BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra25_contig00024915
         (440 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006658490.1| PREDICTED: pentatricopeptide repeat-containi...   153   3e-35
ref|XP_002454923.1| hypothetical protein SORBIDRAFT_03g001460 [S...   152   6e-35
ref|XP_006359230.1| PREDICTED: pentatricopeptide repeat-containi...   151   8e-35
emb|CBI33742.3| unnamed protein product [Vitis vinifera]              151   8e-35
ref|XP_002279137.1| PREDICTED: pentatricopeptide repeat-containi...   151   8e-35
ref|XP_006847060.1| hypothetical protein AMTR_s00017p00201310 [A...   149   3e-34
ref|XP_002461865.1| hypothetical protein SORBIDRAFT_02g009560 [S...   149   3e-34
ref|XP_006292165.1| hypothetical protein CARUB_v10018371mg, part...   149   5e-34
tpg|DAA39404.1| TPA: hypothetical protein ZEAMMB73_882385 [Zea m...   149   5e-34
ref|NP_193141.2| pentatricopeptide repeat-containing protein [Ar...   148   6e-34
ref|NP_001059421.1| Os07g0299800 [Oryza sativa Japonica Group] g...   148   6e-34
gb|EAZ25232.1| hypothetical protein OsJ_09035 [Oryza sativa Japo...   148   6e-34
gb|EEE68333.1| hypothetical protein OsJ_26615 [Oryza sativa Japo...   148   8e-34
emb|CAN77232.1| hypothetical protein VITISV_001089 [Vitis vinifera]   148   8e-34
gb|EAZ03563.1| hypothetical protein OsI_25699 [Oryza sativa Indi...   148   8e-34
ref|NP_001061372.1| Os08g0249600 [Oryza sativa Japonica Group] g...   148   8e-34
ref|XP_006283355.1| hypothetical protein CARUB_v10004398mg [Caps...   147   1e-33
gb|EEC83198.1| hypothetical protein OsI_28453 [Oryza sativa Indi...   147   1e-33
ref|XP_004956000.1| PREDICTED: pentatricopeptide repeat-containi...   147   2e-33
gb|EOY09977.1| Pentatricopeptide repeat superfamily protein, put...   147   2e-33

>ref|XP_006658490.1| PREDICTED: pentatricopeptide repeat-containing protein At3g26782,
           mitochondrial-like, partial [Oryza brachyantha]
          Length = 576

 Score =  153 bits (386), Expect = 3e-35
 Identities = 69/145 (47%), Positives = 103/145 (71%)
 Frame = -3

Query: 438 VLSSVLKACAFMAALKQGKQVHGQVIIRGVEGYVFVGSALVDMYSKCGDMDDSVLAFRVL 259
           VLS+VL ACA    ++ GK+VH QV+  G+E  V+VG++LVDMYSKCG ++ +  AFR +
Sbjct: 206 VLSAVLLACAHAGTIQTGKRVHNQVVRMGLEENVYVGTSLVDMYSKCGRVEMANKAFRKI 265

Query: 258 DDRNVVSWNSLLVGYAHHGQGEKVMEVFSDMMKKGVSPNGITFVGVLFACVHMGNVELGT 79
            ++N++SW++++ GY  HG G++ +EVF++M + G+ PN ITF+ VL AC H G ++ G 
Sbjct: 266 KEKNILSWSAMITGYGMHGHGQEALEVFAEMKRSGLRPNYITFISVLAACSHAGLLDEGR 325

Query: 78  RMFEAMKTNYGIVPKKDHYGCMVRL 4
             + AMK  +GI P  +HYGCMV L
Sbjct: 326 HWYSAMKQEFGIEPGVEHYGCMVDL 350



 Score = 59.7 bits (143), Expect = 4e-07
 Identities = 34/106 (32%), Positives = 58/106 (54%), Gaps = 4/106 (3%)
 Frame = -3

Query: 378 VHGQVIIRGVEGYVFVGSALVDMYSKCGDMDDSVLAFRVLD--DRNVVSWNSLLVGYAHH 205
           +H  +   G+E    V + ++D Y+K G   D   A +V D  +R+VVSWNS++  YA +
Sbjct: 122 LHALIAKIGLERNAGVVNTMLDSYAK-GGHHDLEAARKVFDTMERDVVSWNSMIALYAQN 180

Query: 204 GQGEKVMEVFSDMMK--KGVSPNGITFVGVLFACVHMGNVELGTRM 73
           G   + + ++S+M+    G+  N +    VL AC H G ++ G R+
Sbjct: 181 GMSAEAIGLYSEMLNVGGGIRCNAVVLSAVLLACAHAGTIQTGKRV 226


>ref|XP_002454923.1| hypothetical protein SORBIDRAFT_03g001460 [Sorghum bicolor]
           gi|241926898|gb|EES00043.1| hypothetical protein
           SORBIDRAFT_03g001460 [Sorghum bicolor]
          Length = 741

 Score =  152 bits (383), Expect = 6e-35
 Identities = 67/142 (47%), Positives = 104/142 (73%)
 Frame = -3

Query: 435 LSSVLKACAFMAALKQGKQVHGQVIIRGVEGYVFVGSALVDMYSKCGDMDDSVLAFRVLD 256
           ++SVL+ACA +AAL+ GKQ+H Q++  G      VG+AL  MYSKCG+++DS++ FR + 
Sbjct: 431 VTSVLRACACLAALEPGKQLHAQILKCGFGLGGSVGTALSTMYSKCGNLEDSMVVFRRMP 490

Query: 255 DRNVVSWNSLLVGYAHHGQGEKVMEVFSDMMKKGVSPNGITFVGVLFACVHMGNVELGTR 76
           DR+++SWNS++ G++ HG+G   +++F +M  +G++P+ ITF+ VL AC HMG V+ G  
Sbjct: 491 DRDIISWNSIISGFSQHGRGRDALDLFEEMKLEGIAPDHITFINVLCACSHMGLVDRGWF 550

Query: 75  MFEAMKTNYGIVPKKDHYGCMV 10
            F AM  +YG++PK DHY C+V
Sbjct: 551 YFRAMSKDYGLIPKLDHYACIV 572



 Score = 88.2 bits (217), Expect = 1e-15
 Identities = 49/130 (37%), Positives = 78/130 (60%), Gaps = 2/130 (1%)
 Frame = -3

Query: 426 VLKACAFMAALKQGKQVHGQVIIRGVEGYVFVGSALVDMYSKCGDMDDSVLAFRVL-DDR 250
           +L A + M AL  GKQ HG ++  G E  V+V SALVDMY+KCG   D+   F  L D  
Sbjct: 332 ILNASSDMGALVVGKQAHGLMVKLGFERQVYVKSALVDMYAKCGCTGDAKDGFHQLYDVD 391

Query: 249 NVVSWNSLLVGYAHHGQGEKVMEVFSDMMKKGVSPNGITFVGVLFACVHMGNVELGTRMF 70
           +VV W +++ G+  +G+ E+ + ++S M K+GV P+ +T   VL AC  +  +E G ++ 
Sbjct: 392 DVVIWTAMITGHVQNGEHEEALMLYSRMDKEGVMPSYLTVTSVLRACACLAALEPGKQLH 451

Query: 69  -EAMKTNYGI 43
            + +K  +G+
Sbjct: 452 AQILKCGFGL 461



 Score = 81.6 bits (200), Expect = 1e-13
 Identities = 43/119 (36%), Positives = 69/119 (57%)
 Frame = -3

