BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra25_contig00025629
         (538 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EOY28616.1| Tetratricopeptide repeat-like superfamily protein...    61   1e-07
ref|XP_006597952.1| PREDICTED: pentatricopeptide repeat-containi...    60   3e-07
gb|ESW10437.1| hypothetical protein PHAVU_009G209400g [Phaseolus...    59   7e-07
ref|XP_003540687.1| PREDICTED: pentatricopeptide repeat-containi...    57   3e-06
ref|XP_004295188.1| PREDICTED: pentatricopeptide repeat-containi...    57   4e-06
ref|XP_002864412.1| pentatricopeptide repeat-containing protein ...    57   4e-06
ref|XP_006594401.1| PREDICTED: pentatricopeptide repeat-containi...    56   5e-06
ref|XP_006594395.1| PREDICTED: pentatricopeptide repeat-containi...    56   5e-06
ref|XP_002522775.1| pentatricopeptide repeat-containing protein,...    56   6e-06
dbj|BAA97283.1| unnamed protein product [Arabidopsis thaliana]         55   8e-06
ref|XP_004487917.1| PREDICTED: pentatricopeptide repeat-containi...    55   8e-06
ref|XP_003545840.1| PREDICTED: pentatricopeptide repeat-containi...    55   8e-06
ref|XP_003594907.1| Pentatricopeptide repeat-containing protein ...    55   8e-06
ref|NP_200395.2| pentatricopeptide repeat-containing protein [Ar...    55   8e-06
sp|Q9LVQ5.2|PP432_ARATH RecName: Full=Pentatricopeptide repeat-c...    55   8e-06

>gb|EOY28616.1| Tetratricopeptide repeat-like superfamily protein, putative
           [Theobroma cacao]
          Length = 578

 Score = 61.2 bits (147), Expect = 1e-07
 Identities = 34/115 (29%), Positives = 62/115 (53%), Gaps = 2/115 (1%)
 Frame = +1

Query: 199 IQTLIRTHKTITPRTISEKALAILGRNPEASHI--IIKAYIQLNMFRDAVKIFHLMKLQG 372
           + +LI++H    P        A  G+N ++S +  +IK Y +  +F + +++F  M++ G
Sbjct: 124 VNSLIQSHPA--PIVADSMIQACKGKNFQSSALSSVIKCYSKHGLFMEGLEVFRKMRIHG 181

Query: 373 TPPSLASCNMVLDALVGFVKTKQLWGVITHMVIMGVTPDTYTFSGYVYSLSKESK 537
             PS+ +CN +LDAL    + K  WG +  M+ +G+ PD +++S     L K  K
Sbjct: 182 FTPSVCACNELLDALQRGNEVKLAWGFLGAMLRVGIEPDQFSWSLVAQILCKNGK 236


>ref|XP_006597952.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g55840-like isoform X1 [Glycine max]
           gi|571520191|ref|XP_006597953.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At5g55840-like isoform X2 [Glycine max]
           gi|571520195|ref|XP_006597954.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At5g55840-like isoform X3 [Glycine max]
           gi|571520199|ref|XP_006597955.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At5g55840-like isoform X4 [Glycine max]
           gi|571520201|ref|XP_006597956.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At5g55840-like isoform X5 [Glycine max]
           gi|571520205|ref|XP_006597957.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At5g55840-like isoform X6 [Glycine max]
          Length = 1086

 Score = 60.1 bits (144), Expect = 3e-07
 Identities = 31/91 (34%), Positives = 48/91 (52%)
 Frame = +1

Query: 265 ILGRNPEASHIIIKAYIQLNMFRDAVKIFHLMKLQGTPPSLASCNMVLDALVGFVKTKQL 444
           I   NP    ++I+  ++  M  DAV+ F+LM  +G  PS+ +CNMVL +LV   K    
Sbjct: 104 ICNSNPAVFDLLIRVCLRNRMVGDAVQTFYLMGFRGLNPSVYTCNMVLGSLVKEQKVDMF 163

Query: 445 WGVITHMVIMGVTPDTYTFSGYVYSLSKESK 537
           W     M+  G+ PD  TF+  + +L +  K
Sbjct: 164 WSFFKGMLAKGICPDVATFNILLNALCERGK 194


>gb|ESW10437.1| hypothetical protein PHAVU_009G209400g [Phaseolus vulgaris]
          Length = 1054

 Score = 58.9 bits (141), Expect = 7e-07
 Identities = 30/91 (32%), Positives = 48/91 (52%)
 Frame = +1

