BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra25_contig00024876
         (525 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EXB57308.1| Transcription initiation factor TFIID subunit 1-A...   108   1e-21
ref|XP_006366188.1| PREDICTED: transcription initiation factor T...   105   8e-21
ref|XP_006366187.1| PREDICTED: transcription initiation factor T...   105   8e-21
ref|XP_006366186.1| PREDICTED: transcription initiation factor T...   105   8e-21
ref|XP_002273712.2| PREDICTED: transcription initiation factor T...   105   8e-21
ref|XP_006842155.1| hypothetical protein AMTR_s00078p00132750 [A...   103   2e-20
ref|XP_004288581.1| PREDICTED: transcription initiation factor T...   100   3e-19
ref|XP_004242685.1| PREDICTED: transcription initiation factor T...    99   4e-19
ref|XP_006587644.1| PREDICTED: transcription initiation factor T...    98   1e-18
ref|XP_006587643.1| PREDICTED: transcription initiation factor T...    98   1e-18
ref|XP_006587642.1| PREDICTED: transcription initiation factor T...    98   1e-18
ref|XP_002323740.2| hypothetical protein POPTR_0017s07490g [Popu...    98   1e-18
gb|EMJ26687.1| hypothetical protein PRUPE_ppa000092mg [Prunus pe...    98   1e-18
ref|XP_006578383.1| PREDICTED: transcription initiation factor T...    96   6e-18
ref|XP_006578382.1| PREDICTED: transcription initiation factor T...    96   6e-18
ref|XP_006494604.1| PREDICTED: transcription initiation factor T...    95   1e-17
ref|XP_006420853.1| hypothetical protein CICLE_v100041253mg, par...    95   1e-17
gb|ESW30129.1| hypothetical protein PHAVU_002G127400g [Phaseolus...    93   4e-17
ref|XP_002309876.2| ubiquitin family protein [Populus trichocarp...    93   4e-17
sp|Q67W65.1|TAF1_ORYSJ RecName: Full=Transcription initiation fa...    92   5e-17

>gb|EXB57308.1| Transcription initiation factor TFIID subunit 1-A [Morus notabilis]
          Length = 1993

 Score =  108 bits (269), Expect = 1e-21
 Identities = 72/209 (34%), Positives = 101/209 (48%), Gaps = 45/209 (21%)
 Frame = -1

Query: 495  YPLDQYPWEEKIYWGDSSPDNFSKEDSEVENHDL-------------------------- 394
            YPLDQ  WE  I W +S     S E+ ++   DL                          
Sbjct: 428  YPLDQLDWEVGIVWDNSPVAENSVENCKIAGPDLEASVDSDTEPESGMQKLLLEPLPEAD 487

Query: 393  ----------SNIIVEPFGQSSAIESKQIKESDRALHPQMLRLYNR----QFTSNDADLE 256
                      S +I+E FG  ++     +  S+   HPQ+LRL +R     F  +D   +
Sbjct: 488  DKPQETFFHGSPVILEDFGSETSSRPSSLTFSEGRYHPQLLRLESRLEVDNFNQDDGRTD 547

Query: 255  KSKRLKARFRSYLK---KLSSQNCDLLNDSWTDNILWEQGSGISKEKIIFDLQDDRMLFE 85
            K    +    + ++   KL SQN D+L  SW D I+WEQ + + K K+IFDLQD++MLFE
Sbjct: 548  KVNEKQLHQTNAVRNFNKLISQNRDMLEGSWLDAIIWEQDTHVRKPKLIFDLQDEQMLFE 607

Query: 84   ILDDK--HNLYSHASAMLINSSVKAATGE 4
            ILDDK   NL  HA AM+I  SVK++ G+
Sbjct: 608  ILDDKDDKNLRLHAGAMVITRSVKSSYGD 636


>ref|XP_006366188.1| PREDICTED: transcription initiation factor TFIID subunit 1-like
           isoform X3 [Solanum tuberosum]
          Length = 1856

 Score =  105 bits (261), Expect = 8e-21
 Identities = 68/208 (32%), Positives = 98/208 (47%), Gaps = 44/208 (21%)
 Frame = -1

Query: 495 YPLDQYPWEEKIYWGDSSP--DNFSKE---------------------------DSEVEN 403
           YPLDQ  WE++I W +S P  DN ++                            + E+E 
Sbjct: 357 YPLDQQDWEDRIIWDNSPPLSDNTAESCEISEPDYEALTDKQLDVEAESQSLQSEKEIEP 416

Query: 402 HDLSN-------IIVEPFGQSSAIESKQIKESDRALHPQMLRLYNR------QFTSNDAD 262
           H+  +       + VEPFG         I  S+   HPQ+LRL +R      + T    D
Sbjct: 417 HEKGHSSFFSCSVSVEPFGSKQPSGHLDISLSEGRYHPQLLRLESRLNADRQRSTDTPKD 476

