BLASTX nr result
ID: Ephedra25_contig00024755
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra25_contig00024755
(1387 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ABK25122.1| unknown [Picea sitchensis] 301 4e-79
ref|XP_006286634.1| hypothetical protein CARUB_v10002473mg [Caps... 218 4e-54
ref|XP_002444167.1| hypothetical protein SORBIDRAFT_07g011860 [S... 217 8e-54
ref|XP_002871645.1| pentatricopeptide repeat-containing protein ... 217 1e-53
ref|XP_004305478.1| PREDICTED: pentatricopeptide repeat-containi... 216 2e-53
ref|XP_002525469.1| pentatricopeptide repeat-containing protein,... 214 5e-53
ref|XP_004136099.1| PREDICTED: pentatricopeptide repeat-containi... 214 7e-53
ref|XP_006400022.1| hypothetical protein EUTSA_v10015264mg [Eutr... 213 2e-52
ref|XP_003624580.1| Pentatricopeptide repeat-containing protein ... 213 2e-52
ref|XP_002275952.1| PREDICTED: pentatricopeptide repeat-containi... 213 2e-52
gb|EOY26078.1| Tetratricopeptide repeat (TPR)-like superfamily p... 211 6e-52
ref|XP_002319140.2| pentatricopeptide repeat-containing family p... 211 8e-52
ref|XP_002319139.1| predicted protein [Populus trichocarpa] 211 8e-52
ref|NP_001168961.1| hypothetical protein [Zea mays] gi|223974035... 210 1e-51
ref|XP_004235894.1| PREDICTED: pentatricopeptide repeat-containi... 210 1e-51
ref|NP_001061426.1| Os08g0272200 [Oryza sativa Japonica Group] g... 210 1e-51
ref|XP_006387693.1| hypothetical protein POPTR_0671s00210g [Popu... 209 2e-51
ref|NP_197005.2| pentatricopeptide repeat-containing protein [Ar... 209 2e-51
emb|CAC01820.1| putative protein [Arabidopsis thaliana] 209 2e-51
ref|NP_178203.1| pentatricopeptide repeat-containing protein [Ar... 208 4e-51
>gb|ABK25122.1| unknown [Picea sitchensis]
Length = 572
Score = 301 bits (771), Expect = 4e-79
Identities = 155/363 (42%), Positives = 233/363 (64%)
Frame = +3
Query: 291 GFCTSSPKHENQEKENGTSESQRGFDKVVRVATTLKNSPSVVHSLSQLNALRGVPPTGEV 470
G+ + HE+ E ++E GF+KV+ + L + P + + + L+ +P V
Sbjct: 85 GYTSDEHIHESDEDPEVSNEGS-GFNKVLSITKDLHSLP-IEEARTALDDCGFIPSPNLV 142
Query: 471 LKIMCTVEDDWKACLSLFHWAEPHAREKSEKVDLYHTLITILARHRRFSLAWSMADKMKQ 650
K++ ++ D KA +F WA + S V +YHT+I+IL HR+F W + KM +
Sbjct: 143 QKLLRRLQYDGKAAFRVFQWAGSQP-DYSHTVSVYHTMISILGVHRKFDKGWGLIRKMHE 201
Query: 651 QSMLSSQTMRIIIEGYIVAGDVSRAVRTFSNMEYFGPSPNYDDLLSVLKMLCKHMYVEDA 830
++M++ QT+ I+I+ Y A D +A++TF M+ F + + DD L +L LC++M+VE+A
Sbjct: 202 RAMVNRQTLMIMIKRYAAAHDARKAIKTFHAMDKFKLAADSDDFLCLLCALCRNMFVEEA 261
Query: 831 EILIDKNKKHFPLDIKSFNVLLDAWCNIVDDKREVKRVWEKLSDHCITPDAVSYMTVIPY 1010
E LI NKK +PL+ KSFNV+L WCNI D +VKR+WE++S+ CITPDA SY TVI
Sbjct: 262 EELIHFNKKCYPLETKSFNVILYGWCNIFVDVYQVKRLWEEMSNLCITPDAFSYTTVICC 321
Query: 1011 YMKVDKFYDVVRLYSRMRKQGLIPNLDIVNSVISVLAKENCVIEAMNVFKSLEELGLNPD 1190
+ K KFYDVVRLY M+K+G PNL + N+VI VL+KE CV EA+N+F + E+G +P+
Sbjct: 322 FSKAGKFYDVVRLYDEMKKKGFTPNLKVYNAVIYVLSKERCVKEALNLFNKIREMGFHPN 381
Query: 1191 AVTYTCIINLCCQTWKKNESSDMLEKMIGAGFSPPLEIHNSFFRFIEDGDSIFKHLVRMI 1370
AVTYT +I L C+TWK E+ L+KMI GF P ++I+++FFRF+E+ +I K +M
Sbjct: 382 AVTYTYLIYLLCRTWKPEEAYSYLDKMIMEGFVPTIDIYHAFFRFVENEGAICKLFDKMF 441
Query: 1371 KTG 1379
+ G
Sbjct: 442 ENG 444
>ref|XP_006286634.1| hypothetical protein CARUB_v10002473mg [Capsella rubella]
gi|482555340|gb|EOA19532.1| hypothetical protein
CARUB_v10002473mg [Capsella rubella]
Length = 580
Score = 218 bits (556), Expect = 4e-54
Identities = 129/383 (33%), Positives = 212/383 (55%), Gaps = 13/383 (3%)
Frame = +3
Query: 270 QLSSKNCGFCTSS-PKHENQEKENGTSESQRGFDKVV-----RVATTLKNSPSVVHSLSQ 431
++ S+ GF S+ K + E+E DKVV +++ LK+ S L
Sbjct: 62 KVDSEQVGFNQSNNDKDDESEEEIDLDFGCIISDKVVSEDVGKISKLLKDCGSDRKELRD 121
Query: 432 LNALRGVPPTGE-VLKIMCTVEDDWKACLSLFHWA---EPHAREKSEKVDLYHTLITILA 599
V P+ E V++I+ +DW+A + F WA + + R E YH++I+IL
Sbjct: 122 KLEGCDVKPSNELVVEILSQARNDWEAAFTFFVWAGKQQGYVRSVRE----YHSMISILG 177
Query: 600 RHRRFSLAWSMADKMKQ--QSMLSSQTMRIIIEGYIVAGDVSRAVRTFSNMEYFGPSPNY 773
+ R+F AW++ D+M++ S+++SQT+ I+I Y DV +A+ TF + F