Query: 265 ILGRNPEASHIIIKAYIQLNMFRDAVKIFHLMKLQGTPPSLASCNMVLDALVGFVKTKQL 444
           I   NP    ++I+  ++  M  DAV+ F+LM  +G  PS+ +CNMVL +LV   K    
Sbjct: 104 ICNSNPAVFDLLIRVCLRDKMVGDAVQTFYLMGFRGLKPSVYTCNMVLGSLVKEQKVDMF 163

Query: 445 WGVITHMVIMGVTPDTYTFSGYVYSLSKESK 537
           W     M+  G+ P+  TF+  + +L +  K
Sbjct: 164 WSFFKEMLTKGICPNVATFNILLNALCQRGK 194


>ref|XP_003540687.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
           mitochondrial-like [Glycine max]
          Length = 623

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 41/149 (27%), Positives = 73/149 (48%), Gaps = 4/149 (2%)
 Frame = +1

Query: 103 IEDHHHQEEEEKILKRICVHIKNKRNIHALTEIQTLIRTHKTITPRTI-SEKALA---IL 270
           +++H H  +       ICV  +      ++  IQ LI +  T T RTI  E ALA   + 
Sbjct: 84  LQNHPHSLDLATSSLAICVLYRLPSPKPSINLIQRLILS-PTCTNRTIFDELALARDRVD 142

Query: 271 GRNPEASHIIIKAYIQLNMFRDAVKIFHLMKLQGTPPSLASCNMVLDALVGFVKTKQLWG 450
            +      ++++AY +L    +A++ F+L+K +G  P++ +CN +L   +   +T+  W 
Sbjct: 143 AKTTLIFDLLVRAYCELKKPNEALECFYLIKEKGFVPNIETCNQMLSLFLKLNRTQMAWV 202

Query: 451 VITHMVIMGVTPDTYTFSGYVYSLSKESK 537
           +   M  M +    YTF+  +  L KE K
Sbjct: 203 LYAEMFRMNIRSSLYTFNIMINVLCKEGK 231


>ref|XP_004295188.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g55840-like [Fragaria vesca subsp. vesca]
          Length = 1128

 Score = 56.6 bits (135), Expect = 4e-06
 Identities = 29/87 (33%), Positives = 45/87 (51%)
 Frame = +1

Query: 277 NPEASHIIIKAYIQLNMFRDAVKIFHLMKLQGTPPSLASCNMVLDALVGFVKTKQLWGVI 456
           NP    ++I+ Y++  M   AV+ F+LM L+G  PS  +CNM+L +L    +   +W   
Sbjct: 153 NPSVFDLLIRVYLKEGMVGSAVETFYLMGLRGFRPSGCTCNMILASLAKDRRAASVWSFF 212

Query: 457 THMVIMGVTPDTYTFSGYVYSLSKESK 537
             M+   V PD  TF+  +  L  E K
Sbjct: 213 KEMLAKNVCPDVSTFNILISVLCVEGK 239


>ref|XP_002864412.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297310247|gb|EFH40671.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 1245

 Score = 56.6 bits (135), Expect = 4e-06
 Identities = 27/85 (31%), Positives = 47/85 (55%)
 Frame = +1

Query: 277 NPEASHIIIKAYIQLNMFRDAVKIFHLMKLQGTPPSLASCNMVLDALVGFVKTKQLWGVI 456
           NP    I+I+ Y++  M +D+++IF LM L G  PS+ +CN +L ++V   +   +W  +
Sbjct: 122 NPSVFDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSIVKSCEDVSVWSFL 181

Query: 457 THMVIMGVTPDTYTFSGYVYSLSKE 531
             M+   + PD  TF+  +  L  E
Sbjct: 182 KEMLKRKICPDVATFNILINVLCAE 206


>ref|XP_006594401.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g38730-like isoform X7 [Glycine max]
          Length = 542

 Score = 56.2 bits (134), Expect = 5e-06
 Identities = 35/142 (24%), Positives = 74/142 (52%)
 Frame = +1

Query: 103 IEDHHHQEEEEKILKRICVHIKNKRNIHALTEIQTLIRTHKTITPRTISEKALAILGRNP 282
           + +H H +  + +L++I     +K  + + + + TL+RTH     + ++ + L+ L    
Sbjct: 84  LTEHKHFKTAQHMLEKIA----HKDFLSSPSVLTTLVRTHDN---QEVNSQVLSWL---- 132

