BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra25_contig00025040
         (878 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ADE76199.1| unknown [Picea sitchensis]                             216   9e-54
ref|XP_006485880.1| PREDICTED: RNA pseudouridine synthase 5-like...   204   3e-50
ref|XP_006436267.1| hypothetical protein CICLE_v10033672mg [Citr...   204   3e-50
ref|XP_006485879.1| PREDICTED: RNA pseudouridine synthase 5-like...   200   7e-49
ref|XP_004143830.1| PREDICTED: RNA pseudourine synthase 5-like [...   195   2e-47
ref|XP_004157313.1| PREDICTED: RNA pseudourine synthase 5-like [...   195   2e-47
ref|XP_006403820.1| hypothetical protein EUTSA_v10010446mg [Eutr...   193   6e-47
ref|NP_974416.1| RNA pseudourine synthase 5 [Arabidopsis thalian...   192   1e-46
ref|XP_006346978.1| PREDICTED: RNA pseudouridine synthase 5-like...   192   1e-46
ref|XP_006346977.1| PREDICTED: RNA pseudouridine synthase 5-like...   192   1e-46
ref|XP_006346975.1| PREDICTED: RNA pseudouridine synthase 5-like...   192   1e-46
ref|XP_002312025.1| hypothetical protein POPTR_0008s04160g [Popu...   191   2e-46
ref|XP_004233537.1| PREDICTED: RNA pseudourine synthase 5-like [...   190   5e-46
ref|XP_006291291.1| hypothetical protein CARUB_v10017427mg [Caps...   190   7e-46
ref|XP_004307403.1| PREDICTED: RNA pseudourine synthase 5-like [...   189   9e-46
gb|EXB80105.1| RNA pseudourine synthase 5 [Morus notabilis]           189   2e-45
gb|EOY18594.1| Pseudouridine synthase family protein [Theobroma ...   187   4e-45
ref|XP_004496322.1| PREDICTED: RNA pseudourine synthase 5-like [...   187   4e-45
ref|XP_002877851.1| pseudouridine synthase family protein [Arabi...   187   6e-45
emb|CAC07917.1| putative protein [Arabidopsis thaliana]               186   1e-44

>gb|ADE76199.1| unknown [Picea sitchensis]
          Length = 386

 Score =  216 bits (550), Expect = 9e-54
 Identities = 103/169 (60%), Positives = 128/169 (75%)
 Frame = -1

Query: 872 KRQISKIYRALVQGIVDHNTIVINQPIGKIQYPGVACGLYVATPTGKQAESQVVVLYRDK 693
           KR+I K YRAL  GI++ N I I QPIGK++YPGV  GLYVA+PTGKQAES++ VL RDK
Sbjct: 203 KRRIYKTYRALADGIIEQNKIAIKQPIGKMRYPGVRSGLYVASPTGKQAESRITVLSRDK 262

Query: 692 KRNCTLVEVEIYSGRAHQIRIHMAYIGHPLAGDPLYVSGGKPLXXXXXXXXXXXXXXXXS 513
            RNCTLVEVEIYSGR HQIRIH+++IGHPL GDPLYV+GG+P                 +
Sbjct: 263 NRNCTLVEVEIYSGRPHQIRIHLSFIGHPLLGDPLYVAGGRP--SITVSDSYSESREGDN 320

Query: 512 FAEDGGYERSPYSMPGDCGYHLHAYQVILQHPISNKVMKIVAPPPTTLS 366
           FAEDGGY++    +PGDCGY+LHAY++   HP+S++V++IVAPPP  LS
Sbjct: 321 FAEDGGYQKPLNPVPGDCGYYLHAYRLAFHHPVSDEVVEIVAPPPPMLS 369


>ref|XP_006485880.1| PREDICTED: RNA pseudouridine synthase 5-like isoform X2 [Citrus
           sinensis] gi|568865018|ref|XP_006485881.1| PREDICTED:
           RNA pseudouridine synthase 5-like isoform X3 [Citrus
           sinensis]
          Length = 389

 Score =  204 bits (520), Expect = 3e-50
 Identities = 100/168 (59%), Positives = 127/168 (75%)
 Frame = -1