Query: 438 VLSSVLKACAFMAALKQGKQVHGQVIIRGVEGYVFVGSALVDMYSKCGDMDDSVLAFRVL 259
           V ++VL A +    L  G Q+HG V+  G+ G+V V ++LV MY+K   MD ++  F   
Sbjct: 227 VATAVLSAVSVPLGLLIGVQLHGLVLKDGLVGFVSVENSLVTMYAKAECMDAAMAVFGSS 286

Query: 258 DDRNVVSWNSLLVGYAHHGQGEKVMEVFSDMMKKGVSPNGITFVGVLFACVHMGNVELG 82
            +RN ++W++++ GYA +G+ +    +F  M   G SP   TFVG+L A   MG + +G
Sbjct: 287 KERNSITWSAMITGYAQNGEADCAATMFLQMHSAGFSPTEFTFVGILNASSDMGALVVG 345


>ref|XP_006359230.1| PREDICTED: pentatricopeptide repeat-containing protein At4g16835,
           mitochondrial-like [Solanum tuberosum]
          Length = 680

 Score =  151 bits (382), Expect = 8e-35
 Identities = 71/144 (49%), Positives = 101/144 (70%)
 Frame = -3

Query: 435 LSSVLKACAFMAALKQGKQVHGQVIIRGVEGYVFVGSALVDMYSKCGDMDDSVLAFRVLD 256
           LSS+L  C+ ++ALK GKQVH  V+   +   + VG++L+ MYSKCG ++D+   FR + 
Sbjct: 311 LSSLLLGCSNLSALKLGKQVHQHVVKSPLYVDMTVGTSLISMYSKCGVLEDAWKLFREMP 370

Query: 255 DRNVVSWNSLLVGYAHHGQGEKVMEVFSDMMKKGVSPNGITFVGVLFACVHMGNVELGTR 76
            ++VV+WN+++ GYA HG+ EK + +F +M +KG+ P+ ITFVGVL AC H G V LG +
Sbjct: 371 RKDVVTWNAMISGYAQHGESEKALNLFDEMRRKGIKPDWITFVGVLSACNHAGLVNLGIQ 430

Query: 75  MFEAMKTNYGIVPKKDHYGCMVRL 4
            FE M+ NYG+ PK DHY CMV L
Sbjct: 431 YFEQMQNNYGVKPKPDHYTCMVDL 454



 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 28/90 (31%), Positives = 51/90 (56%)
 Frame = -3

Query: 327 SALVDMYSKCGDMDDSVLAFRVLDDRNVVSWNSLLVGYAHHGQGEKVMEVFSDMMKKGVS 148
           + ++  +S+ G M ++   FRV+  RN V+WN+++ GY   G+ E  +E+F +   KGV 
Sbjct: 184 NTMISGFSQNGLMGEAEELFRVMPVRNEVTWNAMVAGYVESGELESALELFKEAPVKGV- 242

Query: 147 PNGITFVGVLFACVHMGNVELGTRMFEAMK 58
              I    ++   +  GNVE+  +MF+ M+
Sbjct: 243 ---IAKTAIVTGYMRSGNVEMAEKMFQEME 269



 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 23/91 (25%), Positives = 54/91 (59%)
 Frame = -3

Query: 339 VFVGSALVDMYSKCGDMDDSVLAFRVLDDRNVVSWNSLLVGYAHHGQGEKVMEVFSDMMK 160
           V   +A+V  Y + G+++ +   F+ ++++++V+WN+++ GY  +G+ E  M++   MM 
Sbjct: 242 VIAKTAIVTGYMRSGNVEMAEKMFQEMEEKSMVTWNTMISGYIENGRAEDGMKLVKKMMG 301

Query: 159 KGVSPNGITFVGVLFACVHMGNVELGTRMFE 67
            G+  N  T   +L  C ++  ++LG ++ +
Sbjct: 302 LGIKVNDSTLSSLLLGCSNLSALKLGKQVHQ 332


>emb|CBI33742.3| unnamed protein product [Vitis vinifera]
          Length = 562

 Score =  151 bits (382), Expect = 8e-35
 Identities = 70/142 (49%), Positives = 97/142 (68%)
 Frame = -3

Query: 429 SVLKACAFMAALKQGKQVHGQVIIRGVEGYVFVGSALVDMYSKCGDMDDSVLAFRVLDDR 250
           SVL AC  + AL+ G+ VH  +   G++  V VG+ALVDMYSKCG ++D+ L F  +DD+
Sbjct: 195 SVLSACGQLGALESGRWVHSYIENNGIQFNVHVGTALVDMYSKCGSLEDARLVFDKIDDK 254

Query: 249 NVVSWNSLLVGYAHHGQGEKVMEVFSDMMKKGVSPNGITFVGVLFACVHMGNVELGTRMF 70
           +VV+WNS++VGYA HG  ++ +++F  M + G+ P  ITF+G+L AC H G V  G  +F
Sbjct: 255 DVVAWNSMIVGYAMHGFSQEALQLFKSMCRMGLHPTNITFIGILSACGHSGWVTEGWDIF 314

Query: 69  EAMKTNYGIVPKKDHYGCMVRL 4
             MK  YGI PK +HYGCMV L
Sbjct: 315 NKMKDEYGIEPKIEHYGCMVNL 336



 Score = 59.3 bits (142), Expect = 5e-07
 Identities = 27/92 (29%), Positives = 53/92 (57%)
 Frame = -3

Query: 327 SALVDMYSKCGDMDDSVLAFRVLDDRNVVSWNSLLVGYAHHGQGEKVMEVFSDMMKKGVS 148
           +A++  Y+K G++D + + F  +++R+ V WN ++ GY  +G   + + +F  M+K    
Sbjct: 128 TAMLTCYAKHGELDAARVLFDGMEERDGVCWNVMIDGYTQNGMPNEALVLFRRMLKAKAK 187

Query: 147 PNGITFVGVLFACVHMGNVELGTRMFEAMKTN 52
           PN +T + VL AC  +G +E G  +   ++ N
Sbjct: 188 PNEVTVLSVLSACGQLGALESGRWVHSYIENN 219


>ref|XP_002279137.1| PREDICTED: pentatricopeptide repeat-containing protein At4g37380,
           chloroplastic-like [Vitis vinifera]
          Length = 628

 Score =  151 bits (382), Expect = 8e-35
 Identities = 70/142 (49%), Positives = 97/142 (68%)
 Frame = -3

Query: 429 SVLKACAFMAALKQGKQVHGQVIIRGVEGYVFVGSALVDMYSKCGDMDDSVLAFRVLDDR 250
           SVL AC  + AL+ G+ VH  +   G++  V VG+ALVDMYSKCG ++D+ L F  +DD+
Sbjct: 261 SVLSACGQLGALESGRWVHSYIENNGIQFNVHVGTALVDMYSKCGSLEDARLVFDKIDDK 320

Query: 249 NVVSWNSLLVGYAHHGQGEKVMEVFSDMMKKGVSPNGITFVGVLFACVHMGNVELGTRMF 70
           +VV+WNS++VGYA HG  ++ +++F  M + G+ P  ITF+G+L AC H G V  G  +F
Sbjct: 321 DVVAWNSMIVGYAMHGFSQEALQLFKSMCRMGLHPTNITFIGILSACGHSGWVTEGWDIF 380

Query: 69  EAMKTNYGIVPKKDHYGCMVRL 4
             MK  YGI PK +HYGCMV L
Sbjct: 381 NKMKDEYGIEPKIEHYGCMVNL 402



 Score = 63.9 bits (154), Expect = 2e-08
 Identities = 39/158 (24%), Positives = 73/158 (46%), Gaps = 31/158 (19%)
 Frame = -3

