BLASTX nr result
ID: Ephedra25_contig00025710
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra25_contig00025710
(484 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_001761765.1| predicted protein [Physcomitrella patens] gi... 84 3e-14
ref|XP_005420007.1| PREDICTED: RNA-binding protein 41 [Geospiza ... 62 8e-08
ref|XP_001626806.1| predicted protein [Nematostella vectensis] g... 62 8e-08
ref|XP_001378466.2| PREDICTED: RNA-binding protein 41-like [Mono... 61 2e-07
ref|XP_005527475.1| PREDICTED: RNA-binding protein 41 [Pseudopod... 60 2e-07
ref|XP_005076753.1| PREDICTED: RNA-binding protein 41 [Mesocrice... 60 2e-07
ref|XP_006528584.1| PREDICTED: RNA-binding protein 41 isoform X4... 60 3e-07
ref|XP_006528582.1| PREDICTED: RNA-binding protein 41 isoform X2... 60 3e-07
ref|XP_006528581.1| PREDICTED: RNA-binding protein 41 isoform X1... 60 3e-07
ref|XP_006137520.1| PREDICTED: RNA-binding protein 41 [Pelodiscu... 60 3e-07
ref|XP_005367415.1| PREDICTED: RNA-binding protein 41 [Microtus ... 60 3e-07
ref|XP_005046068.1| PREDICTED: RNA-binding protein 41-like [Fice... 60 3e-07
dbj|BAE37811.1| unnamed protein product [Mus musculus] 60 3e-07
ref|NP_001165619.1| RNA-binding protein 41 isoform 3 [Mus muscul... 60 3e-07
ref|XP_006528583.1| PREDICTED: RNA-binding protein 41 isoform X3... 60 3e-07
ref|NP_001165618.1| RNA-binding protein 41 isoform 1 [Mus musculus] 60 3e-07
ref|NP_001102890.1| RNA binding motif protein 41 [Rattus norvegi... 60 3e-07
ref|NP_705814.1| RNA-binding protein 41 isoform 2 [Mus musculus]... 60 3e-07
ref|XP_005151386.1| PREDICTED: RNA-binding protein 41 [Melopsitt... 60 4e-07
ref|XP_004590227.1| PREDICTED: RNA-binding protein 41 [Ochotona ... 60 4e-07
>ref|XP_001761765.1| predicted protein [Physcomitrella patens]
gi|162687136|gb|EDQ73521.1| predicted protein
[Physcomitrella patens]
Length = 427
Score = 83.6 bits (205), Expect = 3e-14
Identities = 49/137 (35%), Positives = 81/137 (59%), Gaps = 12/137 (8%)
Frame = +3
Query: 108 TEDSCTRTASEVFSCPAPDVLCLHEYLDIRNREGK------------SCQVETNVISQSE 251
+E+ R+ ++VF+ PAP VL ++ YL+ R R+G S + ++ + Q +
Sbjct: 208 SEEDGPRSVNDVFANPAPPVLDMYTYLEQR-RQGSFLLNVGPSLLEGSEPLASDCLPQHD 266
Query: 252 IEGKDELNGSECSVVEGTISEKEILSNKLSEKEIRTTQGGKFANYTPGDPTRVLFIKNLS 431
EG+ +G+ + V + E+ I +N++ E EIR GGKFANYT G PT ++IKNL+
Sbjct: 267 SEGETGRSGATATTVT-EVPEEVIKANRMPEGEIRGLPGGKFANYTSGSPTNTVYIKNLA 325
Query: 432 SSVQESDLVALYLRFES 482
+ V E DL+ ++ RFE+
Sbjct: 326 ADVTEPDLIGIFGRFET 342
>ref|XP_005420007.1| PREDICTED: RNA-binding protein 41 [Geospiza fortis]
Length = 435
Score = 62.0 bits (149), Expect = 8e-08
Identities = 42/134 (31%), Positives = 72/134 (53%)
Frame = +3
Query: 78 SFAQEGVTGRTEDSCTRTASEVFSCPAPDVLCLHEYLDIRNREGKSCQVETNVISQSEIE 257
S QE ++ + + AS+ S P P E + ++E ++ Q + +S +E +
