BLASTX nr result
ID: Ephedra25_contig00024899
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra25_contig00024899
(789 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006827602.1| hypothetical protein AMTR_s00009p00238900 [A... 78 1e-32
ref|XP_006445035.1| hypothetical protein CICLE_v10018441mg [Citr... 69 2e-25
ref|XP_006445033.1| hypothetical protein CICLE_v10018441mg [Citr... 69 2e-25
ref|XP_004306783.1| PREDICTED: mediator of RNA polymerase II tra... 70 8e-25
ref|XP_006339570.1| PREDICTED: mediator of RNA polymerase II tra... 68 1e-24
ref|XP_004229878.1| PREDICTED: mediator of RNA polymerase II tra... 66 5e-24
gb|EMJ21769.1| hypothetical protein PRUPE_ppa000036mg [Prunus pe... 65 2e-23
ref|XP_002274479.2| PREDICTED: uncharacterized protein LOC100263... 64 3e-23
emb|CBI40380.3| unnamed protein product [Vitis vinifera] 64 3e-23
ref|XP_002302587.2| CRYPTIC PRECOCIOUS family protein [Populus t... 63 2e-22
ref|XP_004986068.1| PREDICTED: mediator of RNA polymerase II tra... 67 3e-22
ref|XP_004155825.1| PREDICTED: mediator of RNA polymerase II tra... 63 1e-21
ref|XP_004510784.1| PREDICTED: mediator of RNA polymerase II tra... 66 2e-21
gb|EEE67704.1| hypothetical protein OsJ_25372 [Oryza sativa Japo... 62 2e-21
ref|XP_002466024.1| hypothetical protein SORBIDRAFT_01g050280 [S... 61 2e-21
gb|EEC82567.1| hypothetical protein OsI_27117 [Oryza sativa Indi... 62 2e-21
ref|XP_004133865.1| PREDICTED: mediator of RNA polymerase II tra... 63 4e-21
gb|EMS47933.1| Putative mediator of RNA polymerase II transcript... 59 5e-21
ref|XP_002320796.2| hypothetical protein POPTR_0014s080202g, par... 60 5e-21
tpg|DAA42829.1| TPA: hypothetical protein ZEAMMB73_708082 [Zea m... 64 9e-21
>ref|XP_006827602.1| hypothetical protein AMTR_s00009p00238900 [Amborella trichopoda]
gi|548832222|gb|ERM95018.1| hypothetical protein
AMTR_s00009p00238900 [Amborella trichopoda]
Length = 2276
Score = 78.2 bits (191), Expect(3) = 1e-32
Identities = 41/61 (67%), Positives = 47/61 (77%), Gaps = 1/61 (1%)
Frame = +2
Query: 551 PPSAAALQTSLWMRLQFLLPLLPIIHVDRDISSRNMRHSLAPVLLGLLGTRVVQEAMD-P 727
PPS +ALQ S+W+RLQ LL LLPII+ DRD S+RNMRH L VLL LLG+RVV E D P
Sbjct: 1984 PPSPSALQASMWLRLQLLLRLLPIIYADRDPSNRNMRHILTSVLLRLLGSRVVHEDSDLP 2043
Query: 728 F 730
F
Sbjct: 2044 F 2044
Score = 72.0 bits (175), Expect(3) = 1e-32
Identities = 42/96 (43%), Positives = 55/96 (57%)
Frame = +3
Query: 150 RKKSEAGSPEEGGVIDESFDCNRIGRPLAFPINDAEKDVFYQK*YFAIEKCLADLVLPCL 329
+++ EA S EEG V+D+ D + G+ E D F F EK LADLVLPCL
Sbjct: 1852 KRRLEATSLEEGEVVDDGLDTKKTGKQA---FQGLEMDGFNSGQQFVTEKALADLVLPCL 1908
Query: 330 ARSFPEICNSFVIALVKQMSELEQHISRATRSSGKQ 437
RS + N+F L+KQ++ +EQ IS TR SGKQ
Sbjct: 1909 DRSSNDSRNTFASDLIKQLNNIEQQISLFTRVSGKQ 1944
Score = 37.0 bits (84), Expect(3) = 1e-32
Identities = 20/47 (42%), Positives = 26/47 (55%)
Frame = +2
Query: 8 DLLVGRKSLRQILKTLAHKRCLPTKIQHISPWA*AVSQNYCLAMDLD 148
++L+GRKSLR LK LA + L TK Q PW + S A + D
Sbjct: 1805 EVLLGRKSLRHKLKNLAQTKGLSTKTQSCKPWGWSTSMLDATAKEND 1851
>ref|XP_006445035.1| hypothetical protein CICLE_v10018441mg [Citrus clementina]
gi|567905096|ref|XP_006445036.1| hypothetical protein
CICLE_v10018441mg [Citrus clementina]
gi|567905098|ref|XP_006445037.1| hypothetical protein
CICLE_v10018441mg [Citrus clementina]
