSKALEVLAFMEGYKFPVNKEKYRKMFRKYHSGIYTSKHKSLVRQNARLDKKRA 447
             VR+A+F KALE++A ME    P NK K+ +++ + HS ++TSKH S  RQ+ R+++KRA
Sbjct: 622  CVRAAFFRKALEIVACMEENGIPPNKTKFTRIYVEMHSRMFTSKHASRARQDRRVERKRA 681

Query: 446  AEAFKLWVGLPNVYHE 399
            AEAFK W+GLPN Y++
Sbjct: 682  AEAFKFWLGLPNSYYD 697



 Score = 72.4 bits (176), Expect = 4e-10
 Identities = 44/167 (26%), Positives = 82/167 (49%), Gaps = 3/167 (1%)
 Frame = -3

Query: 1235 QGLNANHLTYNTLLNGYCVLQKMKKAKQLIEEMR---DAGIVPDIVTYNTLINGCIEAMD 1065
            +G   N  TY TL+ GY    ++    +++E MR   D G  PD V+Y T+++  ++   
Sbjct: 341  KGYAPNTRTYTTLMKGYMNAGRVSDTVRMLEAMRRLDDKGSQPDHVSYTTVVSALVKVGA 400

Query: 1064 NVSALEYFDEMKKAAVRPSEITYTILMKAFARAGQPKNATKVFDELLRDPQIKVDLPAWN 885
               A +   EM +  V  + ITY +L+K + +  Q   A ++  E++ D  I+ D+ ++N
Sbjct: 401  MDRARQVLAEMTRIGVPANLITYNVLLKGYCKQLQIDKARELLKEMVDDAGIQPDVVSYN 460

Query: 884  MLLESYCMAGMVETAKLVMQQMREKKIDPNASSYGSFVKGLNIARRP 744
            +L++   +      A     +MR + I P   SY + +K    + +P
Sbjct: 461  ILIDGCILVDDSAGALSFFNEMRARGIAPTKISYTTLMKAFAYSGQP 507


>ref|NP_187576.1| RNA binding protein HCF152 [Arabidopsis thaliana]
            gi|75204290|sp|Q9SF38.1|PP222_ARATH RecName:
            Full=Pentatricopeptide repeat-containing protein
            At3g09650, chloroplastic; AltName: Full=Protein HIGH
            CHLOROPHYLL FLUORESCENCE 152; Flags: Precursor
            gi|6682243|gb|AAF23295.1|AC016661_20 hypothetical protein
            [Arabidopsis thaliana] gi|332641272|gb|AEE74793.1| RNA
            binding protein HCF152 [Arabidopsis thaliana]
          Length = 778

 Score =  313 bits (803), Expect = 8e-83
 Identities = 154/318 (48%), Positives = 224/318 (70%), Gaps = 9/318 (2%)
 Frame = -3

Query: 1328 PDHMTYTTAISAFVRMDMINEAHALLQEMAMQGLNANHLTYNTLLNGYCVLQKMKKAKQL 1149
            PD +TYTT +SAFV   +++ A  +L EMA  G+ AN +TYN LL GYC   ++ +A+ L
Sbjct: 450  PDEVTYTTVVSAFVNAGLMDRARQVLAEMARMGVPANRITYNVLLKGYCKQLQIDRAEDL 509

Query: 1148 IEEM-RDAGIVPDIVTYNTLINGCIEAMDNVSALEYFDEMKKAAVRPSEITYTILMKAFA 972
            + EM  DAGI PD+V+YN +I+GCI   D+  AL +F+EM+   + P++I+YT LMKAFA
Sbjct: 510  LREMTEDAGIEPDVVSYNIIIDGCILIDDSAGALAFFNEMRTRGIAPTKISYTTLMKAFA 569

Query: 971  RAGQPKNATKVFDELLRDPQIKVDLPAWNMLLESYCMAGMVETAKLVMQQMREKKIDPNA 792
             +GQPK A +VFDE++ DP++KVDL AWNML+E YC  G++E A+ V+ +M+E    PN 
Sbjct: 570  MSGQPKLANRVFDEMMNDPRVKVDLIAWNMLVEGYCRLGLIEDAQRVVSRMKENGFYPNV 629

Query: 791  SSYGSFVKGLNIARRPVETLDLWESIKDRIDLKLQ----NTNVQP----LKPDKGLLDSF 636
            ++YGS   G++ AR+P + L LW+ IK+R  +K +    +++  P    LKPD+GLLD+ 
Sbjct: 630  ATYGSLANGVSQARKPGDALLLWKEIKERCAVKKKEAPSDSSSDPAPPMLKPDEGLLDTL 689

Query: 635  LEIFVRSAYFSKALEVLAFMEGYKFPVNKEKYRKMFRKYHSGIYTSKHKSLVRQNARLDK 456
             +I VR+A+F KALE++A ME    P NK KY+K++ + HS ++TSKH S  R + R+++
Sbjct: 690  ADICVRAAFFKKALEIIACMEENGIPPNKTKYKKIYVEMHSRMFTSKHASQARIDRRVER 749