Query: 261 LEKSKRLKARFRSYLKKLSSQNCDLLNDSWTDNILWEQGSGISKEKIIFDLQDDRMLFEI 82
            +  + L +       KL+ QN D+L +SW DNI+WE      K K+I+DLQD++MLFE+
Sbjct: 477 EDTDEILSSDALRRFSKLTLQNRDILEESWVDNIIWEPDQPFPKPKLIYDLQDEQMLFEV 536

Query: 81  LD--DKHNLYSHASAMLINSSVKAATGE 4
           LD  D   L  HA AM+    VK ++G+
Sbjct: 537 LDNRDGQQLMLHAGAMITTGLVKPSSGD 564


>ref|XP_006366187.1| PREDICTED: transcription initiation factor TFIID subunit 1-like
           isoform X2 [Solanum tuberosum]
          Length = 1857

 Score =  105 bits (261), Expect = 8e-21
 Identities = 68/208 (32%), Positives = 98/208 (47%), Gaps = 44/208 (21%)
 Frame = -1

Query: 495 YPLDQYPWEEKIYWGDSSP--DNFSKE---------------------------DSEVEN 403
           YPLDQ  WE++I W +S P  DN ++                            + E+E 
Sbjct: 357 YPLDQQDWEDRIIWDNSPPLSDNTAESCEISEPDYEALTDKQLDVEAESQSLQSEKEIEP 416

Query: 402 HDLSN-------IIVEPFGQSSAIESKQIKESDRALHPQMLRLYNR------QFTSNDAD 262
           H+  +       + VEPFG         I  S+   HPQ+LRL +R      + T    D
Sbjct: 417 HEKGHSSFFSCSVSVEPFGSKQPSGHLDISLSEGRYHPQLLRLESRLNADRQRSTDTPKD 476

Query: 261 LEKSKRLKARFRSYLKKLSSQNCDLLNDSWTDNILWEQGSGISKEKIIFDLQDDRMLFEI 82
            +  + L +       KL+ QN D+L +SW DNI+WE      K K+I+DLQD++MLFE+
Sbjct: 477 EDTDEILSSDALRRFSKLTLQNRDILEESWVDNIIWEPDQPFPKPKLIYDLQDEQMLFEV 536

Query: 81  LD--DKHNLYSHASAMLINSSVKAATGE 4
           LD  D   L  HA AM+    VK ++G+
Sbjct: 537 LDNRDGQQLMLHAGAMITTGLVKPSSGD 564


>ref|XP_006366186.1| PREDICTED: transcription initiation factor TFIID subunit 1-like
           isoform X1 [Solanum tuberosum]
          Length = 1858

 Score =  105 bits (261), Expect = 8e-21
 Identities = 68/208 (32%), Positives = 98/208 (47%), Gaps = 44/208 (21%)
 Frame = -1

Query: 495 YPLDQYPWEEKIYWGDSSP--DNFSKE---------------------------DSEVEN 403
           YPLDQ  WE++I W +S P  DN ++                            + E+E 
Sbjct: 357 YPLDQQDWEDRIIWDNSPPLSDNTAESCEISEPDYEALTDKQLDVEAESQSLQSEKEIEP 416

Query: 402 HDLSN-------IIVEPFGQSSAIESKQIKESDRALHPQMLRLYNR------QFTSNDAD 262
           H+  +       + VEPFG         I  S+   HPQ+LRL +R      + T    D
Sbjct: 417 HEKGHSSFFSCSVSVEPFGSKQPSGHLDISLSEGRYHPQLLRLESRLNADRQRSTDTPKD 476

Query: 261 LEKSKRLKARFRSYLKKLSSQNCDLLNDSWTDNILWEQGSGISKEKIIFDLQDDRMLFEI 82
            +  + L +       KL+ QN D+L +SW DNI+WE      K K+I+DLQD++MLFE+
Sbjct: 477 EDTDEILSSDALRRFSKLTLQNRDILEESWVDNIIWEPDQPFPKPKLIYDLQDEQMLFEV 536

Query: 81  LD--DKHNLYSHASAMLINSSVKAATGE 4
           LD  D   L  HA AM+    VK ++G+
Sbjct: 537 LDNRDGQQLMLHAGAMITTGLVKPSSGD 564


>ref|XP_002273712.2| PREDICTED: transcription initiation factor TFIID subunit 1-A-like
            [Vitis vinifera]
          Length = 2068

 Score =  105 bits (261), Expect = 8e-21
 Identities = 77/211 (36%), Positives = 102/211 (48%), Gaps = 47/211 (22%)
 Frame = -1