Query: 872 KRQISKIYRALVQGIVDHNTIVINQPIGKIQYPGVACGLYVATPTGKQAESQVVVLYRDK 693
           +R+I+KIYRALV GIVD + ++I QPIG ++YPGVA GLYVA+P+GK A S+V VL RD 
Sbjct: 202 QRKITKIYRALVHGIVDEDKVIIKQPIGIVRYPGVAKGLYVASPSGKPALSKVDVLERDV 261

Query: 692 KRNCTLVEVEIYSGRAHQIRIHMAYIGHPLAGDPLYVSGGKPLXXXXXXXXXXXXXXXXS 513
           +RNCTLV+VEI SGR HQIRIH+A++GHPL GDPLYV+GG+P                 +
Sbjct: 262 QRNCTLVQVEIQSGRPHQIRIHLAFLGHPLLGDPLYVAGGQP-------KSFDSEFADGT 314

Query: 512 FAEDGGYERSPYSMPGDCGYHLHAYQVILQHPISNKVMKIVAPPPTTL 369
           FA+DGGYER    +PGDCGY+LHAYQ+ L HP +N+V+KI AP P+ L
Sbjct: 315 FAQDGGYERPVNPVPGDCGYYLHAYQLFLSHPTTNEVIKITAPLPSVL 362


>ref|XP_006436267.1| hypothetical protein CICLE_v10033672mg [Citrus clementina]
           gi|557538463|gb|ESR49507.1| hypothetical protein
           CICLE_v10033672mg [Citrus clementina]
          Length = 312

 Score =  204 bits (520), Expect = 3e-50
 Identities = 100/168 (59%), Positives = 127/168 (75%)
 Frame = -1

Query: 872 KRQISKIYRALVQGIVDHNTIVINQPIGKIQYPGVACGLYVATPTGKQAESQVVVLYRDK 693
           +R+I+KIYRALV GIVD + ++I QPIG ++YPGVA GLYVA+P+GK A S+V VL RD 
Sbjct: 125 QRKITKIYRALVHGIVDEDKVIIKQPIGIVRYPGVAKGLYVASPSGKPALSKVDVLERDV 184

Query: 692 KRNCTLVEVEIYSGRAHQIRIHMAYIGHPLAGDPLYVSGGKPLXXXXXXXXXXXXXXXXS 513
           +RNCTLV+VEI SGR HQIRIH+A++GHPL GDPLYV+GG+P                 +
Sbjct: 185 QRNCTLVQVEIQSGRPHQIRIHLAFLGHPLLGDPLYVAGGQP-------KSFDSEFADGT 237

Query: 512 FAEDGGYERSPYSMPGDCGYHLHAYQVILQHPISNKVMKIVAPPPTTL 369
           FA+DGGYER    +PGDCGY+LHAYQ+ L HP +N+V+KI AP P+ L
Sbjct: 238 FAQDGGYERPVNPVPGDCGYYLHAYQLFLSHPTTNEVIKITAPLPSVL 285


>ref|XP_006485879.1| PREDICTED: RNA pseudouridine synthase 5-like isoform X1 [Citrus
           sinensis]
          Length = 390

 Score =  200 bits (508), Expect = 7e-49
 Identities = 100/169 (59%), Positives = 127/169 (75%), Gaps = 1/169 (0%)
 Frame = -1

Query: 872 KRQISKIYRALVQGIVDHNTIVINQPIGKIQYPGVACGLYVATPTGKQAESQVVVLYRDK 693
           +R+I+KIYRALV GIVD + ++I QPIG ++YPGVA GLYVA+P+GK A S+V VL RD 
Sbjct: 202 QRKITKIYRALVHGIVDEDKVIIKQPIGIVRYPGVAKGLYVASPSGKPALSKVDVLERDV 261

Query: 692 KRNCTLV-EVEIYSGRAHQIRIHMAYIGHPLAGDPLYVSGGKPLXXXXXXXXXXXXXXXX 516
           +RNCTLV +VEI SGR HQIRIH+A++GHPL GDPLYV+GG+P                 
Sbjct: 262 QRNCTLVQQVEIQSGRPHQIRIHLAFLGHPLLGDPLYVAGGQP-------KSFDSEFADG 314

Query: 515 SFAEDGGYERSPYSMPGDCGYHLHAYQVILQHPISNKVMKIVAPPPTTL 369
           +FA+DGGYER    +PGDCGY+LHAYQ+ L HP +N+V+KI AP P+ L
Sbjct: 315 TFAQDGGYERPVNPVPGDCGYYLHAYQLFLSHPTTNEVIKITAPLPSVL 363