Query: 432 SSVLKACAFMAALKQGKQVHGQVIIRGVEGYVFVGSALVDMYSKCGD------------- 292
           SS+LK C     ++ GK +H Q +  G +  ++V + L+D+Y++ GD             
Sbjct: 132 SSILKLCP----IEPGKALHSQAVKLGFDSDLYVRTGLLDVYARGGDVVSAQQLFDTMPE 187

Query: 291 ------------------MDDSVLAFRVLDDRNVVSWNSLLVGYAHHGQGEKVMEVFSDM 166
                             +D + + F  +++R+ V WN ++ GY  +G   + + +F  M
Sbjct: 188 KSLVSLTAMLTCYAKHGELDAARVLFDGMEERDGVCWNVMIDGYTQNGMPNEALVLFRRM 247

Query: 165 MKKGVSPNGITFVGVLFACVHMGNVELGTRMFEAMKTN 52
           +K    PN +T + VL AC  +G +E G  +   ++ N
Sbjct: 248 LKAKAKPNEVTVLSVLSACGQLGALESGRWVHSYIENN 285


>ref|XP_006847060.1| hypothetical protein AMTR_s00017p00201310 [Amborella trichopoda]
           gi|548850089|gb|ERN08641.1| hypothetical protein
           AMTR_s00017p00201310 [Amborella trichopoda]
          Length = 591

 Score =  149 bits (377), Expect = 3e-34
 Identities = 65/145 (44%), Positives = 102/145 (70%)
 Frame = -3

Query: 438 VLSSVLKACAFMAALKQGKQVHGQVIIRGVEGYVFVGSALVDMYSKCGDMDDSVLAFRVL 259
           VLSS+LKAC+ ++AL  GKQ+H  ++ RG E  V   +ALVDMYSKCG++++ +  F  L
Sbjct: 349 VLSSILKACSTLSALASGKQIHAVIVKRGYETEVITSTALVDMYSKCGEIEEGIAVFDGL 408

Query: 258 DDRNVVSWNSLLVGYAHHGQGEKVMEVFSDMMKKGVSPNGITFVGVLFACVHMGNVELGT 79
            DR++VSW  ++VG A +G+ ++ +  F +M++ GV+PN +TFVG+L AC H G ++   
Sbjct: 409 RDRDIVSWTGIIVGCARNGRAKEAIGYFGEMLRYGVNPNEVTFVGILSACSHAGLIDDAC 468

Query: 78  RMFEAMKTNYGIVPKKDHYGCMVRL 4
           R FE+M  ++G++P  +HY CM+ L
Sbjct: 469 RYFESMSHDHGVIPGIEHYSCMIDL 493



 Score = 74.7 bits (182), Expect = 1e-11
 Identities = 36/119 (30%), Positives = 67/119 (56%)
 Frame = -3

Query: 429 SVLKACAFMAALKQGKQVHGQVIIRGVEGYVFVGSALVDMYSKCGDMDDSVLAFRVLDDR 250
           ++LK       ++ G QVHG V+  G      +GS+LVD+Y+KCG ++++   F++L ++
Sbjct: 251 NILKLGCDQDNVRLGAQVHGLVVAYGYHLDAVIGSSLVDLYAKCGRIEEAQRLFQLLPEQ 310

Query: 249 NVVSWNSLLVGYAHHGQGEKVMEVFSDMMKKGVSPNGITFVGVLFACVHMGNVELGTRM 73
           + V+W SL+   AH G   +V  +F DM++  V+ +      +L AC  +  +  G ++
Sbjct: 311 DNVTWASLIAACAHQGLSSQVFSIFKDMLESRVNADHFVLSSILKACSTLSALASGKQI 369



 Score = 69.3 bits (168), Expect = 5e-10
 Identities = 42/123 (34%), Positives = 62/123 (50%), Gaps = 6/123 (4%)
 Frame = -3

Query: 423 LKACAFMAALKQGKQVHGQVIIRGVEGYVFVGSALVDMYSKCGDMDDSVLAFRVLDD--- 253
           LKACA +  L +G+Q+H  V   G E  + V +ALVDMY KCG   ++   F    D   
Sbjct: 146 LKACASLKKLIEGQQIHAYVFRLGFESQLLVVTALVDMYVKCGKTLEAQTLFMQRSDGEG 205

Query: 252 ---RNVVSWNSLLVGYAHHGQGEKVMEVFSDMMKKGVSPNGITFVGVLFACVHMGNVELG 82
               ++   NS+L GY ++G     +E+ S M K G+  +  TF  +L       NV LG
Sbjct: 206 SVRESLALSNSMLGGYVNNGHYGDALELISQMYKSGLRLDSFTFGNILKLGCDQDNVRLG 265

Query: 81  TRM 73
            ++
Sbjct: 266 AQV 268



 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 31/93 (33%), Positives = 47/93 (50%)
 Frame = -3

Query: 387 GKQVHGQVIIRGVEGYVFVGSALVDMYSKCGDMDDSVLAFRVLDDRNVVSWNSLLVGYAH 208
           GK +H  +I  G     F+ + L+ MY      + +   F  +  RNVVSW +L+ GY H
Sbjct: 22  GKALHCHIIKCGFGSKTFICNNLISMYMDFCFSESAHKLFDEMPVRNVVSWTTLIAGYTH 81

Query: 207 HGQGEKVMEVFSDMMKKGVSPNGITFVGVLFAC 109
            G+  + +++FS+M      PN  TF   L AC
Sbjct: 82  GGRPNEALKLFSEMEFSPEKPNLFTFSIALKAC 114


>ref|XP_002461865.1| hypothetical protein SORBIDRAFT_02g009560 [Sorghum bicolor]
           gi|241925242|gb|EER98386.1| hypothetical protein
           SORBIDRAFT_02g009560 [Sorghum bicolor]
          Length = 470

 Score =  149 bits (377), Expect = 3e-34
 Identities = 68/144 (47%), Positives = 99/144 (68%)
 Frame = -3

Query: 435 LSSVLKACAFMAALKQGKQVHGQVIIRGVEGYVFVGSALVDMYSKCGDMDDSVLAFRVLD 256
           LS+VL ACA   A++ GK++H QV+  G+E  V+VG++LVDMYSKCG ++ +  AF+ + 
Sbjct: 299 LSAVLLACAHEGAIQTGKRIHNQVVRMGLEDDVYVGTSLVDMYSKCGKVEMAWKAFQKIK 358

Query: 255 DRNVVSWNSLLVGYAHHGQGEKVMEVFSDMMKKGVSPNGITFVGVLFACVHMGNVELGTR 76
            +N++SW +++ GY  HG G++ + VF+DM K G+ PN ITF+ VL AC H G +  G  
Sbjct: 359 GKNILSWTAMIAGYGMHGYGQEALHVFTDMRKSGLKPNYITFISVLAACSHAGLLNEGRY 418

Query: 75  MFEAMKTNYGIVPKKDHYGCMVRL 4
            +  MKT +GI P  +HYGCMV L
Sbjct: 419 WYNTMKTEFGIEPGVEHYGCMVDL 442



 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 33/106 (31%), Positives = 58/106 (54%), Gaps = 4/106 (3%)
 Frame = -3

Query: 378 VHGQVIIRGVEGYVFVGSALVDMYSKCGDMDDSVLAFRVLD--DRNVVSWNSLLVGYAHH 205
           +H  V   G++G+  V + ++D Y+K G  D    A ++ D  +R+VVSWN+++  YA +
Sbjct: 214 IHALVSKIGLDGHTGVVNTMLDAYAKGGGHDLGA-ARKLFDMMERDVVSWNTMIALYAQN 272