Query: 495  YPLDQYPWEEKIYWGDSSPD---------NFSKEDSEV---------------------- 409
            YPLDQ  WE+KI W D+SP+           S  DSEV                      
Sbjct: 511  YPLDQQDWEDKIIW-DNSPEVSDNSAESCEISGPDSEVVVDKETELVTKAQNQRPKFQVA 569

Query: 408  ---ENHDL----SNIIVEPFGQSSAIESKQIKESDRALHPQMLRLYNRQFTSNDA----- 265
               ++H +    S +++E FG  ++        S+   HPQ+LRL  R    N +     
Sbjct: 570  VDEKDHGVFLGSSPVLIEAFGSRNSSALINHSLSEIKYHPQLLRLETRLEMDNSSQSAVR 629

Query: 264  --DLEKSKRLKARFRSYLKKLSSQNCDLLNDSWTDNILWEQGSGISKEKIIFDLQDDRML 91
              D  +  R     R +  KL+ QN D+L  SW D I+WE    ISK K+I DLQD++ML
Sbjct: 630  KEDAIEDPRGSEAIRRF-NKLTLQNRDMLEGSWVDRIIWEPHKPISKPKLILDLQDEQML 688

Query: 90   FEILDDK--HNLYSHASAMLINSSVKAATGE 4
            FEILDDK   NL  HA AMLI   VK++TG+
Sbjct: 689  FEILDDKDGKNLGLHAGAMLITRPVKSSTGD 719


>ref|XP_006842155.1| hypothetical protein AMTR_s00078p00132750 [Amborella trichopoda]
            gi|548844204|gb|ERN03830.1| hypothetical protein
            AMTR_s00078p00132750 [Amborella trichopoda]
          Length = 2104

 Score =  103 bits (257), Expect = 2e-20
 Identities = 61/152 (40%), Positives = 83/152 (54%), Gaps = 11/152 (7%)
 Frame = -1

Query: 426  KEDSEVENHDLSN---IIVEPFGQSSAIESKQIKESDRALHPQMLRLYNR------QFTS 274
            +E+ E++N        +IVEPF  +S ++      S+R  HPQ+LRL +       Q + 
Sbjct: 625  REEDEIDNSLFLQRFPVIVEPFDSNSTVDLMNFPCSERDFHPQILRLESSKKWDALQCSD 684

Query: 273  NDADLEKSKRLKARFRSYLKKLSSQNCDLLNDSWTDNILWEQGSGISKEKIIFDLQDDRM 94
                       +      L KLS QN DLL  SW D ILWE    +   K+I +LQD++M
Sbjct: 685  RQRPNGTDDAWRGDIMKLLSKLSLQNNDLLEGSWLDRILWEPSDSVPNSKLILNLQDEQM 744

Query: 93   LFEILDDK--HNLYSHASAMLINSSVKAATGE 4
            LFEILD+K   NLYSHA AM+I  SVK+ +GE
Sbjct: 745  LFEILDNKESENLYSHAGAMIITHSVKSNSGE 776


>ref|XP_004288581.1| PREDICTED: transcription initiation factor TFIID subunit 1-A-like
           [Fragaria vesca subsp. vesca]
          Length = 1851

 Score =  100 bits (248), Expect = 3e-19
 Identities = 72/217 (33%), Positives = 106/217 (48%), Gaps = 44/217 (20%)
 Frame = -1

Query: 522 LETSNSLYS--YPLDQYPWEEKIYWGDSS-PDNFSKEDSEVENHDLSNII---------- 382
           +ET + L S  +PLDQ  WEE+I+WG+S    N S E  E+   D  +II          
Sbjct: 307 VETKSPLCSTFFPLDQQDWEEEIFWGNSPVTSNKSVESCEISGPDEPSIISETEPDPGTQ 366

Query: 381 -------------------------VEPFGQSSAIESKQIKESDRALHPQMLRLYNRQFT 277
                                    +EPFG  +   S  +  SD   HPQ+LRL +R   
Sbjct: 367 KIHTHSQKELDEKDHSLMLHSYSTLLEPFGPRNFSGSPCLNLSDGRYHPQLLRLESRCEV 426

Query: 276 SNDAD--LEKS--KRLKARFRSYLKKLSSQNCDLLNDSWTDNILWEQGSGISKEKIIFDL 109
            + AD  ++ S  K  K     +  K SS+N D+L  SW D I+W+    I K K+I DL
Sbjct: 427 EDHADGRVDNSGEKLHKGHTVRHFSKHSSKNRDILEGSWLDQIIWDPDIPIRKPKLILDL 486

Query: 108 QDDRMLFEILDDK--HNLYSHASAMLINSSVKAATGE 4
           +D++MLFEI D+K   +L  H+ AM++   +K++ G+
Sbjct: 487 EDEQMLFEISDNKDCEHLKLHSGAMIVTRPLKSSNGD 523


