BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra25_contig00024582
         (636 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002880603.1| ubiquitin carboxyl-terminal hydrolase family...    62   2e-07
ref|XP_006293755.1| hypothetical protein CARUB_v10022714mg [Caps...    60   4e-07
dbj|BAD95379.1| putative ubiquitin carboxyl terminal hydrolase [...    56   8e-06
ref|NP_565576.1| ubiquitin carboxyl-terminal hydrolase 19 [Arabi...    56   8e-06

>ref|XP_002880603.1| ubiquitin carboxyl-terminal hydrolase family protein [Arabidopsis
           lyrata subsp. lyrata] gi|297326442|gb|EFH56862.1|
           ubiquitin carboxyl-terminal hydrolase family protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 650

 Score = 61.6 bits (148), Expect = 2e-07
 Identities = 42/128 (32%), Positives = 61/128 (47%), Gaps = 7/128 (5%)
 Frame = -2

Query: 572 FGWSEELMRLCRELPLPLANVECSCYVNSVLQCLAWTAPLVARCKGGCHLTPRNNELQSS 393
           + W   +M  C      L N   SC+ N VLQCL+WT PLVA      +L  R ++ +  
Sbjct: 164 YNWDRPIMAPCG-----LTNCGNSCFANVVLQCLSWTRPLVA------YLLERGHKRECR 212

Query: 392 LGSTMLHC-----TDKDNHS--AFTPMRLLNEMSHSLGPNFDGHTQQDAMELFNSLVVMC 234
                  C      D+ NHS   F+PM +++ +  ++G N     Q+DA EL  S + M 
Sbjct: 213 RNDWCFFCEFENHLDRANHSRFPFSPMNIISRLP-NIGGNLGYGRQEDAHELMRSAIDMM 271

Query: 233 PSLLSDEF 210
            S+  DEF
Sbjct: 272 QSVCLDEF 279


>ref|XP_006293755.1| hypothetical protein CARUB_v10022714mg [Capsella rubella]
           gi|482562463|gb|EOA26653.1| hypothetical protein
           CARUB_v10022714mg [Capsella rubella]
          Length = 736

 Score = 60.5 bits (145), Expect = 4e-07
 Identities = 42/128 (32%), Positives = 60/128 (46%), Gaps = 7/128 (5%)
 Frame = -2

Query: 572 FGWSEELMRLCRELPLPLANVECSCYVNSVLQCLAWTAPLVARCKGGCHLTPRNNELQSS 393
           F W   +M  C      L N   SC+ N VLQCL+WT PLVA      +L  R ++ +  
Sbjct: 165 FNWDRPIMAPCG-----LTNCGNSCFANVVLQCLSWTRPLVA------YLLDRGHKRECR 213

Query: 392 LGSTMLHC-----TDKDNHS--AFTPMRLLNEMSHSLGPNFDGHTQQDAMELFNSLVVMC 234
                  C      D+ NHS   F+PM +++ +  ++G N     Q+DA EL    + M 
Sbjct: 214 RNEWCFFCEFESHLDRANHSRDPFSPMNIISRLP-NIGGNLGYGRQEDAHELMRFAIDMM 272

Query: 233 PSLLSDEF 210
            S+  DEF
Sbjct: 273 QSVCLDEF 280


>dbj|BAD95379.1| putative ubiquitin carboxyl terminal hydrolase [Arabidopsis
           thaliana] gi|227202736|dbj|BAH56841.1| AT2G24640
           [Arabidopsis thaliana]
          Length = 418

 Score = 56.2 bits (134), Expect = 8e-06
 Identities = 40/128 (31%), Positives = 60/128 (46%), Gaps = 7/128 (5%)
 Frame = -2

Query: 572 FGWSEELMRLCRELPLPLANVECSCYVNSVLQCLAWTAPLVARCKGGCHLTPRNNELQSS 393
           + W   +M  C      L N   SC+ N VLQCL+WT PLVA      +L  R ++ +  
Sbjct: 164 YNWDRPIMAPCG-----LTNCGNSCFANVVLQCLSWTRPLVA------YLLERGHKRECR 212

Query: 392 LGSTMLHC-----TDKDNHS--AFTPMRLLNEMSHSLGPNFDGHTQQDAMELFNSLVVMC 234
                  C      D+ N+S   F+PM +++ +  ++G N     Q+DA EL    + M 
Sbjct: 213 RNDWCFLCEFENHLDRANYSRFPFSPMNIISRLP-NIGGNLGYGRQEDAHELMRFAIDMM 271

Query: 233 PSLLSDEF 210
            S+  DEF
Sbjct: 272 QSVCLDEF 279


>ref|NP_565576.1| ubiquitin carboxyl-terminal hydrolase 19 [Arabidopsis thaliana]
           gi|75265927|sp|Q9SJA1.2|UBP19_ARATH RecName:
           Full=Ubiquitin carboxyl-terminal hydrolase 19; AltName:
           Full=Deubiquitinating enzyme 19; Short=AtUBP19; AltName:
           Full=Ubiquitin thioesterase 19; AltName:
           Full=Ubiquitin-specific-processing protease 19
           gi|13430806|gb|AAK26025.1|AF360315_1 putative ubiquitin
           carboxyl terminal hydrolase [Arabidopsis thaliana]
           gi|15810655|gb|AAL07252.1| putative ubiquitin carboxyl
           terminal hydrolase [Arabidopsis thaliana]
           gi|20197976|gb|AAD23896.2| putative ubiquitin carboxyl
           terminal hydrolase [Arabidopsis thaliana]
           gi|330252513|gb|AEC07607.1| ubiquitin carboxyl-terminal
           hydrolase 19 [Arabidopsis thaliana]
          Length = 672

 Score = 56.2 bits (134), Expect = 8e-06
 Identities = 40/128 (31%), Positives = 60/128 (46%), Gaps = 7/128 (5%)
 Frame = -2

Query: 572 FGWSEELMRLCRELPLPLANVECSCYVNSVLQCLAWTAPLVARCKGGCHLTPRNNELQSS 393
           + W   +M  C      L N   SC+ N VLQCL+WT PLVA      +L  R ++ +  
Sbjct: 164 YNWDRPIMAPCG-----LTNCGNSCFANVVLQCLSWTRPLVA------YLLERGHKRECR 212

Query: 392 LGSTMLHC-----TDKDNHS--AFTPMRLLNEMSHSLGPNFDGHTQQDAMELFNSLVVMC 234
                  C      D+ N+S   F+PM +++ +  ++G N     Q+DA EL    + M 
Sbjct: 213 RNDWCFLCEFENHLDRANYSRFPFSPMNIISRLP-NIGGNLGYGRQEDAHELMRFAIDMM 271

Query: 233 PSLLSDEF 210
            S+  DEF
Sbjct: 272 QSVCLDEF 279