gi|568876055|ref|XP_006491101.1| PREDICTED: mediator of
RNA polymerase II transcription subunit 12-like isoform
X1 [Citrus sinensis] gi|568876057|ref|XP_006491102.1|
PREDICTED: mediator of RNA polymerase II transcription
subunit 12-like isoform X2 [Citrus sinensis]
gi|557547297|gb|ESR58275.1| hypothetical protein
CICLE_v10018441mg [Citrus clementina]
gi|557547298|gb|ESR58276.1| hypothetical protein
CICLE_v10018441mg [Citrus clementina]
gi|557547299|gb|ESR58277.1| hypothetical protein
CICLE_v10018441mg [Citrus clementina]
Length = 2277
Score = 68.6 bits (166), Expect(3) = 2e-25
Identities = 36/63 (57%), Positives = 46/63 (73%)
Frame = +2
Query: 536 TLNTEPPSAAALQTSLWMRLQFLLPLLPIIHVDRDISSRNMRHSLAPVLLGLLGTRVVQE 715
T + PPS AAL+ S+ +RLQFLL LLP+I+ D + S RNMR+ LA V+L LLG+RVV E
Sbjct: 1983 TADPAPPSPAALRASMSLRLQFLLRLLPLIYTDGEPSGRNMRYLLASVILRLLGSRVVHE 2042
Query: 716 AMD 724
D
Sbjct: 2043 DAD 2045
Score = 61.2 bits (147), Expect(3) = 2e-25
Identities = 37/95 (38%), Positives = 55/95 (57%)
Frame = +3
Query: 150 RKKSEAGSPEEGGVIDESFDCNRIGRPLAFPINDAEKDVFYQK*YFAIEKCLADLVLPCL 329
+KK EA S EEG V++E D R G+ + P+ DAE Q+ E+ +LVLPC+
Sbjct: 1856 KKKLEATSLEEGEVVEEGIDSKRHGKG-SNPLFDAEGTSIGQQ--HVTERAFIELVLPCI 1912
Query: 330 ARSFPEICNSFVIALVKQMSELEQHISRATRSSGK 434
+S + N+F L+KQ++ +EQ IS TR + K
Sbjct: 1913 DQSSDDSRNTFANDLIKQLNNIEQQISAVTRGANK 1947
Score = 33.5 bits (75), Expect(3) = 2e-25
Identities = 15/33 (45%), Positives = 21/33 (63%)
Frame = +2
Query: 5 NDLLVGRKSLRQILKTLAHKRCLPTKIQHISPW 103
+D+L GRK++RQ L +A + L TK Q PW
Sbjct: 1808 HDVLFGRKTIRQRLVNIAESKGLSTKAQFWKPW 1840
>ref|XP_006445033.1| hypothetical protein CICLE_v10018441mg [Citrus clementina]
gi|567905092|ref|XP_006445034.1| hypothetical protein
CICLE_v10018441mg [Citrus clementina]
gi|567905100|ref|XP_006445038.1| hypothetical protein
CICLE_v10018441mg [Citrus clementina]
gi|568876059|ref|XP_006491103.1| PREDICTED: mediator of
RNA polymerase II transcription subunit 12-like isoform
X3 [Citrus sinensis] gi|557547295|gb|ESR58273.1|
hypothetical protein CICLE_v10018441mg [Citrus
clementina] gi|557547296|gb|ESR58274.1| hypothetical
protein CICLE_v10018441mg [Citrus clementina]
gi|557547300|gb|ESR58278.1| hypothetical protein
CICLE_v10018441mg [Citrus clementina]
Length = 2239
Score = 68.6 bits (166), Expect(3) = 2e-25
Identities = 36/63 (57%), Positives = 46/63 (73%)
Frame = +2
Query: 536 TLNTEPPSAAALQTSLWMRLQFLLPLLPIIHVDRDISSRNMRHSLAPVLLGLLGTRVVQE 715
T + PPS AAL+ S+ +RLQFLL LLP+I+ D + S RNMR+ LA V+L LLG+RVV E
Sbjct: 1945 TADPAPPSPAALRASMSLRLQFLLRLLPLIYTDGEPSGRNMRYLLASVILRLLGSRVVHE 2004
Query: 716 AMD 724
D
Sbjct: 2005 DAD 2007
Score = 61.2 bits (147), Expect(3) = 2e-25
Identities = 37/95 (38%), Positives = 55/95 (57%)
Frame = +3
Query: 150 RKKSEAGSPEEGGVIDESFDCNRIGRPLAFPINDAEKDVFYQK*YFAIEKCLADLVLPCL 329
+KK EA S EEG V++E D R G+ + P+ DAE Q+ E+ +LVLPC+
Sbjct: 1818 KKKLEATSLEEGEVVEEGIDSKRHGKG-SNPLFDAEGTSIGQQ--HVTERAFIELVLPCI 1874
Query: 330 ARSFPEICNSFVIALVKQMSELEQHISRATRSSGK 434
+S + N+F L+KQ++ +EQ IS TR + K
Sbjct: 1875 DQSSDDSRNTFANDLIKQLNNIEQQISAVTRGANK 1909
Score = 33.5 bits (75), Expect(3) = 2e-25
Identities = 15/33 (45%), Positives = 21/33 (63%)
Frame = +2
Query: 5 NDLLVGRKSLRQILKTLAHKRCLPTKIQHISPW 103
+D+L GRK++RQ L +A + L TK Q PW
Sbjct: 1770 HDVLFGRKTIRQRLVNIAESKGLSTKAQFWKPW 1802