Sbjct: 178 KMRKFDTAWALIDEMRKFSPSLVNSQTLLIMIRKYCAVHDVGKAINTFHAYKRFKLEMGI 237
Query: 774 DDLLSVLKMLCKHMYVEDAEILIDKNKKHFPLDIKSFNVLLDAWCNIVDDKREVKRVWEK 953
DD S+L LC++ V DAE LI NK +P D KSFN++L+ WCN++ RE +RVW +
Sbjct: 238 DDFQSLLSALCRYKNVSDAEHLIFCNKTTYPFDAKSFNIVLNGWCNVIGSPRESERVWLE 297
Query: 954 LSDHCITPDAVSYMTVIPYYMKVDKFYDVVRLYSRMRKQGLIPNLDIVNSVISVLAKENC 1133
+ + + D VSY ++ Y K V+RL+ RM+K+G+ P+ + N+V+ LAK +
Sbjct: 298 MGNVGVKHDVVSYSCMMSCYSKGGSLNKVLRLFDRMKKEGIEPDRKVYNAVVHALAKASF 357
Query: 1134 VIEAMNVFKSL-EELGLNPDAVTYTCIINLCCQTWKKNESSDMLEKMIGAGFSPPLEIHN 1310
V EA N+ K++ EE G+ P+ VTY II C+ K E+ + ++M+G G P + ++
Sbjct: 358 VSEARNLMKTMEEEKGIKPNVVTYNSIIKPLCKARKTEEAKQVFDEMLGKGLFPTIRTYH 417
Query: 1311 SFFRFIEDGDSIFKHLVRMIKTG 1379
+F R + G+ +F+ L +M K G
Sbjct: 418 AFMRILRTGEEVFELLAKMRKMG 440
>ref|XP_002444167.1| hypothetical protein SORBIDRAFT_07g011860 [Sorghum bicolor]
gi|241940517|gb|EES13662.1| hypothetical protein
SORBIDRAFT_07g011860 [Sorghum bicolor]
Length = 520
Score = 217 bits (553), Expect = 8e-54
Identities = 121/344 (35%), Positives = 194/344 (56%), Gaps = 10/344 (2%)
Frame = +3
Query: 378 RVATTLKNSPSVVHSLSQLNALR-GVPPTGEVLKIMCTVE---DDWKACLSLFHWAEPHA 545
R+++ ++ S +LS L +L G P L + E D A L+L + E A
Sbjct: 64 RLSSAASSTSSPKEALSLLLSLSPGPSPASPALLVRALWELRRDPDTAALALRYGDECSA 123
Query: 546 REKSE------KVDLYHTLITILARHRRFSLAWSMADKMKQQSMLSSQTMRIIIEGYIVA 707
+ ++ D +H + + RRF LAW++ +M+ + +L+ + M I++E Y A
Sbjct: 124 VDGADGAGLPPPADAWHLAVWAAGKARRFDLAWAVVRRMRNRGVLTGRAMVILMERYAAA 183
Query: 708 GDVSRAVRTFSNMEYFGPSPNYDDLLSVLKMLCKHMYVEDAEILIDKNKKHFPLDIKSFN 887
+V++AV+TF ME F + S+L+ LCK +EDAE L+ KK FPL + FN
Sbjct: 184 NEVNKAVKTFDVMEKFKVESDQSVFYSLLRALCKSKNIEDAEELLLLRKKFFPLSAEGFN 243
Query: 888 VLLDAWCNIVDDKREVKRVWEKLSDHCITPDAVSYMTVIPYYMKVDKFYDVVRLYSRMRK 1067
++LD WCN++ D E KRVW ++S+HCITPD +SY +I + KV +D +R+Y M+K
Sbjct: 244 IILDGWCNVITDLAEAKRVWREMSNHCITPDGMSYTLMISCFSKVGSLFDTLRVYDEMKK 303
Query: 1068 QGLIPNLDIVNSVISVLAKENCVIEAMNVFKSLEELGLNPDAVTYTCIINLCCQTWKKNE 1247
+G IP + + NS++ VL +ENCV +A N+F L + GL PD TY +I C++ K +E
Sbjct: 304 RGWIPGIGVYNSLVYVLTRENCVKDAHNIFSKLTDEGLQPDVETYNSMIVPLCESCKLDE 363
Query: 1248 SSDMLEKMIGAGFSPPLEIHNSFFRFIEDGDSIFKHLVRMIKTG 1379
+ ++E MI G P + +++F + E D K L +M + G
Sbjct: 364 ARVVMESMILKGIVPTISTYHAFLK-QEGIDESLKLLQKMKEDG 406
>ref|XP_002871645.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata] gi|297317482|gb|EFH47904.1|
pentatricopeptide repeat-containing protein [Arabidopsis
lyrata subsp. lyrata]
Length = 524
Score = 217 bits (552), Expect = 1e-53
Identities = 126/380 (33%), Positives = 210/380 (55%), Gaps = 13/380 (3%)
Frame = +3
Query: 279 SKNCGFCTSSPKHENQEKEN-----GTSESQRGFDKVV-RVATTLKNSPSVVHSLSQLNA 440
S+ GF S+ + +++ +E G + S G + V + LKN S L
Sbjct: 9 SEQVGFTRSNIEKDDESEEEIDLDLGFTISDDGVSEDVGTIVKLLKNCGSDRKELRNKLE 68
Query: 441 LRGVPPTGE-VLKIMCTVEDDWKACLSLFHWA---EPHAREKSEKVDLYHTLITILARHR 608
V P+ E V++I+ V +DW+ + F WA + + R E YH++I+IL + R
Sbjct: 69 ECDVKPSNELVVEILSQVRNDWETAFTFFVWAGKQQGYVRSVRE----YHSMISILGKMR 124
Query: 609 RFSLAWSMADKMKQ--QSMLSSQTMRIIIEGYIVAGDVSRAVRTFSNMEYFGPSPNYDDL 782
+F AW++ D+M++ S+++SQT+ I+I Y DV +A+ TF + F DD
Sbjct: 125 KFDTAWTLIDEMRKFSPSLVNSQTLLIMIRKYCAVHDVGKAINTFHAYKRFKLEMGIDDF 184
Query: 783 LSVLKMLCKHMYVEDAEILIDKNKKHFPLDIKSFNVLLDAWCNIVDDKREVKRVWEKLSD 962
S+L LC++ V DAE LI NK +P D KSFN++L+ WCN++ RE +RVW ++ +
Sbjct: 185 QSLLSALCRYKNVSDAEHLIFCNKDTYPFDAKSFNIVLNGWCNVIGSPREAERVWMEMGN 244
Query: 963 HCITPDAVSYMTVIPYYMKVDKFYDVVRLYSRMRKQGLIPNLDIVNSVISVLAKENCVIE 1142
+ D VSY ++I Y K V++L+ RM+K+ + P+ + N+VI LAK + V E
Sbjct: 245 VGVKHDVVSYSSMISCYSKGGSLNKVLKLFDRMKKESIEPDRKVYNAVIHALAKASFVSE 304
Query: 1143 AMNVFKSL-EELGLNPDAVTYTCIINLCCQTWKKNESSDMLEKMIGAGFSPPLEIHNSFF 1319
A N+ K++ EE G+ P+ VTY +I C+ K E+ + ++M+ G P + +++F
Sbjct: 305 ARNLMKTMEEEKGMEPNVVTYNSLIKPLCKARKTEEAKQVFDEMLEKGLFPTIRTYHAFM 364
Query: 1320 RFIEDGDSIFKHLVRMIKTG 1379
R + G+ +F+ L +M K G
Sbjct: 365 RILRTGEEVFELLAKMRKMG 384
