BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra25_contig00025358
         (1063 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ADE76390.1| unknown [Picea sitchensis]                             322   2e-85
ref|XP_006350671.1| PREDICTED: DNA repair protein XRCC4-like iso...   268   3e-69
ref|XP_004241021.1| PREDICTED: DNA repair protein XRCC4-like iso...   267   5e-69
ref|XP_006852217.1| hypothetical protein AMTR_s00049p00133960 [A...   259   1e-66
ref|XP_006420162.1| hypothetical protein CICLE_v10005690mg [Citr...   258   2e-66
ref|XP_002517008.1| DNA-repair protein XRCC4, putative [Ricinus ...   256   1e-65
ref|XP_006489536.1| PREDICTED: DNA repair protein XRCC4-like [Ci...   256   1e-65
ref|XP_006420172.1| hypothetical protein CICLE_v10007171mg, part...   255   2e-65
ref|XP_002284388.2| PREDICTED: DNA repair protein XRCC4 [Vitis v...   253   1e-64
emb|CBI26376.3| unnamed protein product [Vitis vinifera]              253   1e-64
gb|EOY05930.1| DNA repair protein XRCC4, putative isoform 1 [The...   252   2e-64
ref|XP_006420167.1| hypothetical protein CICLE_v10005689mg [Citr...   248   2e-63
gb|EXB29874.1| DNA repair protein XRCC4 [Morus notabilis]             245   2e-62
ref|XP_002883399.1| hypothetical protein ARALYDRAFT_479818 [Arab...   244   3e-62
ref|XP_002315726.1| predicted protein [Populus trichocarpa]           243   9e-62
dbj|BAF03494.1| XRCC4 homolog [Populus nigra]                         243   9e-62
gb|EOY05931.1| DNA ligase iv-binding protein XRCC4 isoform 2 [Th...   243   1e-61
ref|XP_004290386.1| PREDICTED: DNA repair protein XRCC4-like iso...   243   1e-61
gb|EOY05932.1| DNA ligase iv-binding protein XRCC4 isoform 3 [Th...   242   2e-61
ref|NP_188951.2| DNA repair protein XRCC4-like protein [Arabidop...   241   3e-61

>gb|ADE76390.1| unknown [Picea sitchensis]
          Length = 334

 Score =  322 bits (824), Expect = 2e-85
 Identities = 185/334 (55%), Positives = 218/334 (65%), Gaps = 22/334 (6%)
 Frame = -2

Query: 1038 ASEETCARLET-ATNGEVVFVKGSWFPTHFTLFITDGLHAWITKASEKNVADRASQWDQS 862
            AS +TC R+E    N +V++VK +WFPTHF+L ITDGLHAWI   SEKNVADRASQWDQS
Sbjct: 3    ASADTCVRIEANGANRDVIYVKSTWFPTHFSLSITDGLHAWICDGSEKNVADRASQWDQS 62

Query: 861  VSEYLEDARHYLGNQQPGSIYSFQDAGNDHMRLSWTLEKDGTKLECRWKCERATNDQKVT 682
            VSEYLEDA+ YL  QQPGS Y+ +DAGN  +RLSWTLEK GTKLE RWKC++A N+QKV 
Sbjct: 63   VSEYLEDAQRYLSYQQPGSAYTIKDAGNGSIRLSWTLEKQGTKLEWRWKCDKAPNEQKVI 122

Query: 681  KSILDFLMEANTKLSDEVVRKTRSFERMKVEAEKCLVQSEKLKNEKTEFEHDVYAKFVAV 502
              ILDFLM+ANT+LS+EVVRKTRSF+RMKVEAEKCL QSEK KNEK EFE  ++AKFVAV
Sbjct: 123  SDILDFLMDANTRLSEEVVRKTRSFDRMKVEAEKCLAQSEKFKNEKAEFETTIFAKFVAV 182

Query: 501  LNSKKAKLRELREKSVNLRQQEKAEDED-GEYSAEET-------DRXXXXXXXXXXXSKT 346
            LNSKKAKLRELREK ++    +K   ED  ++S EET       D            SK 
Sbjct: 183  LNSKKAKLRELREKCLHSEPAKKNVREDASDFSEEETDMESDQNDNEESSAGPTHSDSKD 242

Query: 345  SEDADTTRKISKSKPYLAGKSKANTDIEEEKPTQKTNTDDAKLQNISEP----------- 199
            SE A+  +K  KS     G S A ++   E   +K N+ D K    SEP           
Sbjct: 243  SEGAEINKKPLKS---TGGVSPAPSNKATENRLEKQNSTDEKKNITSEPTDPDATQVLGD 299

Query: 198  AKSLVDED--EXXXXXXXXXXXSNYTSAPKRRRR 103
            A+   D D  E           S YTSAPK+RRR
Sbjct: 300  AEISKDSDHGEPSASAAGLLAVSEYTSAPKKRRR 333


>ref|XP_006350671.1| PREDICTED: DNA repair protein XRCC4-like isoform X1 [Solanum
            tuberosum]
          Length = 267

 Score =  268 bits (685), Expect = 3e-69
 Identities = 136/221 (61%), Positives = 162/221 (73%)
 Frame = -2

Query: 1050 METGASEETCARLETATNGEVVFVKGSWFPTHFTLFITDGLHAWITKASEKNVADRASQW 871
            M + + + TC +L   +N E +FVKG+WF +HF LFITDGL +W   ASE+ V +RASQW
Sbjct: 1    MGSASPKHTCLKL-VISNKEQIFVKGTWFSSHFDLFITDGLQSWTCHASEEEVEERASQW 59