>ref|XP_004242685.1| PREDICTED: transcription initiation factor TFIID subunit 1-A-like
           [Solanum lycopersicum]
          Length = 1856

 Score = 99.4 bits (246), Expect = 4e-19
 Identities = 65/208 (31%), Positives = 95/208 (45%), Gaps = 44/208 (21%)
 Frame = -1

Query: 495 YPLDQYPWEEKIYWGDSSP--DNFSKE---------------------------DSEVEN 403
           YP DQ  WE++I W +S P  DN ++                            + E+E 
Sbjct: 357 YPFDQQDWEDRIIWDNSPPLSDNTAESCEISEPDYEALTDKQLDVEAESQSLQSEKEIEP 416

Query: 402 HDLSN-------IIVEPFGQSSAIESKQIKESDRALHPQMLRLYNR------QFTSNDAD 262
           H+  +       + VEPFG            S+   HPQ+LRL +R      + T    D
Sbjct: 417 HEKGHSSFFSCSVSVEPFGSKQPSGHLDFSLSEGRYHPQLLRLESRLNSDKQKSTDTPKD 476

Query: 261 LEKSKRLKARFRSYLKKLSSQNCDLLNDSWTDNILWEQGSGISKEKIIFDLQDDRMLFEI 82
            +  + L +       KL+ QN D+L +SW DNI+WE      K K+I+DLQD++MLFE+
Sbjct: 477 GDTDEILSSDALKRFTKLTLQNRDILEESWVDNIIWEPDQPFPKPKLIYDLQDEQMLFEV 536

Query: 81  LD--DKHNLYSHASAMLINSSVKAATGE 4
           L   D   L  HA AM+    VK ++G+
Sbjct: 537 LHNRDDQQLMLHAGAMITTGLVKPSSGD 564


>ref|XP_006587644.1| PREDICTED: transcription initiation factor TFIID subunit 1-like
           isoform X3 [Glycine max]
          Length = 1841

 Score = 98.2 bits (243), Expect = 1e-18
 Identities = 68/209 (32%), Positives = 103/209 (49%), Gaps = 45/209 (21%)
 Frame = -1

Query: 495 YPLDQYPWEEKIYWGDSSPDNFSKEDS--------------------------------- 415
           YPLDQ  WE+KI WG+S   +++  +S                                 
Sbjct: 315 YPLDQQDWEDKILWGNSPVPSYNNVESCEISGPELGASGGSEIEIESGIHNIQMEPQKVL 374

Query: 414 EVENHDL----SNIIVEPFGQSSAIESKQIKESDRALHPQMLRLYNRQFTSNDA-----D 262
           E +NH++    S + +EPFG   +  +K    S    HPQ+LRL +R    + +     D
Sbjct: 375 EDKNHNVLMRSSPVKLEPFGSRDSSGAKTNLISRSLFHPQLLRLESRSEVDSSSLADGRD 434

Query: 261 LEKSKRLKARFRSYLKKLSSQNCDLLNDSWTDNILWEQGSGIS-KEKIIFDLQDDRMLFE 85
            E S+  ++       K+ SQN D++  SW D I+WE+    S K K+IFDLQDD+M FE
Sbjct: 435 AEISEHNQSGQVKRFTKVISQNRDMMEGSWLDKIIWEELDQPSVKPKLIFDLQDDQMHFE 494

Query: 84  ILDDKH--NLYSHASAMLINSSVKAATGE 4
           +LD K   +L  HA AM++  S+K ++G+
Sbjct: 495 VLDTKDGTHLCLHAGAMILTHSLKLSSGD 523


>ref|XP_006587643.1| PREDICTED: transcription initiation factor TFIID subunit 1-like
           isoform X2 [Glycine max]
          Length = 1877

 Score = 98.2 bits (243), Expect = 1e-18
 Identities = 68/209 (32%), Positives = 103/209 (49%), Gaps = 45/209 (21%)
 Frame = -1

Query: 495 YPLDQYPWEEKIYWGDSSPDNFSKEDS--------------------------------- 415
           YPLDQ  WE+KI WG+S   +++  +S                                 
Sbjct: 351 YPLDQQDWEDKILWGNSPVPSYNNVESCEISGPELGASGGSEIEIESGIHNIQMEPQKVL 410

Query: 414 EVENHDL----SNIIVEPFGQSSAIESKQIKESDRALHPQMLRLYNRQFTSNDA-----D 262
           E +NH++    S + +EPFG   +  +K    S    HPQ+LRL +R    + +     D
Sbjct: 411 EDKNHNVLMRSSPVKLEPFGSRDSSGAKTNLISRSLFHPQLLRLESRSEVDSSSLADGRD 470