>ref|XP_004143830.1| PREDICTED: RNA pseudourine synthase 5-like [Cucumis sativus]
          Length = 371

 Score =  195 bits (496), Expect = 2e-47
 Identities = 100/168 (59%), Positives = 125/168 (74%)
 Frame = -1

Query: 872 KRQISKIYRALVQGIVDHNTIVINQPIGKIQYPGVACGLYVATPTGKQAESQVVVLYRDK 693
           KR+ISKIYRALV GI+  + + ++QPIG++QYPGVA GLYVATP+GK A S+V VL RD+
Sbjct: 200 KRKISKIYRALVTGIIHDDEVSVDQPIGRMQYPGVAQGLYVATPSGKPACSKVNVLERDE 259

Query: 692 KRNCTLVEVEIYSGRAHQIRIHMAYIGHPLAGDPLYVSGGKPLXXXXXXXXXXXXXXXXS 513
           +   TLV+VEI SGR HQIRIH++ IGHPL GDPLYV+GG+P                 S
Sbjct: 260 QSKHTLVQVEIQSGRPHQIRIHLSSIGHPLVGDPLYVAGGQP-------NCLHSEVVNQS 312

Query: 512 FAEDGGYERSPYSMPGDCGYHLHAYQVILQHPISNKVMKIVAPPPTTL 369
           FAEDGGYER    +PGDCGY+LHA+Q+IL HP +N+V+KI+AP P  L
Sbjct: 313 FAEDGGYERPTKPVPGDCGYYLHAHQLILYHPKTNEVVKIIAPLPPIL 360


>ref|XP_004157313.1| PREDICTED: RNA pseudourine synthase 5-like [Cucumis sativus]
          Length = 371

 Score =  195 bits (495), Expect = 2e-47
 Identities = 100/168 (59%), Positives = 125/168 (74%)
 Frame = -1

Query: 872 KRQISKIYRALVQGIVDHNTIVINQPIGKIQYPGVACGLYVATPTGKQAESQVVVLYRDK 693
           KR+ISKIYRALV GI+  + + ++QPIG++QYPGVA GLYVATP+GK A S+V VL RD+
Sbjct: 200 KRKISKIYRALVTGIIHDDEVSVDQPIGRMQYPGVAQGLYVATPSGKPACSKVNVLERDE 259

Query: 692 KRNCTLVEVEIYSGRAHQIRIHMAYIGHPLAGDPLYVSGGKPLXXXXXXXXXXXXXXXXS 513
           +   TLV+VEI SGR HQIRIH++ IGHPL GDPLYV+GG+P                 S
Sbjct: 260 QSKHTLVQVEIQSGRPHQIRIHLSSIGHPLLGDPLYVAGGQP-------NCLHSEVVNQS 312

Query: 512 FAEDGGYERSPYSMPGDCGYHLHAYQVILQHPISNKVMKIVAPPPTTL 369
           FAEDGGYER    +PGDCGY+LHA+Q+IL HP +N+V+KI+AP P  L
Sbjct: 313 FAEDGGYERPTKPVPGDCGYYLHAHQLILYHPKTNEVVKIIAPLPPIL 360


>ref|XP_006403820.1| hypothetical protein EUTSA_v10010446mg [Eutrema salsugineum]
           gi|557104939|gb|ESQ45273.1| hypothetical protein
           EUTSA_v10010446mg [Eutrema salsugineum]
          Length = 382

 Score =  193 bits (491), Expect = 6e-47
 Identities = 100/168 (59%), Positives = 123/168 (73%), Gaps = 1/168 (0%)
 Frame = -1

Query: 869 RQISKIYRALVQGIVDHNTIVINQPIGKIQYPGVACGLYVATPTGKQAESQVVVLYRDKK 690
           R+ISKIYRAL  GIV+ + +VI QPIG ++YPGVA GLYVA+  GK A S+V VL R+ +
Sbjct: 205 RKISKIYRALADGIVEEDEVVIKQPIGVVRYPGVAKGLYVASSEGKPALSKVAVLERNMQ 264

Query: 689 RNCTLVEVEIYSGRAHQIRIHMAYIGHPLAGDPLYVSGGKPLXXXXXXXXXXXXXXXXSF 510
           RNCTLV+VEI SGR HQIRIH+AY+GHPL GDPLYV+GGKP                 +F
Sbjct: 265 RNCTLVKVEIQSGRPHQIRIHLAYMGHPLVGDPLYVAGGKP-------KCFDPDAVDSAF 317