>ref|XP_004305478.1| PREDICTED: pentatricopeptide repeat-containing protein At1g80880,
mitochondrial-like [Fragaria vesca subsp. vesca]
Length = 536
Score = 216 bits (550), Expect = 2e-53
Identities = 132/411 (32%), Positives = 206/411 (50%), Gaps = 1/411 (0%)
Frame = +3
Query: 117 LRILSSSRHSQTAINHSPY-TFLQNGFFLTQHPYRKTRWFPISYFVGYPPLKQLSSKNCG 293
LRI S + ++H P T + L H T P + L+ S G
Sbjct: 10 LRIKHPLYISLSLLHHQPISTSPSSSHSLHHHLSHPTPLIPSQTPRHFSTLRPFS----G 65
Query: 294 FCTSSPKHENQEKENGTSESQRGFDKVVRVATTLKNSPSVVHSLSQLNALRGVPPTGEVL 473
+ P N ++ N + G + + TT S +++ L+ VL
Sbjct: 66 QVLNHPLGFNAQRFNPDNTHNLGLTHFLELLTTSAGLASEAEAMAFLDESGVEAKRDTVL 125
Query: 474 KIMCTVEDDWKACLSLFHWAEPHAREKSEKVDLYHTLITILARHRRFSLAWSMADKMKQQ 653
+ + DWK F W E E L ++ +L HR+FS AW + + Q
Sbjct: 126 LAIWELRGDWKLAFLGFKWGEKRGCCDEEACSL---MVWVLGSHRKFSTAWCLIRDLNQA 182
Query: 654 SMLSSQTMRIIIEGYIVAGDVSRAVRTFSNMEYFGPSPNYDDLLSVLKMLCKHMYVEDAE 833
M + + M I+I+ Y A S+A++TF ME F SP+ + +L LCK+ +E+AE
Sbjct: 183 LMDTRRAMLIMIDRYASANHPSKAIKTFQIMEKFRLSPDQEAFHILLNALCKNGNMEEAE 242
Query: 834 ILIDKNKKHFPLDIKSFNVLLDAWCNIVDDKREVKRVWEKLSDHCITPDAVSYMTVIPYY 1013
+ +KK FPL+++ FN++LD WCNI D + KRVW ++S +CITPDA SY +I Y
Sbjct: 243 EFMLVSKKFFPLEVEGFNIVLDGWCNISVDVYQAKRVWREMSKYCITPDATSYTHMISCY 302
Query: 1014 MKVDKFYDVVRLYSRMRKQGLIPNLDIVNSVISVLAKENCVIEAMNVFKSLEELGLNPDA 1193
KV +D +RLY M+K+ +P L + NS+I VL +ENC EA+ V ++E+GL PDA
Sbjct: 303 SKVGILFDSLRLYDGMKKRDWVPGLKVYNSLIYVLTRENCYKEALKVLDKVKEMGLQPDA 362
Query: 1194 VTYTCIINLCCQTWKKNESSDMLEKMIGAGFSPPLEIHNSFFRFIEDGDSI 1346
TY +I C++ K E+ ML MI SP +E +++F + + +++
Sbjct: 363 TTYNSMIGPLCESKKLEEARQMLSTMINDNLSPTVETYHAFLQSADSTETL 413
>ref|XP_002525469.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223535282|gb|EEF36959.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 581
Score = 214 bits (546), Expect = 5e-53
Identities = 112/308 (36%), Positives = 179/308 (58%), Gaps = 4/308 (1%)
Frame = +3
Query: 468 VLKIMCTVEDDWKACLSLFHWAEPHAREKSEKVDLYHTLITILARHRRFSLAWSMADKMK 647
VL+++ + +DW+A + F WA S V YH +I+IL + R+F AW++ D+M+
Sbjct: 130 VLEVLSRIRNDWEAAFTFFLWAGRQLGY-SHSVREYHAMISILGKMRKFDTAWALIDEMR 188
Query: 648 QQ----SMLSSQTMRIIIEGYIVAGDVSRAVRTFSNMEYFGPSPNYDDLLSVLKMLCKHM 815
S+++ QT+ I+I Y DV RA+ TF + F D+ S+L LC++
Sbjct: 189 GVKTGISLVTPQTLLIMIRKYCAVHDVGRAINTFYAHKRFKFDLGIDEFQSLLSALCRYK 248
Query: 816 YVEDAEILIDKNKKHFPLDIKSFNVLLDAWCNIVDDKREVKRVWEKLSDHCITPDAVSYM 995
V+DAE L+ NK FP + KSFN++L+ WCN++ RE R+W ++ I D VSY
Sbjct: 249 NVQDAEHLMFCNKDVFPFNTKSFNIVLNGWCNVIGSPREADRIWREMCKRRIHYDVVSYA 308
Query: 996 TVIPYYMKVDKFYDVVRLYSRMRKQGLIPNLDIVNSVISVLAKENCVIEAMNVFKSLEEL 1175
++I Y K Y V +LY++M++ G+ P+ I NSVI LAK V EA+N+ K++EE
Sbjct: 309 SIISCYSKAGNLYKVFKLYNQMKEVGIEPDRKIYNSVIFALAKGRHVSEAINLMKTMEEK 368
Query: 1176 GLNPDAVTYTCIINLCCQTWKKNESSDMLEKMIGAGFSPPLEIHNSFFRFIEDGDSIFKH 1355
G+ P+ VTY +I C+ K +E+ + ++M+ G SP + +++FFR + G+ +F
Sbjct: 369 GIAPNTVTYNSLIKPLCRARKIDEARGLFDEMLQHGHSPTIRTYHAFFRSLRTGEEVFAL 428
Query: 1356 LVRMIKTG 1379
L M K G
Sbjct: 429 LENMRKLG 436
>ref|XP_004136099.1| PREDICTED: pentatricopeptide repeat-containing protein At1g80880,
mitochondrial-like [Cucumis sativus]
gi|449509164|ref|XP_004163514.1| PREDICTED:
pentatricopeptide repeat-containing protein At1g80880,
mitochondrial-like [Cucumis sativus]
Length = 547
Score = 214 bits (545), Expect = 7e-53
Identities = 112/325 (34%), Positives = 184/325 (56%)
Frame = +3
Query: 405 PSVVHSLSQLNALRGVPPTGEVLKIMCTVEDDWKACLSLFHWAEPHAREKSEKVDLYHTL 584
PS V +++ L+ V + + DDWK+ L F W E E +L +
Sbjct: 97 PSEVEAVAALDEFDVKADLDLVYSAIWVLRDDWKSSLLAFKWGEKVGAIDEEICNL---M 153
Query: 585 ITILARHRRFSLAWSMADKMKQQSMLSSQTMRIIIEGYIVAGDVSRAVRTFSNMEYFGPS 764
I +L H++FS AWS+ ++ + S Q M ++I+ Y A + S+A++TF ME F +
Sbjct: 154 IWVLGNHKKFSTAWSLIRELHGSLLNSMQAMLVMIDRYAYANEASKAIKTFHMMEKFRLT 213
Query: 765 PNYDDLLSVLKMLCKHMYVEDAEILIDKNKKHFPLDIKSFNVLLDAWCNIVDDKREVKRV 944
P+ + +L LCK+ +E+AE + NKK FPL +SFN++L+ WCN+ D E KR+
Sbjct: 214 PDQEAFHVLLNSLCKYGNIEEAEEFMFVNKKLFPLGTESFNIILNGWCNVTVDVFEAKRI 273