>ref|XP_004306783.1| PREDICTED: mediator of RNA polymerase II transcription subunit
12-like [Fragaria vesca subsp. vesca]
Length = 2261
Score = 70.5 bits (171), Expect(3) = 8e-25
Identities = 37/69 (53%), Positives = 50/69 (72%)
Frame = +2
Query: 542 NTEPPSAAALQTSLWMRLQFLLPLLPIIHVDRDISSRNMRHSLAPVLLGLLGTRVVQEAM 721
++ PPS AAL+ S+ +RLQ LL LLPII+ DR+ S+RNMRH LA V+L LLG RVV E
Sbjct: 1972 DSAPPSPAALRASMSLRLQLLLRLLPIIYADREPSARNMRHGLALVVLRLLGNRVVHEYQ 2031
Query: 722 DPFITHTEN 748
+T +++
Sbjct: 2032 STPLTPSQS 2040
Score = 58.9 bits (141), Expect(3) = 8e-25
Identities = 36/96 (37%), Positives = 55/96 (57%)
Frame = +3
Query: 150 RKKSEAGSPEEGGVIDESFDCNRIGRPLAFPINDAEKDVFYQK*YFAIEKCLADLVLPCL 329
+KK E S EEG +++E + R G+ + PI D E Q+ E+ L +L+LPC+
Sbjct: 1843 KKKFEVTSLEEGEMVEEGTESKRHGKGSS-PIFDNEGQSVSQQ--HVTERALIELLLPCI 1899
Query: 330 ARSFPEICNSFVIALVKQMSELEQHISRATRSSGKQ 437
+S + N+F L+KQ+S +EQ IS TR + KQ
Sbjct: 1900 DQSSDDSRNTFANDLIKQLSNIEQQISTVTRGTSKQ 1935
Score = 31.6 bits (70), Expect(3) = 8e-25
Identities = 14/32 (43%), Positives = 19/32 (59%)
Frame = +2
Query: 8 DLLVGRKSLRQILKTLAHKRCLPTKIQHISPW 103
D+L GRK++RQ L +A + L TK PW
Sbjct: 1796 DVLFGRKTIRQRLMNIAESKGLSTKTHFWKPW 1827
>ref|XP_006339570.1| PREDICTED: mediator of RNA polymerase II transcription subunit
12-like isoform X1 [Solanum tuberosum]
gi|565344967|ref|XP_006339571.1| PREDICTED: mediator of
RNA polymerase II transcription subunit 12-like isoform
X2 [Solanum tuberosum]
Length = 2262
Score = 67.8 bits (164), Expect(3) = 1e-24
Identities = 35/57 (61%), Positives = 43/57 (75%)
Frame = +2
Query: 545 TEPPSAAALQTSLWMRLQFLLPLLPIIHVDRDISSRNMRHSLAPVLLGLLGTRVVQE 715
T PPS AAL+ SL +RLQF+L L II+ DR+ S RNMRH LA V+L +LG+RVV E
Sbjct: 1971 TMPPSPAALRASLSLRLQFILRLFSIIYADREPSGRNMRHVLASVILRILGSRVVHE 2027
Score = 54.7 bits (130), Expect(3) = 1e-24
Identities = 33/93 (35%), Positives = 52/93 (55%)
Frame = +3
Query: 156 KSEAGSPEEGGVIDESFDCNRIGRPLAFPINDAEKDVFYQK*YFAIEKCLADLVLPCLAR 335
KSE S EEG V+DE G L P+ + + V +K + E+ L DL+LPCL +
Sbjct: 1849 KSEVSSIEEGEVVDE-------GTTLKRPVKGSGRTVDVEKLHVT-ERALVDLILPCLDQ 1900
Query: 336 SFPEICNSFVIALVKQMSELEQHISRATRSSGK 434
+ + ++F ++KQM+ +EQ I+ TR + K
Sbjct: 1901 ASDDSRSTFASDMIKQMNLIEQQINAVTREASK 1933
Score = 37.7 bits (86), Expect(3) = 1e-24
Identities = 17/33 (51%), Positives = 23/33 (69%)
Frame = +2
Query: 5 NDLLVGRKSLRQILKTLAHKRCLPTKIQHISPW 103
ND+L+GRKS+RQ L +A R L T+ Q+ PW
Sbjct: 1799 NDVLLGRKSVRQRLNNIAVSRGLSTRAQYWKPW 1831
>ref|XP_004229878.1| PREDICTED: mediator of RNA polymerase II transcription subunit
12-like [Solanum lycopersicum]
Length = 2262
Score = 66.2 bits (160), Expect(3) = 5e-24
Identities = 34/57 (59%), Positives = 42/57 (73%)
Frame = +2
Query: 545 TEPPSAAALQTSLWMRLQFLLPLLPIIHVDRDISSRNMRHSLAPVLLGLLGTRVVQE 715
T PPS AL+ SL +RLQF+L L II+ DR+ S RNMRH LA V+L +LG+RVV E
Sbjct: 1971 TVPPSPGALRASLSLRLQFILRLFSIIYADREPSGRNMRHVLASVILRILGSRVVHE 2027
Score = 54.7 bits (130), Expect(3) = 5e-24
Identities = 33/93 (35%), Positives = 52/93 (55%)
Frame = +3
Query: 156 KSEAGSPEEGGVIDESFDCNRIGRPLAFPINDAEKDVFYQK*YFAIEKCLADLVLPCLAR 335
KSE S EEG V+DE G L P+ + + V +K + E+ L DL+LPCL +
Sbjct: 1849 KSEVSSIEEGEVVDE-------GTTLKRPVKGSGRTVDVEKLHVT-ERALVDLILPCLDQ 1900
Query: 336 SFPEICNSFVIALVKQMSELEQHISRATRSSGK 434
+ + ++F ++KQM+ +EQ I+ TR + K