Query: 204 GQGEKVMEVFSDMM--KKGVSPNGITFVGVLFACVHMGNVELGTRM 73
           G   + + ++  M+    GV  N +    VL AC H G ++ G R+
Sbjct: 273 GLSTEALGLYRKMLIVGGGVRCNAVALSAVLLACAHEGAIQTGKRI 318


>ref|XP_006292165.1| hypothetical protein CARUB_v10018371mg, partial [Capsella rubella]
           gi|482560872|gb|EOA25063.1| hypothetical protein
           CARUB_v10018371mg, partial [Capsella rubella]
          Length = 849

 Score =  149 bits (375), Expect = 5e-34
 Identities = 72/143 (50%), Positives = 95/143 (66%)
 Frame = -3

Query: 432 SSVLKACAFMAALKQGKQVHGQVIIRGVEGYVFVGSALVDMYSKCGDMDDSVLAFRVLDD 253
           ++VLKACA  A+L  GKQ+HG +I  G    VF GS LVDMY+KCG + D+V  F  + D
Sbjct: 480 ATVLKACASFASLLLGKQLHGFIIRSGNLENVFSGSGLVDMYAKCGSIKDAVQVFAEMPD 539

Query: 252 RNVVSWNSLLVGYAHHGQGEKVMEVFSDMMKKGVSPNGITFVGVLFACVHMGNVELGTRM 73
           RN VSWN+L+  YA +G GE  +  F+ MM+ G+ P+ ++ +GVL AC H G VE GT  
Sbjct: 540 RNAVSWNALISAYADNGDGEAAIGAFTTMMQSGLQPDSVSILGVLTACSHCGLVEQGTEY 599

Query: 72  FEAMKTNYGIVPKKDHYGCMVRL 4
           F+AM T YGI P + HY CM+ L
Sbjct: 600 FQAMSTIYGITPTRKHYACMLDL 622



 Score = 77.0 bits (188), Expect = 2e-12
 Identities = 38/120 (31%), Positives = 69/120 (57%)
 Frame = -3

Query: 432 SSVLKACAFMAALKQGKQVHGQVIIRGVEGYVFVGSALVDMYSKCGDMDDSVLAFRVLDD 253
           ++VL   A +++L+ G+QVH Q I+   +  + VG++LVDMY++C    ++   F+ L  
Sbjct: 379 ATVLSIAANLSSLQMGRQVHCQAILATADSILHVGNSLVDMYARCEMFKEAEFIFKSLSQ 438

Query: 252 RNVVSWNSLLVGYAHHGQGEKVMEVFSDMMKKGVSPNGITFVGVLFACVHMGNVELGTRM 73
           ++ VSW +L+ G  H G  E  +++F+ M    +  +  TF  VL AC    ++ LG ++
Sbjct: 439 QSTVSWTALISGLVHTGLHEAGLKLFTKMRGANLRADQSTFATVLKACASFASLLLGKQL 498



 Score = 59.7 bits (143), Expect = 4e-07
 Identities = 37/122 (30%), Positives = 63/122 (51%), Gaps = 2/122 (1%)
 Frame = -3

Query: 432 SSVLKACAFMAALKQGKQVHGQVIIRGVEGYVF--VGSALVDMYSKCGDMDDSVLAFRVL 259
           +++L AC          QVH   I  G +  +F  V + L+  Y + G +D + L F  +
Sbjct: 175 TTLLPACTDAVPQDVVGQVHAFAIKLGFDTNLFLTVCNVLIKSYCEIGRLDLAYLVFEEI 234

Query: 258 DDRNVVSWNSLLVGYAHHGQGEKVMEVFSDMMKKGVSPNGITFVGVLFACVHMGNVELGT 79
            D++ V++N+L+ GY  HG   + + +F  M + G  P+  TF GVL A V + +  LG 
Sbjct: 235 LDKDSVTFNTLITGYEKHGLYMEAIHLFLQMRQSGHKPSDFTFSGVLKAVVGLHDFPLGQ 294

Query: 78  RM 73
           ++
Sbjct: 295 QL 296


>tpg|DAA39404.1| TPA: hypothetical protein ZEAMMB73_882385 [Zea mays]
          Length = 668

 Score =  149 bits (375), Expect = 5e-34
 Identities = 67/144 (46%), Positives = 100/144 (69%)
 Frame = -3

Query: 435 LSSVLKACAFMAALKQGKQVHGQVIIRGVEGYVFVGSALVDMYSKCGDMDDSVLAFRVLD 256
           LS+VL ACA   A++ GK++H QV+  G+E  V+VG+++VDMYSKCG ++ +  AF+ + 
Sbjct: 299 LSAVLLACAHAGAIQTGKRIHNQVVRMGLEDNVYVGTSVVDMYSKCGKVEMAWKAFQKIK 358

Query: 255 DRNVVSWNSLLVGYAHHGQGEKVMEVFSDMMKKGVSPNGITFVGVLFACVHMGNVELGTR 76
            +N++SW++++ GY  HG G++ + VF+DM K G+ PN ITF+ VL AC H G +  G  
Sbjct: 359 GKNILSWSAMIAGYGMHGYGQEALHVFTDMRKSGLKPNYITFITVLAACSHAGLLSEGRY 418

Query: 75  MFEAMKTNYGIVPKKDHYGCMVRL 4
            +  MKT +GI P  +HYGCMV L
Sbjct: 419 WYNTMKTEFGIEPGVEHYGCMVDL 442



 Score = 62.4 bits (150), Expect = 6e-08
 Identities = 36/106 (33%), Positives = 59/106 (55%), Gaps = 4/106 (3%)
 Frame = -3

Query: 378 VHGQVIIRGVEGYVFVGSALVDMYSKCGDMDDSVLAFRVLD--DRNVVSWNSLLVGYAHH 205
           +H  V   G++G   V + ++D Y+K G  D    A ++ D  DR+VVSWN+++  YA +
Sbjct: 214 IHALVSKIGLDGQTGVANTIIDAYAKGGGHDLGA-ARKLFDMMDRDVVSWNTMIALYAQN 272

Query: 204 GQGEKVMEVFSDMMKKG--VSPNGITFVGVLFACVHMGNVELGTRM 73
           G   + + ++S M+  G  V  N +T   VL AC H G ++ G R+
Sbjct: 273 GLSTEALGLYSKMLIVGGDVRCNAVTLSAVLLACAHAGAIQTGKRI 318


>ref|NP_193141.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|223635650|sp|O23266.3|PP308_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At4g14050, mitochondrial; Flags: Precursor
           gi|332657965|gb|AEE83365.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 612

 Score =  148 bits (374), Expect = 6e-34
 Identities = 70/145 (48%), Positives = 99/145 (68%)
 Frame = -3

Query: 438 VLSSVLKACAFMAALKQGKQVHGQVIIRGVEGYVFVGSALVDMYSKCGDMDDSVLAFRVL 259
           VLSS++ ACA +AA   G+QVHG VI  G +  VF+ +AL+DMY+KC D+  +   F  +
Sbjct: 240 VLSSIVGACANLAASIAGRQVHGLVIALGFDSCVFISNALIDMYAKCSDVIAAKDIFSRM 299

Query: 258 DDRNVVSWNSLLVGYAHHGQGEKVMEVFSDMMKKGVSPNGITFVGVLFACVHMGNVELGT 79
             R+VVSW SL+VG A HGQ EK + ++ DM+  GV PN +TFVG+++AC H+G VE G 
Sbjct: 300 RHRDVVSWTSLIVGMAQHGQAEKALALYDDMVSHGVKPNEVTFVGLIYACSHVGFVEKGR 359

Query: 78  RMFEAMKTNYGIVPKKDHYGCMVRL 4
            +F++M  +YGI P   HY C++ L
Sbjct: 360 ELFQSMTKDYGIRPSLQHYTCLLDL 384



 Score = 69.7 bits (169), Expect = 4e-10
 Identities = 32/88 (36%), Positives = 55/88 (62%)
 Frame = -3