Query: 509 AEDGGYERSPYSMPGDCGYHLHAYQVILQHPIS-NKVMKIVAPPPTTL 369
           AEDGGY R   ++PGDCGYHLHA+QV L + ++ NKV+K+VAP P  L
Sbjct: 318 AEDGGYRRPNQAVPGDCGYHLHAHQVELPNLLNLNKVVKVVAPLPPIL 365


>ref|NP_974416.1| RNA pseudourine synthase 5 [Arabidopsis thaliana]
           gi|229891781|sp|Q5M721.2|PUS5_ARATH RecName: Full=RNA
           pseudouridine synthase 5; AltName: Full=RNA
           pseudouridylate synthase 5; AltName: Full=RNA-uridine
           isomerase 5 gi|332645400|gb|AEE78921.1| RNA pseudourine
           synthase 5 [Arabidopsis thaliana]
          Length = 369

 Score =  192 bits (489), Expect = 1e-46
 Identities = 98/168 (58%), Positives = 125/168 (74%), Gaps = 1/168 (0%)
 Frame = -1

Query: 869 RQISKIYRALVQGIVDHNTIVINQPIGKIQYPGVACGLYVATPTGKQAESQVVVLYRDKK 690
           R++SKIYRAL  GIV+ + +VI QPIG ++YPGVA GLYVA+P GK A S+V VL RD++
Sbjct: 201 RKLSKIYRALADGIVEEDEVVIKQPIGVVRYPGVAQGLYVASPEGKPAFSKVFVLERDRE 260

Query: 689 RNCTLVEVEIYSGRAHQIRIHMAYIGHPLAGDPLYVSGGKPLXXXXXXXXXXXXXXXXSF 510
           +NC+LV+VEI SGR HQIRIH+AY+GHPL GDPLYV+GG+P                 +F
Sbjct: 261 KNCSLVKVEIQSGRPHQIRIHLAYMGHPLVGDPLYVAGGQP-----KCFDPDLVDDAAAF 315

Query: 509 AEDGGYERSPYSMPGDCGYHLHAYQVILQHPI-SNKVMKIVAPPPTTL 369
           AEDGGY R   ++PGDCGYHLHA+QV L + + ++KV+KIVAP P  L
Sbjct: 316 AEDGGYRRPNQAVPGDCGYHLHAHQVELPNLLNTHKVVKIVAPLPPIL 363


>ref|XP_006346978.1| PREDICTED: RNA pseudouridine synthase 5-like isoform X4 [Solanum
           tuberosum]
          Length = 349

 Score =  192 bits (488), Expect = 1e-46
 Identities = 97/167 (58%), Positives = 122/167 (73%)
 Frame = -1

Query: 869 RQISKIYRALVQGIVDHNTIVINQPIGKIQYPGVACGLYVATPTGKQAESQVVVLYRDKK 690
           R+I KIYRALV G++D + +VI QPIG I+YPGVA GLYVA+P+GK A S V VL RD +
Sbjct: 181 RKICKIYRALVSGVMDMDEVVIKQPIGTIKYPGVAKGLYVASPSGKPALSSVRVLERDSE 240

Query: 689 RNCTLVEVEIYSGRAHQIRIHMAYIGHPLAGDPLYVSGGKPLXXXXXXXXXXXXXXXXSF 510
            NCTLV+VEI SGR HQIRIH+++IG+PL GDPLYVSGG+P                 SF
Sbjct: 241 NNCTLVQVEIQSGRPHQIRIHLSFIGYPLIGDPLYVSGGQP-------KCFHPELMDESF 293

Query: 509 AEDGGYERSPYSMPGDCGYHLHAYQVILQHPISNKVMKIVAPPPTTL 369
            +DGGY+R    +PGDCGY+LHA+Q+ L HPI+N+++KI AP P  L
Sbjct: 294 EKDGGYQRPENPVPGDCGYNLHAHQIGLIHPITNELIKITAPLPAIL 340


>ref|XP_006346977.1| PREDICTED: RNA pseudouridine synthase 5-like isoform X3 [Solanum
           tuberosum]
          Length = 374

 Score =  192 bits (488), Expect = 1e-46
 Identities = 97/167 (58%), Positives = 122/167 (73%)
 Frame = -1