Sbjct: 1901 ASDDSRSTFASDMIKQMNLIEQQINAVTREASK 1933
Score = 37.4 bits (85), Expect(3) = 5e-24
Identities = 17/33 (51%), Positives = 23/33 (69%)
Frame = +2
Query: 5 NDLLVGRKSLRQILKTLAHKRCLPTKIQHISPW 103
ND+L+GRKS+RQ L +A R L T+ Q+ PW
Sbjct: 1799 NDVLLGRKSVRQRLHNIAVSRGLSTRAQYWKPW 1831
>gb|EMJ21769.1| hypothetical protein PRUPE_ppa000036mg [Prunus persica]
Length = 2210
Score = 65.1 bits (157), Expect(3) = 2e-23
Identities = 35/58 (60%), Positives = 42/58 (72%)
Frame = +2
Query: 542 NTEPPSAAALQTSLWMRLQFLLPLLPIIHVDRDISSRNMRHSLAPVLLGLLGTRVVQE 715
++ PPS AAL+ S+ +RLQ LL LLPII DR+ S RNMR LA V+L LLG RVV E
Sbjct: 1921 DSAPPSPAALRASMSLRLQLLLRLLPIICADREPSGRNMRQGLASVVLRLLGNRVVNE 1978
Score = 58.2 bits (139), Expect(3) = 2e-23
Identities = 36/97 (37%), Positives = 55/97 (56%), Gaps = 1/97 (1%)
Frame = +3
Query: 150 RKKSEAGSPEEGGVIDESFDCNRIGRPLAFPINDAEK-DVFYQK*YFAIEKCLADLVLPC 326
+KK E S EEG +++E D + G+ L P D E +V Q+ E+ L +L+LPC
Sbjct: 1792 KKKFEVTSLEEGEMVEEGIDSKKYGKGLT-PTYDIESYNVTQQR---VTERALIELLLPC 1847
Query: 327 LARSFPEICNSFVIALVKQMSELEQHISRATRSSGKQ 437
+ +S + N+F L+KQ+S +E IS TR + KQ
Sbjct: 1848 IDQSSDDSRNTFANDLIKQLSNIEVQISAVTRGTNKQ 1884
Score = 33.1 bits (74), Expect(3) = 2e-23
Identities = 15/33 (45%), Positives = 21/33 (63%)
Frame = +2
Query: 5 NDLLVGRKSLRQILKTLAHKRCLPTKIQHISPW 103
+D+L GRK++RQ L +A + L TK Q PW
Sbjct: 1744 SDVLFGRKTIRQRLLNIAETKGLSTKTQFWKPW 1776
>ref|XP_002274479.2| PREDICTED: uncharacterized protein LOC100263628 [Vitis vinifera]
Length = 2272
Score = 63.9 bits (154), Expect(3) = 3e-23
Identities = 37/69 (53%), Positives = 49/69 (71%)
Frame = +2
Query: 542 NTEPPSAAALQTSLWMRLQFLLPLLPIIHVDRDISSRNMRHSLAPVLLGLLGTRVVQEAM 721
++ PPS AAL+ S+ +RLQFLL LLPII + + SRNMR SLA V+L LLG+RVV E
Sbjct: 1985 DSAPPSPAALRASMALRLQFLLRLLPIICAEGE-QSRNMRQSLASVILRLLGSRVVHEDA 2043
Query: 722 DPFITHTEN 748
D + T++
Sbjct: 2044 DLSLYSTQS 2052
Score = 56.2 bits (134), Expect(3) = 3e-23
Identities = 35/96 (36%), Positives = 51/96 (53%)
Frame = +3
Query: 150 RKKSEAGSPEEGGVIDESFDCNRIGRPLAFPINDAEKDVFYQK*YFAIEKCLADLVLPCL 329
+KK E S EEG V++E D R + ++ D F A E+ L +LVLPC+
Sbjct: 1856 KKKFEVTSLEEGEVVEEGTDSKRYAKGST---QMSDFDGFNVSQQHATERALVELVLPCI 1912
Query: 330 ARSFPEICNSFVIALVKQMSELEQHISRATRSSGKQ 437
+S + N+F L+KQM +EQ I+ TR + KQ
Sbjct: 1913 DQSSDDSRNAFASDLIKQMHIIEQQINTVTRGTTKQ 1948
Score = 35.4 bits (80), Expect(3) = 3e-23
Identities = 16/32 (50%), Positives = 21/32 (65%)
Frame = +2
Query: 8 DLLVGRKSLRQILKTLAHKRCLPTKIQHISPW 103
D+L GRKS+RQ L +A + L TK+Q PW
Sbjct: 1809 DVLFGRKSIRQRLINIAESKGLSTKVQFWKPW 1840
>emb|CBI40380.3| unnamed protein product [Vitis vinifera]
Length = 2037
Score = 63.9 bits (154), Expect(3) = 3e-23
Identities = 37/69 (53%), Positives = 49/69 (71%)
Frame = +2
Query: 542 NTEPPSAAALQTSLWMRLQFLLPLLPIIHVDRDISSRNMRHSLAPVLLGLLGTRVVQEAM 721
++ PPS AAL+ S+ +RLQFLL LLPII + + SRNMR SLA V+L LLG+RVV E
Sbjct: 1750 DSAPPSPAALRASMALRLQFLLRLLPIICAEGE-QSRNMRQSLASVILRLLGSRVVHEDA 1808
Query: 722 DPFITHTEN 748
D + T++
Sbjct: 1809 DLSLYSTQS 1817
Score = 56.2 bits (134), Expect(3) = 3e-23
Identities = 35/96 (36%), Positives = 51/96 (53%)
Frame = +3
Query: 150 RKKSEAGSPEEGGVIDESFDCNRIGRPLAFPINDAEKDVFYQK*YFAIEKCLADLVLPCL 329
+KK E S EEG V++E D R + ++ D F A E+ L +LVLPC+
Sbjct: 1621 KKKFEVTSLEEGEVVEEGTDSKRYAKGST---QMSDFDGFNVSQQHATERALVELVLPCI 1677