Query: 438 VLSSVLKACAFMAALKQGKQVHGQVIIRGVEGYVFVGSALVDMYSKCGDMDDSVLAFRVL 259
           V S+++KACA + ++  G+QVH   I+        V S+LVDMY+KCG ++ +   F  +
Sbjct: 107 VFSALVKACANLGSIDHGRQVHCHFIVSEYANDEVVKSSLVDMYAKCGLLNSAKAVFDSI 166

Query: 258 DDRNVVSWNSLLVGYAHHGQGEKVMEVF 175
             +N +SW +++ GYA  G+ E+ +E+F
Sbjct: 167 RVKNTISWTAMVSGYAKSGRKEEALELF 194



 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 29/118 (24%), Positives = 58/118 (49%), Gaps = 1/118 (0%)
 Frame = -3

Query: 423 LKACAFMAALKQGKQVHGQVIIRGVEGYVFVGSALVDMYSKCGDMDDSVLAFRVLDDRNV 244
           L+ CA    L   K +H  ++  G+     + + LV++Y KCG    ++  F  +  R+ 
Sbjct: 10  LQLCARNRTLTTAKALHAHIVKLGIVQCCPLANTLVNVYGKCGAASHALQVFDEMPHRDH 69

Query: 243 VSWNSLLVGYAHHGQGEKVMEVFSDM-MKKGVSPNGITFVGVLFACVHMGNVELGTRM 73
           ++W S+L          K + VFS +    G+ P+   F  ++ AC ++G+++ G ++
Sbjct: 70  IAWASVLTALNQANLSGKTLSVFSSVGSSSGLRPDDFVFSALVKACANLGSIDHGRQV 127


>ref|NP_001059421.1| Os07g0299800 [Oryza sativa Japonica Group]
           gi|34394298|dbj|BAC84780.1| putative pentatricopeptide
           (PPR) repeat-containing protein [Oryza sativa Japonica
           Group] gi|113610957|dbj|BAF21335.1| Os07g0299800 [Oryza
           sativa Japonica Group]
          Length = 673

 Score =  148 bits (374), Expect = 6e-34
 Identities = 65/144 (45%), Positives = 103/144 (71%)
 Frame = -3

Query: 435 LSSVLKACAFMAALKQGKQVHGQVIIRGVEGYVFVGSALVDMYSKCGDMDDSVLAFRVLD 256
           LS+VL ACA   A++ GK++H QV+  G+E  V+VG+++VDMYSKCG ++ +  AFR + 
Sbjct: 304 LSAVLLACAHAGAIQTGKRIHNQVVRMGLEENVYVGTSIVDMYSKCGRVEMASRAFRKIK 363

Query: 255 DRNVVSWNSLLVGYAHHGQGEKVMEVFSDMMKKGVSPNGITFVGVLFACVHMGNVELGTR 76
           ++N++SW++++ GY  HG+G++ +E+F++M + G+ PN ITF+ VL AC H G ++ G  
Sbjct: 364 EKNILSWSAMITGYGMHGRGQEALEIFTEMKRSGLRPNYITFISVLAACSHAGLLDEGRY 423

Query: 75  MFEAMKTNYGIVPKKDHYGCMVRL 4
            + AMK  +GI    +HYGCMV L
Sbjct: 424 WYNAMKQEFGIEAGVEHYGCMVDL 447



 Score = 59.3 bits (142), Expect = 5e-07
 Identities = 35/106 (33%), Positives = 57/106 (53%), Gaps = 4/106 (3%)
 Frame = -3

Query: 378 VHGQVIIRGVEGYVFVGSALVDMYSKCGDMDDSVLAFRVLD--DRNVVSWNSLLVGYAHH 205
           +H  +   G E    V + ++D Y+K G  D  V A +V D  +R+VVSWNS++  YA +
Sbjct: 219 LHALIAKIGFERNAGVVNTMLDSYAKGGSRDLEV-ARKVFDTMERDVVSWNSMIALYAQN 277

Query: 204 GQGEKVMEVFSDMMK--KGVSPNGITFVGVLFACVHMGNVELGTRM 73
           G   + + ++S M+    G+  N +    VL AC H G ++ G R+
Sbjct: 278 GMSAEAIGLYSKMLNVGGGIKCNAVALSAVLLACAHAGAIQTGKRI 323


>gb|EAZ25232.1| hypothetical protein OsJ_09035 [Oryza sativa Japonica Group]
          Length = 674

 Score =  148 bits (374), Expect = 6e-34
 Identities = 65/144 (45%), Positives = 103/144 (71%)
 Frame = -3

Query: 435 LSSVLKACAFMAALKQGKQVHGQVIIRGVEGYVFVGSALVDMYSKCGDMDDSVLAFRVLD 256
           LS+VL ACA   A++ GK++H QV+  G+E  V+VG+++VDMYSKCG ++ +  AFR + 
Sbjct: 305 LSAVLLACAHAGAIQTGKRIHNQVVRMGLEENVYVGTSIVDMYSKCGRVEMASRAFRKIK 364

Query: 255 DRNVVSWNSLLVGYAHHGQGEKVMEVFSDMMKKGVSPNGITFVGVLFACVHMGNVELGTR 76
           ++N++SW++++ GY  HG+G++ +E+F++M + G+ PN ITF+ VL AC H G ++ G  
Sbjct: 365 EKNILSWSAMITGYGMHGRGQEALEIFTEMKRSGLRPNYITFISVLAACSHAGLLDEGRY 424

Query: 75  MFEAMKTNYGIVPKKDHYGCMVRL 4
            + AMK  +GI    +HYGCMV L
Sbjct: 425 WYNAMKQEFGIEAGVEHYGCMVDL 448



 Score = 59.3 bits (142), Expect = 5e-07
 Identities = 35/106 (33%), Positives = 57/106 (53%), Gaps = 4/106 (3%)
 Frame = -3

Query: 378 VHGQVIIRGVEGYVFVGSALVDMYSKCGDMDDSVLAFRVLD--DRNVVSWNSLLVGYAHH 205
           +H  +   G E    V + ++D Y+K G  D  V A +V D  +R+VVSWNS++  YA +
Sbjct: 220 LHALIAKIGFERNAGVVNTMLDSYAKGGSRDLEV-ARKVFDTMERDVVSWNSMIALYAQN 278

Query: 204 GQGEKVMEVFSDMMK--KGVSPNGITFVGVLFACVHMGNVELGTRM 73
           G   + + ++S M+    G+  N +    VL AC H G ++ G R+
Sbjct: 279 GMSAEAIGLYSKMLNVGGGIKCNAVALSAVLLACAHAGAIQTGKRI 324


>gb|EEE68333.1| hypothetical protein OsJ_26615 [Oryza sativa Japonica Group]
          Length = 983

 Score =  148 bits (373), Expect = 8e-34
 Identities = 68/145 (46%), Positives = 99/145 (68%)
 Frame = -3

Query: 438 VLSSVLKACAFMAALKQGKQVHGQVIIRGVEGYVFVGSALVDMYSKCGDMDDSVLAFRVL 259
           VL  VL ACA +  L+QGK VHG +    +   VF+G+ALVDMY+KCG+M  ++  F+V+
Sbjct: 345 VLVGVLAACAQLGVLEQGKWVHGYLKANNIRITVFLGTALVDMYAKCGEMQLAMEVFKVM 404