Query: 945 WEKLSDHCITPDAVSYMTVIPYYMKVDKFYDVVRLYSRMRKQGLIPNLDIVNSVISVLAK 1124
W ++S CI PD+ SY +I + K +D +R Y +M+K+ IP++++ NS+ VL +
Sbjct: 274 WREMSKCCILPDSTSYTHMISCFSKNGNLFDSLRFYDQMKKRDWIPSVEVYNSLAYVLTR 333
Query: 1125 ENCVIEAMNVFKSLEELGLNPDAVTYTCIINLCCQTWKKNESSDMLEKMIGAGFSPPLEI 1304
ENC EA+ + + ++E+GL PD+ TY +I+ C+ K +E+ D+L M SP +E
Sbjct: 334 ENCFNEALKILEKIKEVGLRPDSTTYNSLISPLCEAGKLDEAKDVLTMMTEDNISPTIET 393
Query: 1305 HNSFFRFIEDGDSIFKHLVRMIKTG 1379
++SF + D F+ L RM + G
Sbjct: 394 YHSFIQ-AADSKMSFELLKRMRQDG 417
>ref|XP_006400022.1| hypothetical protein EUTSA_v10015264mg [Eutrema salsugineum]
gi|557101112|gb|ESQ41475.1| hypothetical protein
EUTSA_v10015264mg [Eutrema salsugineum]
Length = 580
Score = 213 bits (541), Expect = 2e-52
Identities = 114/317 (35%), Positives = 185/317 (58%), Gaps = 7/317 (2%)
Frame = +3
Query: 450 VPPTGE-VLKIMCTVEDDWKACLSLFHWA---EPHAREKSEKVDLYHTLITILARHRRFS 617
V P+ E V++I+ +DW+ + F WA + + R E YH++I+IL + R+F
Sbjct: 128 VKPSNELVVEILSLARNDWETAFTFFVWAGKQQGYVRSVRE----YHSMISILGKMRKFD 183
Query: 618 LAWSMADKMKQ--QSMLSSQTMRIIIEGYIVAGDVSRAVRTFSNMEYFGPSPNYDDLLSV 791
AW++ D+M++ S+++SQT+ I+I Y DV +A+ TF + F DD S+
Sbjct: 184 TAWTLIDEMRKFSPSLVNSQTLLIMIRKYCAVHDVGKAINTFHAYKRFKLEMGIDDFQSL 243
Query: 792 LKMLCKHMYVEDAEILIDKNKKHFPLDIKSFNVLLDAWCNIVDDKREVKRVWEKLSDHCI 971
L LC++ V+DAE LI NK +P D KSFN++L+ WCN+V RE +RVW ++ + +
Sbjct: 244 LSALCRYKNVQDAEHLIFCNKDTYPFDAKSFNIVLNGWCNVVGSPREAERVWMEMGNVGV 303
Query: 972 TPDAVSYMTVIPYYMKVDKFYDVVRLYSRMRKQGLIPNLDIVNSVISVLAKENCVIEAMN 1151
D VSY ++I Y K V+RL+ RM+K+ + P+ N+V+ LAK V EAM+
Sbjct: 304 KHDVVSYSSLISCYSKGGNLNKVLRLFERMKKECIEPDRKAYNAVVHALAKARFVPEAMS 363
Query: 1152 VFKSLE-ELGLNPDAVTYTCIINLCCQTWKKNESSDMLEKMIGAGFSPPLEIHNSFFRFI 1328
+ KS+E E G+ P+ VTY +I C+ K E+ + E+M+ G P + +++F R +
Sbjct: 364 LMKSIEKEKGMKPNIVTYNSLIKPLCKARKTEEAKQVFEEMLEKGIFPTIRTYHAFMRIL 423
Query: 1329 EDGDSIFKHLVRMIKTG 1379
G+ +F+ L +M K G
Sbjct: 424 RTGEEVFELLAKMRKMG 440
>ref|XP_003624580.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355499595|gb|AES80798.1| Pentatricopeptide
repeat-containing protein [Medicago truncatula]
Length = 585
Score = 213 bits (541), Expect = 2e-52
Identities = 135/448 (30%), Positives = 234/448 (52%), Gaps = 19/448 (4%)
Frame = +3
Query: 93 NVKTFS-NLLRILSSSRHSQTAINHSPYTF--LQNGFFLTQHPYRKTRWFPISYFVGYPP 263
N+ FS LLRI RH+ +NH L N F + + + ++ ++F PP
Sbjct: 7 NLSVFSIALLRI----RHNAITVNHCDIVHKPLMNASF---NAFNSSNYY--TFFA--PP 55
Query: 264 LKQLSSKNCGFCTSSPKHENQEKENGTSESQR----------GFDKVVRVATTLKNSP-S 410
S + F S ++ +++G + + GF K V+ + + P S
Sbjct: 56 KFSFSVRF--FSAESSSDDDYNEDDGDDDHDKNSSQLHLRDDGFVKDVKTILDIIHKPGS 113
Query: 411 VVHSLSQLNALRGVPPTGE-VLKIMCTVEDDWKACLSLFHWAEPHAREKSEKVDLYHTLI 587
+ + Q V + E V++++ V +DW+A + F WA V YH++I
Sbjct: 114 GPYEIKQKLEDCNVKASSELVVEVLSRVRNDWEAAFTFFLWAGKQPGY-DHSVREYHSMI 172
Query: 588 TILARHRRFSLAWSMADKMKQ----QSMLSSQTMRIIIEGYIVAGDVSRAVRTFSNMEYF 755
++L + RRF AW++ ++M++ +S+++ QT+ I+I Y DV RA+ TF + F
Sbjct: 173 SVLGKMRRFDTAWALVEEMRRGKTGESIVTPQTLLIMIRKYCAVHDVGRAINTFYAFKRF 232
Query: 756 GPSPNYDDLLSVLKMLCKHMYVEDAEILIDKNKKHFPLDIKSFNVLLDAWCNIVDDKREV 935
+ +L LC++ V+DAE L+ NK FPLD KSFN++L+ WCN++ R
Sbjct: 233 NFQVGLYEFQGLLSALCRYKNVQDAEHLLFCNKNVFPLDTKSFNIILNGWCNLIVSARNA 292
Query: 936 KRVWEKLSDHCITPDAVSYMTVIPYYMKVDKFYDVVRLYSRMRKQGLIPNLDIVNSVISV 1115
+R+WE++S I D VSY ++I Y K K Y V++L+ +M+K+ + P+ + N+VI
Sbjct: 293 ERIWEEMSKRRIQHDVVSYASIISCYSKSSKLYRVLQLFEQMKKRNITPDRKVYNAVIFS 352
Query: 1116 LAKENCVIEAMNVFKSLEELGLNPDAVTYTCIINLCCQTWKKNESSDMLEKMIGAGFSPP 1295
LAK V EA+N+ +E+ + PDA+TY +I C+ K +E+ ++ M+ G SP
Sbjct: 353 LAKNRMVKEAVNLIIKMEDNNVTPDAITYNSLIKPLCKARKIDEAKEIFNVMLERGISPS 412
Query: 1296 LEIHNSFFRFIEDGDSIFKHLVRMIKTG 1379
+ ++FFR + + +F+ L +M + G
Sbjct: 413 IRTFHAFFRILRVKEEVFELLDKMKELG 440
>ref|XP_002275952.1| PREDICTED: pentatricopeptide repeat-containing protein At5g15010,
mitochondrial-like [Vitis vinifera]
Length = 566
Score = 213 bits (541), Expect = 2e-52