Query: 870  DQSVSEYLEDARHYLGNQQPGSIYSFQDAGNDHMRLSWTLEKDGTKLECRWKCERATNDQ 691
            DQ VSEY++ A  YLG QQPGS Y F DAG  H RLSWT EK+GTKLE RWKC+ ++N +
Sbjct: 60   DQPVSEYIDLAEKYLGFQQPGSAYGFDDAGTGHKRLSWTFEKEGTKLEWRWKCQPSSNSK 119

Query: 690  KVTKSILDFLMEANTKLSDEVVRKTRSFERMKVEAEKCLVQSEKLKNEKTEFEHDVYAKF 511
            K T  ILDFLM+AN +LSDEVV KT SFERMKVEAEKCL QSEKL  EK EFE  +YAKF
Sbjct: 120  KTTADILDFLMDANIRLSDEVVSKTESFERMKVEAEKCLTQSEKLSREKEEFESAIYAKF 179

Query: 510  VAVLNSKKAKLRELREKSVNLRQQEKAEDEDGEYSAEETDR 388
            + VLNSKK KLRELR+K   L +Q  A +E  E  A+ TDR
Sbjct: 180  LGVLNSKKKKLRELRDK---LSKQGTAVEEPVEEDAQSTDR 217


>ref|XP_004241021.1| PREDICTED: DNA repair protein XRCC4-like isoform 1 [Solanum
            lycopersicum]
          Length = 254

 Score =  267 bits (683), Expect = 5e-69
 Identities = 135/245 (55%), Positives = 169/245 (68%)
 Frame = -2

Query: 1050 METGASEETCARLETATNGEVVFVKGSWFPTHFTLFITDGLHAWITKASEKNVADRASQW 871
            M + + + TC +L   +N E +FVKG+WF ++F LFITDGLH+W   ASE+ V +RASQW
Sbjct: 1    MGSPSPKHTCLKL-VISNKEQIFVKGTWFSSYFDLFITDGLHSWTCHASEEEVEERASQW 59

Query: 870  DQSVSEYLEDARHYLGNQQPGSIYSFQDAGNDHMRLSWTLEKDGTKLECRWKCERATNDQ 691
            DQ VSEY++    YLG QQPGS+Y F DAG  H RLSWT EK+GTKLE RWKC+ ++N +
Sbjct: 60   DQPVSEYIDLGEKYLGFQQPGSVYGFDDAGTGHKRLSWTFEKEGTKLEWRWKCQSSSNSK 119

Query: 690  KVTKSILDFLMEANTKLSDEVVRKTRSFERMKVEAEKCLVQSEKLKNEKTEFEHDVYAKF 511
            K T  ILDFLM+AN +LSDEVV KT SFERMKVEAEKCL QSEKL  EK EFE  +YAKF
Sbjct: 120  KTTADILDFLMDANIRLSDEVVSKTESFERMKVEAEKCLTQSEKLSKEKEEFESAIYAKF 179

Query: 510  VAVLNSKKAKLRELREKSVNLRQQEKAEDEDGEYSAEETDRXXXXXXXXXXXSKTSEDAD 331
            + VLN+KK KLRELR+K   L +Q  + +E  E  A+ TDR               +D  
Sbjct: 180  LGVLNAKKKKLRELRDK---LSKQATSVEEPVEEDAQSTDRTETFDEEISGEEVEKDDVG 236

Query: 330  TTRKI 316
            T++ +
Sbjct: 237  TSKDV 241


>ref|XP_006852217.1| hypothetical protein AMTR_s00049p00133960 [Amborella trichopoda]
            gi|548855821|gb|ERN13684.1| hypothetical protein
            AMTR_s00049p00133960 [Amborella trichopoda]
          Length = 235

 Score =  259 bits (662), Expect = 1e-66
 Identities = 130/216 (60%), Positives = 163/216 (75%), Gaps = 3/216 (1%)
 Frame = -2

Query: 1032 EETCARLETATNGEVVFVKGSWFPTHFTLFITDGLHAWITKASEKNVADRASQWDQSVSE 853
            + +C RL+  +   V ++ G+W P+ F+L ITDGL  W   ASE+ V +RA+QWDQ VSE
Sbjct: 6    KHSCMRLDLGSKDGVFYIMGTWLPSRFSLSITDGLRTWTCNASEEEVENRANQWDQLVSE 65

Query: 852  YLEDARHYLGNQQPGSIYSFQDAGNDHMRLSWTLEKDGTKLECRWKCERATNDQKVTKSI 673
            YLE A HYLG QQPGS+Y+F  AG+++ RLSW  EK GTKLE RWKCE++++D+KVT SI
Sbjct: 66   YLETAEHYLGFQQPGSVYAFTPAGDENRRLSWAYEKQGTKLEWRWKCEKSSDDKKVTASI 125

Query: 672  LDFLMEANTKLSDEVVRKTRSFERMKVEAEKCLVQSEKLKNEKTEFEHDVYAKFVAVLNS 493
            LDFLMEANT+LSDEVVR TRSFERMKVEAEKCL QSE+   +K EFE   YAKFVAVLNS
Sbjct: 126  LDFLMEANTRLSDEVVRNTRSFERMKVEAEKCLAQSERFNIDKAEFESAAYAKFVAVLNS 185

Query: 492  KKAKLRELRE---KSVNLRQQEKAEDEDGEYSAEET 394
            KK KLR+LR+   K+ +    + A+DED   S+E+T
Sbjct: 186  KKMKLRDLRDRLSKTEHPHPGKLAQDEDD--SSEKT 219


