BLASTX nr result

ID: Ephedra25_contig00024749 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra25_contig00024749
         (720 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002302559.2| hypothetical protein POPTR_0002s15440g [Popu...    58   3e-06

>ref|XP_002302559.2| hypothetical protein POPTR_0002s15440g [Populus trichocarpa]
           gi|550345084|gb|EEE81832.2| hypothetical protein
           POPTR_0002s15440g [Populus trichocarpa]
          Length = 169

 Score = 57.8 bits (138), Expect = 3e-06
 Identities = 53/171 (30%), Positives = 77/171 (45%), Gaps = 6/171 (3%)
 Frame = +2

Query: 101 PPSLETLLNSLETATQMAKYLPNCDSNDQIVHIFNSLSHAHHTIQSFL-ENHLHKTTQNN 277
           PP L  L+ SLE AT MAK LP+      ++ I++SL HAHH + SFL +NH   +    
Sbjct: 8   PPPLPDLILSLEQATLMAKQLPSTTDPTHLLQIYSSLHHAHHHLSSFLSQNHQLPSF--- 64

Query: 278 GPNTLQTTPLNNGETTDHKCIQNTDLTMAXXXXXXXXXXXVGILR--EYIANDFSLCSKR 451
               LQ  P  N  ++     +N D  M            V  +   E    D  + +KR
Sbjct: 65  ---PLQPPPQENSLSSATGADENGDEPMQVGDDDEENSNKVVSIEKVEEGMRDCFIKNKR 121

Query: 452 RKRNNTISFEPDAMACRRRPKKHQEGY--AIPSNYYREWQ-RSLDLVFQFH 595
            KR       P  +A     + + +G+   I     RE + R+LDL++QFH
Sbjct: 122 PKR----PLSPSTVAVAEERRLYDDGFGGGIVGFDPRETRLRALDLIYQFH 168


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