Identities = 112/355 (31%), Positives = 203/355 (57%), Gaps = 7/355 (1%)
Frame = +3
Query: 336 NGTSESQRGFDK--VVRVATTLKNSPSVVHSLSQLNALRGVPPTGE-VLKIMCTVEDDWK 506
NG S++ G + V R+ L+ S + + GV + E V++++ V + W+
Sbjct: 69 NGNSDTNNGENGEFVRRIVDILQEPGSSMSLVKHKLESCGVAASSELVVEVLSRVRNHWE 128
Query: 507 ACLSLFHWAEPHAREKSEKVDLYHTLITILARHRRFSLAWSMADKMKQ----QSMLSSQT 674
A + F WA + + YH++I+IL + R+F AW++ D+M+ S+++ T
Sbjct: 129 AAFTFFLWAAKQPGY-AHSLRAYHSMISILGKMRKFDTAWALIDEMRGGRTGTSLVTPHT 187
Query: 675 MRIIIEGYIVAGDVSRAVRTFSNMEYFGPSPNYDDLLSVLKMLCKHMYVEDAEILIDKNK 854
+ I+I Y DV +A+ TF + F ++ ++L LC++ V+DAE L+ N+
Sbjct: 188 LSIMIRRYCAVHDVGKAINTFYAHKQFKFGVGIEEFQNLLSALCRYKNVQDAEQLLFCNR 247
Query: 855 KHFPLDIKSFNVLLDAWCNIVDDKREVKRVWEKLSDHCITPDAVSYMTVIPYYMKVDKFY 1034
FP D KSFN++L+ WCN++ RE +R W ++S+ I D VSY ++I Y KV
Sbjct: 248 NVFPFDTKSFNIILNGWCNVIGSMREAERFWREMSNRGIQRDVVSYSSIISCYSKVTNLN 307
Query: 1035 DVVRLYSRMRKQGLIPNLDIVNSVISVLAKENCVIEAMNVFKSLEELGLNPDAVTYTCII 1214
V++L+++M++ + P+ + N+V+ LAK + V EA+N+ K++E G+ PD+VTY +I
Sbjct: 308 KVLKLFNQMKEMEIAPDRKVYNAVVHALAKASFVKEALNLMKAMEGKGIAPDSVTYNSLI 367
Query: 1215 NLCCQTWKKNESSDMLEKMIGAGFSPPLEIHNSFFRFIEDGDSIFKHLVRMIKTG 1379
+ K NE+ ++ ++M+ G SP + +++FFR ++ G+ +F L +M +TG
Sbjct: 368 KPLSRARKINEAKEVFDEMLQRGLSPTIRTYHAFFRILKSGEEVFMLLEKMKETG 422
>gb|EOY26078.1| Tetratricopeptide repeat (TPR)-like superfamily protein, putative
[Theobroma cacao]
Length = 554
Score = 211 bits (537), Expect = 6e-52
Identities = 104/308 (33%), Positives = 177/308 (57%), Gaps = 6/308 (1%)
Frame = +3
Query: 411 VVHSLSQLNALRGVPPTGE------VLKIMCTVEDDWKACLSLFHWAEPHAREKSEKVDL 572
V H S+ A+ + +G V ++ T+ ++W+ F W E +
Sbjct: 106 VAHFSSEAEAMASLDESGIKATQDLVYSVIGTLREEWRLAFLAFKWGEKCGNTGE---NT 162
Query: 573 YHTLITILARHRRFSLAWSMADKMKQQSMLSSQTMRIIIEGYIVAGDVSRAVRTFSNMEY 752
Y +I +L HR+F++AW + + + SM + + M I+I+ Y A D +A++TF ME
Sbjct: 163 YELMIWVLGNHRKFNMAWCLIRDLFRSSMDTRRAMFIMIDRYAAASDPCKAIQTFHTMEK 222
Query: 753 FGPSPNYDDLLSVLKMLCKHMYVEDAEILIDKNKKHFPLDIKSFNVLLDAWCNIVDDKRE 932
F +P+ + ++L LC++ YVE+AE ++ +NKK FPL+ FN++L+ WCNI+ D E
Sbjct: 223 FRMTPDEEAFRTLLNALCRYGYVEEAEEIMLQNKKLFPLETDGFNIVLNGWCNILVDVVE 282
Query: 933 VKRVWEKLSDHCITPDAVSYMTVIPYYMKVDKFYDVVRLYSRMRKQGLIPNLDIVNSVIS 1112
KRVW ++S +CI P+ SY +I + K +D +RLY+ M+K+G P +++ S++
Sbjct: 283 AKRVWREMSKYCIMPNGTSYTHMISCFSKDGNLFDSLRLYNEMKKRGWDPGIEVYKSLVY 342
Query: 1113 VLAKENCVIEAMNVFKSLEELGLNPDAVTYTCIINLCCQTWKKNESSDMLEKMIGAGFSP 1292
VL +ENC+ EA N+ K ++E GL PD+ TY +I C+ K E+ ++L M SP
Sbjct: 343 VLTRENCLNEAQNILKKMKETGLQPDSATYNSMIRPLCEAEKLEEARNILSTMKEENLSP 402
Query: 1293 PLEIHNSF 1316
+E +++F
Sbjct: 403 TIETYHAF 410
>ref|XP_002319140.2| pentatricopeptide repeat-containing family protein [Populus
trichocarpa] gi|550324994|gb|EEE95063.2|
pentatricopeptide repeat-containing family protein
[Populus trichocarpa]
Length = 518
Score = 211 bits (536), Expect = 8e-52
Identities = 113/310 (36%), Positives = 180/310 (58%), Gaps = 6/310 (1%)
Frame = +3
Query: 468 VLKIMCTVEDDWKACLSLFHWAEPHAREK--SEKVDLYHTLITILARHRRFSLAWSMADK 641
VL+++ V +DW+A + F WA AR+ + V YH++I+IL + R+F AW + D+
Sbjct: 58 VLEVLSRVRNDWEAAFTFFLWA---ARQPGYAHSVREYHSMISILGKMRKFDTAWVLIDE 114
Query: 642 MKQQ----SMLSSQTMRIIIEGYIVAGDVSRAVRTFSNMEYFGPSPNYDDLLSVLKMLCK 809
M+ S+++ QT+ I+I Y DV RA+ TF + F ++ S+L LC+
Sbjct: 115 MRGVKTGVSLVTPQTLLIMIRKYCAVHDVGRAINTFYAYKRFKFDMGIEEFQSLLSALCR 174
Query: 810 HMYVEDAEILIDKNKKHFPLDIKSFNVLLDAWCNIVDDKREVKRVWEKLSDHCITPDAVS 989
+ V+DAE L+ NK FPL+ KSFN++L+ WCN++ RE +RVW ++S I D VS
Sbjct: 175 YKNVQDAEQLMYCNKAVFPLNTKSFNIVLNGWCNLIGSPRESERVWREMSKRGIRFDVVS 234
Query: 990 YMTVIPYYMKVDKFYDVVRLYSRMRKQGLIPNLDIVNSVISVLAKENCVIEAMNVFKSLE 1169
Y +++ Y K Y V+RLY +M+K G+ P+ + N+VI LAK V EA N+ K++E
Sbjct: 235 YASMMSCYSKAGSLYRVLRLYKQMKKIGIEPDRKVYNAVIHALAKGRLVNEAFNLMKTME 294
Query: 1170 ELGLNPDAVTYTCIINLCCQTWKKNESSDMLEKMIGAGFSPPLEIHNSFFRFIEDGDSIF 1349
E G+ P+ VTY +I C+ K E+ + M+ SP + +++F R + G+ +F
Sbjct: 295 EKGVAPNIVTYNSLIKPLCRARKVEEAKGAFDDMLKRCISPTIRTYHAFLRILRTGEEVF 354