>ref|XP_006420162.1| hypothetical protein CICLE_v10005690mg [Citrus clementina]
            gi|557522035|gb|ESR33402.1| hypothetical protein
            CICLE_v10005690mg [Citrus clementina]
          Length = 256

 Score =  258 bits (660), Expect = 2e-66
 Identities = 129/222 (58%), Positives = 161/222 (72%), Gaps = 6/222 (2%)
 Frame = -2

Query: 1038 ASEETCARLETATNGEVVFVKGSWFPTHFTLFITDGLHAWITKASEKNVADRASQWDQSV 859
            A+  TC +LE     + +FVKG+WF THF L ITDGL+AW+  ASE+ V DRA+ WDQ V
Sbjct: 3    ATSHTCLKLEIPDATDPIFVKGTWFQTHFDLSITDGLNAWLCNASEEQVKDRAALWDQPV 62

Query: 858  SEYLEDARHYLGNQQPGSIYSFQDAGNDHMRLSWTLEKDGTKLECRWKCERATNDQKVTK 679
            +EY++ A  YLG QQPGS+Y F DA +   RLSWT EK+GTKLE RWKC  A N +KVT 
Sbjct: 63   TEYVKLAERYLGFQQPGSVYGFTDAADGCKRLSWTFEKEGTKLEWRWKCGSAPNSKKVTA 122

Query: 678  SILDFLMEANTKLSDEVVRKTRSFERMKVEAEKCLVQSEKLKNEKTEFEHDVYAKFVAVL 499
             ILDFLM+AN +LSDEVV KT+SFER+KVEAEKCL QSE+ KNEK EFE  +YAKF+ VL
Sbjct: 123  GILDFLMDANIRLSDEVVTKTQSFERLKVEAEKCLAQSERFKNEKLEFESAIYAKFLGVL 182

Query: 498  NSKKAKLRELREK------SVNLRQQEKAEDEDGEYSAEETD 391
            NSKK+KLRELR+K        +L+Q+E++ D+   +     D
Sbjct: 183  NSKKSKLRELRDKLSKQAVMGDLQQEEQSTDKTESFDEGSDD 224


>ref|XP_002517008.1| DNA-repair protein XRCC4, putative [Ricinus communis]
            gi|223543643|gb|EEF45171.1| DNA-repair protein XRCC4,
            putative [Ricinus communis]
          Length = 265

 Score =  256 bits (654), Expect = 1e-65
 Identities = 135/250 (54%), Positives = 169/250 (67%), Gaps = 8/250 (3%)
 Frame = -2

Query: 1047 ETGASEETCARLETATNGEVVFVKGSWFPTHFTLFITDGLHAWITKASEKNVADRASQWD 868
            E   +  TC +LE     E +FVKG+WF +HF L ITDGL+AW+  A+E  V +RA+QWD
Sbjct: 9    EAETARHTCLKLEIT---EPIFVKGTWFDSHFHLSITDGLNAWVCNATEGQVKERAAQWD 65

Query: 867  QSVSEYLEDARHYLGNQQPGSIYSFQDAGNDHMRLSWTLEKDGTKLECRWKCERATNDQK 688
            Q VSEY+  A HYLG QQPGSIY F DAG+ H RLSWT EK+GTKLE RWKC+ + +++ 
Sbjct: 66   QPVSEYINLAEHYLGFQQPGSIYRFADAGDSHKRLSWTFEKEGTKLEWRWKCQPSPDNKM 125

Query: 687  VTKSILDFLMEANTKLSDEVVRKTRSFERMKVEAEKCLVQSEKLKNEKTEFEHDVYAKFV 508
             T  ILDFLM+AN +LS+EVV+KT SFER+K EA+KCL QSE+   EKTEFE  +YAKF+
Sbjct: 126  TTAGILDFLMDANIRLSEEVVKKTHSFERLKEEADKCLTQSERFAGEKTEFESSIYAKFL 185

Query: 507  AVLNSKKAKLRELR------EKSVNLRQQEKAEDEDGEYSAEE--TDRXXXXXXXXXXXS 352
            AVLNSKK KLR+LR      E S  L Q+E+ E  D   S EE  +D            +
Sbjct: 186  AVLNSKKRKLRQLRDQLSKKEASGKLPQEEEEESTDKTESFEEDSSDGDKSEEEPPEKVT 245

Query: 351  KTSEDADTTR 322
             TSED  ++R
Sbjct: 246  GTSEDKPSSR 255


>ref|XP_006489536.1| PREDICTED: DNA repair protein XRCC4-like [Citrus sinensis]
          Length = 256

 Score =  256 bits (653), Expect = 1e-65
 Identities = 128/221 (57%), Positives = 160/221 (72%), Gaps = 6/221 (2%)
 Frame = -2

Query: 1035 SEETCARLETATNGEVVFVKGSWFPTHFTLFITDGLHAWITKASEKNVADRASQWDQSVS 856
            +  TC +LE +   + +FVKG+WF THF L ITDGL+ W+  ASE+ V DRA+QWDQ V+
Sbjct: 3    TRHTCLKLEISDATDPIFVKGTWFETHFDLSITDGLNVWLCNASEEQVKDRAAQWDQPVT 62

Query: 855  EYLEDARHYLGNQQPGSIYSFQDAGNDHMRLSWTLEKDGTKLECRWKCERATNDQKVTKS 676
            EY++ A  YLG QQPGS+Y F DA +   RLSWT EK+GTKLE RWKC  A N +KVT  
Sbjct: 63   EYIKLAERYLGFQQPGSVYGFTDAADGCKRLSWTFEKEGTKLEWRWKCGPAPNSKKVTAG 122