Query: 261 LEKSKRLKARFRSYLKKLSSQNCDLLNDSWTDNILWEQGSGIS-KEKIIFDLQDDRMLFE 85
            E S+  ++       K+ SQN D++  SW D I+WE+    S K K+IFDLQDD+M FE
Sbjct: 471 AEISEHNQSGQVKRFTKVISQNRDMMEGSWLDKIIWEELDQPSVKPKLIFDLQDDQMHFE 530

Query: 84  ILDDKH--NLYSHASAMLINSSVKAATGE 4
           +LD K   +L  HA AM++  S+K ++G+
Sbjct: 531 VLDTKDGTHLCLHAGAMILTHSLKLSSGD 559


>ref|XP_006587642.1| PREDICTED: transcription initiation factor TFIID subunit 1-like
           isoform X1 [Glycine max]
          Length = 1890

 Score = 98.2 bits (243), Expect = 1e-18
 Identities = 68/209 (32%), Positives = 103/209 (49%), Gaps = 45/209 (21%)
 Frame = -1

Query: 495 YPLDQYPWEEKIYWGDSSPDNFSKEDS--------------------------------- 415
           YPLDQ  WE+KI WG+S   +++  +S                                 
Sbjct: 364 YPLDQQDWEDKILWGNSPVPSYNNVESCEISGPELGASGGSEIEIESGIHNIQMEPQKVL 423

Query: 414 EVENHDL----SNIIVEPFGQSSAIESKQIKESDRALHPQMLRLYNRQFTSNDA-----D 262
           E +NH++    S + +EPFG   +  +K    S    HPQ+LRL +R    + +     D
Sbjct: 424 EDKNHNVLMRSSPVKLEPFGSRDSSGAKTNLISRSLFHPQLLRLESRSEVDSSSLADGRD 483

Query: 261 LEKSKRLKARFRSYLKKLSSQNCDLLNDSWTDNILWEQGSGIS-KEKIIFDLQDDRMLFE 85
            E S+  ++       K+ SQN D++  SW D I+WE+    S K K+IFDLQDD+M FE
Sbjct: 484 AEISEHNQSGQVKRFTKVISQNRDMMEGSWLDKIIWEELDQPSVKPKLIFDLQDDQMHFE 543

Query: 84  ILDDKH--NLYSHASAMLINSSVKAATGE 4
           +LD K   +L  HA AM++  S+K ++G+
Sbjct: 544 VLDTKDGTHLCLHAGAMILTHSLKLSSGD 572


>ref|XP_002323740.2| hypothetical protein POPTR_0017s07490g [Populus trichocarpa]
           gi|550319704|gb|EEF03873.2| hypothetical protein
           POPTR_0017s07490g [Populus trichocarpa]
          Length = 1820

 Score = 97.8 bits (242), Expect = 1e-18
 Identities = 73/221 (33%), Positives = 103/221 (46%), Gaps = 52/221 (23%)
 Frame = -1

Query: 525 ELETSNSLYS--YPLDQYPWEEKIYWGDS------------------------------S 442
           E+E  + ++S  YPLDQ  WEE+I W +S                              S
Sbjct: 263 EVEWKSPVHSKFYPLDQQDWEERILWDNSPAISDNSVESFDLSGPDTGSSFIRESEQVTS 322

Query: 441 PDNFSKEDSEVENHDLSN-------IIVEPFGQSSAIESKQIKESDRALHPQMLRLYNRQ 283
           P N   E     N + SN       +++E FG   + E   +  S+   HPQ+LRL ++ 
Sbjct: 323 PQNLCSELPVELNENTSNFLRNRSSVLLESFGSEDSSEPGNLPFSESRCHPQLLRLESQM 382

Query: 282 FT-----------SNDADLEKSKRLKARFRSYLKKLSSQNCDLLNDSWTDNILWEQGSGI 136
                        +N A+L +S  ++ RF     KL+ QN DL+  SW DNI+WE     
Sbjct: 383 EVDSSSHVDDRRENNSAELHESDAVR-RF----SKLTLQNRDLMEGSWLDNIIWEPNETN 437

Query: 135 SKEKIIFDLQDDRMLFEILD--DKHNLYSHASAMLINSSVK 19
            K K+I DLQD +MLFEILD  D  +L  HA AM+I  ++K
Sbjct: 438 IKPKLILDLQDKQMLFEILDHRDSKHLQLHAGAMIITRTLK 478


>gb|EMJ26687.1| hypothetical protein PRUPE_ppa000092mg [Prunus persica]
          Length = 1849

 Score = 97.8 bits (242), Expect = 1e-18
 Identities = 66/206 (32%), Positives = 93/206 (45%), Gaps = 42/206 (20%)
 Frame = -1

