BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra25_contig00024655
         (413 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006845708.1| hypothetical protein AMTR_s00019p00240430 [A...    47   9e-08
ref|XP_006280485.1| hypothetical protein CARUB_v10026422mg [Caps...    40   8e-07
gb|EOX94582.1| Primosome PriB/single-strand DNA-binding, putativ...    40   3e-06

>ref|XP_006845708.1| hypothetical protein AMTR_s00019p00240430 [Amborella trichopoda]
           gi|548848280|gb|ERN07383.1| hypothetical protein
           AMTR_s00019p00240430 [Amborella trichopoda]
          Length = 500

 Score = 47.4 bits (111), Expect(2) = 9e-08
 Identities = 26/59 (44%), Positives = 35/59 (59%)
 Frame = +2

Query: 236 HPDFVNKDTREAL*IDTKKNPAWVTPMLHSLQNEVFAISHSTDYLWKILFAEPSKWFDN 412
           HPDF +K+T EAL +D  K   WV   L +L+ +         +LW+ LFA+PSKW DN
Sbjct: 326 HPDFKHKETGEALWLDGPK-AEWVLSKLKTLEIDQ---RQDKGHLWEDLFADPSKWCDN 380



 Score = 34.3 bits (77), Expect(2) = 9e-08
 Identities = 17/35 (48%), Positives = 21/35 (60%), Gaps = 7/35 (20%)
 Frame = +3

Query: 51  FAHAPSIEDL-------WKILFADPSKWLDNREGK 134
           FA+   IE +       W+ LFADPSKW DNR+ K
Sbjct: 287 FANGQKIEKIRADIGHRWEDLFADPSKWCDNRKVK 321



 Score = 45.8 bits (107), Expect(2) = 2e-07
 Identities = 27/59 (45%), Positives = 34/59 (57%)
 Frame = +2

Query: 236 HPDFVNKDTREAL*IDTKKNPAWVTPMLHSLQNEVFAISHSTDYLWKILFAEPSKWFDN 412
           HPDF +K+T EAL +D  K P WV   L +L+ +      S D LWK L A   KW+DN
Sbjct: 389 HPDFKHKETGEALWLDGIK-PEWVLSKLKTLEIDQRQNKDSND-LWKDLVANRDKWWDN 445



 Score = 35.0 bits (79), Expect(2) = 2e-07
 Identities = 14/19 (73%), Positives = 16/19 (84%)
 Frame = +3

Query: 78  LWKILFADPSKWLDNREGK 134
           LW+ LFADPSKW DNR+ K
Sbjct: 366 LWEDLFADPSKWCDNRKVK 384


>ref|XP_006280485.1| hypothetical protein CARUB_v10026422mg [Capsella rubella]
           gi|482549189|gb|EOA13383.1| hypothetical protein
           CARUB_v10026422mg [Capsella rubella]
          Length = 437

 Score = 39.7 bits (91), Expect(2) = 8e-07
 Identities = 21/52 (40%), Positives = 26/52 (50%), Gaps = 7/52 (13%)
 Frame = +3

Query: 6   PAWALYKVNSLGREVFAHAPSI-------EDLWKILFADPSKWLDNREGKVN 140
           P WAL K++ L  +VF     I       E+ WK L  +P KW DNR  K N
Sbjct: 273 PDWALLKLDELEFDVFVPNGDIKLKQLKGEESWKDLVQNPDKWFDNRSEKTN 324



 Score = 38.9 bits (89), Expect(2) = 8e-07
 Identities = 26/72 (36%), Positives = 36/72 (50%), Gaps = 8/72 (11%)
 Frame = +2

Query: 221 QKSN-KHPDFVNKDTREAL*IDTKKNPAWVTPMLHSLQNEV-------FAISHSTDYLWK 376
           +K+N K PDF +K+T EAL +    +P WV   L  L+              H  +  WK
Sbjct: 321 EKTNVKAPDFKHKETGEALWMTD--SPIWVLSKLPPLKKNQERPLMSNTVSLHKKEESWK 378

Query: 377 ILFAEPSKWFDN 412
            L  +PSKW+DN
Sbjct: 379 NLVEDPSKWWDN 390


>gb|EOX94582.1| Primosome PriB/single-strand DNA-binding, putative isoform 1
           [Theobroma cacao]
          Length = 289

 Score = 39.7 bits (91), Expect(2) = 3e-06
 Identities = 18/40 (45%), Positives = 26/40 (65%)
 Frame = +2

Query: 221 QKSNKHPDFVNKDTREAL*IDTKKNPAWVTPMLHSLQNEV 340
           ++S K+PDF +KDT EAL I+ + NP WV   L  L + +
Sbjct: 228 KRSPKYPDFKHKDTGEALWIEGRNNPHWVKSQLEILDSRM 267



 Score = 37.0 bits (84), Expect(2) = 3e-06
 Identities = 14/32 (43%), Positives = 22/32 (68%)
 Frame = +3

Query: 39  GREVFAHAPSIEDLWKILFADPSKWLDNREGK 134
           G  V  +  S+E+LW+  FA+P++W DNR+ K
Sbjct: 197 GGNVVNNMGSVEELWQAFFANPTEWWDNRKNK 228