Query: 675  ILDFLMEANTKLSDEVVRKTRSFERMKVEAEKCLVQSEKLKNEKTEFEHDVYAKFVAVLN 496
            ILDFLM+AN +LSDEVV KT+SFER+KVEAEKCL QSE+  NEK EFE  +YAKF+ VLN
Sbjct: 123  ILDFLMDANIRLSDEVVTKTQSFERLKVEAEKCLAQSERFNNEKLEFESAIYAKFLGVLN 182

Query: 495  SKKAKLRELREK------SVNLRQQEKAEDEDGEYSAEETD 391
            SKK+KLRELR+K        +L+Q+E+   +  E   E +D
Sbjct: 183  SKKSKLRELRDKLSKQAVMGDLQQEEEQSTDKTESFDEGSD 223


>ref|XP_006420172.1| hypothetical protein CICLE_v10007171mg, partial [Citrus clementina]
           gi|557522045|gb|ESR33412.1| hypothetical protein
           CICLE_v10007171mg, partial [Citrus clementina]
          Length = 243

 Score =  255 bits (651), Expect = 2e-65
 Identities = 131/229 (57%), Positives = 164/229 (71%), Gaps = 2/229 (0%)
 Frame = -2

Query: 999 NGEVVFVKGSWFPTHFTLFITDGLHAWITKASEKNVADRASQWDQSVSEYLEDARHYLGN 820
           NG+  +VKG+WF THF L ITDGL+AW+  ASE+ V DRA+QWDQ V+EY++ A  YLG 
Sbjct: 2   NGDETYVKGTWFQTHFDLSITDGLNAWLCNASEEQVKDRAAQWDQPVTEYVKLAERYLGF 61

Query: 819 QQPGSIYSFQDAGNDHMRLSWTLEKDGTKLECRWKCERATNDQKVTKSILDFLMEANTKL 640
           QQPGS+Y+F DA +   RLSWT EK+GTKLE RWKC  A N +KVT  ILDFLM+AN +L
Sbjct: 62  QQPGSVYAFTDAADGCKRLSWTFEKEGTKLEWRWKCGSAPNSKKVTAGILDFLMDANIRL 121

Query: 639 SDEVVRKTRSFERMKVEAEKCLVQSEKLKNEKTEFEHDVYAKFVAVLNSKKAKLRELREK 460
           SDEVV KT+SFER+KVEAEKCL QSE+ KNEK EFE  VYAKF+ VLNSKK+KLRELR+K
Sbjct: 122 SDEVVTKTQSFERLKVEAEKCLAQSERFKNEKLEFESAVYAKFLGVLNSKKSKLRELRDK 181

Query: 459 SVNLRQQEKAED--EDGEYSAEETDRXXXXXXXXXXXSKTSEDADTTRK 319
              L +Q    D  ++ E S ++T+             + ++D  +T K
Sbjct: 182 ---LSKQAVMGDLQQEEEQSTDKTESFDEGSDDDKSEEEPAKDITSTSK 227


>ref|XP_002284388.2| PREDICTED: DNA repair protein XRCC4 [Vitis vinifera]
          Length = 259

 Score =  253 bits (645), Expect = 1e-64
 Identities = 128/241 (53%), Positives = 162/241 (67%), Gaps = 6/241 (2%)
 Frame = -2

Query: 1026 TCARLETATNGEVVFVKGSWFPTHFTLFITDGLHAWITKASEKNVADRASQWDQSVSEYL 847
            +C +L+     E +F+K +WFP+HF L ITDGLHAW+  ASE  V +RA+QWDQ VS+Y+
Sbjct: 8    SCLKLQIPNQSEPIFIKATWFPSHFHLSITDGLHAWLCNASEDEVRERAAQWDQPVSDYI 67

Query: 846  EDARHYLGNQQPGSIYSFQDAGNDHMRLSWTLEKDGTKLECRWKCERATNDQKVTKSILD 667
              A  +LG QQPGS+Y F DAG+ H RLSWT EK+GTKLE RWKC  + + +  T  +LD
Sbjct: 68   ALAERFLGFQQPGSVYGFSDAGDGHRRLSWTFEKEGTKLEWRWKCGLSPDSRSTTAGVLD 127

Query: 666  FLMEANTKLSDEVVRKTRSFERMKVEAEKCLVQSEKLKNEKTEFEHDVYAKFVAVLNSKK 487
            FLM AN +LS+EVV KT+SFER+KVEAEKCL QSEK  NEK EFE  +YAKF+ VLNSKK
Sbjct: 128  FLMNANIRLSEEVVIKTQSFERLKVEAEKCLAQSEKFNNEKAEFESAIYAKFLGVLNSKK 187

Query: 486  AKLRELR-----EKSVNLRQQEKAEDEDGEYS-AEETDRXXXXXXXXXXXSKTSEDADTT 325
            AKLRELR     E++     QE+ E  D   S  +E+D            + TS+   T+
Sbjct: 188  AKLRELRDQISKEETTGKLPQEEDESTDKTLSFDDESDNEAIEEESSKNLTGTSKHVSTS 247

Query: 324  R 322
            R
Sbjct: 248  R 248


>emb|CBI26376.3| unnamed protein product [Vitis vinifera]
          Length = 258

 Score =  253 bits (645), Expect = 1e-64
 Identities = 128/241 (53%), Positives = 162/241 (67%), Gaps = 6/241 (2%)
 Frame = -2

Query: 1026 TCARLETATNGEVVFVKGSWFPTHFTLFITDGLHAWITKASEKNVADRASQWDQSVSEYL 847
            +C +L+     E +F+K +WFP+HF L ITDGLHAW+  ASE  V +RA+QWDQ VS+Y+
Sbjct: 8    SCLKLQIPNQSEPIFIKATWFPSHFHLSITDGLHAWLCNASEDEVRERAAQWDQPVSDYI 67