Query: 455  KRAAEAFKLWVGLPNVYH 402
            KRAAEAFK W+GLPN Y+
Sbjct: 750  KRAAEAFKFWLGLPNSYY 767



 Score = 60.1 bits (144), Expect = 2e-06
 Identities = 32/106 (30%), Positives = 56/106 (52%)
 Frame = -3

Query: 1118 PDIVTYNTLINGCIEAMDNVSALEYFDEMKKAAVRPSEITYTILMKAFARAGQPKNATKV 939
            PD   +N ++N C    D     + F+EM +    P  +TY +++K  AR G+ +    V
Sbjct: 234  PDTAAFNAVLNACANLGDTDKYWKLFEEMSEWDCEPDVLTYNVMIKLCARVGRKELIVFV 293

Query: 938  FDELLRDPQIKVDLPAWNMLLESYCMAGMVETAKLVMQQMREKKID 801
             + ++ D  IKV +   + L+ +Y   G + TA+ ++Q MREK+ D
Sbjct: 294  LERII-DKGIKVCMTTMHSLVAAYVGFGDLRTAERIVQAMREKRRD 338


>dbj|BAD95223.1| hypothetical protein [Arabidopsis thaliana]
          Length = 778

 Score =  313 bits (803), Expect = 8e-83
 Identities = 154/318 (48%), Positives = 224/318 (70%), Gaps = 9/318 (2%)
 Frame = -3

Query: 1328 PDHMTYTTAISAFVRMDMINEAHALLQEMAMQGLNANHLTYNTLLNGYCVLQKMKKAKQL 1149
            PD +TYTT +SAFV   +++ A  +L EMA  G+ AN +TYN LL GYC   ++ +A+ L
Sbjct: 450  PDEVTYTTVVSAFVNAGLMDRARQVLAEMARMGVPANRITYNVLLKGYCKQLQIDRAEDL 509

Query: 1148 IEEM-RDAGIVPDIVTYNTLINGCIEAMDNVSALEYFDEMKKAAVRPSEITYTILMKAFA 972
            + EM  DAGI PD+V+YN +I+GCI   D+  AL +F+EM+   + P++I+YT LMKAFA
Sbjct: 510  LREMTEDAGIEPDVVSYNIIIDGCILIDDSAGALAFFNEMRTRGIAPTKISYTTLMKAFA 569

Query: 971  RAGQPKNATKVFDELLRDPQIKVDLPAWNMLLESYCMAGMVETAKLVMQQMREKKIDPNA 792
             +GQPK A +VFDE++ DP++KVDL AWNML+E YC  G++E A+ V+ +M+E    PN 
Sbjct: 570  MSGQPKLANRVFDEMMNDPRVKVDLIAWNMLVEGYCRLGLIEDAQRVVSRMKENGFYPNV 629

Query: 791  SSYGSFVKGLNIARRPVETLDLWESIKDRIDLKLQ----NTNVQP----LKPDKGLLDSF 636
            ++YGS   G++ AR+P + L LW+ IK+R  +K +    +++  P    LKPD+GLLD+ 
Sbjct: 630  ATYGSLANGVSQARKPGDALLLWKEIKERCAVKKKEAPSDSSSDPAPPMLKPDEGLLDTL 689

Query: 635  LEIFVRSAYFSKALEVLAFMEGYKFPVNKEKYRKMFRKYHSGIYTSKHKSLVRQNARLDK 456
             +I VR+A+F KALE++A ME    P NK KY+K++ + HS ++TSKH S  R + R+++
Sbjct: 690  ADICVRAAFFKKALEIIACMEENGIPPNKTKYKKIYVEMHSRMFTSKHASQARIDRRVER 749

Query: 455  KRAAEAFKLWVGLPNVYH 402
            KRAAEAFK W+GLPN Y+
Sbjct: 750  KRAAEAFKFWLGLPNSYY 767



 Score = 60.1 bits (144), Expect = 2e-06
 Identities = 32/106 (30%), Positives = 56/106 (52%)
 Frame = -3

Query: 1118 PDIVTYNTLINGCIEAMDNVSALEYFDEMKKAAVRPSEITYTILMKAFARAGQPKNATKV 939
            PD   +N ++N C    D     + F+EM +    P  +TY +++K  AR G+ +    V
Sbjct: 234  PDTAAFNAVLNACANLGDTDKYWKLFEEMSEWDCEPDVLTYNVMIKLCARVGRKELIVFV 293

Query: 938  FDELLRDPQIKVDLPAWNMLLESYCMAGMVETAKLVMQQMREKKID 801
             + ++ D  IKV +   + L+ +Y   G + TA+ ++Q MREK+ D
Sbjct: 294  LERII-DKGIKVCMTTMHSLVAAYVGFGDLRTAERIVQAMREKRRD 338