BLASTX nr result
ID: Ephedra25_contig00024561
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra25_contig00024561
(553 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|YP_002519996.1| hypothetical protein EpeqC_p062 (chloroplast... 126 4e-27
ref|YP_002519742.1| hypothetical protein GnpaC_p015 [Gnetum parv... 80 3e-13
ref|YP_002519736.1| hypothetical protein GnpaC_p007 [Gnetum parv... 80 3e-13
dbj|BAH11177.1| hypothetical protein (chloroplast) [Welwitschia ... 78 2e-12
ref|YP_001876619.1| hypothetical chloroplast RF2 [Welwitschia mi... 78 2e-12
>ref|YP_002519996.1| hypothetical protein EpeqC_p062 (chloroplast) [Ephedra equisetina]
gi|222139940|ref|YP_002520008.1| hypothetical protein
EpeqC_p074 (chloroplast) [Ephedra equisetina]
gi|220983597|dbj|BAH11364.1| hypothetical protein
(chloroplast) [Ephedra equisetina]
gi|220983609|dbj|BAH11376.1| hypothetical protein
(chloroplast) [Ephedra equisetina]
Length = 2125
Score = 126 bits (316), Expect = 4e-27
Identities = 60/68 (88%), Positives = 63/68 (92%)
Frame = -1
Query: 226 FFSSFCKERLFHFCRLKPIVLKRIDKLTLLLTNPNQISANNTFAFAQSLFSELHKNRLGN 47
FFSSFCKERLFHFCRLKPIVLKR D+ TLLLTNPNQ+SANNTFAFAQSLF ELHKNRLGN
Sbjct: 314 FFSSFCKERLFHFCRLKPIVLKRTDRFTLLLTNPNQVSANNTFAFAQSLFYELHKNRLGN 373
Query: 46 QIFDTDKQ 23
QIFD K+
Sbjct: 374 QIFDHRKK 381
>ref|YP_002519742.1| hypothetical protein GnpaC_p015 [Gnetum parvifolium]
gi|512721616|ref|YP_008082235.1| hypothetical protein
(chloroplast) [Gnetum montanum]
gi|512721622|ref|YP_008082241.1| hypothetical protein
(chloroplast) [Gnetum montanum]
gi|220983484|dbj|BAH11252.1| hypothetical protein
(chloroplast) [Gnetum parvifolium]
gi|490345061|gb|AGL11081.1| hypothetical protein
(chloroplast) [Gnetum montanum]
gi|490345067|gb|AGL11087.1| hypothetical protein
(chloroplast) [Gnetum montanum]
Length = 2185
Score = 80.1 bits (196), Expect = 3e-13
Identities = 42/70 (60%), Positives = 49/70 (70%), Gaps = 2/70 (2%)
Frame = -1
Query: 226 FFSSFCKERLFHFCRLKPIVLKRIDKLTLLLTNPNQISANNTF--AFAQSLFSELHKNRL 53
F SSFCKE LF FCRLKPIVLKR D+ TL LTNP+Q+SAN + + LF EL K +L
Sbjct: 349 FCSSFCKELLFGFCRLKPIVLKRTDRFTLSLTNPSQVSANTSAFDIYYSKLFDELQKQKL 408
Query: 52 GNQIFDTDKQ 23
NQIF K+
Sbjct: 409 WNQIFHHRKK 418
>ref|YP_002519736.1| hypothetical protein GnpaC_p007 [Gnetum parvifolium]
gi|220983478|dbj|BAH11246.1| hypothetical protein
(chloroplast) [Gnetum parvifolium]
Length = 2185
Score = 80.1 bits (196), Expect = 3e-13
Identities = 42/70 (60%), Positives = 49/70 (70%), Gaps = 2/70 (2%)
Frame = -1
Query: 226 FFSSFCKERLFHFCRLKPIVLKRIDKLTLLLTNPNQISANNTF--AFAQSLFSELHKNRL 53
F SSFCKE LF FCRLKPIVLKR D+ TL LTNP+Q+SAN + + LF EL K +L
Sbjct: 349 FCSSFCKELLFGFCRLKPIVLKRTDRFTLSLTNPSQVSANTSAFDIYYSKLFDELQKQKL 408
Query: 52 GNQIFDTDKQ 23
NQIF K+
Sbjct: 409 WNQIFHHRKK 418
>dbj|BAH11177.1| hypothetical protein (chloroplast) [Welwitschia mirabilis]
gi|220983417|dbj|BAH11186.1| hypothetical protein
(chloroplast) [Welwitschia mirabilis]
Length = 2266
Score = 77.8 bits (190), Expect = 2e-12
Identities = 46/81 (56%), Positives = 52/81 (64%), Gaps = 3/81 (3%)
Frame = -1
Query: 271 SQSNKTGFLFCLGIFFFSSFCKERLFHFCRLKPIVLKRIDKLTLLLTNPNQISANNTFAF 92
SQ + FL FFSSFCKE LFHFCRLKPIVLKR D+ TL LTNP+++SA TFAF
Sbjct: 313 SQRDINQFLCSRLNLFFSSFCKELLFHFCRLKPIVLKRTDRFTLSLTNPSRVSA-KTFAF 371
Query: 91 ---AQSLFSELHKNRLGNQIF 38
L E+ R NQIF
Sbjct: 372 DIETPHLSYEIPYKRFWNQIF 392
>ref|YP_001876619.1| hypothetical chloroplast RF2 [Welwitschia mirabilis]
gi|187763154|ref|YP_001876628.1| hypothetical
chloroplast RF2 [Welwitschia mirabilis]
gi|163311674|gb|ABY26832.1| hypothetical chloroplast RF2
[Welwitschia mirabilis] gi|163311684|gb|ABY26842.1|
hypothetical chloroplast RF2 [Welwitschia mirabilis]
Length = 2266
Score = 77.8 bits (190), Expect = 2e-12
Identities = 46/81 (56%), Positives = 52/81 (64%), Gaps = 3/81 (3%)
Frame = -1
Query: 271 SQSNKTGFLFCLGIFFFSSFCKERLFHFCRLKPIVLKRIDKLTLLLTNPNQISANNTFAF 92
SQ + FL FFSSFCKE LFHFCRLKPIVLKR D+ TL LTNP+++SA TFAF
Sbjct: 313 SQRDINQFLCSRLNLFFSSFCKELLFHFCRLKPIVLKRTDRFTLSLTNPSRVSA-KTFAF 371
Query: 91 ---AQSLFSELHKNRLGNQIF 38
L E+ R NQIF
Sbjct: 372 DIETPHLSYEIPYKRFWNQIF 392