Query: 846  EDARHYLGNQQPGSIYSFQDAGNDHMRLSWTLEKDGTKLECRWKCERATNDQKVTKSILD 667
              A  +LG QQPGS+Y F DAG+ H RLSWT EK+GTKLE RWKC  + + +  T  +LD
Sbjct: 68   ALAERFLGFQQPGSVYGFSDAGDGHRRLSWTFEKEGTKLEWRWKCGLSPDSRSTTAGVLD 127

Query: 666  FLMEANTKLSDEVVRKTRSFERMKVEAEKCLVQSEKLKNEKTEFEHDVYAKFVAVLNSKK 487
            FLM AN +LS+EVV KT+SFER+KVEAEKCL QSEK  NEK EFE  +YAKF+ VLNSKK
Sbjct: 128  FLMNANIRLSEEVVIKTQSFERLKVEAEKCLAQSEKFNNEKAEFESAIYAKFLGVLNSKK 187

Query: 486  AKLRELR-----EKSVNLRQQEKAEDEDGEYS-AEETDRXXXXXXXXXXXSKTSEDADTT 325
            AKLRELR     E++     QE+ E  D   S  +E+D            + TS+   T+
Sbjct: 188  AKLRELRDQISKEETTGKLPQEEDESTDKTLSFDDESDNEAIEEESSKNLTGTSKHVSTS 247

Query: 324  R 322
            R
Sbjct: 248  R 248


>gb|EOY05930.1| DNA repair protein XRCC4, putative isoform 1 [Theobroma cacao]
          Length = 263

 Score =  252 bits (643), Expect = 2e-64
 Identities = 128/222 (57%), Positives = 160/222 (72%), Gaps = 5/222 (2%)
 Frame = -2

Query: 1050 METGASE---ETCARLETATNGEVVFVKGSWFPTHFTLFITDGLHAWITKASEKNVADRA 880
            MET +S     TC +LE  +  E +FVKG+WF  HF + ITDGLHAW+  A+E+ V +RA
Sbjct: 1    METSSSSTTRHTCLKLEIPST-EPIFVKGTWFDAHFDISITDGLHAWVCNATEEEVKERA 59

Query: 879  SQWDQSVSEYLEDARHYLGNQQPGSIYSFQDAGNDHMRLSWTLEKDGTKLECRWKCERAT 700
            +QWDQ V+EY+E A  YLG QQ GS+Y F DAG+DH RLSW  EK+GTKLE RWK   + 
Sbjct: 60   AQWDQPVTEYIELAERYLGFQQSGSVYRFADAGDDHKRLSWAFEKEGTKLEWRWKFRPSP 119

Query: 699  NDQKVTKSILDFLMEANTKLSDEVVRKTRSFERMKVEAEKCLVQSEKLKNEKTEFEHDVY 520
            + QK+T  ILDFLM+AN +LS+EV RKT+SFE++KVEAEKCL QSE+  NEK EFE ++Y
Sbjct: 120  DSQKITGGILDFLMDANIRLSEEVFRKTQSFEKLKVEAEKCLEQSERSTNEKMEFESEIY 179

Query: 519  AKFVAVLNSKKAKLRELREKSVNLRQQEKA--EDEDGEYSAE 400
            AKF+ VLNSKKAKLRELR++        KA  E+ED     E
Sbjct: 180  AKFLGVLNSKKAKLRELRDQLSKQETTGKALMEEEDSTDKTE 221


>ref|XP_006420167.1| hypothetical protein CICLE_v10005689mg [Citrus clementina]
            gi|557522040|gb|ESR33407.1| hypothetical protein
            CICLE_v10005689mg [Citrus clementina]
          Length = 256

 Score =  248 bits (634), Expect = 2e-63
 Identities = 124/211 (58%), Positives = 153/211 (72%), Gaps = 5/211 (2%)
 Frame = -2

Query: 1035 SEETCARLETATNGEVVFVKGSWFPTHFTLFITDGLHAWITKASEKNVADRASQWDQSVS 856
            +  TC +LE     + +F KG+WF THF L ITDGL+AW+  ASE+ V DRA+QWDQ V+
Sbjct: 3    TRHTCLKLEIPDATDPIFAKGTWFQTHFDLSITDGLNAWLCNASEEQVKDRAAQWDQPVT 62

Query: 855  EYLEDARHYLGNQQPGSIYSFQDAGNDHMRLSWTLEKDGTKLECRWKCERATNDQKVTKS 676
            EY++ A  YLG QQPGS+Y F DA +   RLSWT EK+GTKLE RWK   A N +KVT  
Sbjct: 63   EYIKLAERYLGFQQPGSVYGFTDAADGCKRLSWTFEKEGTKLEWRWKFGPAPNSKKVTAG 122

Query: 675  ILDFLMEANTKLSDEVVRKTRSFERMKVEAEKCLVQSEKLKNEKTEFEHDVYAKFVAVLN 496
            ILDFLM+AN +LSDEVV KT+SFER+KVE +KCL QSE+ KNEK EFE  +Y+KF+ VLN
Sbjct: 123  ILDFLMDANIRLSDEVVTKTQSFERLKVETQKCLAQSERFKNEKVEFESAIYSKFLGVLN 182

Query: 495  SKKAKLRELREK-----SVNLRQQEKAEDED 418
            SKK+KLRELR+K      +   QQE+ E  D
Sbjct: 183  SKKSKLRELRDKLSKQAVMGDLQQEEEESTD 213