Sbjct: 228 SVYQELLSKKCPEKVQSAASDPCSSPTPQGSRTEETSSLPDQEEQAEQAASPSVSATEPQ 287
Query: 258 GKDELNGSECSVVEGTISEKEILSNKLSEKEIRTTQGGKFANYTPGDPTRVLFIKNLSSS 437
VE + E++IL N+LSE+E+R +F++Y PG+P+RVL++KNL
Sbjct: 288 QSPPRTVVIKEPVE-FVPEQKILRNRLSEEELRKIP--RFSSYHPGEPSRVLYLKNLGPR 344
Query: 438 VQESDLVALYLRFE 479
V DLV+L+ RF+
Sbjct: 345 VTVRDLVSLFARFQ 358
>ref|XP_001626806.1| predicted protein [Nematostella vectensis]
gi|156213695|gb|EDO34706.1| predicted protein
[Nematostella vectensis]
Length = 464
Score = 62.0 bits (149), Expect = 8e-08
Identities = 30/59 (50%), Positives = 44/59 (74%)
Frame = +3
Query: 303 TISEKEILSNKLSEKEIRTTQGGKFANYTPGDPTRVLFIKNLSSSVQESDLVALYLRFE 479
+I E EIL N+LS EI+ Q +F +Y PG+P++ LF+KNLS+ V+E DL+ L+LRF+
Sbjct: 259 SIEESEILHNRLSIDEIK--QIPRFKDYAPGEPSKTLFLKNLSNKVKEEDLIRLFLRFQ 315
>ref|XP_001378466.2| PREDICTED: RNA-binding protein 41-like [Monodelphis domestica]
Length = 550
Score = 60.8 bits (146), Expect = 2e-07
Identities = 44/125 (35%), Positives = 71/125 (56%), Gaps = 11/125 (8%)
Frame = +3
Query: 138 EVFSCPAPDVLCL------HEYLDIRNREG-KSCQVE---TNVISQSEIEGKDELNG-SE 284
E F+CP+ D L + L + +G ++ Q E +V+ E E + LN +
Sbjct: 348 EPFACPSLDSDVLVDSSGPSKNLSVLEDQGNQAAQAEGSSLHVVKAIESEPQQCLNEPKK 407
Query: 285 CSVVEGTISEKEILSNKLSEKEIRTTQGGKFANYTPGDPTRVLFIKNLSSSVQESDLVAL 464
+ V +SE +I N+LSE++IR FA+Y+PG+P +VL++KNLS V E +LV+L
Sbjct: 408 LTEVVDFVSEDDIERNRLSEEDIRKIP--MFASYSPGEPNKVLYLKNLSPRVTEKELVSL 465
Query: 465 YLRFE 479
+ RF+
Sbjct: 466 FARFQ 470
>ref|XP_005527475.1| PREDICTED: RNA-binding protein 41 [Pseudopodoces humilis]
Length = 418
Score = 60.5 bits (145), Expect = 2e-07
Identities = 28/58 (48%), Positives = 44/58 (75%)
Frame = +3
Query: 306 ISEKEILSNKLSEKEIRTTQGGKFANYTPGDPTRVLFIKNLSSSVQESDLVALYLRFE 479
+ E+EIL N+LSE+E+R +F++Y PG+P++VL++KNL+ V DLVAL+ RF+
Sbjct: 286 VPEEEILKNRLSEEELRNIP--RFSSYHPGEPSKVLYLKNLAPRVTVKDLVALFARFQ 341
>ref|XP_005076753.1| PREDICTED: RNA-binding protein 41 [Mesocricetus auratus]
Length = 413
Score = 60.5 bits (145), Expect = 2e-07
Identities = 29/58 (50%), Positives = 42/58 (72%)
Frame = +3
Query: 306 ISEKEILSNKLSEKEIRTTQGGKFANYTPGDPTRVLFIKNLSSSVQESDLVALYLRFE 479
I E EI N+LSE+EIR F++Y PG+P +VL++KNLS V+E DL++L+ RF+
Sbjct: 278 IPEDEIQRNRLSEEEIRNIP--MFSSYNPGEPNKVLYLKNLSPRVKEKDLISLFARFQ 333
>ref|XP_006528584.1| PREDICTED: RNA-binding protein 41 isoform X4 [Mus musculus]
Length = 433
Score = 60.1 bits (144), Expect = 3e-07
Identities = 29/58 (50%), Positives = 42/58 (72%)
Frame = +3
Query: 306 ISEKEILSNKLSEKEIRTTQGGKFANYTPGDPTRVLFIKNLSSSVQESDLVALYLRFE 479
I E EI N+LSE+EIR F++Y PG+P +VL++KNLS V+E DL++L+ RF+
Sbjct: 298 IPEDEIQRNRLSEEEIRNIP--MFSSYNPGEPNKVLYLKNLSPRVKERDLISLFARFQ 353
>ref|XP_006528582.1| PREDICTED: RNA-binding protein 41 isoform X2 [Mus musculus]
Length = 444