Query: 330 ARSFPEICNSFVIALVKQMSELEQHISRATRSSGKQ 437
+S + N+F L+KQM +EQ I+ TR + KQ
Sbjct: 1678 DQSSDDSRNAFASDLIKQMHIIEQQINTVTRGTTKQ 1713
Score = 35.4 bits (80), Expect(3) = 3e-23
Identities = 16/32 (50%), Positives = 21/32 (65%)
Frame = +2
Query: 8 DLLVGRKSLRQILKTLAHKRCLPTKIQHISPW 103
D+L GRKS+RQ L +A + L TK+Q PW
Sbjct: 1574 DVLFGRKSIRQRLINIAESKGLSTKVQFWKPW 1605
>ref|XP_002302587.2| CRYPTIC PRECOCIOUS family protein [Populus trichocarpa]
gi|550345126|gb|EEE81860.2| CRYPTIC PRECOCIOUS family
protein [Populus trichocarpa]
Length = 2219
Score = 62.8 bits (151), Expect(3) = 2e-22
Identities = 34/96 (35%), Positives = 57/96 (59%)
Frame = +3
Query: 150 RKKSEAGSPEEGGVIDESFDCNRIGRPLAFPINDAEKDVFYQK*YFAIEKCLADLVLPCL 329
+KK E S EEG V++E + R G+ +FP+ ++E +Q+ E+ L +LVLPC+
Sbjct: 1796 KKKFEVPSLEEGEVVEEGTETKRSGKG-SFPVFESEGSSLFQQ--NVTERALVELVLPCI 1852
Query: 330 ARSFPEICNSFVIALVKQMSELEQHISRATRSSGKQ 437
+ + N+F L+KQ++ +EQ I+ TR + KQ
Sbjct: 1853 DQGSDDSRNTFATDLIKQLNNIEQQINSVTRGTSKQ 1888
Score = 58.9 bits (141), Expect(3) = 2e-22
Identities = 32/54 (59%), Positives = 39/54 (72%)
Frame = +2
Query: 554 PSAAALQTSLWMRLQFLLPLLPIIHVDRDISSRNMRHSLAPVLLGLLGTRVVQE 715
PS AAL+ S+ +RLQ LL LLP I + + S RNMRH LA V+L LLG+RVV E
Sbjct: 1929 PSPAALRASMLLRLQLLLRLLPTICTNGEPSGRNMRHVLASVILRLLGSRVVHE 1982
Score = 31.2 bits (69), Expect(3) = 2e-22
Identities = 14/33 (42%), Positives = 20/33 (60%)
Frame = +2
Query: 5 NDLLVGRKSLRQILKTLAHKRCLPTKIQHISPW 103
+D+L GRK++RQ L +A + L TK PW
Sbjct: 1748 HDVLFGRKTIRQRLINIAESKGLSTKAHFWKPW 1780
>ref|XP_004986068.1| PREDICTED: mediator of RNA polymerase II transcription subunit
12-like [Setaria italica]
Length = 2203
Score = 67.0 bits (162), Expect(3) = 3e-22
Identities = 34/73 (46%), Positives = 49/73 (67%)
Frame = +2
Query: 551 PPSAAALQTSLWMRLQFLLPLLPIIHVDRDISSRNMRHSLAPVLLGLLGTRVVQEAMDPF 730
PPSA+AL+ +LW+RLQF++ LLP+I D R+MRH+LA +LGLL TR++ E D
Sbjct: 1924 PPSASALRAALWLRLQFIIRLLPVIMAD-----RSMRHTLASAILGLLATRMIYEDADLP 1978
Query: 731 ITHTENICLHEKI 769
+ T I L ++
Sbjct: 1979 LPPTNAIALRREV 1991
Score = 54.7 bits (130), Expect(3) = 3e-22
Identities = 33/96 (34%), Positives = 51/96 (53%)
Frame = +3
Query: 150 RKKSEAGSPEEGGVIDESFDCNRIGRPLAFPINDAEKDVFYQK*YFAIEKCLADLVLPCL 329
++K E S EEG V+D++ D R + + ++ + + + Y EK LA+LVLPC+
Sbjct: 1790 KRKLEVTSIEEGEVVDDTVDAKRPVKTPSHSVDRSFEGIRSINKYLT-EKALAELVLPCI 1848
Query: 330 ARSFPEICNSFVIALVKQMSELEQHISRATRSSGKQ 437
RS +I L+KQM + HI TR+ KQ
Sbjct: 1849 DRSSADIRGILSGDLIKQMGTISDHIKAVTRNGAKQ 1884
Score = 30.4 bits (67), Expect(3) = 3e-22
Identities = 14/32 (43%), Positives = 20/32 (62%)
Frame = +2
Query: 8 DLLVGRKSLRQILKTLAHKRCLPTKIQHISPW 103
D ++GR+S RQ L +A ++ L TK Q PW
Sbjct: 1743 DAILGRRSTRQQLVHIAQRKGLSTKAQVWKPW 1774
>ref|XP_004155825.1| PREDICTED: mediator of RNA polymerase II transcription subunit
12-like [Cucumis sativus]
Length = 2254
Score = 62.8 bits (151), Expect(3) = 1e-21
Identities = 33/72 (45%), Positives = 48/72 (66%)
Frame = +2
Query: 554 PSAAALQTSLWMRLQFLLPLLPIIHVDRDISSRNMRHSLAPVLLGLLGTRVVQEAMDPFI 733
PS AAL+ S+ +RLQ +L LLP+I DR+ S RNMRH LA V+L LLG R+V E +
Sbjct: 1965 PSPAALRASMSLRLQLILRLLPVILEDREPSGRNMRHMLASVILRLLGNRMVHEDANLTF 2024
Query: 734 THTENICLHEKI 769
T ++ + +++
Sbjct: 2025 CPTHSLMVKKEV 2036
Score = 53.9 bits (128), Expect(3) = 1e-21