>gb|EXB29874.1| DNA repair protein XRCC4 [Morus notabilis]
          Length = 257

 Score =  245 bits (625), Expect = 2e-62
 Identities = 123/214 (57%), Positives = 153/214 (71%)
 Frame = -2

Query: 1038 ASEETCARLETATNGEVVFVKGSWFPTHFTLFITDGLHAWITKASEKNVADRASQWDQSV 859
            +   TC +LE   + + +FV  +WFP+HF L +TDG HAWI  ASE+ V DRA+QWDQ V
Sbjct: 4    SKRHTCLKLEPK-DSDPIFVNATWFPSHFNLSVTDGHHAWICHASEEEVRDRAAQWDQPV 62

Query: 858  SEYLEDARHYLGNQQPGSIYSFQDAGNDHMRLSWTLEKDGTKLECRWKCERATNDQKVTK 679
             EY+  A  YLG QQP S+Y+F DAG+ H RLSWT EK+GTKL+ RWKC+ A + +K T 
Sbjct: 63   PEYVALAERYLGFQQPDSVYAFADAGDGHKRLSWTFEKEGTKLQWRWKCQPAPDSKKTTA 122

Query: 678  SILDFLMEANTKLSDEVVRKTRSFERMKVEAEKCLVQSEKLKNEKTEFEHDVYAKFVAVL 499
              LDFLM+AN +LS+EVV K++SFER+KVEAEKCL QSEK+ NEK EFE  +YAKF+ VL
Sbjct: 123  ETLDFLMDANIRLSEEVVIKSQSFERLKVEAEKCLEQSEKISNEKMEFESTLYAKFLGVL 182

Query: 498  NSKKAKLRELREKSVNLRQQEKAEDEDGEYSAEE 397
            NSKKAKLRELR       Q EK +   G+   EE
Sbjct: 183  NSKKAKLRELR------AQLEKNDPAAGKLPQEE 210


>ref|XP_002883399.1| hypothetical protein ARALYDRAFT_479818 [Arabidopsis lyrata subsp.
            lyrata] gi|297329239|gb|EFH59658.1| hypothetical protein
            ARALYDRAFT_479818 [Arabidopsis lyrata subsp. lyrata]
          Length = 248

 Score =  244 bits (624), Expect = 3e-62
 Identities = 120/211 (56%), Positives = 156/211 (73%)
 Frame = -2

Query: 1050 METGASEETCARLETATNGEVVFVKGSWFPTHFTLFITDGLHAWITKASEKNVADRASQW 871
            +E+  ++ TC RLE +   + +FVKG+W  +HF + +TDG  +WI  A+E+ VA+RA+QW
Sbjct: 2    VESEKTKHTCLRLEIS-GADPIFVKGTWHNSHFDISVTDGSSSWICNATEEEVAERAAQW 60

Query: 870  DQSVSEYLEDARHYLGNQQPGSIYSFQDAGNDHMRLSWTLEKDGTKLECRWKCERATNDQ 691
            DQ VSEYLE A  YLG QQP S+Y F DA     RLSWT EK+GTKLE RWKC+ + + +
Sbjct: 61   DQPVSEYLELAERYLGFQQPNSVYGFSDALEGSKRLSWTFEKEGTKLEWRWKCKPSHDSK 120

Query: 690  KVTKSILDFLMEANTKLSDEVVRKTRSFERMKVEAEKCLVQSEKLKNEKTEFEHDVYAKF 511
            K+T  ILDFL+EAN +LS+EVV KTRSFE+MK EAE+CL Q EKL  EKTEFE+  YAKF
Sbjct: 121  KITVGILDFLLEANIRLSEEVVNKTRSFEKMKCEAERCLAQGEKLCEEKTEFENATYAKF 180

Query: 510  VAVLNSKKAKLRELREKSVNLRQQEKAEDED 418
            ++VLN+KKAKLR LR+K  ++R  E+ E  D
Sbjct: 181  LSVLNAKKAKLRALRDKGDSVRAVEEEESTD 211


>ref|XP_002315726.1| predicted protein [Populus trichocarpa]
          Length = 233

 Score =  243 bits (620), Expect = 9e-62
 Identities = 123/222 (55%), Positives = 158/222 (71%), Gaps = 1/222 (0%)
 Frame = -2

Query: 1050 METGASEETCARLETATNGEVVFVKGSWFPTHFTLFITDGLHAWITKASEKNVADRASQW 871
            ME+  +  TC +LE     E +F+KG+WFP HF L ITDGL++W   A+E+ V DRA+QW
Sbjct: 1    MESTMARHTCLKLEIP---EPIFIKGTWFPFHFNLSITDGLNSWFCNATEEEVRDRAAQW 57

Query: 870  DQSVSEYLEDARHYLGNQQPGSIYSFQDAGNDHMRLSWTLEKDGTKLECRWKCERATNDQ 691
            DQ VS Y++ A  +LG Q PGS+Y F DAG  + RLSWT EK+GTKLE RWKC+ + + +
Sbjct: 58   DQPVSTYIQLAEKHLGFQIPGSVYKFTDAGEGNKRLSWTFEKEGTKLEWRWKCQPSPDTK 117

Query: 690  KVTKSILDFLMEANTKLSDEVVRKTRSFERMKVEAEKCLVQSEKLKNEKTEFEHDVYAKF 511
            K T  ILDFLM+AN +LS+EVVRKT+SFE++K EAEKCL QSEK  ++K EFE  VYAKF
Sbjct: 118  KTTTLILDFLMDANIRLSEEVVRKTQSFEQLKGEAEKCLAQSEKFNSQKMEFEAAVYAKF 177