Query: 1350 KHLVRMIKTG 1379
L +M K G
Sbjct: 355 ALLEKMRKMG 364
>ref|XP_002319139.1| predicted protein [Populus trichocarpa]
Length = 518
Score = 211 bits (536), Expect = 8e-52
Identities = 113/310 (36%), Positives = 180/310 (58%), Gaps = 6/310 (1%)
Frame = +3
Query: 468 VLKIMCTVEDDWKACLSLFHWAEPHAREK--SEKVDLYHTLITILARHRRFSLAWSMADK 641
VL+++ V +DW+A + F WA AR+ + V YH++I+IL + R+F AW + D+
Sbjct: 58 VLEVLSRVRNDWEAAFTFFLWA---ARQPGYAHSVREYHSMISILGKMRKFDTAWVLIDE 114
Query: 642 MKQQ----SMLSSQTMRIIIEGYIVAGDVSRAVRTFSNMEYFGPSPNYDDLLSVLKMLCK 809
M+ S+++ QT+ I+I Y DV RA+ TF + F ++ S+L LC+
Sbjct: 115 MRGVKTGVSLVTPQTLLIMIRKYCAVHDVGRAINTFYAYKRFKFDMGIEEFQSLLSALCR 174
Query: 810 HMYVEDAEILIDKNKKHFPLDIKSFNVLLDAWCNIVDDKREVKRVWEKLSDHCITPDAVS 989
+ V+DAE L+ NK FPL+ KSFN++L+ WCN++ RE +RVW ++S I D VS
Sbjct: 175 YKNVQDAEQLMYCNKAVFPLNTKSFNIVLNGWCNLIGSPRESERVWREMSKRGIRFDVVS 234
Query: 990 YMTVIPYYMKVDKFYDVVRLYSRMRKQGLIPNLDIVNSVISVLAKENCVIEAMNVFKSLE 1169
Y +++ Y K Y V+RLY +M+K G+ P+ + N+VI LAK V EA N+ K++E
Sbjct: 235 YASMMSCYSKAGSLYRVLRLYKQMKKIGIEPDRKVYNAVIHALAKGRLVNEAFNLMKTME 294
Query: 1170 ELGLNPDAVTYTCIINLCCQTWKKNESSDMLEKMIGAGFSPPLEIHNSFFRFIEDGDSIF 1349
E G+ P+ VTY +I C+ K E+ + M+ SP + +++F R + G+ +F
Sbjct: 295 EKGVAPNIVTYNSLIKPLCRARKVEEAKGAFDDMLKRCISPTIRTYHAFLRILRTGEEVF 354
Query: 1350 KHLVRMIKTG 1379
L +M K G
Sbjct: 355 ALLEKMRKMG 364
>ref|NP_001168961.1| hypothetical protein [Zea mays] gi|223974035|gb|ACN31205.1| unknown
[Zea mays] gi|413921836|gb|AFW61768.1| hypothetical
protein ZEAMMB73_696968 [Zea mays]
Length = 521
Score = 210 bits (535), Expect = 1e-51
Identities = 103/271 (38%), Positives = 163/271 (60%)
Frame = +3
Query: 567 DLYHTLITILARHRRFSLAWSMADKMKQQSMLSSQTMRIIIEGYIVAGDVSRAVRTFSNM 746
+ +H + + RRF LAW + +M+ + +L+ + M I++E Y A +V++A++TF M
Sbjct: 137 EAWHLAVWAAGKARRFDLAWEIVRRMRNRGVLTCRVMVILMERYAAASEVNKAIKTFDVM 196
Query: 747 EYFGPSPNYDDLLSVLKMLCKHMYVEDAEILIDKNKKHFPLDIKSFNVLLDAWCNIVDDK 926
E F + S+L LCK +EDAE L+ KK FPL + FN++LD WCN++ D
Sbjct: 197 EKFKIESDQSVFYSLLHALCKIKNIEDAEELLFLRKKFFPLTAEGFNIILDGWCNVITDV 256
Query: 927 REVKRVWEKLSDHCITPDAVSYMTVIPYYMKVDKFYDVVRLYSRMRKQGLIPNLDIVNSV 1106
E KRVW ++S+HCITPD +SY +I + KV +D +R+Y M+K+G IP + + NS+
Sbjct: 257 AEAKRVWREMSNHCITPDGMSYTLMISCFSKVGNLFDTLRVYDEMKKRGWIPGIVVYNSL 316
Query: 1107 ISVLAKENCVIEAMNVFKSLEELGLNPDAVTYTCIINLCCQTWKKNESSDMLEKMIGAGF 1286
+ VL +ENCV +A N+F L + GL PD TY +I C++ K +E+ ++E MI G
Sbjct: 317 VYVLTRENCVKDAHNIFSKLTDEGLQPDVETYNNMIVPLCESCKLDEARKVMESMILRGI 376
Query: 1287 SPPLEIHNSFFRFIEDGDSIFKHLVRMIKTG 1379
P + +++F + E D K L +M + G
Sbjct: 377 VPTISTYHAFLK-QEGIDESLKLLQKMKEDG 406
>ref|XP_004235894.1| PREDICTED: pentatricopeptide repeat-containing protein At1g80880,
mitochondrial-like [Solanum lycopersicum]
Length = 542
Score = 210 bits (534), Expect = 1e-51
Identities = 110/291 (37%), Positives = 169/291 (58%), Gaps = 1/291 (0%)
Frame = +3
Query: 447 GVPPTGE-VLKIMCTVEDDWKACLSLFHWAEPHAREKSEKVDLYHTLITILARHRRFSLA 623
GV P E V ++ + D WK LF W E + K + + + +I IL H +FS A
Sbjct: 117 GVKPNQELVFLVIWELRDQWKLAYLLFKWGE---KCKCLEENTWCLMIWILGNHSKFSTA 173
Query: 624 WSMADKMKQQSMLSSQTMRIIIEGYIVAGDVSRAVRTFSNMEYFGPSPNYDDLLSVLKML 803
WS+ + Q S Q + I+I+ Y A + +A+ TF +E F SP+ LL+ L +L
Sbjct: 174 WSLIRDLLQMSTDIQQAVLIMIDRYAAADNAGKAIHTFQILEKFSMSPDQRTLLTFLNIL 233
Query: 804 CKHMYVEDAEILIDKNKKHFPLDIKSFNVLLDAWCNIVDDKREVKRVWEKLSDHCITPDA 983
CKH ++E+AE + NKK FPL+I FN++L+ WCNIV D E KRVW ++S CI P+
Sbjct: 234 CKHGFIEEAEEFMLINKKLFPLEIDGFNIILNGWCNIVVDIFEAKRVWREMSKCCIEPNG 293
Query: 984 VSYMTVIPYYMKVDKFYDVVRLYSRMRKQGLIPNLDIVNSVISVLAKENCVIEAMNVFKS 1163
SY +I + KV +D +RLY M+K+G +P L++ N+++ VL ENCV EA +
Sbjct: 294 TSYSHMISCFSKVRNLFDSLRLYDEMQKRGWVPGLEVYNALVYVLTCENCVKEAFKIIDK 353
Query: 1164 LEELGLNPDAVTYTCIINLCCQTWKKNESSDMLEKMIGAGFSPPLEIHNSF 1316
++ +GL PD+ TY +I C++ K +E+ +L M SP +E +++F
Sbjct: 354 VKHMGLRPDSSTYNLMICPLCESSKLDEARSILALMEEDNISPTIETYHAF 404
>ref|NP_001061426.1| Os08g0272200 [Oryza sativa Japonica Group]
gi|37806221|dbj|BAC99723.1| pentatricopeptide (PPR)