Query: 869 RQISKIYRALVQGIVDHNTIVINQPIGKIQYPGVACGLYVATPTGKQAESQVVVLYRDKK 690
           R+I KIYRALV G++D + +VI QPIG I+YPGVA GLYVA+P+GK A S V VL RD +
Sbjct: 206 RKICKIYRALVSGVMDMDEVVIKQPIGTIKYPGVAKGLYVASPSGKPALSSVRVLERDSE 265

Query: 689 RNCTLVEVEIYSGRAHQIRIHMAYIGHPLAGDPLYVSGGKPLXXXXXXXXXXXXXXXXSF 510
            NCTLV+VEI SGR HQIRIH+++IG+PL GDPLYVSGG+P                 SF
Sbjct: 266 NNCTLVQVEIQSGRPHQIRIHLSFIGYPLIGDPLYVSGGQP-------KCFHPELMDESF 318

Query: 509 AEDGGYERSPYSMPGDCGYHLHAYQVILQHPISNKVMKIVAPPPTTL 369
            +DGGY+R    +PGDCGY+LHA+Q+ L HPI+N+++KI AP P  L
Sbjct: 319 EKDGGYQRPENPVPGDCGYNLHAHQIGLIHPITNELIKITAPLPAIL 365


>ref|XP_006346975.1| PREDICTED: RNA pseudouridine synthase 5-like isoform X1 [Solanum
           tuberosum] gi|565360441|ref|XP_006346976.1| PREDICTED:
           RNA pseudouridine synthase 5-like isoform X2 [Solanum
           tuberosum]
          Length = 379

 Score =  192 bits (488), Expect = 1e-46
 Identities = 97/167 (58%), Positives = 122/167 (73%)
 Frame = -1

Query: 869 RQISKIYRALVQGIVDHNTIVINQPIGKIQYPGVACGLYVATPTGKQAESQVVVLYRDKK 690
           R+I KIYRALV G++D + +VI QPIG I+YPGVA GLYVA+P+GK A S V VL RD +
Sbjct: 211 RKICKIYRALVSGVMDMDEVVIKQPIGTIKYPGVAKGLYVASPSGKPALSSVRVLERDSE 270

Query: 689 RNCTLVEVEIYSGRAHQIRIHMAYIGHPLAGDPLYVSGGKPLXXXXXXXXXXXXXXXXSF 510
            NCTLV+VEI SGR HQIRIH+++IG+PL GDPLYVSGG+P                 SF
Sbjct: 271 NNCTLVQVEIQSGRPHQIRIHLSFIGYPLIGDPLYVSGGQP-------KCFHPELMDESF 323

Query: 509 AEDGGYERSPYSMPGDCGYHLHAYQVILQHPISNKVMKIVAPPPTTL 369
            +DGGY+R    +PGDCGY+LHA+Q+ L HPI+N+++KI AP P  L
Sbjct: 324 EKDGGYQRPENPVPGDCGYNLHAHQIGLIHPITNELIKITAPLPAIL 370


>ref|XP_002312025.1| hypothetical protein POPTR_0008s04160g [Populus trichocarpa]
           gi|222851845|gb|EEE89392.1| hypothetical protein
           POPTR_0008s04160g [Populus trichocarpa]
          Length = 377

 Score =  191 bits (486), Expect = 2e-46
 Identities = 99/171 (57%), Positives = 126/171 (73%), Gaps = 1/171 (0%)
 Frame = -1

Query: 878 TKKRQISKIYRALVQGIVDHNTIVINQPIGKIQYPGVACGLYVATPTGKQAESQVVVLYR 699
           +K+R+ISKIYRALV GI++ + I+I QPIG ++YPGVA GLYVA+P+GK A S+V VL R
Sbjct: 204 SKRRKISKIYRALVNGILNQDKIIIKQPIGTMRYPGVAKGLYVASPSGKPALSKVEVLER 263

Query: 698 DKKRNCTLVEVEIYSGRAHQIRIHMAYIGHPLAGDPLYVSGGKPLXXXXXXXXXXXXXXX 519
           D + N TLV+VEI SGR HQIRIH+++IGHPL GDPLY  GG+P+               
Sbjct: 264 DSQLNQTLVQVEIESGRPHQIRIHLSFIGHPLLGDPLYDVGGQPM-------CFDSEHED 316