Query: 510  VAVLNSKKAKLRELREK-SVNLRQQEKAEDEDGEYSAEETDR 388
            + VLNSKK KLRELR++ S      E A++E+     E  DR
Sbjct: 178  LGVLNSKKRKLRELRDQLSKKEISGESAQEEEDSDKTESFDR 219


>dbj|BAF03494.1| XRCC4 homolog [Populus nigra]
          Length = 255

 Score =  243 bits (620), Expect = 9e-62
 Identities = 130/261 (49%), Positives = 168/261 (64%), Gaps = 4/261 (1%)
 Frame = -2

Query: 1050 METGASEETCARLETATNGEVVFVKGSWFPTHFTLFITDGLHAWITKASEKNVADRASQW 871
            ME+  +  TC +LE     E +F+KG+WFP HF L ITDGL++W   A+E+ V  RA+QW
Sbjct: 1    MESTMARHTCLKLEIP---EPIFIKGTWFPFHFNLSITDGLNSWFCNATEEEVRGRAAQW 57

Query: 870  DQSVSEYLEDARHYLGNQQPGSIYSFQDAGNDHMRLSWTLEKDGTKLECRWKCERATNDQ 691
            DQ VS Y++ A  +LG Q PGS+Y F DAG  + RLSWT EK+GTKLE RWKC+ + + +
Sbjct: 58   DQPVSTYIQLAEKHLGFQIPGSVYKFTDAGEGNKRLSWTFEKEGTKLEWRWKCQPSPDTK 117

Query: 690  KVTKSILDFLMEANTKLSDEVVRKTRSFERMKVEAEKCLVQSEKLKNEKTEFEHDVYAKF 511
            K T  ILDFLM+AN +LS+EVVRKT+SFER+K EAEKCL QSEK  ++K EFE  VYAKF
Sbjct: 118  KTTTLILDFLMDANIRLSEEVVRKTQSFERLKGEAEKCLAQSEKFNSQKMEFEAAVYAKF 177

Query: 510  VAVLNSKKAKLRELRE----KSVNLRQQEKAEDEDGEYSAEETDRXXXXXXXXXXXSKTS 343
            + VLNSKK KLRELR+    K ++    ++ ED D     E  DR               
Sbjct: 178  LGVLNSKKRKLRELRDQLSKKEISGESAQEGEDSD---KTESFDR--------------- 219

Query: 342  EDADTTRKISKSKPYLAGKSK 280
              +D  + + K +  LAG SK
Sbjct: 220  -GSDDEKSVEKPREKLAGTSK 239


>gb|EOY05931.1| DNA ligase iv-binding protein XRCC4 isoform 2 [Theobroma cacao]
          Length = 276

 Score =  243 bits (619), Expect = 1e-61
 Identities = 128/235 (54%), Positives = 160/235 (68%), Gaps = 18/235 (7%)
 Frame = -2

Query: 1050 METGASE---ETCARLETATNGEVVFVKGSWFPTHFTLFITDGLHAWITKASEKNVADRA 880
            MET +S     TC +LE  +  E +FVKG+WF  HF + ITDGLHAW+  A+E+ V +RA
Sbjct: 1    METSSSSTTRHTCLKLEIPST-EPIFVKGTWFDAHFDISITDGLHAWVCNATEEEVKERA 59

Query: 879  SQWDQSVSEYLEDARHYLGNQQPGSIYSFQDAGNDHMRLSWTLEKDGTKLECRWKCERAT 700
            +QWDQ V+EY+E A  YLG QQ GS+Y F DAG+DH RLSW  EK+GTKLE RWK   + 
Sbjct: 60   AQWDQPVTEYIELAERYLGFQQSGSVYRFADAGDDHKRLSWAFEKEGTKLEWRWKFRPSP 119

Query: 699  NDQKVTKSILDFLMEANTKLS-------------DEVVRKTRSFERMKVEAEKCLVQSEK 559
            + QK+T  ILDFLM+AN +LS             +EV RKT+SFE++KVEAEKCL QSE+
Sbjct: 120  DSQKITGGILDFLMDANIRLSHVCVCVCVCVCLQEEVFRKTQSFEKLKVEAEKCLEQSER 179

Query: 558  LKNEKTEFEHDVYAKFVAVLNSKKAKLRELREKSVNLRQQEKA--EDEDGEYSAE 400
              NEK EFE ++YAKF+ VLNSKKAKLRELR++        KA  E+ED     E
Sbjct: 180  STNEKMEFESEIYAKFLGVLNSKKAKLRELRDQLSKQETTGKALMEEEDSTDKTE 234


>ref|XP_004290386.1| PREDICTED: DNA repair protein XRCC4-like isoform 1 [Fragaria vesca
            subsp. vesca]
          Length = 259

 Score =  243 bits (619), Expect = 1e-61
 Identities = 123/215 (57%), Positives = 158/215 (73%), Gaps = 2/215 (0%)
 Frame = -2

Query: 1029 ETCARLETATNGEVVFVKGSWFPTHFTLFITDGLHAWITKASEKNVADRASQWDQSVSEY 850
            ++C +LE   + + +FVKG+WF + F L ITDGL+AW+  ASE  V DRA+QWDQ V +Y
Sbjct: 11   QSCLKLEPKES-QPIFVKGTWFHSRFDLSITDGLNAWVCHASEDAVRDRAAQWDQPVPDY 69

Query: 849  LEDARHYLGNQQPGSIYSFQDAGNDHMRLSWTLEKDGTKLECRWKCERATNDQKVTKSIL 670
            +  A  YLG Q P S+Y F DAG+ H RLSWT +K+GTKLE RWKCE + N ++ T ++L
Sbjct: 70   VSLAERYLGFQHPDSVYKFTDAGDGHKRLSWTFDKEGTKLEWRWKCEPSPNSKETTAAVL 129

