BLASTX nr result

ID: Ephedra25_contig00025639 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra25_contig00025639
         (656 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006367172.1| PREDICTED: TMV resistance protein N-like iso...    57   4e-06

>ref|XP_006367172.1| PREDICTED: TMV resistance protein N-like isoform X1 [Solanum
            tuberosum] gi|565403452|ref|XP_006367173.1| PREDICTED:
            TMV resistance protein N-like isoform X2 [Solanum
            tuberosum] gi|565403454|ref|XP_006367174.1| PREDICTED:
            TMV resistance protein N-like isoform X3 [Solanum
            tuberosum] gi|565403456|ref|XP_006367175.1| PREDICTED:
            TMV resistance protein N-like isoform X4 [Solanum
            tuberosum] gi|565403458|ref|XP_006367176.1| PREDICTED:
            TMV resistance protein N-like isoform X5 [Solanum
            tuberosum] gi|565403460|ref|XP_006367177.1| PREDICTED:
            TMV resistance protein N-like isoform X6 [Solanum
            tuberosum]
          Length = 1444

 Score = 57.4 bits (137), Expect = 4e-06
 Identities = 65/214 (30%), Positives = 89/214 (41%), Gaps = 21/214 (9%)
 Frame = +2

Query: 74   WERLKKHPEEFNAIEGLHINIEEDDMEY---------VNRCRKIKILILEREERQRPVRV 226
            W +L+  PEE   +E    N+EE D  Y         + R  K+K L  ++ + +  V  
Sbjct: 786  WSKLESLPEEIGDLE----NLEELDASYTLISRPPSSIVRLNKLKSLCFQKRKSEDRVYF 841

Query: 227  HLPS------SLEILCLK------GHFIHNENLLNIFKVLKLKMNEFEKGFTSYQSFRKV 370
              P       SLE L L       G    +   L+  K LKL  N FE    S      +
Sbjct: 842  VFPLVNEGLVSLESLYLSYCNIIDGGLPEDIGSLSSLKKLKLNRNNFEHLPQSISKLGAL 901

Query: 371  KYLDIVNCKGIDIPTCFSHALSSCKRLRLSDAKLEMLPHGNDKVHYKLESLKLDKCIKLR 550
            +YLD+  CK +         LSS K L LS    E LP    K+   LE L L  C +L 
Sbjct: 902  EYLDLSGCKRLTQLPEDIGCLSSLKELHLSGNNFEHLPQSISKLG-ALEYLDLSGCKRLT 960

Query: 551  TLPDIFIQRCSFIKIASMTGCESFKTLPPSFGLL 652
             LP+  I   S +K   ++G  +F+ LP S   L
Sbjct: 961  QLPE-DIGCLSSLKELHLSG-NNFEHLPQSISKL 992


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