Score = 60.1 bits (144), Expect = 3e-07
Identities = 29/58 (50%), Positives = 42/58 (72%)
Frame = +3
Query: 306 ISEKEILSNKLSEKEIRTTQGGKFANYTPGDPTRVLFIKNLSSSVQESDLVALYLRFE 479
I E EI N+LSE+EIR F++Y PG+P +VL++KNLS V+E DL++L+ RF+
Sbjct: 309 IPEDEIQRNRLSEEEIRNIP--MFSSYNPGEPNKVLYLKNLSPRVKERDLISLFARFQ 364
>ref|XP_006528581.1| PREDICTED: RNA-binding protein 41 isoform X1 [Mus musculus]
Length = 457
Score = 60.1 bits (144), Expect = 3e-07
Identities = 29/58 (50%), Positives = 42/58 (72%)
Frame = +3
Query: 306 ISEKEILSNKLSEKEIRTTQGGKFANYTPGDPTRVLFIKNLSSSVQESDLVALYLRFE 479
I E EI N+LSE+EIR F++Y PG+P +VL++KNLS V+E DL++L+ RF+
Sbjct: 322 IPEDEIQRNRLSEEEIRNIP--MFSSYNPGEPNKVLYLKNLSPRVKERDLISLFARFQ 377
>ref|XP_006137520.1| PREDICTED: RNA-binding protein 41 [Pelodiscus sinensis]
Length = 410
Score = 60.1 bits (144), Expect = 3e-07
Identities = 28/58 (48%), Positives = 45/58 (77%)
Frame = +3
Query: 306 ISEKEILSNKLSEKEIRTTQGGKFANYTPGDPTRVLFIKNLSSSVQESDLVALYLRFE 479
I E+EI N+LSE+EIR+ +F++Y PG+P++VL++KNLS+ V DL++L+ RF+
Sbjct: 275 IPEEEIRKNRLSEEEIRSIS--RFSSYKPGEPSKVLYLKNLSARVTVKDLLSLFARFQ 330
>ref|XP_005367415.1| PREDICTED: RNA-binding protein 41 [Microtus ochrogaster]
Length = 413
Score = 60.1 bits (144), Expect = 3e-07
Identities = 29/58 (50%), Positives = 42/58 (72%)
Frame = +3
Query: 306 ISEKEILSNKLSEKEIRTTQGGKFANYTPGDPTRVLFIKNLSSSVQESDLVALYLRFE 479
I E EI N+LSE+EIR F++Y PG+P +VL++KNLS V+E DL++L+ RF+
Sbjct: 278 IPEDEIQRNRLSEEEIRNIP--MFSSYNPGEPNKVLYLKNLSPRVKERDLISLFARFQ 333
>ref|XP_005046068.1| PREDICTED: RNA-binding protein 41-like [Ficedula albicollis]
Length = 416
Score = 60.1 bits (144), Expect = 3e-07
Identities = 28/58 (48%), Positives = 44/58 (75%)
Frame = +3
Query: 306 ISEKEILSNKLSEKEIRTTQGGKFANYTPGDPTRVLFIKNLSSSVQESDLVALYLRFE 479
+ E+EIL N+LSE+E+R +F++Y PG+P+RVL++KNL+ V DLV+L+ RF+
Sbjct: 284 VPEEEILKNRLSEEELRKIP--RFSSYHPGEPSRVLYLKNLAPRVTVKDLVSLFARFQ 339
>dbj|BAE37811.1| unnamed protein product [Mus musculus]
Length = 425
Score = 60.1 bits (144), Expect = 3e-07
Identities = 29/58 (50%), Positives = 42/58 (72%)
Frame = +3
Query: 306 ISEKEILSNKLSEKEIRTTQGGKFANYTPGDPTRVLFIKNLSSSVQESDLVALYLRFE 479
I E EI N+LSE+EIR F++Y PG+P +VL++KNLS V+E DL++L+ RF+
Sbjct: 290 IPEDEIQRNRLSEEEIRNIP--MFSSYNPGEPNKVLYLKNLSPRVKERDLISLFARFQ 345
>ref|NP_001165619.1| RNA-binding protein 41 isoform 3 [Mus musculus]
gi|74139275|dbj|BAE38514.1| unnamed protein product [Mus
musculus]
Length = 404
Score = 60.1 bits (144), Expect = 3e-07
Identities = 29/58 (50%), Positives = 42/58 (72%)
Frame = +3
Query: 306 ISEKEILSNKLSEKEIRTTQGGKFANYTPGDPTRVLFIKNLSSSVQESDLVALYLRFE 479
I E EI N+LSE+EIR F++Y PG+P +VL++KNLS V+E DL++L+ RF+
Sbjct: 278 IPEDEIQRNRLSEEEIRNIP--MFSSYNPGEPNKVLYLKNLSPRVKERDLISLFARFQ 333
>ref|XP_006528583.1| PREDICTED: RNA-binding protein 41 isoform X3 [Mus musculus]