Query: 669  DFLMEANTKLSDEVVRKTRSFERMKVEAEKCLVQSEKLKNEKTEFEHDVYAKFVAVLNSK 490
            DFLM+AN  LS+EVVRKT+SFER+KVEAE CL+QSE++ NEK EFE  VYAKF+ VLNSK
Sbjct: 130  DFLMDANVGLSEEVVRKTQSFERLKVEAEMCLIQSERIANEKIEFESAVYAKFLGVLNSK 189

Query: 489  KAKLRELREKSVNLRQQEKAE--DEDGEYSAEETD 391
            K KLRELR+K   L +QE A    E  E S ++T+
Sbjct: 190  KTKLRELRDK---LSKQEAAGKLPEQEEESTDKTE 221


>gb|EOY05932.1| DNA ligase iv-binding protein XRCC4 isoform 3 [Theobroma cacao]
          Length = 277

 Score =  242 bits (618), Expect = 2e-61
 Identities = 128/236 (54%), Positives = 160/236 (67%), Gaps = 19/236 (8%)
 Frame = -2

Query: 1050 METGASE---ETCARLETATNGEVVFVKGSWFPTHFTLFITDGLHAWITKASEKNVADRA 880
            MET +S     TC +LE  +  E +FVKG+WF  HF + ITDGLHAW+  A+E+ V +RA
Sbjct: 1    METSSSSTTRHTCLKLEIPST-EPIFVKGTWFDAHFDISITDGLHAWVCNATEEEVKERA 59

Query: 879  SQWDQSVSEYLEDARHYLGNQQPGSIYSFQDAGNDHMRLSWTLEKDGTKLECRWKCERAT 700
            +QWDQ V+EY+E A  YLG QQ GS+Y F DAG+DH RLSW  EK+GTKLE RWK   + 
Sbjct: 60   AQWDQPVTEYIELAERYLGFQQSGSVYRFADAGDDHKRLSWAFEKEGTKLEWRWKFRPSP 119

Query: 699  NDQKVTKSILDFLMEANTKLS--------------DEVVRKTRSFERMKVEAEKCLVQSE 562
            + QK+T  ILDFLM+AN +LS              +EV RKT+SFE++KVEAEKCL QSE
Sbjct: 120  DSQKITGGILDFLMDANIRLSKHVCVCVCVCVCLQEEVFRKTQSFEKLKVEAEKCLEQSE 179

Query: 561  KLKNEKTEFEHDVYAKFVAVLNSKKAKLRELREKSVNLRQQEKA--EDEDGEYSAE 400
            +  NEK EFE ++YAKF+ VLNSKKAKLRELR++        KA  E+ED     E
Sbjct: 180  RSTNEKMEFESEIYAKFLGVLNSKKAKLRELRDQLSKQETTGKALMEEEDSTDKTE 235


>ref|NP_188951.2| DNA repair protein XRCC4-like protein [Arabidopsis thaliana]
            gi|238479872|ref|NP_001154639.1| DNA repair protein
            XRCC4-like protein [Arabidopsis thaliana]
            gi|85701292|sp|Q682V0.2|XRCC4_ARATH RecName: Full=DNA
            repair protein XRCC4 gi|9800643|gb|AAF91285.2|AF233528_1
            putative double strand break repair protein [Arabidopsis
            thaliana] gi|9294200|dbj|BAB02102.1| unnamed protein
            product [Arabidopsis thaliana]
            gi|332643196|gb|AEE76717.1| DNA repair protein XRCC4-like
            protein [Arabidopsis thaliana]
            gi|332643197|gb|AEE76718.1| DNA repair protein XRCC4-like
            protein [Arabidopsis thaliana]
          Length = 264

 Score =  241 bits (616), Expect = 3e-61
 Identities = 121/217 (55%), Positives = 158/217 (72%)
 Frame = -2

Query: 1050 METGASEETCARLETATNGEVVFVKGSWFPTHFTLFITDGLHAWITKASEKNVADRASQW 871
            +E+  ++ TC RLE +   + +FVKG+W  + F + +TDG  +WI  A+E+ VA+RA+QW
Sbjct: 18   VESEKTKHTCLRLEIS-GADPIFVKGTWHNSRFDISVTDGSSSWICNATEEEVAERAAQW 76

Query: 870  DQSVSEYLEDARHYLGNQQPGSIYSFQDAGNDHMRLSWTLEKDGTKLECRWKCERATNDQ 691
            DQ VSEYL+ A  YLG QQP S+YSF DA     RLSWT EK+GTKLE RWKC+ + + +
Sbjct: 77   DQPVSEYLKLAEQYLGFQQPNSVYSFSDALEGSKRLSWTFEKEGTKLEWRWKCKPSDDSK 136

Query: 690  KVTKSILDFLMEANTKLSDEVVRKTRSFERMKVEAEKCLVQSEKLKNEKTEFEHDVYAKF 511
            K+T  ILDFLMEAN +LS+EVV KTRSFE+M+ EAE+CL Q EKL +EKTEFE   YAKF
Sbjct: 137  KITVGILDFLMEANIRLSEEVVNKTRSFEKMRSEAERCLAQGEKLCDEKTEFESATYAKF 196

Query: 510  VAVLNSKKAKLRELREKSVNLRQQEKAEDEDGEYSAE 400
            ++VLN+KKAKLR LR+K  ++R  E+ E  D   S E
Sbjct: 197  LSVLNAKKAKLRALRDKEDSVRVVEEEESTDKAESFE 233