Query: 495 YPLDQYPWEEKIYWGDS--------------SPDNFSKEDSEVENHDLSNIIVEP----- 373
           YPLDQ  WEE I WG+S               PD FS       +    NI++EP     
Sbjct: 296 YPLDQLDWEEGIVWGNSPVASDNSDESCEISGPDEFSINSETEPDSGSQNILLEPPKEPY 355

Query: 372 -----------------FGQSSAIESKQIKESDRALHPQMLRLYNR----QFTSNDADLE 256
                            FG  ++ E   +  S+   HPQ+LRL +R      T    +  
Sbjct: 356 EKDHAVVLHSSCSLLEPFGSRNSSELLCLPVSESRCHPQLLRLESRFEVDDHTDGTMESV 415

Query: 255 KSKRLKARFRSYLKKLSSQNCDLLNDSWTDNILWEQGSGISKEKIIFDLQDDRMLFEILD 76
             K  ++       KL+SQN D+L  SW D I+W+      K K+I DLQD++MLFEILD
Sbjct: 416 GEKLHQSDAVREFSKLTSQNRDMLKGSWLDQIIWDPDMPTGKPKLILDLQDEQMLFEILD 475

Query: 75  DK--HNLYSHASAMLINSSVKAATGE 4
           +K   +L  H+ AM++   V  + G+
Sbjct: 476 NKESEHLRLHSGAMIVTRPVNLSNGD 501


>ref|XP_006578383.1| PREDICTED: transcription initiation factor TFIID subunit 1-like
           isoform X2 [Glycine max]
          Length = 1848

 Score = 95.5 bits (236), Expect = 6e-18
 Identities = 66/209 (31%), Positives = 100/209 (47%), Gaps = 45/209 (21%)
 Frame = -1

Query: 495 YPLDQYPWEEKIYWGDSS-PDNFSKEDSEVENHDL------------------------- 394
           YPLDQ  WE++I WG+S  P N + E  E+   +L                         
Sbjct: 364 YPLDQQDWEDEILWGNSPVPSNNNVESCEISGPELGASGGSEIEIESGIQSIQMEPQKKL 423

Query: 393 -----------SNIIVEPFGQSSAIESKQIKESDRALHPQMLRLYNRQFTSNDA-----D 262
                      S + VEPFG   +  +K    S    HPQ+LRL +R    + +     +
Sbjct: 424 EDKDHNVLMCSSPVKVEPFGSWDSFGAKTNLISRSLFHPQLLRLESRSEVDSSSLADGRE 483

Query: 261 LEKSKRLKARFRSYLKKLSSQNCDLLNDSWTDNILWEQ-GSGISKEKIIFDLQDDRMLFE 85
            E S+  ++       K+ SQN D++  SW D I+WE+    + K K+IFDLQDD+M FE
Sbjct: 484 AEISEHNQSGQVKRFTKVISQNRDMMEGSWLDKIIWEELDQPMVKPKLIFDLQDDQMHFE 543

Query: 84  ILDDKH--NLYSHASAMLINSSVKAATGE 4
           +LD K   +L  HA AM++  S+++ +G+
Sbjct: 544 VLDSKDGTHLRLHAGAMILTRSLQSISGD 572


>ref|XP_006578382.1| PREDICTED: transcription initiation factor TFIID subunit 1-like
           isoform X1 [Glycine max]
          Length = 1889

 Score = 95.5 bits (236), Expect = 6e-18
 Identities = 66/209 (31%), Positives = 100/209 (47%), Gaps = 45/209 (21%)
 Frame = -1

Query: 495 YPLDQYPWEEKIYWGDSS-PDNFSKEDSEVENHDL------------------------- 394
           YPLDQ  WE++I WG+S  P N + E  E+   +L                         
Sbjct: 364 YPLDQQDWEDEILWGNSPVPSNNNVESCEISGPELGASGGSEIEIESGIQSIQMEPQKKL 423

Query: 393 -----------SNIIVEPFGQSSAIESKQIKESDRALHPQMLRLYNRQFTSNDA-----D 262
                      S + VEPFG   +  +K    S    HPQ+LRL +R    + +     +
Sbjct: 424 EDKDHNVLMCSSPVKVEPFGSWDSFGAKTNLISRSLFHPQLLRLESRSEVDSSSLADGRE 483

Query: 261 LEKSKRLKARFRSYLKKLSSQNCDLLNDSWTDNILWEQ-GSGISKEKIIFDLQDDRMLFE 85
            E S+  ++       K+ SQN D++  SW D I+WE+    + K K+IFDLQDD+M FE
Sbjct: 484 AEISEHNQSGQVKRFTKVISQNRDMMEGSWLDKIIWEELDQPMVKPKLIFDLQDDQMHFE 543

