BLASTX nr result

ID: Ephedra25_contig00024763 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra25_contig00024763
         (519 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABK24813.1| unknown [Picea sitchensis]                              76   5e-12
ref|XP_001758913.1| predicted protein [Physcomitrella patens] gi...    56   6e-06

>gb|ABK24813.1| unknown [Picea sitchensis]
          Length = 285

 Score = 75.9 bits (185), Expect = 5e-12
 Identities = 50/155 (32%), Positives = 86/155 (55%), Gaps = 14/155 (9%)
 Frame = +3

Query: 96  VALKAFMVLHRLLREGGPAYNDHV-----VHYQTFFNLQDKTGTDKAAAWT----VREYA 248
           VALK+ +++HRLLREG     D +        +++ NL        A  W     VR YA
Sbjct: 13  VALKSLVLIHRLLREGDFILQDQLSVDTFTRGRSYLNLAGFKDNSTALTWHLSSWVRCYA 72

Query: 249 RYLDARVAGCKGIGKYLDG--VPRSPSNVA--AILRDVASLADLLGSVCDFL-GVVKEMN 413
           RY+D  +  C+ +G++LDG    RS S +    +LR++++L DLL + C+ L G  ++  
Sbjct: 73  RYIDQWLCTCRALGEFLDGRSGDRSTSGLVNRELLRELSALGDLLAATCECLQGAPRD-- 130

Query: 414 YAEDVNRLFVECARLVAADGWRIQEEISVRVEEMK 518
             +  + + +E  R+V  D W+++EE  VR+E+++
Sbjct: 131 -GQKSSPVVLEALRMVLVDTWQLREEALVRLEDVR 164


>ref|XP_001758913.1| predicted protein [Physcomitrella patens]
           gi|162690050|gb|EDQ76419.1| predicted protein
           [Physcomitrella patens]
          Length = 445

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 46/153 (30%), Positives = 76/153 (49%), Gaps = 13/153 (8%)
 Frame = +3

Query: 96  VALKAFMVLHRLLREGGPAYNDHVVH--------YQTFFNLQ-DKTGTDKAAAWTVREYA 248
           VA+K  ++LHR   +GG  + D + +        Y +F N + D +  D    + V+ YA
Sbjct: 137 VAIKCLIILHRCHLDGGFLFQDLLAYNSTKEGKGYLSFPNFKSDPSSVDWPFFFWVKRYA 196

Query: 249 RYLDARVAGCKGIGKYLDGVPRSPS--NVAAIL--RDVASLADLLGSVCDFLGVVKEMNY 416
           RYLD R+  C+ +  +LD   +S S  N   I   R++    D+L S+   L   K    
Sbjct: 197 RYLDERLCCCRALKSHLDSRWKSHSFQNTVEITDSRELLHQLDVLQSLLHELCQCKPSAE 256

Query: 417 AEDVNRLFVECARLVAADGWRIQEEISVRVEEM 515
           AE+ + +      LV  D +++ +EI VR++EM
Sbjct: 257 AEE-HPVIQGALVLVVMDSYKVHDEIRVRLKEM 288


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