Query: 258 DDRNVVSWNSLLVGYAHHGQGEKVMEVFSDMMKKGVSPNGITFVGVLFACVHMGNVELGT 79
            ++NV++W +++ G A HG+G + +E+FS M + GV P+ I F+G L AC H G V+ G 
Sbjct: 405 KEKNVLAWTTMIKGLAMHGRGSEALELFSQMERLGVKPDDIAFIGALCACTHTGLVDKGR 464

Query: 78  RMFEAMKTNYGIVPKKDHYGCMVRL 4
            +F++M   YGI PK +HYGCMV L
Sbjct: 465 ELFDSMVRKYGIKPKIEHYGCMVDL 489



 Score = 63.2 bits (152), Expect = 4e-08
 Identities = 30/92 (32%), Positives = 50/92 (54%)
 Frame = -3

Query: 327 SALVDMYSKCGDMDDSVLAFRVLDDRNVVSWNSLLVGYAHHGQGEKVMEVFSDMMKKGVS 148
           + L+  Y++ G + D+   F  +  RN VSW++++ GY   G G + + +F+ M   GV 
Sbjct: 281 NTLITAYARAGRVTDARALFDEMPARNAVSWSAMVNGYVQAGDGREALGLFARMQADGVR 340

Query: 147 PNGITFVGVLFACVHMGNVELGTRMFEAMKTN 52
           P+    VGVL AC  +G +E G  +   +K N
Sbjct: 341 PDDTVLVGVLAACAQLGVLEQGKWVHGYLKAN 372


>emb|CAN77232.1| hypothetical protein VITISV_001089 [Vitis vinifera]
          Length = 575

 Score =  148 bits (373), Expect = 8e-34
 Identities = 69/142 (48%), Positives = 96/142 (67%)
 Frame = -3

Query: 429 SVLKACAFMAALKQGKQVHGQVIIRGVEGYVFVGSALVDMYSKCGDMDDSVLAFRVLDDR 250
           SVL AC  + AL+ G+ VH  +   G++  V VG+ALVDMYSKCG ++D+ L F  +DD+
Sbjct: 208 SVLSACGQLGALESGRWVHSYIENNGIQFNVHVGTALVDMYSKCGSLEDARLVFDKIDDK 267

Query: 249 NVVSWNSLLVGYAHHGQGEKVMEVFSDMMKKGVSPNGITFVGVLFACVHMGNVELGTRMF 70
           +VV+WNS++VGYA  G  ++ +++F  M + G+ P  ITF+G+L AC H G V  G  +F
Sbjct: 268 DVVAWNSMIVGYAMXGFSQEALQLFKSMCRMGLHPTNITFIGILSACGHSGWVTEGWDIF 327

Query: 69  EAMKTNYGIVPKKDHYGCMVRL 4
             MK  YGI PK +HYGCMV L
Sbjct: 328 NKMKDEYGIEPKIEHYGCMVNL 349



 Score = 63.9 bits (154), Expect = 2e-08
 Identities = 39/158 (24%), Positives = 73/158 (46%), Gaps = 31/158 (19%)
 Frame = -3

Query: 432 SSVLKACAFMAALKQGKQVHGQVIIRGVEGYVFVGSALVDMYSKCGD------------- 292
           SS+LK C     ++ GK +H Q +  G +  ++V + L+D+Y++ GD             
Sbjct: 79  SSILKLCP----IEPGKALHSQAVKLGFDSDLYVRTGLLDVYARGGDVVSAQQLFDTMPE 134

Query: 291 ------------------MDDSVLAFRVLDDRNVVSWNSLLVGYAHHGQGEKVMEVFSDM 166
                             +D + + F  +++R+ V WN ++ GY  +G   + + +F  M
Sbjct: 135 KSLVSLTAMLTCYAKHGELDAARVLFDGMEERDGVCWNVMIDGYTQNGMPNEALVLFRRM 194

Query: 165 MKKGVSPNGITFVGVLFACVHMGNVELGTRMFEAMKTN 52
           +K    PN +T + VL AC  +G +E G  +   ++ N
Sbjct: 195 LKAKAKPNEVTVLSVLSACGQLGALESGRWVHSYIENN 232


>gb|EAZ03563.1| hypothetical protein OsI_25699 [Oryza sativa Indica Group]
          Length = 528

 Score =  148 bits (373), Expect = 8e-34
 Identities = 65/144 (45%), Positives = 102/144 (70%)
 Frame = -3

Query: 435 LSSVLKACAFMAALKQGKQVHGQVIIRGVEGYVFVGSALVDMYSKCGDMDDSVLAFRVLD 256
           LS+VL ACA   A++ GK +H QV+  G+E  V+VG+++VDMYSKCG ++ +  AFR + 
Sbjct: 159 LSAVLLACAHAGAIQTGKHIHNQVVRMGLEENVYVGTSIVDMYSKCGRVEMASRAFRKIK 218

Query: 255 DRNVVSWNSLLVGYAHHGQGEKVMEVFSDMMKKGVSPNGITFVGVLFACVHMGNVELGTR 76
           ++N++SW++++ GY  HG+G++ +E+F++M + G+ PN ITF+ VL AC H G ++ G  
Sbjct: 219 EKNILSWSAMITGYGMHGRGQEALEIFTEMKRSGLRPNYITFISVLAACSHAGLLDEGRY 278

Query: 75  MFEAMKTNYGIVPKKDHYGCMVRL 4
            + AMK  +GI    +HYGCMV L
Sbjct: 279 WYNAMKQEFGIEAGVEHYGCMVDL 302



 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 34/103 (33%), Positives = 55/103 (53%), Gaps = 4/103 (3%)
 Frame = -3

Query: 378 VHGQVIIRGVEGYVFVGSALVDMYSKCGDMDDSVLAFRVLD--DRNVVSWNSLLVGYAHH 205
           +H  +   G E    V + ++D Y+K G  D  V A +V D  +R+VVSWNS++  YA +
Sbjct: 74  LHALIAKIGFERNAGVVNTMLDSYAKGGSRDLEV-ARKVFDTMERDVVSWNSMIALYAQN 132

Query: 204 GQGEKVMEVFSDMMK--KGVSPNGITFVGVLFACVHMGNVELG 82
           G   + + ++S M+    G+  N +    VL AC H G ++ G
Sbjct: 133 GMSAEAIGLYSKMLNVGGGIKCNAVALSAVLLACAHAGAIQTG 175


>ref|NP_001061372.1| Os08g0249600 [Oryza sativa Japonica Group]
           gi|113623341|dbj|BAF23286.1| Os08g0249600 [Oryza sativa
           Japonica Group]
          Length = 951

 Score =  148 bits (373), Expect = 8e-34
 Identities = 68/145 (46%), Positives = 99/145 (68%)
 Frame = -3

Query: 438 VLSSVLKACAFMAALKQGKQVHGQVIIRGVEGYVFVGSALVDMYSKCGDMDDSVLAFRVL 259
           VL  VL ACA +  L+QGK VHG +    +   VF+G+ALVDMY+KCG+M  ++  F+V+
Sbjct: 345 VLVGVLAACAQLGVLEQGKWVHGYLKANNIRITVFLGTALVDMYAKCGEMQLAMEVFKVM 404

Query: 258 DDRNVVSWNSLLVGYAHHGQGEKVMEVFSDMMKKGVSPNGITFVGVLFACVHMGNVELGT 79
            ++NV++W +++ G A HG+G + +E+FS M + GV P+ I F+G L AC H G V+ G 
Sbjct: 405 KEKNVLAWTTMIKGLAMHGRGSEALELFSQMERLGVKPDDIAFIGALCACTHTGLVDKGR 464