Query: 283 EASHIIIKAYIQLNMFRDAVKIFHLMKLQGTPPSLASCNMVLDALVGFVKTKQLWGVITH 462
                 +  Y +  M +DA+++F  M+L    P L +C ++L++L+    T  +W +   
Sbjct: 133 ------VIHYAKSKMTQDAIQVFEQMRLHEVKPHLHACTVLLNSLLKDGVTHMVWKIYKK 186

Query: 463 MVIMGVTPDTYTFSGYVYSLSK 528
           MV +GV P+TY ++   ++ SK
Sbjct: 187 MVQVGVVPNTYIYNCLFHACSK 208


>ref|XP_006594395.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g38730-like isoform X1 [Glycine max]
           gi|571499072|ref|XP_006594396.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At5g38730-like isoform X2 [Glycine max]
           gi|571499074|ref|XP_006594397.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At5g38730-like isoform X3 [Glycine max]
           gi|571499076|ref|XP_006594398.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At5g38730-like isoform X4 [Glycine max]
           gi|571499078|ref|XP_006594399.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At5g38730-like isoform X5 [Glycine max]
           gi|571499080|ref|XP_006594400.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At5g38730-like isoform X6 [Glycine max]
          Length = 587

 Score = 56.2 bits (134), Expect = 5e-06
 Identities = 35/142 (24%), Positives = 74/142 (52%)
 Frame = +1

Query: 103 IEDHHHQEEEEKILKRICVHIKNKRNIHALTEIQTLIRTHKTITPRTISEKALAILGRNP 282
           + +H H +  + +L++I     +K  + + + + TL+RTH     + ++ + L+ L    
Sbjct: 84  LTEHKHFKTAQHMLEKIA----HKDFLSSPSVLTTLVRTHDN---QEVNSQVLSWL---- 132

Query: 283 EASHIIIKAYIQLNMFRDAVKIFHLMKLQGTPPSLASCNMVLDALVGFVKTKQLWGVITH 462
                 +  Y +  M +DA+++F  M+L    P L +C ++L++L+    T  +W +   
Sbjct: 133 ------VIHYAKSKMTQDAIQVFEQMRLHEVKPHLHACTVLLNSLLKDGVTHMVWKIYKK 186

Query: 463 MVIMGVTPDTYTFSGYVYSLSK 528
           MV +GV P+TY ++   ++ SK
Sbjct: 187 MVQVGVVPNTYIYNCLFHACSK 208


>ref|XP_002522775.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223538013|gb|EEF39626.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 1071

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 30/87 (34%), Positives = 46/87 (52%)
 Frame = +1

Query: 277 NPEASHIIIKAYIQLNMFRDAVKIFHLMKLQGTPPSLASCNMVLDALVGFVKTKQLWGVI 456
           NP    ++I+ Y++  M  DA++ F LM ++G  PS+ +CNM+L  LV   K   +W   
Sbjct: 97  NPSVFDLLIRVYLREGMVGDALETFRLMGIRGFNPSVYTCNMLLGKLVKERKVGAVWLFF 156

Query: 457 THMVIMGVTPDTYTFSGYVYSLSKESK 537
             M+   V PD  TF+  +  L  E K
Sbjct: 157 KEMLARRVCPDVSTFNILINVLCVEGK 183


>dbj|BAA97283.1| unnamed protein product [Arabidopsis thaliana]
          Length = 1274

 Score = 55.5 bits (132), Expect = 8e-06
 Identities = 27/85 (31%), Positives = 47/85 (55%)
 Frame = +1

Query: 277 NPEASHIIIKAYIQLNMFRDAVKIFHLMKLQGTPPSLASCNMVLDALVGFVKTKQLWGVI 456
           NP    I+I+ Y++  M +D+++IF LM L G  PS+ +CN +L ++V   +   +W  +
Sbjct: 122 NPSVYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWSFL 181

Query: 457 THMVIMGVTPDTYTFSGYVYSLSKE 531
             M+   + PD  TF+  +  L  E
Sbjct: 182 KEMLKRKICPDVATFNILINVLCAE 206


>ref|XP_004487917.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g55840-like isoform X1 [Cicer arietinum]
           gi|502085442|ref|XP_004487918.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At5g55840-like isoform X2 [Cicer arietinum]
           gi|502085446|ref|XP_004487919.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At5g55840-like isoform X3 [Cicer arietinum]
           gi|502085449|ref|XP_004487920.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At5g55840-like isoform X4 [Cicer arietinum]
           gi|502085454|ref|XP_004487921.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At5g55840-like isoform X5 [Cicer arietinum]
          Length = 1086