repeat-containing protein-like [Oryza sativa Japonica
Group] gi|37806377|dbj|BAC99889.1| pentatricopeptide
(PPR) repeat-containing protein-like [Oryza sativa
Japonica Group] gi|113623395|dbj|BAF23340.1| Os08g0272200
[Oryza sativa Japonica Group] gi|125602810|gb|EAZ42135.1|
hypothetical protein OsJ_26694 [Oryza sativa Japonica
Group]
Length = 528
Score = 210 bits (534), Expect = 1e-51
Identities = 116/348 (33%), Positives = 192/348 (55%), Gaps = 16/348 (4%)
Frame = +3
Query: 384 ATTLKNSPSVVHSLSQLNALR---GVPPTGE---VLKIMCTVEDDWKACLSLFHWAEPHA 545
A+T +SP H+LS L + G+PP +++ + + D A W E
Sbjct: 69 ASTAASSPK--HALSLLLSSPPSPGLPPASRRDLLVRALWELRRDPDAAALALRWGEEGC 126
Query: 546 REKSEKV----------DLYHTLITILARHRRFSLAWSMADKMKQQSMLSSQTMRIIIEG 695
E+ + +H I + RRF LAW++ +M ++ +L+S+ M I++E
Sbjct: 127 AAAGERAGPPPPPPPPAEAWHLTIWAAGKARRFDLAWAVVRRMLRRGVLTSRAMVIVMER 186
Query: 696 YIVAGDVSRAVRTFSNMEYFGPSPNYDDLLSVLKMLCKHMYVEDAEILIDKNKKHFPLDI 875
Y A +V++A++TF ME F + S+L+ LCK+ +EDAE L+ KK FPL
Sbjct: 187 YAAANEVNKAIKTFDAMEKFKTEADQTVFYSLLRALCKNKNIEDAEELLLVRKKFFPLTA 246
Query: 876 KSFNVLLDAWCNIVDDKREVKRVWEKLSDHCITPDAVSYMTVIPYYMKVDKFYDVVRLYS 1055
+ FN++LD WCN++ D E KR+W ++S++CITPD SY ++ + KV +D +R+Y
Sbjct: 247 EGFNIILDGWCNVITDIAEAKRIWREMSNYCITPDGTSYTLMVSCFAKVGNLFDTLRVYD 306
Query: 1056 RMRKQGLIPNLDIVNSVISVLAKENCVIEAMNVFKSLEELGLNPDAVTYTCIINLCCQTW 1235
M+K+G P++ + NS+I VL KENC+ + N+F + + GL P+ TY +I C++
Sbjct: 307 EMKKRGWTPSIAVYNSLIYVLTKENCMKDVQNIFTRIIDEGLQPNVKTYNSMIVPLCESR 366
Query: 1236 KKNESSDMLEKMIGAGFSPPLEIHNSFFRFIEDGDSIFKHLVRMIKTG 1379
K +E+ +LE M+ G P + +++F R E+ D K L +M G
Sbjct: 367 KLDEARMVLEDMMLKGIVPTILTYHTFLR-QENIDETLKFLKKMKDDG 413
>ref|XP_006387693.1| hypothetical protein POPTR_0671s00210g [Populus trichocarpa]
gi|550308165|gb|ERP46607.1| hypothetical protein
POPTR_0671s00210g [Populus trichocarpa]
Length = 599
Score = 209 bits (533), Expect = 2e-51
Identities = 112/310 (36%), Positives = 180/310 (58%), Gaps = 6/310 (1%)
Frame = +3
Query: 468 VLKIMCTVEDDWKACLSLFHWAEPHAREK--SEKVDLYHTLITILARHRRFSLAWSMADK 641
VL+++ V +DW+A + F WA AR+ + V YH++I+IL + R+F AW + D+
Sbjct: 139 VLEVLSRVRNDWEAAFTFFLWA---ARQPGYAHSVREYHSMISILGKMRKFDTAWVLIDE 195
Query: 642 MKQQ----SMLSSQTMRIIIEGYIVAGDVSRAVRTFSNMEYFGPSPNYDDLLSVLKMLCK 809
M+ S+++ QT+ I+I Y DV RA+ TF + F ++ S+L LC+
Sbjct: 196 MRGVKTGVSLVTPQTLLIMIRKYCAVHDVGRAINTFYAYKRFKFDMGIEEFQSLLSALCR 255
Query: 810 HMYVEDAEILIDKNKKHFPLDIKSFNVLLDAWCNIVDDKREVKRVWEKLSDHCITPDAVS 989
+ V+DAE L+ NK FPL+ KSFN++L+ WCN++ RE +RVW ++S I D VS
Sbjct: 256 YKNVQDAEQLMYCNKAVFPLNTKSFNIVLNGWCNLIGSPRESERVWREMSKRGIRFDVVS 315
Query: 990 YMTVIPYYMKVDKFYDVVRLYSRMRKQGLIPNLDIVNSVISVLAKENCVIEAMNVFKSLE 1169
Y +++ Y K Y V+RLY +M+K G+ P+ + N+VI LAK V EA N+ +++E
Sbjct: 316 YASMMSCYSKAGSLYRVLRLYKQMKKIGIEPDRKVYNAVIHALAKGRLVNEAFNLMRTME 375
Query: 1170 ELGLNPDAVTYTCIINLCCQTWKKNESSDMLEKMIGAGFSPPLEIHNSFFRFIEDGDSIF 1349
E G+ P+ VTY +I C+ K E+ + M+ SP + +++F R + G+ +F
Sbjct: 376 EKGVAPNIVTYNSLIKPLCRARKVEEAKGAFDDMLKRCISPTIRTYHAFLRILRTGEEVF 435
Query: 1350 KHLVRMIKTG 1379
L +M K G
Sbjct: 436 ALLEKMRKMG 445
>ref|NP_197005.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|223635761|sp|Q9LFQ4.2|PP383_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At5g15010, mitochondrial; Flags: Precursor
gi|332004721|gb|AED92104.1| pentatricopeptide
repeat-containing protein [Arabidopsis thaliana]
Length = 572
Score = 209 bits (533), Expect = 2e-51
Identities = 110/317 (34%), Positives = 185/317 (58%), Gaps = 7/317 (2%)
Frame = +3
Query: 450 VPPTGE-VLKIMCTVEDDWKACLSLFHWA---EPHAREKSEKVDLYHTLITILARHRRFS 617
V P+ E V++I+ V +DW+ + F WA + + R E YH++I+IL + R+F
Sbjct: 123 VKPSNELVVEILSRVRNDWETAFTFFVWAGKQQGYVRSVRE----YHSMISILGKMRKFD 178
Query: 618 LAWSMADKMKQ--QSMLSSQTMRIIIEGYIVAGDVSRAVRTFSNMEYFGPSPNYDDLLSV 791
AW++ D+M++ S+++SQT+ I+I Y DV +A+ TF + F DD S+
Sbjct: 179 TAWTLIDEMRKFSPSLVNSQTLLIMIRKYCAVHDVGKAINTFHAYKRFKLEMGIDDFQSL 238
Query: 792 LKMLCKHMYVEDAEILIDKNKKHFPLDIKSFNVLLDAWCNIVDDKREVKRVWEKLSDHCI 971