Identities = 32/100 (32%), Positives = 53/100 (53%)
Frame = +3
Query: 138 WT*IRKKSEAGSPEEGGVIDESFDCNRIGRPLAFPINDAEKDVFYQK*YFAIEKCLADLV 317
W+ S+ EEG V++E D + + + P+ D E V + + E+ L +LV
Sbjct: 1829 WSWCTSGSDTSYLEEGEVVEEGTDSRKYNQK-SVPMLDNE--VLHSGQQYVTERALIELV 1885
Query: 318 LPCLARSFPEICNSFVIALVKQMSELEQHISRATRSSGKQ 437
LPC+ +S E N+F L+KQ++ +EQ I+ T + KQ
Sbjct: 1886 LPCIDQSSEESRNTFANDLIKQLNNIEQQINAVTSGTSKQ 1925
Score = 33.1 bits (74), Expect(3) = 1e-21
Identities = 15/33 (45%), Positives = 20/33 (60%)
Frame = +2
Query: 8 DLLVGRKSLRQILKTLAHKRCLPTKIQHISPWA 106
D+L GRKS+RQ L +A + L TK PW+
Sbjct: 1798 DVLFGRKSIRQRLTNIAESKGLSTKTMFWKPWS 1830
>ref|XP_004510784.1| PREDICTED: mediator of RNA polymerase II transcription subunit
12-like [Cicer arietinum]
Length = 2223
Score = 66.2 bits (160), Expect(3) = 2e-21
Identities = 33/58 (56%), Positives = 43/58 (74%)
Frame = +2
Query: 542 NTEPPSAAALQTSLWMRLQFLLPLLPIIHVDRDISSRNMRHSLAPVLLGLLGTRVVQE 715
++ PPS AAL+ S+ +RLQ L+ PI+ DR+ S RNMRH LAPV+L LLG+RVV E
Sbjct: 1942 DSSPPSPAALRVSMSLRLQLLMRFFPILCADREPSVRNMRHFLAPVILRLLGSRVVHE 1999
Score = 49.3 bits (116), Expect(3) = 2e-21
Identities = 35/94 (37%), Positives = 51/94 (54%), Gaps = 1/94 (1%)
Frame = +3
Query: 150 RKKSEAGSPEEGGV-IDESFDCNRIGRPLAFPINDAEKDVFYQK*YFAIEKCLADLVLPC 326
+KK + S EEG V +DE D R + L+ + D+E Q+ EK L +L+LPC
Sbjct: 1813 KKKFDITSLEEGEVAVDEGIDLKRSLKGLS-QVFDSESSRINQQ--HVTEKALIELLLPC 1869
Query: 327 LARSFPEICNSFVIALVKQMSELEQHISRATRSS 428
+ +S E N+F L+KQ+S +E IS T S
Sbjct: 1870 MDQSSEESRNTFANCLMKQLSNIELQISAVTGGS 1903
Score = 33.9 bits (76), Expect(3) = 2e-21
Identities = 15/32 (46%), Positives = 20/32 (62%)
Frame = +2
Query: 8 DLLVGRKSLRQILKTLAHKRCLPTKIQHISPW 103
D+L GRK++RQ L +A R L K Q+ PW
Sbjct: 1766 DVLFGRKTIRQRLHNIAESRGLSVKTQYWEPW 1797
>gb|EEE67704.1| hypothetical protein OsJ_25372 [Oryza sativa Japonica Group]
Length = 2270
Score = 62.0 bits (149), Expect(3) = 2e-21
Identities = 31/73 (42%), Positives = 46/73 (63%)
Frame = +2
Query: 551 PPSAAALQTSLWMRLQFLLPLLPIIHVDRDISSRNMRHSLAPVLLGLLGTRVVQEAMDPF 730
PPSA+AL+ ++W+RLQF++ LLP+I D R+MRH+LA +LGLL R++ E D
Sbjct: 1991 PPSASALRATVWLRLQFIIRLLPLIMAD-----RSMRHTLASAILGLLSARIIYEDADLP 2045
Query: 731 ITHTENICLHEKI 769
+ T L +
Sbjct: 2046 LPPTNTTVLRRDV 2058
Score = 54.7 bits (130), Expect(3) = 2e-21
Identities = 36/105 (34%), Positives = 56/105 (53%)
Frame = +3
Query: 123 IIVSQWT*IRKKSEAGSPEEGGVIDESFDCNRIGRPLAFPINDAEKDVFYQK*YFAIEKC 302
+I S+ T ++K E S EEG V+D+S D R + ++ + + + Y EK
Sbjct: 1850 VIASKST--KRKLEVTSIEEGEVVDDSADAKRPSKANPHNVDRSFEGIRSINKYLT-EKA 1906
Query: 303 LADLVLPCLARSFPEICNSFVIALVKQMSELEQHISRATRSSGKQ 437
L++L+LPC+ RS E + F LVKQM + +HI R+ KQ
Sbjct: 1907 LSELMLPCIDRSSAEFRSIFAGDLVKQMGTISEHIKAIARNGTKQ 1951
Score = 32.3 bits (72), Expect(3) = 2e-21
Identities = 16/32 (50%), Positives = 20/32 (62%)
Frame = +2
Query: 8 DLLVGRKSLRQILKTLAHKRCLPTKIQHISPW 103
D L+GRKS RQ L +A ++ L TK Q PW
Sbjct: 1810 DALLGRKSTRQQLVHIAQRKGLSTKTQVWKPW 1841
>ref|XP_002466024.1| hypothetical protein SORBIDRAFT_01g050280 [Sorghum bicolor]
gi|241919878|gb|EER93022.1| hypothetical protein
SORBIDRAFT_01g050280 [Sorghum bicolor]
Length = 2201
Score = 61.2 bits (147), Expect(3) = 2e-21
Identities = 30/58 (51%), Positives = 42/58 (72%)
Frame = +2
Query: 551 PPSAAALQTSLWMRLQFLLPLLPIIHVDRDISSRNMRHSLAPVLLGLLGTRVVQEAMD 724