 Score = 55.5 bits (132), Expect = 8e-06
 Identities = 30/87 (34%), Positives = 46/87 (52%)
 Frame = +1

Query: 277 NPEASHIIIKAYIQLNMFRDAVKIFHLMKLQGTPPSLASCNMVLDALVGFVKTKQLWGVI 456
           NP    ++I+  ++  M  DAV+ FHLM  +G  PS+ +CNMVL +LV   K    W   
Sbjct: 108 NPAVFDLLIRVCLREKMVGDAVQTFHLMGFRGLKPSVYTCNMVLGSLVKDHKVDLFWSFF 167

Query: 457 THMVIMGVTPDTYTFSGYVYSLSKESK 537
             M+   V P+  TF+  + +L +  K
Sbjct: 168 KGMLEKKVCPNVATFNILLNALCERGK 194


>ref|XP_003545840.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g38730-like [Glycine max]
          Length = 587

 Score = 55.5 bits (132), Expect = 8e-06
 Identities = 34/142 (23%), Positives = 73/142 (51%)
 Frame = +1

Query: 103 IEDHHHQEEEEKILKRICVHIKNKRNIHALTEIQTLIRTHKTITPRTISEKALAILGRNP 282
           + +H H +  + +L++I     +K  + + + + TL+RTH     + ++ + L+ L    
Sbjct: 84  LTEHKHFKTAQHVLEKIA----HKDFLSSPSVLSTLVRTHDN---QEVNSQVLSWL---- 132

Query: 283 EASHIIIKAYIQLNMFRDAVKIFHLMKLQGTPPSLASCNMVLDALVGFVKTKQLWGVITH 462
                 +  Y +  M +DA+++F  M+L    P L +C ++L++L+    T  +W +   
Sbjct: 133 ------VIHYAKSKMTQDAIQVFEQMRLHEVKPHLHACTVLLNSLLKDGVTHMVWKIYKR 186

Query: 463 MVIMGVTPDTYTFSGYVYSLSK 528
           MV +GV P+ Y ++   ++ SK
Sbjct: 187 MVQVGVVPNIYIYNCLFHACSK 208


>ref|XP_003594907.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355483955|gb|AES65158.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 1385

 Score = 55.5 bits (132), Expect = 8e-06
 Identities = 29/87 (33%), Positives = 47/87 (54%)
 Frame = +1

Query: 277 NPEASHIIIKAYIQLNMFRDAVKIFHLMKLQGTPPSLASCNMVLDALVGFVKTKQLWGVI 456
           NP    ++I+  ++ NM  DAV+ F LM  +G  PS+ +CNMVL +LV   +    W   
Sbjct: 108 NPAVFDLLIRVCLRENMVGDAVEAFRLMGFRGFSPSVFTCNMVLGSLVKDREVDLFWSFF 167

Query: 457 THMVIMGVTPDTYTFSGYVYSLSKESK 537
             M+   V+P+  TF+  + +L +  K
Sbjct: 168 KEMIANRVSPNVATFNILLNALCERGK 194


>ref|NP_200395.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|332009303|gb|AED96686.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 1136

 Score = 55.5 bits (132), Expect = 8e-06
 Identities = 27/85 (31%), Positives = 47/85 (55%)
 Frame = +1

Query: 277 NPEASHIIIKAYIQLNMFRDAVKIFHLMKLQGTPPSLASCNMVLDALVGFVKTKQLWGVI 456
           NP    I+I+ Y++  M +D+++IF LM L G  PS+ +CN +L ++V   +   +W  +
Sbjct: 162 NPSVYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWSFL 221

Query: 457 THMVIMGVTPDTYTFSGYVYSLSKE 531
             M+   + PD  TF+  +  L  E
Sbjct: 222 KEMLKRKICPDVATFNILINVLCAE 246


>sp|Q9LVQ5.2|PP432_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g55840
          Length = 1096

 Score = 55.5 bits (132), Expect = 8e-06
 Identities = 27/85 (31%), Positives = 47/85 (55%)
 Frame = +1

Query: 277 NPEASHIIIKAYIQLNMFRDAVKIFHLMKLQGTPPSLASCNMVLDALVGFVKTKQLWGVI 456
           NP    I+I+ Y++  M +D+++IF LM L G  PS+ +CN +L ++V   +   +W  +
Sbjct: 122 NPSVYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWSFL 181

Query: 457 THMVIMGVTPDTYTFSGYVYSLSKE 531
             M+   + PD  TF+  +  L  E
Sbjct: 182 KEMLKRKICPDVATFNILINVLCAE 206