Query: 78  RMFEAMKTNYGIVPKKDHYGCMVRL 4
            +F++M   YGI PK +HYGCMV L
Sbjct: 465 ELFDSMVRKYGIKPKIEHYGCMVDL 489



 Score = 63.2 bits (152), Expect = 4e-08
 Identities = 30/92 (32%), Positives = 50/92 (54%)
 Frame = -3

Query: 327 SALVDMYSKCGDMDDSVLAFRVLDDRNVVSWNSLLVGYAHHGQGEKVMEVFSDMMKKGVS 148
           + L+  Y++ G + D+   F  +  RN VSW++++ GY   G G + + +F+ M   GV 
Sbjct: 281 NTLITAYARAGRVTDARALFDEMPARNAVSWSAMVNGYVQAGDGREALGLFARMQADGVR 340

Query: 147 PNGITFVGVLFACVHMGNVELGTRMFEAMKTN 52
           P+    VGVL AC  +G +E G  +   +K N
Sbjct: 341 PDDTVLVGVLAACAQLGVLEQGKWVHGYLKAN 372


>ref|XP_006283355.1| hypothetical protein CARUB_v10004398mg [Capsella rubella]
           gi|482552060|gb|EOA16253.1| hypothetical protein
           CARUB_v10004398mg [Capsella rubella]
          Length = 612

 Score =  147 bits (372), Expect = 1e-33
 Identities = 71/146 (48%), Positives = 99/146 (67%)
 Frame = -3

Query: 438 VLSSVLKACAFMAALKQGKQVHGQVIIRGVEGYVFVGSALVDMYSKCGDMDDSVLAFRVL 259
           VLSS++ ACA +AA   G+QVHG VI  G +  VF+ +AL+DMY+KC D+  +   F  +
Sbjct: 240 VLSSIVGACANLAASIAGRQVHGLVIGLGFDSCVFISNALIDMYAKCSDVIAAKDIFSRM 299

Query: 258 DDRNVVSWNSLLVGYAHHGQGEKVMEVFSDMMKKGVSPNGITFVGVLFACVHMGNVELGT 79
             R+VVSW SL+VG A HGQ EK + V+ DM+  GV PN +TFVG+++AC H+G V  G 
Sbjct: 300 RHRDVVSWTSLIVGMAQHGQAEKALAVYDDMVSHGVKPNEVTFVGLIYACSHVGFVVKGR 359

Query: 78  RMFEAMKTNYGIVPKKDHYGCMVRLF 1
            +F++M  +YGI P   HY C++ LF
Sbjct: 360 ALFQSMTKDYGIRPSLQHYTCLLDLF 385



 Score = 74.7 bits (182), Expect = 1e-11
 Identities = 34/96 (35%), Positives = 59/96 (61%)
 Frame = -3

Query: 438 VLSSVLKACAFMAALKQGKQVHGQVIIRGVEGYVFVGSALVDMYSKCGDMDDSVLAFRVL 259
           V S+++KACA + +++ GKQVH   ++        V S+LVDMY+KCG +D +   F  +
Sbjct: 107 VFSALVKACANLGSIEHGKQVHCHFLVSEYSSDDVVKSSLVDMYAKCGLLDSAKAVFESI 166

Query: 258 DDRNVVSWNSLLVGYAHHGQGEKVMEVFSDMMKKGV 151
             +N +SW +++ GYA  G+ E+ +E+F  +  K +
Sbjct: 167 RVKNTISWTAMVSGYAKSGRKEEALELFRKLPAKNL 202



 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 31/118 (26%), Positives = 59/118 (50%), Gaps = 1/118 (0%)
 Frame = -3

Query: 423 LKACAFMAALKQGKQVHGQVIIRGVEGYVFVGSALVDMYSKCGDMDDSVLAFRVLDDRNV 244
           L+ CA    L  GK +H  ++  G+     + + LV++Y KCG    ++  F  +  R+ 
Sbjct: 10  LQLCARNRTLTTGKALHAHIVKLGIVQCCPLANTLVNVYGKCGAASYALKLFDEMPQRDH 69

Query: 243 VSWNSLLVGYAHHGQGEKVMEVFSDM-MKKGVSPNGITFVGVLFACVHMGNVELGTRM 73
           ++W S+L          K + VFS +    G+ P+   F  ++ AC ++G++E G ++
Sbjct: 70  IAWASVLTALNQANLSGKTLSVFSSVGSSVGLRPDDFVFSALVKACANLGSIEHGKQV 127


>gb|EEC83198.1| hypothetical protein OsI_28453 [Oryza sativa Indica Group]
          Length = 639

 Score =  147 bits (372), Expect = 1e-33
 Identities = 68/145 (46%), Positives = 99/145 (68%)
 Frame = -3

Query: 438 VLSSVLKACAFMAALKQGKQVHGQVIIRGVEGYVFVGSALVDMYSKCGDMDDSVLAFRVL 259
           VL  VL ACA +  L+QGK VHG +    +   VF+G+ALVDMY+KCG+M  ++  F+V+
Sbjct: 138 VLVGVLVACAQLGVLEQGKWVHGYLKANNIRITVFLGTALVDMYAKCGEMQLAMEVFKVM 197

Query: 258 DDRNVVSWNSLLVGYAHHGQGEKVMEVFSDMMKKGVSPNGITFVGVLFACVHMGNVELGT 79
            ++NV++W +++ G A HG+G + +E+FS M + GV P+ I F+G L AC H G V+ G 
Sbjct: 198 KEKNVLAWTTMIKGLAMHGRGSEALELFSQMERLGVKPDDIAFIGALCACTHTGLVDKGR 257

Query: 78  RMFEAMKTNYGIVPKKDHYGCMVRL 4
            +F++M   YGI PK +HYGCMV L
Sbjct: 258 ELFDSMVRKYGIKPKIEHYGCMVDL 282


>ref|XP_004956000.1| PREDICTED: pentatricopeptide repeat-containing protein At3g26782,
           mitochondrial-like isoform X1 [Setaria italica]
           gi|514726520|ref|XP_004956001.1| PREDICTED:
           pentatricopeptide repeat-containing protein At3g26782,
           mitochondrial-like isoform X2 [Setaria italica]
           gi|514726524|ref|XP_004956002.1| PREDICTED:
           pentatricopeptide repeat-containing protein At3g26782,
           mitochondrial-like isoform X3 [Setaria italica]
           gi|514726528|ref|XP_004956003.1| PREDICTED:
           pentatricopeptide repeat-containing protein At3g26782,
           mitochondrial-like isoform X4 [Setaria italica]
           gi|514726532|ref|XP_004956004.1| PREDICTED:
           pentatricopeptide repeat-containing protein At3g26782,
           mitochondrial-like isoform X5 [Setaria italica]
          Length = 668

 Score =  147 bits (370), Expect = 2e-33
 Identities = 66/144 (45%), Positives = 100/144 (69%)
 Frame = -3

Query: 435 LSSVLKACAFMAALKQGKQVHGQVIIRGVEGYVFVGSALVDMYSKCGDMDDSVLAFRVLD 256
           LS+VL ACA   A++ GK++H QV+  G+E  V+VG+++VDMYSKCG ++ +  AF  + 
Sbjct: 299 LSAVLLACAHAGAIQTGKRIHNQVVRMGLEENVYVGTSVVDMYSKCGRVEMARKAFCRIK 358

Query: 255 DRNVVSWNSLLVGYAHHGQGEKVMEVFSDMMKKGVSPNGITFVGVLFACVHMGNVELGTR 76
           ++N++SW++++ GY  HG G++ +EVFS+M + G+ PN ITF+ VL AC H G +  G  
Sbjct: 359 EKNILSWSAMIAGYGMHGHGQEALEVFSEMRRSGLKPNYITFISVLAACSHAGLLNEGRH 418