Query: 518 XSFAEDGGYERSPYSMPGDCGYHLHAYQVILQHPISN-KVMKIVAPPPTTL 369
            SFAEDGGYER    +PGDCGY+LHA+Q++L HP  N +V+KI AP P+ L
Sbjct: 317 ESFAEDGGYERPAKPVPGDCGYYLHAHQLVLSHPTKNEQVIKITAPLPSIL 367


>ref|XP_004233537.1| PREDICTED: RNA pseudourine synthase 5-like [Solanum lycopersicum]
          Length = 402

 Score =  190 bits (483), Expect = 5e-46
 Identities = 97/167 (58%), Positives = 121/167 (72%)
 Frame = -1

Query: 869 RQISKIYRALVQGIVDHNTIVINQPIGKIQYPGVACGLYVATPTGKQAESQVVVLYRDKK 690
           R+I KIYRALV G++D +  VI QPIG I+YPGVA GLYVA+P+GK A S V VL RD +
Sbjct: 229 RKICKIYRALVSGVMDMDEAVIKQPIGTIKYPGVAKGLYVASPSGKPALSSVRVLERDSE 288

Query: 689 RNCTLVEVEIYSGRAHQIRIHMAYIGHPLAGDPLYVSGGKPLXXXXXXXXXXXXXXXXSF 510
            NCTLV+VEI SGR HQIRIH+++IG+PL GDPLYVSGG+P                 SF
Sbjct: 289 SNCTLVQVEIQSGRPHQIRIHLSFIGYPLIGDPLYVSGGQP-------KCFHPELLDESF 341

Query: 509 AEDGGYERSPYSMPGDCGYHLHAYQVILQHPISNKVMKIVAPPPTTL 369
            +DGGY+R    +PGDCGY+LHA+Q+ L HPI+N+++KI AP P  L
Sbjct: 342 EKDGGYQRPENPVPGDCGYNLHAHQIGLIHPITNELIKITAPLPAIL 388


>ref|XP_006291291.1| hypothetical protein CARUB_v10017427mg [Capsella rubella]
           gi|482559998|gb|EOA24189.1| hypothetical protein
           CARUB_v10017427mg [Capsella rubella]
          Length = 382

 Score =  190 bits (482), Expect = 7e-46
 Identities = 98/168 (58%), Positives = 125/168 (74%), Gaps = 1/168 (0%)
 Frame = -1

Query: 869 RQISKIYRALVQGIVDHNTIVINQPIGKIQYPGVACGLYVATPTGKQAESQVVVLYRDKK 690
           R++SKIYRAL  GIV+ + +VI QPIG ++YPGVA GLYVA+P GK A S+VVVL RD++
Sbjct: 203 RKLSKIYRALADGIVEEDEVVIQQPIGVVRYPGVAKGLYVASPEGKPAFSKVVVLERDRE 262

Query: 689 RNCTLVEVEIYSGRAHQIRIHMAYIGHPLAGDPLYVSGGKPLXXXXXXXXXXXXXXXXSF 510
           ++CTLV+VEI SGR HQIRIH+AYIGHPL GDPLYV+GG+P                 +F
Sbjct: 263 KSCTLVKVEIQSGRPHQIRIHLAYIGHPLIGDPLYVAGGQP-----KCFDTDLVADDAAF 317

Query: 509 AEDGGYERSPYSMPGDCGYHLHAYQVILQHPI-SNKVMKIVAPPPTTL 369
           AEDGGY R    +PGDCGY+LHA+QV L + + +++V+KIVAP P  L
Sbjct: 318 AEDGGYRRPNQPVPGDCGYYLHAHQVDLLNLLNTHQVVKIVAPLPPIL 365


>ref|XP_004307403.1| PREDICTED: RNA pseudourine synthase 5-like [Fragaria vesca subsp.
           vesca]
          Length = 375

 Score =  189 bits (481), Expect = 9e-46
 Identities = 93/167 (55%), Positives = 123/167 (73%)
 Frame = -1

Query: 869 RQISKIYRALVQGIVDHNTIVINQPIGKIQYPGVACGLYVATPTGKQAESQVVVLYRDKK 690
           R+I+KIYRALV GI+  + +++ QPIG ++YPGVA GLY+A+P GK A S+V VL RD +
Sbjct: 205 RKITKIYRALVTGIICEDEVIVKQPIGTVRYPGVAKGLYIASPAGKPALSKVEVLDRDIQ 264