Query: 84  ILDDKH--NLYSHASAMLINSSVKAATGE 4
           +LD K   +L  HA AM++  S+++ +G+
Sbjct: 544 VLDSKDGTHLRLHAGAMILTRSLQSISGD 572


>ref|XP_006494604.1| PREDICTED: transcription initiation factor TFIID subunit 1-like
           [Citrus sinensis]
          Length = 1944

 Score = 94.7 bits (234), Expect = 1e-17
 Identities = 63/212 (29%), Positives = 103/212 (48%), Gaps = 48/212 (22%)
 Frame = -1

Query: 495 YPLDQYPWEEKIYWGDSSPDNFSKEDSEVENHDL-------------------------- 394
           +PLDQ+ WEE I W D+SP   +  D+ +E+H++                          
Sbjct: 371 FPLDQHDWEENIVW-DNSP---AASDNSIESHEIAGADVESALMRGIELDTGQNNFHERS 426

Query: 393 --------------SNIIVEPFGQSSAIESKQIKESDRALHPQMLRLYNRQFTSNDAD-- 262
                         S ++ E FG  S+ ++     ++   HPQ+LRL ++    N +   
Sbjct: 427 TSPNEKDCIVNMQNSPVLSETFGSKSSSDNTSHLFTESRYHPQLLRLESQLDLDNHSHAN 486

Query: 261 -LEKSKRLKARFRSYLKKLSS---QNCDLLNDSWTDNILWEQGSGISKEKIIFDLQDDRM 94
            ++++  +K      +K+ S    QN D++  SW DNI+WE    + K K+I DLQD++M
Sbjct: 487 GIKENVSIKLCQSDAVKRFSKRSLQNRDMMEGSWLDNIIWEPVDAVGKPKLILDLQDEQM 546

Query: 93  LFEILDDKHNLYS--HASAMLINSSVKAATGE 4
           LFEILD+K + +   HA AM+I  S K + G+
Sbjct: 547 LFEILDNKDDEHPLLHAGAMIITRSAKPSGGD 578


>ref|XP_006420853.1| hypothetical protein CICLE_v100041253mg, partial [Citrus
           clementina] gi|557522726|gb|ESR34093.1| hypothetical
           protein CICLE_v100041253mg, partial [Citrus clementina]
          Length = 1051

 Score = 94.7 bits (234), Expect = 1e-17
 Identities = 63/208 (30%), Positives = 101/208 (48%), Gaps = 44/208 (21%)
 Frame = -1

Query: 495 YPLDQYPWEEKIYWGDS-SPDNFSKEDSEVENHDL------------------------- 394
           +PLDQ+ WEE I W +S +P + S E  E+   D+                         
Sbjct: 282 FPLDQHDWEENIVWDNSPAPSDNSIESHEIAGADVESALMRGIELDTGQNNFHERSTSPN 341

Query: 393 ----------SNIIVEPFGQSSAIESKQIKESDRALHPQMLRLYNRQFTSNDAD---LEK 253
                     S ++ E FG  S+ ++     ++   HPQ+LRL ++    N +    +++
Sbjct: 342 EKDCIVNMQNSPVLSETFGSKSSSDNTSHVFTESRYHPQLLRLESQLDLDNHSHANGIKE 401

Query: 252 SKRLKARFRSYLKKLSS---QNCDLLNDSWTDNILWEQGSGISKEKIIFDLQDDRMLFEI 82
           +  +K      +K+ S    QN D++  SW DNI+WE    + K K+I DLQD++MLFEI
Sbjct: 402 NVSIKLCQSDAVKRFSKHSLQNRDMMEGSWLDNIIWEPVDAVGKPKLILDLQDEQMLFEI 461

Query: 81  LDDKHNLYS--HASAMLINSSVKAATGE 4
           LD+K + +   HA AM+I  S K + G+
Sbjct: 462 LDNKDDEHPLLHAGAMIITRSAKPSGGD 489


>gb|ESW30129.1| hypothetical protein PHAVU_002G127400g [Phaseolus vulgaris]
          Length = 1897

 Score = 92.8 bits (229), Expect = 4e-17
 Identities = 67/208 (32%), Positives = 103/208 (49%), Gaps = 44/208 (21%)
 Frame = -1

Query: 495 YPLDQYPWEEKIYWGDSS-PDNFSKEDSEVENHDL------------------------- 394
           YPLDQ  WE++I WG+S  P N + E  EV   +L                         
Sbjct: 364 YPLDQQDWEDEIIWGNSPVPSNNNIESCEVSGPELGVSGGSEIEIESGIQTIQIEPYKIL 423