Length = 437
Score = 60.1 bits (144), Expect = 3e-07
Identities = 29/58 (50%), Positives = 42/58 (72%)
Frame = +3
Query: 306 ISEKEILSNKLSEKEIRTTQGGKFANYTPGDPTRVLFIKNLSSSVQESDLVALYLRFE 479
I E EI N+LSE+EIR F++Y PG+P +VL++KNLS V+E DL++L+ RF+
Sbjct: 302 IPEDEIQRNRLSEEEIRNIP--MFSSYNPGEPNKVLYLKNLSPRVKERDLISLFARFQ 357
>ref|NP_001165618.1| RNA-binding protein 41 isoform 1 [Mus musculus]
Length = 425
Score = 60.1 bits (144), Expect = 3e-07
Identities = 29/58 (50%), Positives = 42/58 (72%)
Frame = +3
Query: 306 ISEKEILSNKLSEKEIRTTQGGKFANYTPGDPTRVLFIKNLSSSVQESDLVALYLRFE 479
I E EI N+LSE+EIR F++Y PG+P +VL++KNLS V+E DL++L+ RF+
Sbjct: 290 IPEDEIQRNRLSEEEIRNIP--MFSSYNPGEPNKVLYLKNLSPRVKERDLISLFARFQ 345
>ref|NP_001102890.1| RNA binding motif protein 41 [Rattus norvegicus]
gi|149022081|gb|EDL78975.1| rCG26849, isoform CRA_a
[Rattus norvegicus]
Length = 413
Score = 60.1 bits (144), Expect = 3e-07
Identities = 29/58 (50%), Positives = 42/58 (72%)
Frame = +3
Query: 306 ISEKEILSNKLSEKEIRTTQGGKFANYTPGDPTRVLFIKNLSSSVQESDLVALYLRFE 479
I E EI N+LSE+EIR F++Y PG+P +VL++KNLS V+E DL++L+ RF+
Sbjct: 278 IPEDEIQRNRLSEEEIRNIP--MFSSYNPGEPNKVLYLKNLSPRVKERDLISLFARFQ 333
>ref|NP_705814.1| RNA-binding protein 41 isoform 2 [Mus musculus]
gi|81914521|sp|Q8JZV4.1|RBM41_MOUSE RecName:
Full=RNA-binding protein 41; AltName: Full=RNA-binding
motif protein 41 gi|22477722|gb|AAH37024.1| RNA binding
motif protein 41 [Mus musculus]
gi|26351139|dbj|BAC39206.1| unnamed protein product [Mus
musculus] gi|26351197|dbj|BAC39235.1| unnamed protein
product [Mus musculus] gi|148691973|gb|EDL23920.1| RNA
binding motif protein 41, isoform CRA_a [Mus musculus]
Length = 413
Score = 60.1 bits (144), Expect = 3e-07
Identities = 29/58 (50%), Positives = 42/58 (72%)
Frame = +3
Query: 306 ISEKEILSNKLSEKEIRTTQGGKFANYTPGDPTRVLFIKNLSSSVQESDLVALYLRFE 479
I E EI N+LSE+EIR F++Y PG+P +VL++KNLS V+E DL++L+ RF+
Sbjct: 278 IPEDEIQRNRLSEEEIRNIP--MFSSYNPGEPNKVLYLKNLSPRVKERDLISLFARFQ 333
>ref|XP_005151386.1| PREDICTED: RNA-binding protein 41 [Melopsittacus undulatus]
Length = 418
Score = 59.7 bits (143), Expect = 4e-07
Identities = 27/58 (46%), Positives = 43/58 (74%)
Frame = +3
Query: 306 ISEKEILSNKLSEKEIRTTQGGKFANYTPGDPTRVLFIKNLSSSVQESDLVALYLRFE 479
+ E+EI N+LSE+E+R+ +F++Y PGDP++VL++KNL V DLV+L+ RF+
Sbjct: 286 VPEEEICKNRLSEEELRSIP--RFSSYNPGDPSKVLYLKNLGPRVTMKDLVSLFARFQ 341
>ref|XP_004590227.1| PREDICTED: RNA-binding protein 41 [Ochotona princeps]
Length = 413
Score = 59.7 bits (143), Expect = 4e-07
Identities = 28/58 (48%), Positives = 42/58 (72%)
Frame = +3
Query: 306 ISEKEILSNKLSEKEIRTTQGGKFANYTPGDPTRVLFIKNLSSSVQESDLVALYLRFE 479
+ E EI N+LSE+EIR F++Y PG+P +VL++KNLS V E+DL++L+ RF+
Sbjct: 278 VPEDEIQRNRLSEEEIRKIP--MFSSYNPGEPNKVLYLKNLSPQVTEADLISLFARFQ 333