PPSA+AL+ +LW+RLQF++ LLP+I D R+MR +LA +LGLL TR++ E D
Sbjct: 1923 PPSASALRAALWLRLQFIIRLLPVIMAD-----RSMRQTLASAILGLLATRMIYEDAD 1975
Score = 57.4 bits (137), Expect(3) = 2e-21
Identities = 34/98 (34%), Positives = 52/98 (53%), Gaps = 2/98 (2%)
Frame = +3
Query: 150 RKKSEAGSPEEGGVIDESFDCNRIGRPLAFPINDAEK--DVFYQK*YFAIEKCLADLVLP 323
++K E S EEG V+D++ D R P P ++ ++ D + EK LA+LVLP
Sbjct: 1789 KRKLEVTSIEEGEVVDDTVDAKR---PSKTPPHNVDRSFDAIRSINKYLTEKALAELVLP 1845
Query: 324 CLARSFPEICNSFVIALVKQMSELEQHISRATRSSGKQ 437
C+ RS +I + L+KQM + +HI R+ KQ
Sbjct: 1846 CIDRSSADIRGILSVDLIKQMGAISEHIKAIARNGAKQ 1883
Score = 30.4 bits (67), Expect(3) = 2e-21
Identities = 14/32 (43%), Positives = 20/32 (62%)
Frame = +2
Query: 8 DLLVGRKSLRQILKTLAHKRCLPTKIQHISPW 103
D ++GR+S RQ L +A ++ L TK Q PW
Sbjct: 1742 DAILGRRSTRQQLVHIAQRKGLSTKAQVWKPW 1773
>gb|EEC82567.1| hypothetical protein OsI_27117 [Oryza sativa Indica Group]
Length = 2094
Score = 62.0 bits (149), Expect(3) = 2e-21
Identities = 31/73 (42%), Positives = 46/73 (63%)
Frame = +2
Query: 551 PPSAAALQTSLWMRLQFLLPLLPIIHVDRDISSRNMRHSLAPVLLGLLGTRVVQEAMDPF 730
PPSA+AL+ ++W+RLQF++ LLP+I D R+MRH+LA +LGLL R++ E D
Sbjct: 1811 PPSASALRATVWLRLQFIIRLLPLIMAD-----RSMRHTLASAILGLLSARIIYEDADLP 1865
Query: 731 ITHTENICLHEKI 769
+ T L +
Sbjct: 1866 LPPTNTTVLRRDV 1878
Score = 54.7 bits (130), Expect(3) = 2e-21
Identities = 36/105 (34%), Positives = 56/105 (53%)
Frame = +3
Query: 123 IIVSQWT*IRKKSEAGSPEEGGVIDESFDCNRIGRPLAFPINDAEKDVFYQK*YFAIEKC 302
+I S+ T ++K E S EEG V+D+S D R + ++ + + + Y EK
Sbjct: 1670 VIASKST--KRKLEVTSIEEGEVVDDSADAKRPSKANPHNVDRSFEGIRSINKYLT-EKA 1726
Query: 303 LADLVLPCLARSFPEICNSFVIALVKQMSELEQHISRATRSSGKQ 437
L++L+LPC+ RS E + F LVKQM + +HI R+ KQ
Sbjct: 1727 LSELMLPCIDRSSAEFRSIFAGDLVKQMGTISEHIKAIARNGTKQ 1771
Score = 32.3 bits (72), Expect(3) = 2e-21
Identities = 16/32 (50%), Positives = 20/32 (62%)
Frame = +2
Query: 8 DLLVGRKSLRQILKTLAHKRCLPTKIQHISPW 103
D L+GRKS RQ L +A ++ L TK Q PW
Sbjct: 1630 DALLGRKSTRQQLVHIAQRKGLSTKTQVWKPW 1661
>ref|XP_004133865.1| PREDICTED: mediator of RNA polymerase II transcription subunit
12-like [Cucumis sativus]
Length = 2254
Score = 62.8 bits (151), Expect(3) = 4e-21
Identities = 33/72 (45%), Positives = 48/72 (66%)
Frame = +2
Query: 554 PSAAALQTSLWMRLQFLLPLLPIIHVDRDISSRNMRHSLAPVLLGLLGTRVVQEAMDPFI 733
PS AAL+ S+ +RLQ +L LLP+I DR+ S RNMRH LA V+L LLG R+V E +
Sbjct: 1965 PSPAALRASMSLRLQLILRLLPVILEDREPSGRNMRHMLASVILRLLGNRMVHEDANLTF 2024
Query: 734 THTENICLHEKI 769
T ++ + +++
Sbjct: 2025 CPTHSLMVKKEV 2036
Score = 52.8 bits (125), Expect(3) = 4e-21
Identities = 32/100 (32%), Positives = 52/100 (52%)
Frame = +3
Query: 138 WT*IRKKSEAGSPEEGGVIDESFDCNRIGRPLAFPINDAEKDVFYQK*YFAIEKCLADLV 317
W S+ EEG V++E D + + + P+ D E V + + E+ L +LV
Sbjct: 1829 WGWCTSGSDTSYLEEGEVVEEGTDSRKYNQK-SVPMLDNE--VLHSGQQYVTERALIELV 1885
Query: 318 LPCLARSFPEICNSFVIALVKQMSELEQHISRATRSSGKQ 437
LPC+ +S E N+F L+KQ++ +EQ I+ T + KQ
Sbjct: 1886 LPCIDQSSEESRNTFANDLIKQLNNIEQQINAVTSGTSKQ 1925
Score = 32.7 bits (73), Expect(3) = 4e-21
Identities = 15/32 (46%), Positives = 19/32 (59%)
Frame = +2
Query: 8 DLLVGRKSLRQILKTLAHKRCLPTKIQHISPW 103
D+L GRKS+RQ L +A + L TK PW
Sbjct: 1798 DVLFGRKSIRQRLTNIAESKGLSTKTMFWKPW 1829
>gb|EMS47933.1| Putative mediator of RNA polymerase II transcription subunit 12