Query: 393 ----------SNIIVEPFGQSSAIESKQIKESDRALHPQMLRLYNRQF--TSNDADLEKS 250
                     S + +E FG   +  +K    S    HPQ+LRL +R    +S+ AD ++ 
Sbjct: 424 EDKDHNVSLSSPVSLEAFGSRGSSGAKTNLISRSLFHPQLLRLESRSEVDSSSLADGKEG 483

Query: 249 KRLKARFRSYLKKLS---SQNCDLLNDSWTDNILWEQ-GSGISKEKIIFDLQDDRMLFEI 82
           +  K    S + + +   SQN D++  SW D I+WE+    + K K+IFDLQDD+M FE+
Sbjct: 484 EICKHNQSSQITRFNKAISQNRDMMEGSWLDEIIWEELDQPMVKPKLIFDLQDDQMHFEV 543

Query: 81  LDDKH--NLYSHASAMLINSSVKAATGE 4
           LD K   +L  HA A+++  S+K+++G+
Sbjct: 544 LDSKDGAHLCLHAGAIILTRSLKSSSGD 571


>ref|XP_002309876.2| ubiquitin family protein [Populus trichocarpa]
           gi|550334051|gb|EEE90326.2| ubiquitin family protein
           [Populus trichocarpa]
          Length = 1891

 Score = 92.8 bits (229), Expect = 4e-17
 Identities = 69/208 (33%), Positives = 94/208 (45%), Gaps = 50/208 (24%)
 Frame = -1

Query: 492 PLDQYPWEEKIYWGDS------------------------------SPDNFSKEDSEVEN 403
           PLDQ+ WEE+I W +S                              SP N   E     N
Sbjct: 346 PLDQHDWEERILWDNSPVISDNSVESCDQSGSELGSSFVIETEQVTSPPNLHSEHPVELN 405

Query: 402 HDLSN-------IIVEPFGQSSAIESKQIKESDRALHPQMLRLYNR-----------QFT 277
            +L N       +++E FG     E   +   +   HPQ+LRL +R           +  
Sbjct: 406 ENLDNCFWNRSYVLLESFGSGDYSEPGNLPLLESRCHPQLLRLESRLEEDSSNHVNDRRE 465

Query: 276 SNDADLEKSKRLKARFRSYLKKLSSQNCDLLNDSWTDNILWEQGSGISKEKIIFDLQDDR 97
           +N  +L KS  L+ RF     KL+ QN DL+  SW D+I+WE      K K+I DLQD++
Sbjct: 466 NNAVELHKSDALR-RF----SKLTLQNRDLMEGSWLDDIIWEPCEANIKPKLILDLQDEQ 520

Query: 96  MLFEILD--DKHNLYSHASAMLINSSVK 19
           MLFEILD  D  +L  HA AM+I   +K
Sbjct: 521 MLFEILDHRDSKHLQLHAGAMIITRPLK 548


>sp|Q67W65.1|TAF1_ORYSJ RecName: Full=Transcription initiation factor TFIID subunit 1;
           AltName: Full=TAFII250 gi|51535532|dbj|BAD37451.1|
           putative HAC13 protein [Oryza sativa Japonica Group]
           gi|51535630|dbj|BAD37604.1| putative HAC13 protein
           [Oryza sativa Japonica Group]
          Length = 1810

 Score = 92.4 bits (228), Expect = 5e-17
 Identities = 60/192 (31%), Positives = 93/192 (48%), Gaps = 28/192 (14%)
 Frame = -1

Query: 495 YPLDQYPWEEKIYWGDSSPDNF---------SKEDSEVENHDL----------------- 394
           YPL+   WE  I WG+S              SKE  +  N D                  
Sbjct: 348 YPLEHENWENDIVWGNSPTTAIQPCLTSCAISKESLDDHNEDQAEGYVSGCWDVQNKFHS 407

Query: 393 SNIIVEPFGQSSAIESKQIKESDRALHPQMLRLYNRQFTSNDADLEKSKRLKARFRSYLK 214
           S+++ +PFG +   +S   +  + +  P + +   ++  S D     ++ +K     +L 
Sbjct: 408 SSVMADPFGHTEIPDSTSYRSPENSYSP-LRKETAQENNSLDEPNNITQPVKIDTTRHLN 466

Query: 213 KLSSQNCDLLNDSWTDNILWEQGSGISKEKIIFDLQDDRMLFEILDDKH--NLYSHASAM 40
           KLS  N +LL  SW DNI+W+    + K K+IFDL+DD MLFEILD+K+  +L SHA AM
Sbjct: 467 KLSLLNKELLEGSWLDNIVWDPSEDVPKPKLIFDLKDDHMLFEILDEKNGDHLRSHARAM 526

Query: 39  LINSSVKAATGE 4
           ++   +K +  E
Sbjct: 527 IVTRPMKTSAVE 538