Query: 689 RNCTLVEVEIYSGRAHQIRIHMAYIGHPLAGDPLYVSGGKPLXXXXXXXXXXXXXXXXSF 510
           +N T+V+VEI SGR HQIRIH+++IGHPL GDPLYV+GG+P                 SF
Sbjct: 265 KNHTIVQVEIQSGRPHQIRIHLSFIGHPLLGDPLYVAGGQP-------KCLGSDLVDESF 317

Query: 509 AEDGGYERSPYSMPGDCGYHLHAYQVILQHPISNKVMKIVAPPPTTL 369
           A+DGG++R    +PGDCGY+LHA+QV+L HP SN+V+KI AP P  L
Sbjct: 318 ADDGGFKRPTKPVPGDCGYNLHAHQVVLSHPSSNEVIKITAPLPLVL 364


>gb|EXB80105.1| RNA pseudourine synthase 5 [Morus notabilis]
          Length = 377

 Score =  189 bits (479), Expect = 2e-45
 Identities = 95/168 (56%), Positives = 120/168 (71%)
 Frame = -1

Query: 872 KRQISKIYRALVQGIVDHNTIVINQPIGKIQYPGVACGLYVATPTGKQAESQVVVLYRDK 693
           +R+I KIYRALV GIV  + +++ QPIG +QYPGVA GLYVA+P+GK A S+V VL RD 
Sbjct: 205 RRKILKIYRALVTGIVCEDKVIVEQPIGTVQYPGVAKGLYVASPSGKPALSKVEVLERDV 264

Query: 692 KRNCTLVEVEIYSGRAHQIRIHMAYIGHPLAGDPLYVSGGKPLXXXXXXXXXXXXXXXXS 513
           ++NCTLV+VEI SGR HQIRIH+++IGHPL GDPLYV GG+P                 S
Sbjct: 265 EKNCTLVKVEIQSGRPHQIRIHLSFIGHPLLGDPLYVVGGRP-------RCFDPEFVDGS 317

Query: 512 FAEDGGYERSPYSMPGDCGYHLHAYQVILQHPISNKVMKIVAPPPTTL 369
           FA+DGG+ R    +PGDCGY LHA+ V L HP +N+V++I AP P  L
Sbjct: 318 FAQDGGFPRPAKPVPGDCGYTLHAHHVSLSHPTTNEVIEITAPLPPVL 365


>gb|EOY18594.1| Pseudouridine synthase family protein [Theobroma cacao]
          Length = 378

 Score =  187 bits (475), Expect = 4e-45
 Identities = 90/167 (53%), Positives = 125/167 (74%)
 Frame = -1

Query: 869 RQISKIYRALVQGIVDHNTIVINQPIGKIQYPGVACGLYVATPTGKQAESQVVVLYRDKK 690
           R+ISKIYRALV GI+  + +VINQPIG +QYPGVA GLYVA+P+GK A S+V VL +D++
Sbjct: 204 RKISKIYRALVTGILGEDKVVINQPIGIVQYPGVAKGLYVASPSGKPALSKVEVLEKDEQ 263

Query: 689 RNCTLVEVEIYSGRAHQIRIHMAYIGHPLAGDPLYVSGGKPLXXXXXXXXXXXXXXXXSF 510
           +N TLV+V+I SGR HQIRIH+++IGHPL GDPLY++GG+P                 ++
Sbjct: 264 QNHTLVQVQIESGRPHQIRIHLSFIGHPLLGDPLYIAGGQP-------RCFDSEFVDENY 316

Query: 509 AEDGGYERSPYSMPGDCGYHLHAYQVILQHPISNKVMKIVAPPPTTL 369
           A+DGGY+R    +PGDCGY+LHA++++L HP +++++ I AP P  L
Sbjct: 317 AQDGGYQRPVNPVPGDCGYYLHAHRLLLSHPTTDEIINITAPLPPVL 363


>ref|XP_004496322.1| PREDICTED: RNA pseudourine synthase 5-like [Cicer arietinum]
          Length = 368

 Score =  187 bits (475), Expect = 4e-45
 Identities = 91/166 (54%), Positives = 123/166 (74%)
 Frame = -1

Query: 866 QISKIYRALVQGIVDHNTIVINQPIGKIQYPGVACGLYVATPTGKQAESQVVVLYRDKKR 687
           +I+KIYRALV GI+D++ + I+QPIG ++YPGVA GLYVA+ +GK A S V +L R+ K 
Sbjct: 197 KIAKIYRALVSGIIDNDKVTIDQPIGMVKYPGVAKGLYVASQSGKPALSVVDILERNVKE 256