[Triticum urartu]
Length = 2115
Score = 59.3 bits (142), Expect(3) = 5e-21
Identities = 28/58 (48%), Positives = 40/58 (68%)
Frame = +2
Query: 551 PPSAAALQTSLWMRLQFLLPLLPIIHVDRDISSRNMRHSLAPVLLGLLGTRVVQEAMD 724
PPSA+ALQ +W+RLQF++ LL +I ++ R MRH+LAP +L LL R++ E D
Sbjct: 1836 PPSASALQAIVWLRLQFIIRLLQVI-----LADRGMRHTLAPAILSLLAARIIYEDAD 1888
Score = 54.7 bits (130), Expect(3) = 5e-21
Identities = 29/95 (30%), Positives = 49/95 (51%)
Frame = +3
Query: 150 RKKSEAGSPEEGGVIDESFDCNRIGRPLAFPINDAEKDVFYQK*YFAIEKCLADLVLPCL 329
++K EA EEG V+D+ D R + ++ + + + + EK A+ +LPC+
Sbjct: 1701 KRKLEAAPIEEGEVVDDPADAKRPSKSTPNNVDRSVEAIRSNINKYVTEKAFAEFMLPCI 1760
Query: 330 ARSFPEICNSFVIALVKQMSELEQHISRATRSSGK 434
RS PE + F L+KQM + +HI +R+ K
Sbjct: 1761 DRSSPEFRSIFAGELIKQMGTVSEHIKAISRNGAK 1795
Score = 33.9 bits (76), Expect(3) = 5e-21
Identities = 16/32 (50%), Positives = 21/32 (65%)
Frame = +2
Query: 8 DLLVGRKSLRQILKTLAHKRCLPTKIQHISPW 103
D ++GRKS RQ L T+A +R +P K Q PW
Sbjct: 1654 DAVLGRKSTRQQLLTIATRRGVPIKAQVWKPW 1685
>ref|XP_002320796.2| hypothetical protein POPTR_0014s080202g, partial [Populus
trichocarpa] gi|550323753|gb|EEE99111.2| hypothetical
protein POPTR_0014s080202g, partial [Populus
trichocarpa]
Length = 1089
Score = 60.1 bits (144), Expect(3) = 5e-21
Identities = 34/96 (35%), Positives = 55/96 (57%)
Frame = +3
Query: 150 RKKSEAGSPEEGGVIDESFDCNRIGRPLAFPINDAEKDVFYQK*YFAIEKCLADLVLPCL 329
+KK E S EEG V++E + R G+ +FPI + E +Q+ E+ L +LVLPC+
Sbjct: 671 KKKFEVPSLEEGEVVEEGSETKRSGKG-SFPIFEYEGSSLFQQ--NVTERALVELVLPCI 727
Query: 330 ARSFPEICNSFVIALVKQMSELEQHISRATRSSGKQ 437
+ + N+F L+KQ++ +EQ I+ T + KQ
Sbjct: 728 DQGSDDSRNTFATDLIKQLNNIEQQINSVTHGTSKQ 763
Score = 58.5 bits (140), Expect(3) = 5e-21
Identities = 33/60 (55%), Positives = 41/60 (68%)
Frame = +2
Query: 536 TLNTEPPSAAALQTSLWMRLQFLLPLLPIIHVDRDISSRNMRHSLAPVLLGLLGTRVVQE 715
T ++ PS AAL+ S+ +RLQ LL LLP I D + S RNMR LA V+L LLG+RVV E
Sbjct: 798 TADSTLPSPAALRASMSLRLQLLLRLLPTICTDGEPSGRNMRQMLASVILRLLGSRVVHE 857
Score = 29.3 bits (64), Expect(3) = 5e-21
Identities = 13/33 (39%), Positives = 20/33 (60%)
Frame = +2
Query: 5 NDLLVGRKSLRQILKTLAHKRCLPTKIQHISPW 103
+++L GRK++RQ L +A + L TK PW
Sbjct: 623 HNVLFGRKTIRQRLINIAESKGLSTKAHFWKPW 655
>tpg|DAA42829.1| TPA: hypothetical protein ZEAMMB73_708082 [Zea mays]
Length = 2193
Score = 64.3 bits (155), Expect(3) = 9e-21
Identities = 31/58 (53%), Positives = 43/58 (74%)
Frame = +2
Query: 551 PPSAAALQTSLWMRLQFLLPLLPIIHVDRDISSRNMRHSLAPVLLGLLGTRVVQEAMD 724
PPSA+AL+ +LW+RLQF++ LLP+I D R+MRH+LA +LGLL TR++ E D
Sbjct: 1913 PPSASALRAALWLRLQFIIRLLPVIMAD-----RSMRHTLASAILGLLATRMIYEDAD 1965
Score = 52.4 bits (124), Expect(3) = 9e-21
Identities = 31/96 (32%), Positives = 49/96 (51%)
Frame = +3
Query: 150 RKKSEAGSPEEGGVIDESFDCNRIGRPLAFPINDAEKDVFYQK*YFAIEKCLADLVLPCL 329
++K E S EEG V+D++ D R + ++ + + + Y EK LA+LVLPC+
Sbjct: 1779 KRKLEVTSIEEGEVVDDTVDAKRTTKTPPHSVDRSFEGIRSINKYLT-EKALAELVLPCI 1837
Query: 330 ARSFPEICNSFVIALVKQMSELEQHISRATRSSGKQ 437
RS +I + L KQM + +HI + KQ
Sbjct: 1838 DRSSADIRGILSVDLTKQMGAISEHIKAIALNGAKQ 1873
Score = 30.4 bits (67), Expect(3) = 9e-21
Identities = 14/32 (43%), Positives = 20/32 (62%)
Frame = +2
Query: 8 DLLVGRKSLRQILKTLAHKRCLPTKIQHISPW 103
D ++GR+S RQ L +A ++ L TK Q PW
Sbjct: 1732 DAILGRRSTRQQLVHIAQRKGLSTKAQVWKPW 1763