Query: 75  MFEAMKTNYGIVPKKDHYGCMVRL 4
            + AM   +GI P  +HYGCMV L
Sbjct: 419 WYNAMSKEFGIEPGVEHYGCMVDL 442



 Score = 60.1 bits (144), Expect = 3e-07
 Identities = 32/106 (30%), Positives = 58/106 (54%), Gaps = 4/106 (3%)
 Frame = -3

Query: 378 VHGQVIIRGVEGYVFVGSALVDMYSKCGDMDDSVLAFRVLD--DRNVVSWNSLLVGYAHH 205
           +H  V+  G++G+  V + ++D Y+K G  D    A ++ D  +R+ VSWN+++  YA +
Sbjct: 214 IHALVVKIGLDGHAGVANTMLDAYAKGGGHDLGA-ARKLFDMMERDAVSWNTMIALYAQN 272

Query: 204 GQGEKVMEVFSDMMKKG--VSPNGITFVGVLFACVHMGNVELGTRM 73
           G   + +  +  M+  G  +  N +T   VL AC H G ++ G R+
Sbjct: 273 GLSTEALGFYGKMLNVGGGIRCNAVTLSAVLLACAHAGAIQTGKRI 318


>gb|EOY09977.1| Pentatricopeptide repeat superfamily protein, putative isoform 1
           [Theobroma cacao] gi|508718081|gb|EOY09978.1|
           Pentatricopeptide repeat superfamily protein, putative
           isoform 1 [Theobroma cacao] gi|508718082|gb|EOY09979.1|
           Pentatricopeptide repeat superfamily protein, putative
           isoform 1 [Theobroma cacao] gi|508718083|gb|EOY09980.1|
           Pentatricopeptide repeat superfamily protein, putative
           isoform 1 [Theobroma cacao]
          Length = 777

 Score =  147 bits (370), Expect = 2e-33
 Identities = 63/141 (44%), Positives = 100/141 (70%)
 Frame = -3

Query: 432 SSVLKACAFMAALKQGKQVHGQVIIRGVEGYVFVGSALVDMYSKCGDMDDSVLAFRVLDD 253
           +++L  CA +++  QG+QVH Q++  G   YVFVG+ALVDMY KCGD+D +   F  +  
Sbjct: 526 TAILSCCAKLSSSFQGRQVHSQIVKDGFMNYVFVGTALVDMYCKCGDIDGARKYFDKMPV 585

Query: 252 RNVVSWNSLLVGYAHHGQGEKVMEVFSDMMKKGVSPNGITFVGVLFACVHMGNVELGTRM 73
           RN V+WN ++ GYA +G+G++ + ++ +M+  G  P+GITF+ VL AC H G V+LG R+
Sbjct: 586 RNTVTWNEMIHGYAQNGRGDEAVHLYKNMIASGEKPDGITFIAVLTACSHSGLVDLGVRI 645

Query: 72  FEAMKTNYGIVPKKDHYGCMV 10
           F +M+++YG+ P+ DHY C++
Sbjct: 646 FNSMQSDYGLEPELDHYTCII 666



 Score = 89.0 bits (219), Expect = 6e-16
 Identities = 49/141 (34%), Positives = 76/141 (53%), Gaps = 16/141 (11%)
 Frame = -3

Query: 435 LSSVLKACA----------------FMAALKQGKQVHGQVIIRGVEGYVFVGSALVDMYS 304
           LS+VL AC                 F+ ++  G+QVHG V+  G E  +++ ++L+DMY+
Sbjct: 241 LSAVLSACTKGGEYGEFGCCRENDRFLCSVVLGEQVHGLVVKLGFECDLYLSNSLLDMYA 300

Query: 303 KCGDMDDSVLAFRVLDDRNVVSWNSLLVGYAHHGQGEKVMEVFSDMMKKGVSPNGITFVG 124
           K G+M  +   F  L   +VVSWN ++ GY   GQ EK +E    M      P+ +T++ 
Sbjct: 301 KNGNMKSAETIFSNLGKGSVVSWNIMIAGYGQKGQKEKAVECLRRMQCCSFEPDEVTYIN 360

Query: 123 VLFACVHMGNVELGTRMFEAM 61
           +L AC   G+VE   RMF++M
Sbjct: 361 MLAACSKCGDVETARRMFDSM 381



 Score = 72.8 bits (177), Expect = 4e-11
 Identities = 45/143 (31%), Positives = 75/143 (52%)
 Frame = -3

Query: 432 SSVLKACAFMAALKQGKQVHGQVIIRGVEGYVFVGSALVDMYSKCGDMDDSVLAFRVLDD 253
           +SVL AC  +  L+ GK+ HG VI  G++  +FV + L+ +Y+KCG M +++  F  +DD
Sbjct: 141 ASVLSACGSVVHLELGKRCHGLVIKIGLDKNIFVCNGLLSVYAKCGVMKEAIKVFGDIDD 200

Query: 252 RNVVSWNSLLVGYAHHGQGEKVMEVFSDMMKKGVSPNGITFVGVLFACVHMGNVELGTRM 73
            N V++ +++ G        + +E+F  M +KGV  + ++   VL AC   G  E G   
Sbjct: 201 PNEVTFTTMMGGLGKIDGVFEALEMFRMMRRKGVQIDSVSLSAVLSACTKGG--EYG--- 255

Query: 72  FEAMKTNYGIVPKKDHYGCMVRL 4
                  +G   + D + C V L
Sbjct: 256 ------EFGCCRENDRFLCSVVL 272



 Score = 63.5 bits (153), Expect = 3e-08
 Identities = 31/111 (27%), Positives = 56/111 (50%)
 Frame = -3

Query: 426 VLKACAFMAALKQGKQVHGQVIIRGVEGYVFVGSALVDMYSKCGDMDDSVLAFRVLDDRN 247
           +L +CA M  L+ GKQVH       +    +V S L+ MYSKCG +  +   F  + + +
Sbjct: 427 ILGSCAGMEFLEGGKQVHAASQKAALYTDNYVASGLIGMYSKCGKIKMAECIFSYVPELD 486

Query: 246 VVSWNSLLVGYAHHGQGEKVMEVFSDMMKKGVSPNGITFVGVLFACVHMGN 94
           +V WNS++ G   +   ++   +F  M + G+ P   ++  +L  C  + +
Sbjct: 487 IVCWNSMIAGLTLNSLDKEAFMLFKQMQQGGMLPTEFSYTAILSCCAKLSS 537



 Score = 60.8 bits (146), Expect = 2e-07
 Identities = 39/151 (25%), Positives = 71/151 (47%), Gaps = 31/151 (20%)
 Frame = -3

Query: 435 LSSVLKACAFMAALKQGKQVHGQVIIRGVEGYVFVGSALVDMYSKCGDMD---------- 286
           ++++L+ C    ++  GK +H  +    +    F+ + L+++YSKC D            
Sbjct: 8   VANLLQTCIDKKSILPGKVLHAYIFRSNLLANTFLCNRLIELYSKCNDPTSAHHMFDQTP 67

Query: 285 -------DSVLA--------------FRVLDDRNVVSWNSLLVGYAHHGQGEKVMEVFSD 169
                  ++VL+              F  + +RNV SWN+L+     +G  EK ++V+  
Sbjct: 68  QKNIYSWNAVLSALCKAGNLTFARKVFEQMPERNVASWNNLISLMVKNGFQEKALDVYKL 127

Query: 168 MMKKGVSPNGITFVGVLFACVHMGNVELGTR 76
           M+ +G  P  +TF  VL AC  + ++ELG R
Sbjct: 128 MVFEGFLPTHVTFASVLSACGSVVHLELGKR 158