Query: 686 NCTLVEVEIYSGRAHQIRIHMAYIGHPLAGDPLYVSGGKPLXXXXXXXXXXXXXXXXSFA 507
           N TLV+V+I SGR HQIRIH+++IGHPL GDPLY  GG+P                 SFA
Sbjct: 257 NSTLVQVKIQSGRPHQIRIHLSFIGHPLIGDPLYAVGGQP-------KCLDYDFLDDSFA 309

Query: 506 EDGGYERSPYSMPGDCGYHLHAYQVILQHPISNKVMKIVAPPPTTL 369
           EDGGY R P  +PGDCGY+LHA++++L HPI+N++++I+AP P+ L
Sbjct: 310 EDGGYPRPPKPVPGDCGYYLHAHELLLTHPITNEIIEIIAPLPSIL 355


>ref|XP_002877851.1| pseudouridine synthase family protein [Arabidopsis lyrata subsp.
           lyrata] gi|297323689|gb|EFH54110.1| pseudouridine
           synthase family protein [Arabidopsis lyrata subsp.
           lyrata]
          Length = 387

 Score =  187 bits (474), Expect = 6e-45
 Identities = 99/176 (56%), Positives = 125/176 (71%), Gaps = 7/176 (3%)
 Frame = -1

Query: 875 KKRQISKIYRALVQGIVDHNTIVINQPIGKIQYPGVACGLYVATPTGKQAESQVVVLYRD 696
           K R++SKIYRAL  GIV+ + +VI QP+G ++YPGVA GLYVA+P GK A S+V VL RD
Sbjct: 202 KGRKLSKIYRALADGIVEEDEVVIKQPLGVVRYPGVAKGLYVASPEGKPAFSKVAVLERD 261

Query: 695 KKRNCTLVEVEIYSGRAHQIRIHMAYIGHPLAG------DPLYVSGGKPLXXXXXXXXXX 534
           K++NCTLV+VEI SGR HQIRIH+AY+GHPL        DPLYV+GG+P           
Sbjct: 262 KQKNCTLVKVEIQSGRPHQIRIHLAYMGHPLLASYNCMRDPLYVAGGQP-----KCFDPD 316

Query: 533 XXXXXXSFAEDGGYERSPYSMPGDCGYHLHAYQVILQHPI-SNKVMKIVAPPPTTL 369
                 +FAEDGGY R   ++PGDCGYHLHA+QV L + + ++KV+KIVAP P  L
Sbjct: 317 LVDDDAAFAEDGGYRRPNQAVPGDCGYHLHAHQVELPNLLNTHKVVKIVAPLPPIL 372


>emb|CAC07917.1| putative protein [Arabidopsis thaliana]
          Length = 376

 Score =  186 bits (471), Expect = 1e-44
 Identities = 98/175 (56%), Positives = 125/175 (71%), Gaps = 8/175 (4%)
 Frame = -1

Query: 869 RQISKIYRALVQGIVDHNT-------IVINQPIGKIQYPGVACGLYVATPTGKQAESQVV 711
           R++SKIYRAL  GIV+ +        +VI QPIG ++YPGVA GLYVA+P GK A S+V 
Sbjct: 201 RKLSKIYRALADGIVEEDEARPFLLFVVIKQPIGVVRYPGVAQGLYVASPEGKPAFSKVF 260

Query: 710 VLYRDKKRNCTLVEVEIYSGRAHQIRIHMAYIGHPLAGDPLYVSGGKPLXXXXXXXXXXX 531
           VL RD+++NC+LV+VEI SGR HQIRIH+AY+GHPL GDPLYV+GG+P            
Sbjct: 261 VLERDREKNCSLVKVEIQSGRPHQIRIHLAYMGHPLVGDPLYVAGGQP-----KCFDPDL 315

Query: 530 XXXXXSFAEDGGYERSPYSMPGDCGYHLHAYQVILQHPI-SNKVMKIVAPPPTTL 369
                +FAEDGGY R   ++PGDCGYHLHA+QV L + + ++KV+KIVAP P  L
Sbjct: 316 VDDAAAFAEDGGYRRPNQAVPGDCGYHLHAHQVELPNLLNTHKVVKIVAPLPPIL 370