L LC++ V DA LI NK +P D KSFN++L+ WCN++ RE +RVW ++ + +
Sbjct: 239 LSALCRYKNVSDAGHLIFCNKDKYPFDAKSFNIVLNGWCNVIGSPREAERVWMEMGNVGV 298
Query: 972 TPDAVSYMTVIPYYMKVDKFYDVVRLYSRMRKQGLIPNLDIVNSVISVLAKENCVIEAMN 1151
D VSY ++I Y K V++L+ RM+K+ + P+ + N+V+ LAK + V EA N
Sbjct: 299 KHDVVSYSSMISCYSKGGSLNKVLKLFDRMKKECIEPDRKVYNAVVHALAKASFVSEARN 358
Query: 1152 VFKSL-EELGLNPDAVTYTCIINLCCQTWKKNESSDMLEKMIGAGFSPPLEIHNSFFRFI 1328
+ K++ EE G+ P+ VTY +I C+ K E+ + ++M+ G P + +++F R +
Sbjct: 359 LMKTMEEEKGIEPNVVTYNSLIKPLCKARKTEEAKQVFDEMLEKGLFPTIRTYHAFMRIL 418
Query: 1329 EDGDSIFKHLVRMIKTG 1379
G+ +F+ L +M K G
Sbjct: 419 RTGEEVFELLAKMRKMG 435
>emb|CAC01820.1| putative protein [Arabidopsis thaliana]
Length = 532
Score = 209 bits (533), Expect = 2e-51
Identities = 110/317 (34%), Positives = 185/317 (58%), Gaps = 7/317 (2%)
Frame = +3
Query: 450 VPPTGE-VLKIMCTVEDDWKACLSLFHWA---EPHAREKSEKVDLYHTLITILARHRRFS 617
V P+ E V++I+ V +DW+ + F WA + + R E YH++I+IL + R+F
Sbjct: 83 VKPSNELVVEILSRVRNDWETAFTFFVWAGKQQGYVRSVRE----YHSMISILGKMRKFD 138
Query: 618 LAWSMADKMKQ--QSMLSSQTMRIIIEGYIVAGDVSRAVRTFSNMEYFGPSPNYDDLLSV 791
AW++ D+M++ S+++SQT+ I+I Y DV +A+ TF + F DD S+
Sbjct: 139 TAWTLIDEMRKFSPSLVNSQTLLIMIRKYCAVHDVGKAINTFHAYKRFKLEMGIDDFQSL 198
Query: 792 LKMLCKHMYVEDAEILIDKNKKHFPLDIKSFNVLLDAWCNIVDDKREVKRVWEKLSDHCI 971
L LC++ V DA LI NK +P D KSFN++L+ WCN++ RE +RVW ++ + +
Sbjct: 199 LSALCRYKNVSDAGHLIFCNKDKYPFDAKSFNIVLNGWCNVIGSPREAERVWMEMGNVGV 258
Query: 972 TPDAVSYMTVIPYYMKVDKFYDVVRLYSRMRKQGLIPNLDIVNSVISVLAKENCVIEAMN 1151
D VSY ++I Y K V++L+ RM+K+ + P+ + N+V+ LAK + V EA N
Sbjct: 259 KHDVVSYSSMISCYSKGGSLNKVLKLFDRMKKECIEPDRKVYNAVVHALAKASFVSEARN 318
Query: 1152 VFKSL-EELGLNPDAVTYTCIINLCCQTWKKNESSDMLEKMIGAGFSPPLEIHNSFFRFI 1328
+ K++ EE G+ P+ VTY +I C+ K E+ + ++M+ G P + +++F R +
Sbjct: 319 LMKTMEEEKGIEPNVVTYNSLIKPLCKARKTEEAKQVFDEMLEKGLFPTIRTYHAFMRIL 378
Query: 1329 EDGDSIFKHLVRMIKTG 1379
G+ +F+ L +M K G
Sbjct: 379 RTGEEVFELLAKMRKMG 395
>ref|NP_178203.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75200729|sp|Q9SAH2.1|PP137_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At1g80880, mitochondrial; Flags: Precursor
gi|6503300|gb|AAF14676.1|AC011713_24 Contains PF|01535
Domain of unknown function [Arabidopsis thaliana]
gi|91806121|gb|ABE65789.1| pentatricopeptide
repeat-containing protein [Arabidopsis thaliana]
gi|332198342|gb|AEE36463.1| pentatricopeptide
repeat-containing protein [Arabidopsis thaliana]
Length = 540
Score = 208 bits (530), Expect = 4e-51
Identities = 124/415 (29%), Positives = 212/415 (51%)
Frame = +3
Query: 84 QGRNVKTFSNLLRILSSSRHSQTAINHSPYTFLQNGFFLTQHPYRKTRWFPISYFVGYPP 263
Q R V+ S L R +S+S S + NHS + F H + + +SY
Sbjct: 16 QWRIVQHQSLLRRAVSTSFSSSVSQNHS----FSSAFHRAGHVHSQV----LSY------ 61
Query: 264 LKQLSSKNCGFCTSSPKHENQEKENGTSESQRGFDKVVRVATTLKNSPSVVHSLSQLNAL 443
L +S N F T + + ++G ++R + L++ + SL +
Sbjct: 62 LPHFASSN-RFSTKTISETFDINLTALAPLEKGLIDLIRQVSELESEADAMASLEDSSFD 120
Query: 444 RGVPPTGEVLKIMCTVEDDWKACLSLFHWAEPHAREKSEKVDLYHTLITILARHRRFSLA 623
++ + D+W+ F W E + + DL +I +L H++F++A
Sbjct: 121 LN---HDSFYSLIWELRDEWRLAFLAFKWGEKRGCDDQKSCDL---MIWVLGNHQKFNIA 174
Query: 624 WSMADKMKQQSMLSSQTMRIIIEGYIVAGDVSRAVRTFSNMEYFGPSPNYDDLLSVLKML 803
W + M S + + M ++++ Y A D S+A+RTF M+ F +P + +L L
Sbjct: 175 WCLIRDMFNVSKDTRKAMFLMMDRYAAANDTSQAIRTFDIMDKFKHTPYDEAFQGLLCAL 234
Query: 804 CKHMYVEDAEILIDKNKKHFPLDIKSFNVLLDAWCNIVDDKREVKRVWEKLSDHCITPDA 983
C+H ++E AE + +KK FP+D++ FNV+L+ WCNI D E KR+W ++ ++CITP+
Sbjct: 235 CRHGHIEKAEEFMLASKKLFPVDVEGFNVILNGWCNIWTDVTEAKRIWREMGNYCITPNK 294
Query: 984 VSYMTVIPYYMKVDKFYDVVRLYSRMRKQGLIPNLDIVNSVISVLAKENCVIEAMNVFKS 1163
SY +I + KV +D +RLY M+K+GL P +++ NS++ VL +E+C EAM + K
Sbjct: 295 DSYSHMISCFSKVGNLFDSLRLYDEMKKRGLAPGIEVYNSLVYVLTREDCFDEAMKLMKK 354
Query: 1164 LEELGLNPDAVTYTCIINLCCQTWKKNESSDMLEKMIGAGFSPPLEIHNSFFRFI 1328
L E GL PD+VTY +I C+ K + + ++L MI SP ++ ++F +
Sbjct: 355 LNEEGLKPDSVTYNSMIRPLCEAGKLDVARNVLATMISENLSPTVDTFHAFLEAV 409